Homology modeling and docking studies of FabH (β-ketoacyl-ACP synthase III) enzyme involved in type II fatty acid biosynthesis of Chlorella variabilis: A potential algal feedstock for biofuel production

Journal of Biomolecular Structure and Dynamics

Volumn 31, Issue 3, 2013, Pages 241-257

  Misra, Namrata ^a   Patra, Mahesh Chandra ^b   Panda, Prasanna Kumar ^a   Sukla, Lala Bihari ^a   Mishra, Barada Kanta ^a  

^a CSIR INSTITUTE OF MINERALS AND MATERIALS TECHNOLOGY   (India)

^b ORISSA UNIVERSITY OF AGRICULTURE AND TECHNOLOGY   (India)

Author keywords

Acyl carrier protein; Biofuel; Chlorella variabilis; Docking; FabH; Homology modeling; Microalgae; Molecular dynamics simulation

Indexed keywords

3 OXOACYL ACYL CARRIER PROTEIN SYNTHASE; ACYL CARRIER PROTEIN; ARGININE; ASPARTIC ACID; BIOFUEL; FATTY ACID; GLUTAMIC ACID; HYDROGEN;

ARTICLE; BINDING AFFINITY; BIOFUEL PRODUCTION; CHLORELLA; CHLORELLA VARIABILIS; COMPUTER MODEL; COMPUTER PROGRAM; ENZYME ACTIVE SITE; ENZYME BINDING; ENZYME CONFORMATION; ENZYME MECHANISM; ENZYME STABILITY; ENZYME STRUCTURE; ENZYME SUBSTRATE; FATTY ACID SYNTHESIS; HYDROGEN BOND; MOLECULAR DOCKING; MOLECULAR DYNAMICS; MOLECULAR MODEL; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROTEIN INTERACTION; SEQUENCE ALIGNMENT; STRUCTURAL HOMOLOGY;

3-OXOACYL-(ACYL-CARRIER-PROTEIN) SYNTHASE; ACYL CARRIER PROTEIN; AMINO ACID SEQUENCE; BIOFUELS; CATALYTIC DOMAIN; CHLORELLA; FATTY ACIDS; HYDROGEN BONDING; HYDROPHOBIC AND HYDROPHILIC INTERACTIONS; MOLECULAR DOCKING SIMULATION; MOLECULAR DYNAMICS SIMULATION; MOLECULAR SEQUENCE DATA; PHYLOGENY; PROTEIN STRUCTURE, SECONDARY; SEQUENCE ALIGNMENT; SEQUENCE HOMOLOGY, AMINO ACID; SOLVENTS; STRUCTURAL HOMOLOGY, PROTEIN;

EID: 84875159824     PISSN: 07391102     EISSN: 15380254     Source Type: Journal    
DOI: 10.1080/07391102.2012.698247     Document Type: Article

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