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Volumn 6, Issue 2, 2013, Pages 683-690

Effect of Amplicon Length in Propidium Monoazide Quantitative PCR for the Enumeration of Viable Cells of Salmonella in Cooked Ham

Author keywords

Amplicon length; Cooked ham; Microbial viability; Propidium monoazide; Quantitative PCR; Salmonella

Indexed keywords

CELLS; CYTOLOGY; MEATS; SALMONELLA;

EID: 84875051425     PISSN: 19369751     EISSN: 1936976X     Source Type: Journal    
DOI: 10.1007/s12161-012-9460-0     Document Type: Article
Times cited : (52)

References (41)
  • 1
    • 33744467948 scopus 로고    scopus 로고
    • Detection of live and antibiotic-killed bacteria by quantitative real-time PCR of specific fragments of rRNA
    • Aellen S, Que YA, Guignard B, Haenni M, Moreillon P (2006) Detection of live and antibiotic-killed bacteria by quantitative real-time PCR of specific fragments of rRNA. Antimicrob Agents Chemoter 50: 1913-1920.
    • (2006) Antimicrob Agents Chemoter , vol.50 , pp. 1913-1920
    • Aellen, S.1    Que, Y.A.2    Guignard, B.3    Haenni, M.4    Moreillon, P.5
  • 3
    • 79960092323 scopus 로고    scopus 로고
    • Rapid detection of viable Salmonella in produce by coupling propidium monoazide with loop-mediated isothermal amplification
    • Chen SY, Wang F, Beaulieu JC, Stein RE, Ge BL (2011) Rapid detection of viable Salmonella in produce by coupling propidium monoazide with loop-mediated isothermal amplification. Appl Environ Microbiol 77: 4008-4016.
    • (2011) Appl Environ Microbiol , vol.77 , pp. 4008-4016
    • Chen, S.Y.1    Wang, F.2    Beaulieu, J.C.3    Stein, R.E.4    Ge, B.L.5
  • 4
    • 0020394764 scopus 로고
    • Demonstration of specific high affinity binding sites in plasmid DNA by photoaffinity labeling with ethidium analog
    • Coffman GL, Gaubatz JW, Yielding KL, Yielding LW (1982) Demonstration of specific high affinity binding sites in plasmid DNA by photoaffinity labeling with ethidium analog. J Biol Chem 257: 3205-3207.
    • (1982) J Biol Chem , vol.257 , pp. 3205-3207
    • Coffman, G.L.1    Gaubatz, J.W.2    Yielding, K.L.3    Yielding, L.W.4
  • 5
    • 0017813204 scopus 로고
    • Characterization of azidobenzamidines as photoaffinity labeling for trypsin
    • Detraglia MC, Brand JS, Tometsko AM (1978) Characterization of azidobenzamidines as photoaffinity labeling for trypsin. J Biol Chem 253: 1846-1852.
    • (1978) J Biol Chem , vol.253 , pp. 1846-1852
    • Detraglia, M.C.1    Brand, J.S.2    Tometsko, A.M.3
  • 6
    • 0030904849 scopus 로고    scopus 로고
    • Salmonella DNA persistence in natural seawaters using PCR analysis
    • Dupray E, Caprais MP, Derrien A, Fach P (1997) Salmonella DNA persistence in natural seawaters using PCR analysis. J Appl Microbiol 82: 507-510.
    • (1997) J Appl Microbiol , vol.82 , pp. 507-510
    • Dupray, E.1    Caprais, M.P.2    Derrien, A.3    Fach, P.4
  • 7
    • 84865573393 scopus 로고    scopus 로고
    • The European Union summary report on trends and sources of zoonoses, zoonotic agents and food-borne outbreaks in the European Union in 2010
    • EFSA
    • EFSA (2012) The European Union summary report on trends and sources of zoonoses, zoonotic agents and food-borne outbreaks in the European Union in 2010. The EFSA Journal 10: 2597-3039.
    • (2012) The EFSA Journal , vol.10 , pp. 2597-3039
  • 8
    • 84855170414 scopus 로고    scopus 로고
    • Quantitative detection of viable foodborne E. coli O157:H7, Listeria monocytogenes and Salmonella in fresh-cut vegetables combining propidium monoazide and real-time PCR
    • Elizaquivel P, Sanchez G, Aznar R (2012) Quantitative detection of viable foodborne E. coli O157: H7, Listeria monocytogenes and Salmonella in fresh-cut vegetables combining propidium monoazide and real-time PCR. Food Contr 25: 704-708.
    • (2012) Food Contr , vol.25 , pp. 704-708
    • Elizaquivel, P.1    Sanchez, G.2    Aznar, R.3
  • 9
    • 78650680168 scopus 로고    scopus 로고
    • Viable real-time PCR in environmental samples: can all data be interpreted directly?
    • Fittipaldi M, Codony F, Adrados B, Camper AK, Morato J (2010) Viable real-time PCR in environmental samples: can all data be interpreted directly? Microb Ecol 61: 7-12.
    • (2010) Microb Ecol , vol.61 , pp. 7-12
    • Fittipaldi, M.1    Codony, F.2    Adrados, B.3    Camper, A.K.4    Morato, J.5
  • 10
    • 33745086594 scopus 로고    scopus 로고
    • A rapid molecular-based assay for direct quantification of viable bacteria in slaughterhouses
    • Guy RA, Kapoor A, Holicka J, Shepherd D, Horgen PA (2006) A rapid molecular-based assay for direct quantification of viable bacteria in slaughterhouses. J Food Prot 69: 1265-1272.
    • (2006) J Food Prot , vol.69 , pp. 1265-1272
    • Guy, R.A.1    Kapoor, A.2    Holicka, J.3    Shepherd, D.4    Horgen, P.A.5
  • 11
    • 17644386221 scopus 로고    scopus 로고
    • Real-time polymerase chain reaction for the food microbiologist: technologies, applications, and limitations
    • Hanna SE, Christopher JC, Wang HH (2005) Real-time polymerase chain reaction for the food microbiologist: technologies, applications, and limitations. J Food Sci 70: 49-53.
    • (2005) J Food Sci , vol.70 , pp. 49-53
    • Hanna, S.E.1    Christopher, J.C.2    Wang, H.H.3
  • 12
    • 0016433241 scopus 로고
    • Selective covalent binding of an ethidium analog to mitochondrial DNA with production of petite mutants in yeast by photoaffinity labeling
    • Hixon SC, White WE, Yielding KL (1975) Selective covalent binding of an ethidium analog to mitochondrial DNA with production of petite mutants in yeast by photoaffinity labeling. J Mol Biol 92: 319-329.
    • (1975) J Mol Biol , vol.92 , pp. 319-329
    • Hixon, S.C.1    White, W.E.2    Yielding, K.L.3
  • 13
    • 0033823852 scopus 로고    scopus 로고
    • Automated 5′ nuclease PCR assay for identification of Salmonella enterica
    • Hoorfar J, Ahrens P, Radström P (2000) Automated 5′ nuclease PCR assay for identification of Salmonella enterica. J Clin Microbiol 38: 3429-3435.
    • (2000) J Clin Microbiol , vol.38 , pp. 3429-3435
    • Hoorfar, J.1    Ahrens, P.2    Radström, P.3
  • 16
    • 80052362316 scopus 로고    scopus 로고
    • Effect of PCR amplicon length on suppressing signals from membrane-compromised cells by propidium monoazide treatment
    • Jopia Contreras P, Urrutia H, Sossa K, Nocker A (2011) Effect of PCR amplicon length on suppressing signals from membrane-compromised cells by propidium monoazide treatment. J Microbiol Methods 87: 89-95.
    • (2011) J Microbiol Methods , vol.87 , pp. 89-95
    • Jopia Contreras, P.1    Urrutia, H.2    Sossa, K.3    Nocker, A.4
  • 17
    • 77955580586 scopus 로고    scopus 로고
    • Rapid quantification of viable campylobacter bacteria on chicken carcasses, using real-time PCR and propidium monoazide treatment, as a tool for quantitative risk assessment
    • Josefsen MH, Lofstrom C, Hansen TB, Christensen LS, Olsen JE, Hoorfar J (2010) Rapid quantification of viable campylobacter bacteria on chicken carcasses, using real-time PCR and propidium monoazide treatment, as a tool for quantitative risk assessment. Appl Environ Microbiol 76: 5097-5104.
    • (2010) Appl Environ Microbiol , vol.76 , pp. 5097-5104
    • Josefsen, M.H.1    Lofstrom, C.2    Hansen, T.B.3    Christensen, L.S.4    Olsen, J.E.5    Hoorfar, J.6
  • 18
    • 0027363920 scopus 로고
    • Polymerase chain reaction detection of nonviable bacterial pathogens
    • Josephson KL, Gerba CP, Pepper IL (1993) Polymerase chain reaction detection of nonviable bacterial pathogens. Appl Environ Microbiol 59(10): 3513-3515.
    • (1993) Appl Environ Microbiol , vol.59 , Issue.10 , pp. 3513-3515
    • Josephson, K.L.1    Gerba, C.P.2    Pepper, I.L.3
  • 19
    • 0036268829 scopus 로고    scopus 로고
    • Rapid detection of Escherichia coli O157:H7 with multiplex real-time PCR assays
    • Jothikumar N, Griffiths MW (2002) Rapid detection of Escherichia coli O157: H7 with multiplex real-time PCR assays. Appl Environ Microbiol 68: 3169-3171.
    • (2002) Appl Environ Microbiol , vol.68 , pp. 3169-3171
    • Jothikumar, N.1    Griffiths, M.W.2
  • 20
    • 0035988627 scopus 로고    scopus 로고
    • Quantification using real-time PCR technology: applications and limitations
    • Klein D (2002) Quantification using real-time PCR technology: applications and limitations. Trends Mol Med 8: 257-260.
    • (2002) Trends Mol Med , vol.8 , pp. 257-260
    • Klein, D.1
  • 21
    • 79955634903 scopus 로고    scopus 로고
    • Detection of viable Salmonella in lettuce by propidium monoazide real-time PCR
    • Liang NJ, Dong J, Luo LX, Li Y (2011) Detection of viable Salmonella in lettuce by propidium monoazide real-time PCR. J Food Sci 76: M234-M237.
    • (2011) J Food Sci , vol.76
    • Liang, N.J.1    Dong, J.2    Luo, L.X.3    Li, Y.4
  • 23
    • 0028305450 scopus 로고
    • Effect of stress treatments on the detection of Listeria monocytogenes and enterotoxigenic Escherichia coli by the polymerase chain-reaction
    • Masters CI, Shallcross JA, Mackey BM (1994) Effect of stress treatments on the detection of Listeria monocytogenes and enterotoxigenic Escherichia coli by the polymerase chain-reaction. J Appl Bacteriol 77: 73-79.
    • (1994) J Appl Bacteriol , vol.77 , pp. 73-79
    • Masters, C.I.1    Shallcross, J.A.2    Mackey, B.M.3
  • 24
    • 33644965765 scopus 로고    scopus 로고
    • Selective removal of DNA from dead cells of mixed bacterial communities by use of ethidium monoazide
    • Nocker A, Camper AK (2006) Selective removal of DNA from dead cells of mixed bacterial communities by use of ethidium monoazide. Appl Environ Microbiol 72: 1997-2004.
    • (2006) Appl Environ Microbiol , vol.72 , pp. 1997-2004
    • Nocker, A.1    Camper, A.K.2
  • 25
    • 33748746842 scopus 로고    scopus 로고
    • Comparison of propidium monoazide with ethidium monoazide for differentiation of live vs. dead bacteria by selective removal of DNA from dead cells
    • Nocker A, Cheung C-Y, Camper AK (2006) Comparison of propidium monoazide with ethidium monoazide for differentiation of live vs. dead bacteria by selective removal of DNA from dead cells. J Microbiol Methods 67: 310-320.
    • (2006) J Microbiol Methods , vol.67 , pp. 310-320
    • Nocker, A.1    Cheung, C.-Y.2    Camper, A.K.3
  • 26
    • 34547599355 scopus 로고    scopus 로고
    • Molecular monitoring of disinfection efficacy using propidium monoazide in combination with quantitative PCR
    • Nocker A, Sossa KE, Camper AK (2007) Molecular monitoring of disinfection efficacy using propidium monoazide in combination with quantitative PCR. J Microbiol Methods 70: 252-260.
    • (2007) J Microbiol Methods , vol.70 , pp. 252-260
    • Nocker, A.1    Sossa, K.E.2    Camper, A.K.3
  • 27
    • 0037390078 scopus 로고    scopus 로고
    • Ethidium monoazide for DNA-based differentiation of viable and dead bacteria by 5′-nuclease PCR
    • Nogva HK, Dromtrop SM, Nissen H, Rudi K (2003) Ethidium monoazide for DNA-based differentiation of viable and dead bacteria by 5′-nuclease PCR. Biotechniques 34: 804-813.
    • (2003) Biotechniques , vol.34 , pp. 804-813
    • Nogva, H.K.1    Dromtrop, S.M.2    Nissen, H.3    Rudi, K.4
  • 28
    • 66749100180 scopus 로고    scopus 로고
    • Simultaneous direct detection of Salmonella spp., Listeria monocytogenes and Escherichia coli O157 in milk samples by magnetic extraction and multiplex PCR
    • Omiccioli E, Amagliani G, Brandi G, Bruce IJ, Magnani M (2009) Simultaneous direct detection of Salmonella spp., Listeria monocytogenes and Escherichia coli O157 in milk samples by magnetic extraction and multiplex PCR. J Rapid Meth Aut Mic 17: 195-213.
    • (2009) J Rapid Meth Aut Mic , vol.17 , pp. 195-213
    • Omiccioli, E.1    Amagliani, G.2    Brandi, G.3    Bruce, I.J.4    Magnani, M.5
  • 29
    • 37349080565 scopus 로고    scopus 로고
    • Enumeration of viable Listeria monocytogenes cells by real-time PCR with propidium monoazide and ethidium monoazide in the presence of dead cells
    • Pan Y, Breidt F Jr (2007) Enumeration of viable Listeria monocytogenes cells by real-time PCR with propidium monoazide and ethidium monoazide in the presence of dead cells. Appl Environ Microbiol 73: 8028-8031.
    • (2007) Appl Environ Microbiol , vol.73 , pp. 8028-8031
    • Pan, Y.1    Breidt Jr., F.2
  • 30
    • 79955831883 scopus 로고    scopus 로고
    • Recent advances in quantitative PCR (qPCR) applications in food microbiology
    • Postollec F, Hln F, Pavan S, Jrm C, Dl S (2011) Recent advances in quantitative PCR (qPCR) applications in food microbiology. Food Microbiol 28: 848-861.
    • (2011) Food Microbiol , vol.28 , pp. 848-861
    • Postollec, F.1    Hln, F.2    Pavan, S.3    Jrm, C.4    Dl, S.5
  • 31
    • 0026901089 scopus 로고
    • Amplification of an invA gene sequence of Salmonella typhimurium by polymerase chain reaction as a specific method of detection of Salmonella
    • Rahn K, De Grandis SS, Clarke RC, McEwen SA, Galán JE, Ginocchio C, Curtiss R, Gyles CL (1992) Amplification of an invA gene sequence of Salmonella typhimurium by polymerase chain reaction as a specific method of detection of Salmonella. Mol Cell Probes 6: 271-279.
    • (1992) Mol Cell Probes , vol.6 , pp. 271-279
    • Rahn, K.1    De Grandis, S.S.2    Clarke, R.C.3    McEwen, S.A.4    Galán, J.E.5    Ginocchio, C.6    Curtiss, R.7    Gyles, C.L.8
  • 32
    • 33745160325 scopus 로고    scopus 로고
    • Evaluation of probe chemistries and platforms to improve the detection limit of real-time PCR
    • Reynisson E, Josefsen MH, Krause A, Hoorfar J (2006) Evaluation of probe chemistries and platforms to improve the detection limit of real-time PCR. J Microbiol Methods 66: 206-216.
    • (2006) J Microbiol Methods , vol.66 , pp. 206-216
    • Reynisson, E.1    Josefsen, M.H.2    Krause, A.3    Hoorfar, J.4
  • 33
    • 12144289997 scopus 로고    scopus 로고
    • Quantitative detection of Listeria monocytogenes and Listeria innocua by real-time PCR: assesssment of hly, iap and lin02483 targets and amplifluor technology
    • Rodríguez-Lázaro D, Hernández M, Scortti M, Esteve T, Vázquez-Boland JA, Pla M (2004) Quantitative detection of Listeria monocytogenes and Listeria innocua by real-time PCR: assesssment of hly, iap and lin02483 targets and amplifluor technology. Appl Environ Microbiol 70: 1366-1377.
    • (2004) Appl Environ Microbiol , vol.70 , pp. 1366-1377
    • Rodríguez-Lázaro, D.1    Hernández, M.2    Scortti, M.3    Esteve, T.4    Vázquez-Boland, J.A.5    Pla, M.6
  • 34
    • 13544254304 scopus 로고    scopus 로고
    • Use of ethidium monoazide and PCR in combination for quantification of viable and dead cells in complex samples
    • Rudi K, Moen B, Dromtorp SM, Holck AL (2005) Use of ethidium monoazide and PCR in combination for quantification of viable and dead cells in complex samples. Appl Environ Microbiol 71: 1018-1024.
    • (2005) Appl Environ Microbiol , vol.71 , pp. 1018-1024
    • Rudi, K.1    Moen, B.2    Dromtorp, S.M.3    Holck, A.L.4
  • 36
    • 80052260329 scopus 로고    scopus 로고
    • Polymerase chain reaction amplification length-dependent ethidium monoazide suppression power for heat-killed cells of Enterobacteriaceae
    • S-I Y
    • Soejima T, Schlitt-Dittrich F, S-i Y (2011) Polymerase chain reaction amplification length-dependent ethidium monoazide suppression power for heat-killed cells of Enterobacteriaceae. Anal Biochem 418: 37-43.
    • (2011) Anal Biochem , vol.418 , pp. 37-43
    • Soejima, T.1    Schlitt-Dittrich, F.2
  • 37
    • 59849096286 scopus 로고    scopus 로고
    • Studying the effect of single mismatches in primer and probe binding regions on amplification curves and quantification in real-time PCR
    • Süß B, Flekna G, Wagner M, Hein I (2009) Studying the effect of single mismatches in primer and probe binding regions on amplification curves and quantification in real-time PCR. J Microbiol Methods 76: 316-319.
    • (2009) J Microbiol Methods , vol.76 , pp. 316-319
    • Süß, B.1    Flekna, G.2    Wagner, M.3    Hein, I.4
  • 38
    • 70350479348 scopus 로고    scopus 로고
    • Quantitative real-time PCR analysis of total and propidium monoazide-resistant fecal indicator bacteria in wastewater
    • Varma M, Field R, Stinson M, Rukovets B, Wymer L, Hauglanda R (2009) Quantitative real-time PCR analysis of total and propidium monoazide-resistant fecal indicator bacteria in wastewater. Water Res 43: 4790-4801.
    • (2009) Water Res , vol.43 , pp. 4790-4801
    • Varma, M.1    Field, R.2    Stinson, M.3    Rukovets, B.4    Wymer, L.5    Hauglanda, R.6
  • 40
    • 77953982116 scopus 로고    scopus 로고
    • EMA-real-time PCR as a reliable method for detection of viable Salmonella in chicken and eggs
    • Wang L, Mustapha A (2010) EMA-real-time PCR as a reliable method for detection of viable Salmonella in chicken and eggs. J Food Sci 75: M134-M139.
    • (2010) J Food Sci , vol.75
    • Wang, L.1    Mustapha, A.2
  • 41
    • 0034458720 scopus 로고    scopus 로고
    • Identification of ciprofloxacin-resistant Campylobacter jejuni by use of a fluorogenic PCR assay
    • Wilson DL, Abner SR, Newman TC, Mansfield LS, Linz JE (2000) Identification of ciprofloxacin-resistant Campylobacter jejuni by use of a fluorogenic PCR assay. J Clin Microbiol 38: 3971-3978.
    • (2000) J Clin Microbiol , vol.38 , pp. 3971-3978
    • Wilson, D.L.1    Abner, S.R.2    Newman, T.C.3    Mansfield, L.S.4    Linz, J.E.5


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