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Volumn 32, Issue 3, 2013, Pages 437-449

Dimerization of Sir3 via its C-terminal winged helix domain is essential for yeast heterochromatin formation

Author keywords

Dimerization; Heterochromatin; Orc1; Sir3; Winged helix turn helix

Indexed keywords

HELIX LOOP HELIX PROTEIN; HOMODIMER; SILENT INFORMATION REGULATOR PROTEIN; SILENT INFORMATION REGULATOR PROTEIN 3; UNCLASSIFIED DRUG;

EID: 84873567117     PISSN: 02614189     EISSN: 14602075     Source Type: Journal    
DOI: 10.1038/emboj.2012.343     Document Type: Article
Times cited : (26)

References (74)
  • 1
    • 15944379232 scopus 로고    scopus 로고
    • The many faces of the helix-turn-helix domain: Transcription regulation and beyond
    • DOI 10.1016/j.femsre.2004.12.008, Bacterial Genomics
    • Aravind L, Anantharaman V, Balaji S, Babu MM, Iyer LM (2005) The many faces of the helix-turn-helix domain: Transcription regulation and beyond. FEMS Microbiol Rev 29: 231-262 (Pubitemid 40439243)
    • (2005) FEMS Microbiology Reviews , vol.29 , Issue.2 , pp. 231-262
    • Aravind, L.1    Anantharaman, V.2    Balaji, S.3    Babu, M.M.4    Iyer, L.M.5
  • 2
    • 81555212272 scopus 로고    scopus 로고
    • Structural basis of silencing: Sir3 BAH domain in complex with a nucleosome at 3.0 A resolution
    • Armache KJ, Garlick JD, Canzio D, Narlikar GJ, Kingston RE (2011) Structural basis of silencing: Sir3 BAH domain in complex with a nucleosome at 3.0 A resolution. Science 334: 977-982
    • (2011) Science , vol.334 , pp. 977-982
    • Armache, K.J.1    Garlick, J.D.2    Canzio, D.3    Narlikar, G.J.4    Kingston, R.E.5
  • 3
    • 0028832366 scopus 로고
    • The multidomain structure of Orc1p reveals similarity to regulators of DNA replication and transcriptional silencing
    • Bell SP, Mitchell J, Leber J, Kobayashi R, Stillman B (1995) The multidomain structure of Orc1p reveals similarity to regulators of DNA replication and transcriptional silencing. Cell 83: 563-568
    • (1995) Cell , vol.83 , pp. 563-568
    • Bell, S.P.1    Mitchell, J.2    Leber, J.3    Kobayashi, R.4    Stillman, B.5
  • 5
    • 0027192267 scopus 로고
    • Transcriptional silencing in yeast is associated with reduced nucleosome acetylation
    • Braunstein M, Rose AB, Holmes SG, Allis CD, Broach JR (1993) Transcriptional silencing in yeast is associated with reduced nucleosome acetylation. Genes Dev 7: 592-604 (Pubitemid 23125260)
    • (1993) Genes and Development , vol.7 , Issue.4 , pp. 592-604
    • Braunstein, M.1    Rose, A.B.2    Holmes, S.G.3    Allis, C.D.4    Broach, J.R.5
  • 8
    • 0142134870 scopus 로고    scopus 로고
    • Structure of the coiled-coil dimerization motif of Sir4 and its interaction with Sir3
    • DOI 10.1016/S0969-2126(03)00093-5
    • Chang JF, Hall BE, Tanny JC, Moazed D, Filman D, Ellenberger T (2003) Structure of the coiled-coil dimerization motif of Sir4 and its interaction with Sir3. Structure 11: 637-649 (Pubitemid 37281180)
    • (2003) Structure , vol.11 , Issue.6 , pp. 637-649
    • Chang, J.-F.1    Hall, B.E.2    Tanny, J.C.3    Moazed, D.4    Filman, D.5    Ellenberger, T.6
  • 10
    • 33644864706 scopus 로고    scopus 로고
    • A homotrimer-heterotrimer switch in Sir2 structure differentiates rDNA and telomeric silencing
    • DOI 10.1016/j.molcel.2006.02.006, PII S1097276506000864
    • Cubizolles F, Martino F, Perrod S, Gasser SM (2006) A homotrimerheterotrimer switch in Sir2 structure differentiates rDNA and telomeric silencing. Mol Cell 21: 825-836 (Pubitemid 43376132)
    • (2006) Molecular Cell , vol.21 , Issue.6 , pp. 825-836
    • Cubizolles, F.1    Martino, F.2    Perrod, S.3    Gasser, S.M.4
  • 12
    • 4344564717 scopus 로고    scopus 로고
    • Modular organization of a Cdc6-like protein from the crenarchaeon Sulfolobus solfataricus
    • DOI 10.1042/BJ20040280
    • De Felice M, Esposito L, Pucci B, De Falco M, Manco G, Rossi M, Pisani FM (2004) Modular organization of a Cdc6-like protein from the crenarchaeon Sulfolobus solfataricus. Biochem J 381(Part 3): 645-653 (Pubitemid 39120473)
    • (2004) Biochemical Journal , vol.381 , Issue.3 , pp. 645-653
    • De Felice, M.1    Esposito, L.2    Pucci, B.3    De Falco, M.4    Manco, G.5    Rossi, M.6    Pisani, F.M.7
  • 13
    • 84873569139 scopus 로고    scopus 로고
    • Replication origin recognition and deformation by a heterodimeric archaeal
    • Dueber EL, Corn JE, Bell SD, Berger JM (2007) Replication origin recognition and deformation by a heterodimeric archaeal Orc1
    • (2007) Orc1
    • Dueber, E.L.1    Corn, J.E.2    Bell, S.D.3    Berger, J.M.4
  • 14
    • 84873568220 scopus 로고    scopus 로고
    • Complex
    • complex. Science 317: 1210-1213
    • Science , vol.317 , pp. 1210-1213
  • 16
    • 0034044839 scopus 로고    scopus 로고
    • Identification of a novel allele of SIR3 defective in the maintenance, but not the establishment, of silencing in Saccharomyces cerevisiae
    • Enomoto S, Johnston SD, Berman J (2000) Identification of a novel allele of SIR3 defective in the maintenance, but not the establishment, of silencing in Saccharomyces cerevisiae. Genetics 155: 523-538 (Pubitemid 30397107)
    • (2000) Genetics , vol.155 , Issue.2 , pp. 523-538
    • Enomoto, S.1    Johnston, S.D.2    Berman, J.3
  • 18
    • 0035861202 scopus 로고    scopus 로고
    • The molecular biology of the SIR proteins
    • DOI 10.1016/S0378-1119(01)00741-7, PII S0378111901007417
    • Gasser SM, Cockell MM (2001) The molecular biology of the SIR proteins. Gene 279: 1-16 (Pubitemid 33145178)
    • (2001) Gene , vol.279 , Issue.1 , pp. 1-16
    • Gasser, S.M.1    Cockell, M.M.2
  • 19
    • 34548529079 scopus 로고    scopus 로고
    • Structural basis of DNA replication origin recognition by an ORC protein
    • Gaudier M, Schuwirth BS, Westcott SL, Wigley DB (2007) Structural basis of DNA replication origin recognition by an ORC protein. Science 317: 1213-1216
    • (2007) Science , vol.317 , pp. 1213-1216
    • Gaudier, M.1    Schuwirth, B.S.2    Westcott, S.L.3    Wigley, D.B.4
  • 21
    • 0035881504 scopus 로고    scopus 로고
    • Sir2p exists in two nucleosome-binding complexes with distinct deacetylase activities
    • DOI 10.1093/emboj/20.16.4522
    • Ghidelli S, Donze D, Dhillon N, Kamakaka RT (2001) Sir2p exists in two nucleosome-binding complexes with distinct deacetylase activities. Embo J 20: 4522-4535 (Pubitemid 32772046)
    • (2001) EMBO Journal , vol.20 , Issue.16 , pp. 4522-4535
    • Ghidelli, S.1    Donze, D.2    Dhillon, N.3    Kamakaka, R.T.4
  • 22
    • 0030479611 scopus 로고    scopus 로고
    • Nuclear organization and transcriptional silencing in yeast
    • DOI 10.1007/BF01952113
    • Gotta M, Gasser SM (1996) Nuclear organization and transcriptional silencing in yeast. Experientia 52: 1136-1147 (Pubitemid 27022825)
    • (1996) Experientia , vol.52 , Issue.12 , pp. 1136-1147
    • Gotta, M.1    Gasser, S.M.2
  • 24
    • 0026552380 scopus 로고
    • Telomere-proximal DNA in Saccharomyces cerevisiae is refractory to methyltransferase activity in vivo
    • Gottschling DE (1992) Telomere-proximal DNA in Saccharomyces cerevisiae is refractory to methyltransferase activity in vivo. Proc Natl Acad Sci USA 89: 4062-4065
    • (1992) Proc Natl Acad Sci USA , vol.89 , pp. 4062-4065
    • Gottschling, D.E.1
  • 25
    • 0025201982 scopus 로고
    • Position effect at S. cerevisiae telomeres: Reversible repression of pol II transcription
    • Gottschling DE, Aparicio OM, Billington BL, Zakian VA (1990) Position effect at S. cerevisiae telomeres: Reversible repression of Pol II transcription. Cell 63: 751-762 (Pubitemid 120035048)
    • (1990) Cell , vol.63 , Issue.4 , pp. 751-762
    • Gottschling, D.E.1    Aparicio, O.M.2    Billington, B.L.3    Zakian, V.A.4
  • 26
    • 0029817763 scopus 로고    scopus 로고
    • Spreading of transcriptional repressor SIR3 from telomeric heterochromatin
    • DOI 10.1038/383092a0
    • Hecht A, Strahl-Bolsinger S, Grunstein M (1996) Spreading of transcriptional repressor SIR3 from telomeric heterochromatin. Nature 383: 92-96 (Pubitemid 26296468)
    • (1996) Nature , vol.383 , Issue.6595 , pp. 92-96
    • Hecht, A.1    Strahl-Bolsinger, S.2    Grunstein, M.3
  • 27
    • 80052355543 scopus 로고    scopus 로고
    • Reinventing heterochromatin in budding yeasts: Sir2 and the origin recognition complex take center stage
    • Hickman MA, Froyd CA, Rusche LN (2011) Reinventing heterochromatin in budding yeasts: Sir2 and the origin recognition complex take center stage. Eukaryot Cell 10: 1183-1192
    • (2011) Eukaryot Cell , vol.10 , pp. 1183-1192
    • Hickman, M.A.1    Froyd, C.A.2    Rusche, L.N.3
  • 28
    • 78650609911 scopus 로고    scopus 로고
    • Transcriptional silencing functions of the yeast protein Orc1/Sir3 subfunctionalized after gene duplication
    • Hickman MA, Rusche LN (2010) Transcriptional silencing functions of the yeast protein Orc1/Sir3 subfunctionalized after gene duplication. Proc Natl Acad Sci USA 107: 19384-19389
    • (2010) Proc Natl Acad Sci USA , vol.107 , pp. 19384-19389
    • Hickman, M.A.1    Rusche, L.N.2
  • 29
    • 77954288774 scopus 로고    scopus 로고
    • Dali server: Conservation mapping in 3D
    • Web Server issue
    • Holm L, Rosenstrom P (2010) Dali server: Conservation mapping in 3D. Nucleic Acids Res 38(Web Server issue): W545-W549
    • (2010) Nucleic Acids Res , vol.38
    • Holm, L.1    Rosenstrom, P.2
  • 30
    • 0036261650 scopus 로고    scopus 로고
    • Steps in assembly of silent chromatin in yeast: Sir3-independent binding of a Sir2/Sir4 complex to silencers and role for Sir2-dependent deacetylation
    • DOI 10.1128/MCB.22.12.4167-4180.2002
    • Hoppe GJ, Tanny JC, Rudner AD, Gerber SA, Danaie S, Gygi SP, Moazed D (2002) Steps in assembly of silent chromatin in yeast: Sir3-independent binding of a Sir2/Sir4 complex to silencers and role for Sir2-dependent deacetylation. Mol Cell Biol 22: 4167-4180 (Pubitemid 34556587)
    • (2002) Molecular and Cellular Biology , vol.22 , Issue.12 , pp. 4167-4180
    • Hoppe, G.J.1    Tanny, J.C.2    Rudner, A.D.3    Gerber, S.A.4    Danaie, S.5    Gygi, S.P.6    Moazed, D.7
  • 31
    • 11844299709 scopus 로고    scopus 로고
    • A method for the in vitro reconstitution of a defined '30 nm' chromatin fibre containing stoichiometric amounts of the linker histone
    • DOI 10.1016/j.jmb.2004.10.075, PII S0022283604013968
    • Huynh VA, Robinson PJ, Rhodes D (2005) A method for the in vitro reconstitution of a defined '30 nm' chromatin fibre containing stoichiometric amounts of the linker histone. J Mol Biol 345: 957-968 (Pubitemid 40092217)
    • (2005) Journal of Molecular Biology , vol.345 , Issue.5 , pp. 957-968
    • Huynh, V.A.T.1    Robinson, P.J.J.2    Rhodes, D.3
  • 32
    • 0034677535 scopus 로고    scopus 로고
    • Transcriptional silencing and longevity protein Sir2 is an NAD-dependent histone deacetylase
    • DOI 10.1038/35001622
    • Imai S, Armstrong CM, Kaeberlein M, Guarente L (2000) Transcriptional silencing and longevity protein Sir2 is an NADdependent histone deacetylase. Nature 403: 795-800 (Pubitemid 30111843)
    • (2000) Nature , vol.403 , Issue.6771 , pp. 795-800
    • Imai, S.-I.1    Armstrong, C.M.2    Kaeberlein, M.3    Guarente, L.4
  • 34
    • 1942452749 scopus 로고    scopus 로고
    • Proof and evolutionary analysis of ancient genome duplication in the yeast Saccharomyces cerevisiae
    • DOI 10.1038/nature02424
    • Kellis M, Birren BW, Lander ES (2004) Proof and evolutionary analysis of ancient genome duplication in the yeast Saccharomyces cerevisiae. Nature 428: 617-624 (Pubitemid 38524797)
    • (2004) Nature , vol.428 , Issue.6983 , pp. 617-624
    • Kellis, M.1    Birren, B.W.2    Lander, E.S.3
  • 36
    • 33745977103 scopus 로고    scopus 로고
    • Domain structure and protein interactions of the silent information regulator Sir3 revealed by screening a nested deletion library of protein fragments
    • DOI 10.1074/jbc.M512588200
    • King DA, Hall BE, Iwamoto MA, Win KZ, Chang JF, Ellenberger T (2006) Domain structure and protein interactions of the silent information regulator Sir3 revealed by screening a nested deletion library of protein fragments. J Biol Chem 281: 20107-20119 (Pubitemid 44065785)
    • (2006) Journal of Biological Chemistry , vol.281 , Issue.29 , pp. 20107-20119
    • King, D.A.1    Hall, B.E.2    Iwamoto, M.A.3    Khine, Z.W.4    Ju, F.C.5    Ellenberger, T.6
  • 37
    • 34548232365 scopus 로고    scopus 로고
    • Inference of macromolecular assemblies from crystalline State
    • DOI 10.1016/j.jmb.2007.05.022, PII S0022283607006420
    • Krissinel E, Henrick K (2007) Inference of macromolecular assemblies from crystalline state. J Mol Biol 372: 774-797 (Pubitemid 47321791)
    • (2007) Journal of Molecular Biology , vol.372 , Issue.3 , pp. 774-797
    • Krissinel, E.1    Henrick, K.2
  • 39
    • 33749621047 scopus 로고    scopus 로고
    • Sir3 C-terminal domain involvement in the initiation and spreading of heterochromatin
    • DOI 10.1128/MCB.01082-06
    • Liaw H, Lustig AJ (2006) Sir3 C-terminal domain involvement in the initiation and spreading of heterochromatin. Mol Cell Biol 26: 7616-7631 (Pubitemid 44547710)
    • (2006) Molecular and Cellular Biology , vol.26 , Issue.20 , pp. 7616-7631
    • Liaw, H.1    Lustig, A.J.2
  • 40
    • 0033634866 scopus 로고    scopus 로고
    • Structure and function of Cdc6/Cdc18: Implications for origin recognition and checkpoint control
    • Liu J, Smith CL, DeRyckere D, DeAngelis K, Martin GS, Berger JM (2000) Structure and function of Cdc6/Cdc18: Implications for origin recognition and checkpoint control. Mol Cell 6: 637-648
    • (2000) Mol Cell , vol.6 , pp. 637-648
    • Liu, J.1    Smith, C.L.2    DeRyckere, D.3    DeAngelis, K.4    Martin, G.S.5    Berger, J.M.6
  • 41
    • 84855849459 scopus 로고    scopus 로고
    • Homodimerization and binding of specific domains to the target DNA are essential requirements for HlyU to regulate expression of the virulence gene rtxA1, encoding the repeat-in-toxin protein in the human pathogen Vibrio vulnificus
    • Liu M, Rose M, Crosa JH (2011) Homodimerization and binding of specific domains to the target DNA are essential requirements for HlyU to regulate expression of the virulence gene rtxA1, encoding the repeat-in-toxin protein in the human pathogen Vibrio vulnificus. J Bacteriol 193: 6895-6901
    • (2011) J Bacteriol , vol.193 , pp. 6895-6901
    • Liu, M.1    Rose, M.2    Crosa, J.H.3
  • 42
    • 0028304836 scopus 로고
    • Silencers and domains of generalized repression
    • Loo S, Rine J (1994) Silencers and domains of generalized repression. Science 264: 1768-1771 (Pubitemid 24227759)
    • (1994) Science , vol.264 , Issue.5166 , pp. 1768-1771
    • Loo, S.1    Rine, J.2
  • 43
    • 0029746494 scopus 로고    scopus 로고
    • Evidence for silencing compartments within the yeast nucleus: A role for telomere proximity and Sir protein concentration in silencer-mediated repression
    • Maillet L, Boscheron C, Gotta M, Marcand S, Gilson E, Gasser SM (1996) Evidence for silencing compartments within the yeast nucleus: A role for telomere proximity and Sir protein concentration in silencer-mediated repression. Genes Dev 10: 1796-1811 (Pubitemid 26272385)
    • (1996) Genes and Development , vol.10 , Issue.14 , pp. 1796-1811
    • Maillet, L.1    Boscheron, C.2    Gotta, M.3    Marcand, S.4    Gilson, E.5    Gasser, S.M.6
  • 44
    • 0029741576 scopus 로고    scopus 로고
    • Silencing of genes at nontelomeric sites in yeast is controlled by sequestration of silencing factors at telomeres by Rap1 protein
    • Marcand S, Buck SW, Moretti P, Gilson E, Shore D (1996) Silencing of genes at nontelomeric sites in yeast is controlled by sequestration of silencing factors at telomeres by Rap 1 protein. Genes Dev 10: 1297-1309 (Pubitemid 26260711)
    • (1996) Genes and Development , vol.10 , Issue.11 , pp. 1297-1309
    • Marcand, S.1    Buck, S.W.2    Moretti, P.3    Gilson, E.4    Shore, D.5
  • 46
    • 33845948523 scopus 로고    scopus 로고
    • Domain organization and quaternary structure of the Saccharomyces cerevisiae silent information regulator 3 protein, Sir3p
    • DOI 10.1021/bi061693k
    • McBryant SJ, Krause C, Hansen JC (2006) Domain organization and quaternary structure of the Saccharomyces cerevisiae silent information regulator 3 protein, Sir3p. Biochemistry 45: 15941-15948 (Pubitemid 46032515)
    • (2006) Biochemistry , vol.45 , Issue.51 , pp. 15941-15948
    • McBryant, S.J.1    Krause, C.2    Hansen, J.C.3
  • 47
    • 44349116198 scopus 로고    scopus 로고
    • The silent information regulator 3 protein, SIR3p, binds to chromatin fibers and assembles a hypercondensed chromatin architecture in the presence of salt
    • DOI 10.1128/MCB.01389-07
    • McBryant SJ, Krause C, Woodcock CL, Hansen JC (2008) The silent information regulator 3 protein, SIR3p, binds to chromatin fibers and assembles a hypercondensed chromatin architecture in the presence of salt. Mol Cell Biol 28: 3563-3572 (Pubitemid 351732895)
    • (2008) Molecular and Cellular Biology , vol.28 , Issue.11 , pp. 3563-3572
    • McBryant, S.J.1    Krause, C.2    Woodcock, C.L.3    Hansen, J.C.4
  • 48
    • 2942733647 scopus 로고    scopus 로고
    • A model for step-wise assembly of heterochromatin in yeast
    • discussion 56-62 163-169
    • Moazed D, Rudner AD, Huang J, Hoppe GJ, Tanny JC (2004) A model for step-wise assembly of heterochromatin in yeast. Novartis Found Symp 259: 48-56 discussion 56-62, 163-169
    • (2004) Novartis Found Symp , vol.259 , pp. 48-56
    • Moazed, D.1    Rudner, A.D.2    Huang, J.3    Hoppe, G.J.4    Tanny, J.C.5
  • 49
    • 0028004378 scopus 로고
    • Evidence that a complex of SIR proteins interacts with the silencer and telomere-binding protein RAP1
    • Moretti P, Freeman K, Coodly L, Shore D (1994) Evidence that a complex of SIR proteins interacts with the silencer and telomerebinding protein RAP1. Genes Dev 8: 2257-2269 (Pubitemid 24314288)
    • (1994) Genes and Development , vol.8 , Issue.19 , pp. 2257-2269
    • Moretti, P.1    Freeman, K.2    Coodly, L.3    Shore, D.4
  • 50
    • 0028586017 scopus 로고
    • Regulatable promoters of Saccharomyces cerevisiae: Comparison of transcriptional activity and their use for heterologous expression
    • Mumberg D, Muller R, Funk M (1994) Regulatable promoters of Saccharomyces cerevisiae: Comparison of transcriptional activity and their use for heterologous expression. Nucleic Acids Res 22: 5767-5768
    • (1994) Nucleic Acids Res , vol.22 , pp. 5767-5768
    • Mumberg, D.1    Muller, R.2    Funk, M.3
  • 51
    • 0242468006 scopus 로고    scopus 로고
    • The Sir4 C-terminal coiled coil is required for telomeric and mating type silencing in Saccharomyces cerevisiae
    • DOI 10.1016/j.jmb.2003.09.066
    • Murphy GA, Spedale EJ, Powell ST, Pillus L, Schultz SC, Chen L (2003) The Sir4 C-terminal coiled coil is required for telomeric and mating type silencing in Saccharomyces cerevisiae. J Mol Biol 334: 769-780 (Pubitemid 37433890)
    • (2003) Journal of Molecular Biology , vol.334 , Issue.4 , pp. 769-780
    • Murphy, G.A.1    Spedale, E.J.2    Powell, S.T.3    Pillus, L.4    Schultz, S.C.5    Chen, L.6
  • 53
    • 75149171523 scopus 로고    scopus 로고
    • Silent information regulator 3: The Goldilocks of the silencing complex
    • Norris A, Boeke JD (2010) Silent information regulator 3: The Goldilocks of the silencing complex. Genes Dev 24: 115-122
    • (2010) Genes Dev , vol.24 , pp. 115-122
    • Norris, A.1    Boeke, J.D.2
  • 54
    • 37349033583 scopus 로고    scopus 로고
    • Role of the conserved Sir3-BAH domain in nucleosome binding and silent chromatin assembly
    • DOI 10.1016/j.molcel.2007.12.004, PII S1097276507008416
    • Onishi M, Liou GG, Buchberger JR, Walz T, Moazed D (2007) Role of the conserved Sir3-BAH domain in nucleosome binding and silent chromatin assembly. Mol Cell 28: 1015-1028 (Pubitemid 350297032)
    • (2007) Molecular Cell , vol.28 , Issue.6 , pp. 1015-1028
    • Onishi, M.1    Liou, G.-G.2    Buchberger, J.R.3    Walz, T.4    Moazed, D.5
  • 58
    • 0027184524 scopus 로고
    • Silent domains are assembled continuously from the telomere and are defined by promoter distance and strength, and by SIR3 dosage
    • Renauld H, Aparicio OM, Zierath PD, Billington BL, Chhablani SK, Gottschling DE (1993) Silent domains are assembled continuously from the telomere and are defined by promoter distance and strength, and by SIR3 dosage. Genes Dev 7: 1133-1145 (Pubitemid 23207406)
    • (1993) Genes and Development , vol.7 , Issue.7 A , pp. 1133-1145
    • Renauld, H.1    Aparicio, O.M.2    Zierath, P.D.3    Billington, B.L.4    Chhablani, S.K.5    Gottschling, D.E.6
  • 59
    • 0023340731 scopus 로고
    • Four genes responsible for a position effect on expression from HML and HMR in Saccharomyces cerevisiae
    • Rine J, Herskowitz I (1987) Four genes responsible for a position effect on expression from HML and HMR in Saccharomyces cerevisiae. Genetics 116: 9-22
    • (1987) Genetics , vol.116 , pp. 9-22
    • Rine, J.1    Herskowitz, I.2
  • 60
    • 79551696674 scopus 로고    scopus 로고
    • Clustering heterochromatin: Sir3 promotes telomere clustering independently of silencing in yeast
    • Ruault M, De Meyer A, Loiodice I, Taddei A (2011) Clustering heterochromatin: Sir3 promotes telomere clustering independently of silencing in yeast. J Cell Biol 192: 417-431
    • (2011) J Cell Biol , vol.192 , pp. 417-431
    • Ruault, M.1    De Meyer, A.2    Loiodice, I.3    Taddei, A.4
  • 61
    • 18944384374 scopus 로고    scopus 로고
    • A nonhistone protein-protein interaction required for assembly of the SIR complex and silent chromatin
    • DOI 10.1128/MCB.25.11.4514-4528.2005
    • Rudner AD, Hall BE, Ellenberger T, Moazed D (2005) A nonhistone protein-protein interaction required for assembly of the SIR complex and silent chromatin. Mol Cell Biol 25: 4514-4528 (Pubitemid 40705757)
    • (2005) Molecular and Cellular Biology , vol.25 , Issue.11 , pp. 4514-4528
    • Rudner, A.D.1    Hall, B.E.2    Ellenberger, T.3    Moazed, D.4
  • 62
    • 0037636027 scopus 로고    scopus 로고
    • The establishment, inheritance, and function of silenced chromatin in Saccharomyces cerevisiae
    • DOI 10.1146/annurev.biochem.72.121801.161547
    • Rusche LN, Kirchmaier AL, Rine J (2003) The establishment, inheritance, and function of silenced chromatin in Saccharomyces cerevisiae. Annu Rev Biochem 72: 481-516 (Pubitemid 36930453)
    • (2003) Annual Review of Biochemistry , vol.72 , pp. 481-516
    • Rusche, L.N.1    Kirchmaier, A.L.2    Rine, J.3
  • 63
    • 66349093144 scopus 로고    scopus 로고
    • Mutational analysis of the Sir3 BAH domain reveals multiple points of interaction with nucleosomes
    • Sampath V, Yuan P,Wang IX, Prugar E, van Leeuwen F, Sternglanz R (2009) Mutational analysis of the Sir3 BAH domain reveals multiple points of interaction with nucleosomes. Mol Cell Biol 29: 2532-2545
    • (2009) Mol Cell Biol , vol.29 , pp. 2532-2545
    • Sampath, V.1    Yuan, P.2    Wang, I.X.3    Prugar, E.4    Van Leeuwen, F.5    Sternglanz, R.6
  • 64
    • 0026591791 scopus 로고
    • Active genes in budding yeast display enhanced in vivo accessibility to foreign DNA methylases: A novel in vivo probe for chromatin structure of yeast
    • Singh J, Klar AJ (1992) Active genes in budding yeast display enhanced in vivo accessibility to foreign DNA methylases: A novel in vivo probe for chromatin structure of yeast. Genes Dev 6: 186-196
    • (1992) Genes Dev , vol.6 , pp. 186-196
    • Singh, J.1    Klar, A.J.2
  • 65
    • 4744353204 scopus 로고    scopus 로고
    • Conformational changes induced by nucleotide binding in Cdc6/ORC from Aeropyrum pernix
    • DOI 10.1016/j.jmb.2004.08.044, PII S0022283604010241
    • Singleton MR, Morales R, Grainge I, Cook N, Isupov MN, Wigley DB (2004) Conformational changes induced by nucleotide binding in Cdc6/ORC from Aeropyrum pernix. J Mol Biol 343: 547-557 (Pubitemid 39311604)
    • (2004) Journal of Molecular Biology , vol.343 , Issue.3 , pp. 547-557
    • Singleton, M.R.1    Morales, R.2    Grainge, I.3    Cook, N.4    Isupov, M.N.5    Wigley, D.B.6
  • 67
    • 33747843430 scopus 로고    scopus 로고
    • HHsenser: Exhaustive transitive profile search using HMM-HMM comparison
    • DOI 10.1093/nar/gkl195
    • Soding J, Remmert M, Biegert A, Lupas AN (2006) HHsenser: Exhaustive transitive profile search using HMM-HMM comparison. Nucleic Acids Res 34(Web Server issue): W374-W378 (Pubitemid 44529796)
    • (2006) Nucleic Acids Research , vol.34 , Issue.WEB. SERV. ISS.
    • Soding, J.1    Remmert, M.2    Biegert, A.3    Lupas, A.N.4
  • 68
    • 0031027431 scopus 로고    scopus 로고
    • SIR2 and SIR4 interactions differ in core and extended telomeric heterochromatin in yeast
    • Strahl-Bolsinger S, Hecht A, Luo K, Grunstein M (1997) SIR2 and SIR4 interactions differ in core and extended telomeric heterochromatin in yeast. Genes Dev 11: 83-93 (Pubitemid 27043826)
    • (1997) Genes and Development , vol.11 , Issue.1 , pp. 83-93
    • Strahl-Bolsinger, S.1    Hecht, A.2    Luo, K.3    Grunstein, M.4
  • 69
    • 0034839973 scopus 로고    scopus 로고
    • Highly specific antibodies determine histone acetylation site usage in yeast heterochromatin and euchromatin
    • DOI 10.1016/S1097-2765(01)00301-X
    • Suka N, Suka Y, Carmen AA, Wu J, Grunstein M (2001) Highly specific antibodies determine histone acetylation site usage in yeast heterochromatin and euchromatin. Mol Cell 8: 473-479 (Pubitemid 32831564)
    • (2001) Molecular Cell , vol.8 , Issue.2 , pp. 473-479
    • Suka, N.1    Suka, Y.2    Carmen, A.A.3    Wu, J.4    Grunstein, M.5
  • 70
    • 0033598942 scopus 로고    scopus 로고
    • An enzymatic activity in the yeast Sir2 protein that is essential for gene silencing
    • Tanny JC, Dowd GJ, Huang J, Hilz H, Moazed D (1999) An enzymatic activity in the yeast Sir2 protein that is essential for gene silencing. Cell 99: 735-745 (Pubitemid 30017644)
    • (1999) Cell , vol.99 , Issue.7 , pp. 735-745
    • Tanny, J.C.1    Dowd, G.J.2    Huang, J.3    Hilz, H.4    Moazed, D.5
  • 71
    • 3543038804 scopus 로고    scopus 로고
    • Budding yeast silencing complexes and regulation of Sir2 activity by protein-protein interactions
    • DOI 10.1128/MCB.24.16.6931-6946.2004
    • Tanny JC, Kirkpatrick DS, Gerber SA, Gygi SP, Moazed D (2004) Budding yeast silencing complexes and regulation of Sir2 activity by protein-protein interactions. Mol Cell Biol 24: 6931-6946 (Pubitemid 39014422)
    • (2004) Molecular and Cellular Biology , vol.24 , Issue.16 , pp. 6931-6946
    • Tanny, J.C.1    Kirkpatrick, D.S.2    Gerber, S.A.3    Gygi, S.P.4    Moazed, D.5
  • 72
    • 0030964526 scopus 로고    scopus 로고
    • Silencing factors participate in DNA repair and rscombination in Saccharomyces cersvisiae
    • DOI 10.1038/42288
    • Tsukamoto Y, Kato J, Ikeda H (1997) Silencing factors participate in DNA repair and recombination in Saccharomyces cerevisiae. Nature 388: 900-903 (Pubitemid 27377065)
    • (1997) Nature , vol.388 , Issue.6645 , pp. 900-903
    • Tsukamoto, Y.1    Kato, J.-I.2    Ikeda, H.3
  • 73
    • 0037077178 scopus 로고    scopus 로고
    • Dot1p modulates silencing in yeast by methylation of the nucleosome core
    • DOI 10.1016/S0092-8674(02)00759-6
    • van Leeuwen F, Gafken PR, Gottschling DE (2002) Dot1p modulates silencing in yeast by methylation of the nucleosome core. Cell 109: 745-756 (Pubitemid 34727348)
    • (2002) Cell , vol.109 , Issue.6 , pp. 745-756
    • Van Leeuwen, F.1    Gafken, P.R.2    Gottschling, D.E.3
  • 74
    • 33845393998 scopus 로고    scopus 로고
    • Bypassing the catalytic activity of SIR2 for SIR protein spreading in Saccharomyces cerevisiae
    • DOI 10.1091/mbc.E06-08-0669
    • Yang B, Kirchmaier AL (2006) Bypassing the catalytic activity of SIR2 for SIR protein spreading in Saccharomyces cerevisiae. Mol Biol Cell 17: 5287-5297 (Pubitemid 44907369)
    • (2006) Molecular Biology of the Cell , vol.17 , Issue.12 , pp. 5287-5297
    • Yang, B.1    Kirchmaier, A.L.2


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