Characterization of domain-peptide interaction interface: Prediction of SH3 domain-mediated protein-protein interaction network in yeast by generic structure-based models

Journal of Proteome Research

Volumn 11, Issue 5, 2012, Pages 2982-2995

  Hou, Tingjun ^a   Li, Nan ^b   Li, Youyong ^a   Wang, Wei ^b  

^a SOOCHOW UNIVERSITY   (China)

^b UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

binding interface; MM GBSA; molecular dynamics; molecular interaction energy component (MIEC); protein recognition code; support vector machine (SVM)

Indexed keywords

PROTEIN SH3; PROTEOME;

ARTICLE; BINDING SITE; COMPUTER ANALYSIS; CONTROLLED STUDY; NONHUMAN; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN BINDING; PROTEIN DOMAIN; PROTEIN PROTEIN INTERACTION; PROTEIN STRUCTURE; YEAST;

AMINO ACID MOTIFS; AMINO ACID SEQUENCE; BINDING SITES; COMPUTER SIMULATION; FUNGAL PROTEINS; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; MULTIPROTEIN COMPLEXES; PROTEIN INTERACTION MAPS; SACCHAROMYCES CEREVISIAE; SENSITIVITY AND SPECIFICITY; SEQUENCE ALIGNMENT; SEQUENCE HOMOLOGY, AMINO ACID; SRC HOMOLOGY DOMAINS; SUBSTRATE SPECIFICITY; SUPPORT VECTOR MACHINES;

EID: 84860635411     PISSN: 15353893     EISSN: 15353907     Source Type: Journal    
DOI: 10.1021/pr3000688     Document Type: Article

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