-
1
-
-
79960936612
-
Multifunctional cationic host defence peptides and their clinical applications
-
A.T. Yeung, S.L. Gellatly, and R.E.W. Hancock Multifunctional cationic host defence peptides and their clinical applications Cell. Mol. Life Sci. 68 2011 2161 2176
-
(2011)
Cell. Mol. Life Sci.
, vol.68
, pp. 2161-2176
-
-
Yeung, A.T.1
Gellatly, S.L.2
Hancock, R.E.W.3
-
2
-
-
77958085274
-
Describing the mechanism of antimicrobial peptide action with the interfacial activity model
-
W.C. Wimley Describing the mechanism of antimicrobial peptide action with the interfacial activity model ACS Chem. Biol. 5 2010 905 917
-
(2010)
ACS Chem. Biol.
, vol.5
, pp. 905-917
-
-
Wimley, W.C.1
-
3
-
-
77950499848
-
Potential therapeutic application of host defense peptides
-
A. Giuliani, A.C. Rinaldi, Methods in Molecular Biology Springer
-
L. Zhang, and T.J. Falla Potential therapeutic application of host defense peptides A. Giuliani, A.C. Rinaldi, Antimicrobial Peptides Methods in Molecular Biology 618 2010 Springer 303 327
-
(2010)
Antimicrobial Peptides
, vol.618
, pp. 303-327
-
-
Zhang, L.1
Falla, T.J.2
-
4
-
-
80051546187
-
Will new generations of modified antimicrobial peptides improve their potential as pharmaceuticals?
-
N.K. Brogden, and K.A. Brogden Will new generations of modified antimicrobial peptides improve their potential as pharmaceuticals? Int. J. Antimicrob. Agents 38 2011 217 225
-
(2011)
Int. J. Antimicrob. Agents
, vol.38
, pp. 217-225
-
-
Brogden, N.K.1
Brogden, K.A.2
-
6
-
-
77955846576
-
Structural determinants of host defense peptides for antimicrobial activity and target cell selectivity
-
D. Takahashi, S.K. Shukla, O. Prakash, and G. Zhang Structural determinants of host defense peptides for antimicrobial activity and target cell selectivity Biochimie 92 2010 1236 1241
-
(2010)
Biochimie
, vol.92
, pp. 1236-1241
-
-
Takahashi, D.1
Shukla, S.K.2
Prakash, O.3
Zhang, G.4
-
7
-
-
0029873933
-
Structure and orientation of the mammalian antibacterial peptide cecropin P1 within phospholipid membranes
-
E. Gazit, I.R. Miller, P.C. Biggin, M.S. Sansom, and Y. Shai Structure and orientation of the mammalian antibacterial peptide cecropin P1 within phospholipid membranes J. Mol. Biol. 258 1996 860 870
-
(1996)
J. Mol. Biol.
, vol.258
, pp. 860-870
-
-
Gazit, E.1
Miller, I.R.2
Biggin, P.C.3
Sansom, M.S.4
Shai, Y.5
-
8
-
-
0028208901
-
Orientational and aggregational states of magainin2 in phospholipid bilayers
-
K. Matsuzaki, O. Murase, H. Tokuda, S. Funakoshi, N. Fujii, and K. Miyajima Orientational and aggregational states of magainin2 in phospholipid bilayers Biochemistry 33 1994 3342 3349
-
(1994)
Biochemistry
, vol.33
, pp. 3342-3349
-
-
Matsuzaki, K.1
Murase, O.2
Tokuda, H.3
Funakoshi, S.4
Fujii, N.5
Miyajima, K.6
-
9
-
-
0029904095
-
Membrane pores induced by magainin
-
S.J. Ludtke, K. He, W.T. Heller, T.A. Harroun, L. Yang, and H.W. Huang Membrane pores induced by magainin Biochemistry 35 1996 13,723 13,728
-
(1996)
Biochemistry
, vol.35
, pp. 13
-
-
Ludtke, S.J.1
He, K.2
Heller, W.T.3
Harroun, T.A.4
Yang, L.5
Huang, H.W.6
-
10
-
-
70349634702
-
Different mechanisms of action of antimicrobial peptides: Insights from fluorescence spectroscopy experiments and molecular dynamics simulations
-
G. Bocchinfuso, A. Palleschi, B. Orioni, G. Grande, F. Formaggio, C. Toniolo, Y. Park, K.S. Hahm, and L. Stella Different mechanisms of action of antimicrobial peptides: insights from fluorescence spectroscopy experiments and molecular dynamics simulations J. Pept. Sci. 15 2009 550 558
-
(2009)
J. Pept. Sci.
, vol.15
, pp. 550-558
-
-
Bocchinfuso, G.1
Palleschi, A.2
Orioni, B.3
Grande, G.4
Formaggio, F.5
Toniolo, C.6
Park, Y.7
Hahm, K.S.8
Stella, L.9
-
12
-
-
34447322795
-
The history of alamethicin: A review of the most extensively studied peptaibol
-
B. Leitgeb, A. Szekeres, L. Manczinger, C. Vágvölgyi, and L. Kredics The history of alamethicin: a review of the most extensively studied peptaibol Chem. Biodivers. 4 2007 1027 1051
-
(2007)
Chem. Biodivers.
, vol.4
, pp. 1027-1051
-
-
Leitgeb, B.1
Szekeres, A.2
Manczinger, L.3
Vágvölgyi, C.4
Kredics, L.5
-
13
-
-
0016311447
-
A molecular model of membrane excitability
-
G. Baumann, and P. Mueller A molecular model of membrane excitability J. Supramol. Struct. 2 1974 538 557
-
(1974)
J. Supramol. Struct.
, vol.2
, pp. 538-557
-
-
Baumann, G.1
Mueller, P.2
-
14
-
-
0016183539
-
Statistical analysis of alamethicin channels in black lipid membranes
-
G. Boheim Statistical analysis of alamethicin channels in black lipid membranes J. Membr. Biol. 19 1974 277 303
-
(1974)
J. Membr. Biol.
, vol.19
, pp. 277-303
-
-
Boheim, G.1
-
15
-
-
0020360086
-
A voltage-gated ion channel model inferred from the crystal structure of alamethicin at 1.5 Å resolution
-
R.O. Fox, and F.M. Richards A voltage-gated ion channel model inferred from the crystal structure of alamethicin at 1.5 Å resolution Nature 300 1982 325 330
-
(1982)
Nature
, vol.300
, pp. 325-330
-
-
Fox, R.O.1
Richards, F.M.2
-
16
-
-
0028226051
-
Alamethicin: A peptide model for voltage gating and protein-membrane interactions
-
D.S. Cafiso Alamethicin: a peptide model for voltage gating and protein-membrane interactions Annu. Rev. Biophys. Biomol. Struct. 23 1994 141 165
-
(1994)
Annu. Rev. Biophys. Biomol. Struct.
, vol.23
, pp. 141-165
-
-
Cafiso, D.S.1
-
17
-
-
0028010959
-
The barrel-stave model as applied to alamethicin and its analogs reevaluated
-
D.R. Laver The barrel-stave model as applied to alamethicin and its analogs reevaluated Biophys. J. 66 1994 355 359
-
(1994)
Biophys. J.
, vol.66
, pp. 355-359
-
-
Laver, D.R.1
-
18
-
-
0035498468
-
Voltage-dependent pore formation and antimicrobial activity by alamethicin and analogues
-
H. Duclohier, and H. Wróblewski Voltage-dependent pore formation and antimicrobial activity by alamethicin and analogues J. Membr. Biol. 184 2001 1 12
-
(2001)
J. Membr. Biol.
, vol.184
, pp. 1-12
-
-
Duclohier, H.1
Wróblewski, H.2
-
19
-
-
34447338326
-
Alamethicin interaction with lipid membranes: A spectroscopic study on synthetic analogues
-
L. Stella, M. Burattini, C. Mazzuca, A. Palleschi, M. Venanzi, C. Baldini, F. Formaggio, C. Toniolo, and B. Pispisa Alamethicin interaction with lipid membranes: a spectroscopic study on synthetic analogues Chem. Biodivers. 4 2007 1299 1312
-
(2007)
Chem. Biodivers.
, vol.4
, pp. 1299-1312
-
-
Stella, L.1
Burattini, M.2
Mazzuca, C.3
Palleschi, A.4
Venanzi, M.5
Baldini, C.6
Formaggio, F.7
Toniolo, C.8
Pispisa, B.9
-
20
-
-
84859590055
-
Observing a model ion channel gating action in model cell membranes in real time in situ: Membrane potential change induced alamethicin orientation change
-
S. Ye, H. Li, F. Wei, J. Jasensky, A.P. Boughton, P. Yang, and Z. Chen Observing a model ion channel gating action in model cell membranes in real time in situ: membrane potential change induced alamethicin orientation change J. Am. Chem. Soc. 134 2012 6237 6243
-
(2012)
J. Am. Chem. Soc.
, vol.134
, pp. 6237-6243
-
-
Ye, S.1
Li, H.2
Wei, F.3
Jasensky, J.4
Boughton, A.P.5
Yang, P.6
Chen, Z.7
-
21
-
-
53049090332
-
A dynamic view of peptides and proteins in membranes
-
B. Bechinger A dynamic view of peptides and proteins in membranes Cell. Mol. Life Sci. 65 2008 3028 3039
-
(2008)
Cell. Mol. Life Sci.
, vol.65
, pp. 3028-3039
-
-
Bechinger, B.1
-
22
-
-
74549185814
-
Solid-state NMR approaches to measure topological equilibria and dynamics of membrane polypeptides
-
E. Salnikov, C. Aisenbrey, V. Vidovic, and B. Bechinger Solid-state NMR approaches to measure topological equilibria and dynamics of membrane polypeptides Biochim. Biophys. Acta 1798 2010 258 265
-
(2010)
Biochim. Biophys. Acta
, vol.1798
, pp. 258-265
-
-
Salnikov, E.1
Aisenbrey, C.2
Vidovic, V.3
Bechinger, B.4
-
23
-
-
70349649092
-
Trichogin GA IV: An antibacterial and protease-resistant peptide
-
M. De Zotti, B. Biondi, F. Formaggio, C. Toniolo, L. Stella, Y. Park, and K.-S. Hahm Trichogin GA IV: an antibacterial and protease-resistant peptide J. Pept. Sci. 15 2009 615 619
-
(2009)
J. Pept. Sci.
, vol.15
, pp. 615-619
-
-
De Zotti, M.1
Biondi, B.2
Formaggio, F.3
Toniolo, C.4
Stella, L.5
Park, Y.6
Hahm, K.-S.7
-
24
-
-
0026519219
-
Trichogin A IV, an 11-residue lipopeptaibol from Trichoderma longibrachiatum
-
C. Auvin-Guette, S. Rebuffat, Y. Prigent, and B. Bodo Trichogin A IV, an 11-residue lipopeptaibol from Trichoderma longibrachiatum J. Am. Chem. Soc. 114 1992 2170 2172
-
(1992)
J. Am. Chem. Soc.
, vol.114
, pp. 2170-2172
-
-
Auvin-Guette, C.1
Rebuffat, S.2
Prigent, Y.3
Bodo, B.4
-
25
-
-
0345601986
-
Trichogin: A paradigm for lipopeptaibols
-
C. Peggion, F. Formaggio, M. Crisma, R.F. Epand, R.M. Epand, and C. Toniolo Trichogin: a paradigm for lipopeptaibols J. Pept. Sci. 9 2003 679 689
-
(2003)
J. Pept. Sci.
, vol.9
, pp. 679-689
-
-
Peggion, C.1
Formaggio, F.2
Crisma, M.3
Epand, R.F.4
Epand, R.M.5
Toniolo, C.6
-
26
-
-
34447331955
-
Multinuclear solid-state-NMR and FT-IR-absorption investigations on lipid/trichogin bilayers
-
C. Heuber, F. Formaggio, C. Baldini, C. Toniolo, and K. Müller Multinuclear solid-state-NMR and FT-IR-absorption investigations on lipid/trichogin bilayers Chem. Biodivers. 4 2007 1200 1218
-
(2007)
Chem. Biodivers.
, vol.4
, pp. 1200-1218
-
-
Heuber, C.1
Formaggio, F.2
Baldini, C.3
Toniolo, C.4
Müller, K.5
-
27
-
-
0028674861
-
Structure determination of racemic trigogin A IV using centrosymmetric crystals
-
C. Toniolo, C. Peggion, M. Crisma, F. Formaggio, X. Shui, and D.S. Eggleston Structure determination of racemic trigogin A IV using centrosymmetric crystals Nat. Struct. Biol. 1 1994 908 914
-
(1994)
Nat. Struct. Biol.
, vol.1
, pp. 908-914
-
-
Toniolo, C.1
Peggion, C.2
Crisma, M.3
Formaggio, F.4
Shui, X.5
Eggleston, D.S.6
-
28
-
-
0033198081
-
Orientation and immersion depth of a helical lipopeptaibol in membranes using TOAC as an ESR probe
-
V. Monaco, F. Formaggio, M. Crisma, C. Toniolo, P. Hanson, and G.L. Millhauser Orientation and immersion depth of a helical lipopeptaibol in membranes using TOAC as an ESR probe Biopolymers 50 1999 239 253
-
(1999)
Biopolymers
, vol.50
, pp. 239-253
-
-
Monaco, V.1
Formaggio, F.2
Crisma, M.3
Toniolo, C.4
Hanson, P.5
Millhauser, G.L.6
-
29
-
-
0034716774
-
Self-assembling properties of membrane-modifying peptides studied by PELDOR and CW-ESR spectroscopies
-
A.D. Milov, Yu.D. Tsvetkov, F. Formaggio, M. Crisma, C. Toniolo, and J. Raap Self-assembling properties of membrane-modifying peptides studied by PELDOR and CW-ESR spectroscopies J. Am. Chem. Soc. 122 2000 3843 3848
-
(2000)
J. Am. Chem. Soc.
, vol.122
, pp. 3843-3848
-
-
Milov, A.D.1
Tsvetkov, Yu.D.2
Formaggio, F.3
Crisma, M.4
Toniolo, C.5
Raap, J.6
-
30
-
-
0345169924
-
Self-assembling and membrane modifying properties of a lipopeptaibol studied by CW-ESR and PELDOR spectroscopies
-
A.D. Milov, Y.D. Tsvetkov, F. Formaggio, M. Crisma, C. Toniolo, and J. Raap Self-assembling and membrane modifying properties of a lipopeptaibol studied by CW-ESR and PELDOR spectroscopies J. Pept. Sci. 9 2003 690 700
-
(2003)
J. Pept. Sci.
, vol.9
, pp. 690-700
-
-
Milov, A.D.1
Tsvetkov, Y.D.2
Formaggio, F.3
Crisma, M.4
Toniolo, C.5
Raap, J.6
-
31
-
-
33746807794
-
Location and aggregation of the spin-labeled peptide trichogin GA IV in a phospholipid membrane as revealed by pulsed EPR
-
E.S. Salnikov, D.A. Erilov, A.D. Milov, Y.D. Tsvetkov, C. Peggion, F. Formaggio, C. Toniolo, J. Raap, and S.A. Dzuba Location and aggregation of the spin-labeled peptide trichogin GA IV in a phospholipid membrane as revealed by pulsed EPR Biophys. J. 91 2006 1532 1540
-
(2006)
Biophys. J.
, vol.91
, pp. 1532-1540
-
-
Salnikov, E.S.1
Erilov, D.A.2
Milov, A.D.3
Tsvetkov, Y.D.4
Peggion, C.5
Formaggio, F.6
Toniolo, C.7
Raap, J.8
Dzuba, S.A.9
-
32
-
-
77957121814
-
Small-amplitude backbone motions of the spin-labeled lipopeptide trichogin GA IV in a lipid membrane as revealed by electron spin echo
-
V.N. Syryamina, N.P. Isaev, C. Peggion, F. Formaggio, C. Toniolo, J. Raap, and S.A. Dzuba Small-amplitude backbone motions of the spin-labeled lipopeptide trichogin GA IV in a lipid membrane as revealed by electron spin echo J. Phys. Chem. B 114 2010 12,277 12,283
-
(2010)
J. Phys. Chem. B
, vol.114
, pp. 12
-
-
Syryamina, V.N.1
Isaev, N.P.2
Peggion, C.3
Formaggio, F.4
Toniolo, C.5
Raap, J.6
Dzuba, S.A.7
-
33
-
-
84862076972
-
A molecular view on the role of cholesterol upon membrane insertion, aggregation, and water accessibility of the antibiotic lipopeptide trichogin GA IV as revealed by EPR
-
V.N. Syryamina, M. De Zotti, C. Peggion, F. Formaggio, C. Toniolo, J. Raap, and S.A. Dzuba A molecular view on the role of cholesterol upon membrane insertion, aggregation, and water accessibility of the antibiotic lipopeptide trichogin GA IV as revealed by EPR J. Phys. Chem. B 116 2012 5653 5660
-
(2012)
J. Phys. Chem. B
, vol.116
, pp. 5653-5660
-
-
Syryamina, V.N.1
De Zotti, M.2
Peggion, C.3
Formaggio, F.4
Toniolo, C.5
Raap, J.6
Dzuba, S.A.7
-
34
-
-
1142298536
-
Aggregation and water-membrane partition as major determinants of the activity of the antibiotic peptide trichogin GA IV
-
L. Stella, C. Mazzuca, M. Venanzi, A. Palleschi, M. Didonè, F. Formaggio, C. Toniolo, and B. Pispisa Aggregation and water-membrane partition as major determinants of the activity of the antibiotic peptide trichogin GA IV Biophys. J. 86 2004 936 945
-
(2004)
Biophys. J.
, vol.86
, pp. 936-945
-
-
Stella, L.1
Mazzuca, C.2
Venanzi, M.3
Palleschi, A.4
Didonè, M.5
Formaggio, F.6
Toniolo, C.7
Pispisa, B.8
-
35
-
-
17844400564
-
Mechanism of membrane activity of the antibiotic trichogin GA IV: A two-state transition controlled by peptide concentration
-
C. Mazzuca, L. Stella, M. Venanzi, F. Formaggio, C. Toniolo, and B. Pispisa Mechanism of membrane activity of the antibiotic trichogin GA IV: a two-state transition controlled by peptide concentration Biophys. J. 88 2005 3411 3421
-
(2005)
Biophys. J.
, vol.88
, pp. 3411-3421
-
-
Mazzuca, C.1
Stella, L.2
Venanzi, M.3
Formaggio, F.4
Toniolo, C.5
Pispisa, B.6
-
36
-
-
33751254738
-
Effect of peptide lipidation on membrane perturbing activity: A comparative study on two trichogin analogues
-
E. Gatto, C. Mazzuca, L. Stella, M. Venanzi, C. Toniolo, and B. Pispisa Effect of peptide lipidation on membrane perturbing activity: a comparative study on two trichogin analogues J. Phys. Chem. B 110 2006 22,813 22,818
-
(2006)
J. Phys. Chem. B
, vol.110
, pp. 22
-
-
Gatto, E.1
Mazzuca, C.2
Stella, L.3
Venanzi, M.4
Toniolo, C.5
Pispisa, B.6
-
37
-
-
33751208605
-
Peptide folding dynamics: A time-resolved study from the nanosecond to the microsecond time regime
-
M. Venanzi, E. Gatto, G. Bocchinfuso, A. Palleschi, L. Stella, C. Baldini, F. Formaggio, and C. Toniolo Peptide folding dynamics: a time-resolved study from the nanosecond to the microsecond time regime J. Phys. Chem. B 110 2006 22,834 22,841
-
(2006)
J. Phys. Chem. B
, vol.110
, pp. 22
-
-
Venanzi, M.1
Gatto, E.2
Bocchinfuso, G.3
Palleschi, A.4
Stella, L.5
Baldini, C.6
Formaggio, F.7
Toniolo, C.8
-
38
-
-
30444454846
-
Dynamics of formation of a helix-turn-helix structure in a membrane-active peptide: A time-resolved spectroscopic study
-
M. Venanzi, E. Gatto, G. Bocchinfuso, A. Palleschi, L. Stella, F. Formaggio, and C. Toniolo Dynamics of formation of a helix-turn-helix structure in a membrane-active peptide: a time-resolved spectroscopic study Chembiochem 7 2006 43 45
-
(2006)
Chembiochem
, vol.7
, pp. 43-45
-
-
Venanzi, M.1
Gatto, E.2
Bocchinfuso, G.3
Palleschi, A.4
Stella, L.5
Formaggio, F.6
Toniolo, C.7
-
39
-
-
59649106670
-
Metal binding properties of fluorescent analogues of trichogin GA IV: A conformational study by time-resolved spectroscopy and molecular mechanics investigations
-
M. Venanzi, G. Bocchinfuso, E. Gatto, A. Palleschi, L. Stella, F. Formaggio, and C. Toniolo Metal binding properties of fluorescent analogues of trichogin GA IV: a conformational study by time-resolved spectroscopy and molecular mechanics investigations Chembiochem 10 2009 91 97
-
(2009)
Chembiochem
, vol.10
, pp. 91-97
-
-
Venanzi, M.1
Bocchinfuso, G.2
Gatto, E.3
Palleschi, A.4
Stella, L.5
Formaggio, F.6
Toniolo, C.7
-
40
-
-
77957355966
-
Fluctuations and the rate-limiting step of peptide-induced membrane leakage
-
C. Mazzuca, B. Orioni, M. Coletta, F. Formaggio, C. Toniolo, G. Maulucci, M. De Spirito, B. Pispisa, M. Venanzi, and L. Stella Fluctuations and the rate-limiting step of peptide-induced membrane leakage Biophys. J. 99 2010 1791 1800
-
(2010)
Biophys. J.
, vol.99
, pp. 1791-1800
-
-
Mazzuca, C.1
Orioni, B.2
Coletta, M.3
Formaggio, F.4
Toniolo, C.5
Maulucci, G.6
De Spirito, M.7
Pispisa, B.8
Venanzi, M.9
Stella, L.10
-
41
-
-
79960714064
-
A new approach to detect and study ion channel formation in microBLMs
-
S. Smeazzetto, M. De Zotti, and M.R. Moncelli A new approach to detect and study ion channel formation in microBLMs Electrochem. Commun. 13 2011 834 836
-
(2011)
Electrochem. Commun.
, vol.13
, pp. 834-836
-
-
Smeazzetto, S.1
De Zotti, M.2
Moncelli, M.R.3
-
42
-
-
84859902402
-
Probing membrane permeabilization by the antibiotic lipopeptaibol trichogin GA IV in a tethered bilayer lipid membrane
-
L. Becucci, F. Maran, and R. Guidelli Probing membrane permeabilization by the antibiotic lipopeptaibol trichogin GA IV in a tethered bilayer lipid membrane Biochim. Biophys. Acta 1818 2012 1656 1662
-
(2012)
Biochim. Biophys. Acta
, vol.1818
, pp. 1656-1662
-
-
Becucci, L.1
Maran, F.2
Guidelli, R.3
-
43
-
-
0033573155
-
The antimicrobial peptide trichogin and its interaction with phospholipid membranes
-
R.F. Epand, R.M. Epand, V. Monaco, S. Stoia, F. Formaggio, M. Crisma, and C. Toniolo The antimicrobial peptide trichogin and its interaction with phospholipid membranes Eur. J. Biochem. 266 1999 1021 1028
-
(1999)
Eur. J. Biochem.
, vol.266
, pp. 1021-1028
-
-
Epand, R.F.1
Epand, R.M.2
Monaco, V.3
Stoia, S.4
Formaggio, F.5
Crisma, M.6
Toniolo, C.7
-
44
-
-
0037164698
-
Ion transport across a phospholipid membrane mediated by the peptide trichogin GA IV
-
T.N. Kropacheva, and J. Raap Ion transport across a phospholipid membrane mediated by the peptide trichogin GA IV Biochim. Biophys. Acta 1567 2002 193 203
-
(2002)
Biochim. Biophys. Acta
, vol.1567
, pp. 193-203
-
-
Kropacheva, T.N.1
Raap, J.2
-
45
-
-
33644644163
-
Insertion and assembly of membrane proteins via simulation
-
P.J. Bond, and M.S.P. Sansom Insertion and assembly of membrane proteins via simulation J. Am. Chem. Soc. 128 2006 2697 2704
-
(2006)
J. Am. Chem. Soc.
, vol.128
, pp. 2697-2704
-
-
Bond, P.J.1
Sansom, M.S.P.2
-
46
-
-
33846842302
-
Self-assembling of peptide/membrane complexes by atomistic molecular dynamics simulations
-
S. Esteban-Martin, and J. Salgado Self-assembling of peptide/membrane complexes by atomistic molecular dynamics simulations Biophys. J. 92 2007 903 912
-
(2007)
Biophys. J.
, vol.92
, pp. 903-912
-
-
Esteban-Martin, S.1
Salgado, J.2
-
47
-
-
68149154954
-
Membrane perturbation by the antimicrobial peptide PMAP-23: A fluorescence and molecular dynamics study
-
B. Orioni, G. Bocchinfuso, J.Y. Kim, A. Palleschi, G. Grande, S. Bobone, Y. Park, J.I. Kim, K.S. Hahm, and L. Stella Membrane perturbation by the antimicrobial peptide PMAP-23: a fluorescence and molecular dynamics study Biochim. Biophys. Acta 1788 2009 1523 1533
-
(2009)
Biochim. Biophys. Acta
, vol.1788
, pp. 1523-1533
-
-
Orioni, B.1
Bocchinfuso, G.2
Kim, J.Y.3
Palleschi, A.4
Grande, G.5
Bobone, S.6
Park, Y.7
Kim, J.I.8
Hahm, K.S.9
Stella, L.10
-
48
-
-
79960953216
-
Fluorescence spectroscopy and molecular dynamics simulations in studies on the mechanism of membrane destabilization by antimicrobial peptides
-
G. Bocchinfuso, S. Bobone, A. Palleschi, and L. Stella Fluorescence spectroscopy and molecular dynamics simulations in studies on the mechanism of membrane destabilization by antimicrobial peptides Cell. Mol. Life Sci. 68 2011 2281 2301
-
(2011)
Cell. Mol. Life Sci.
, vol.68
, pp. 2281-2301
-
-
Bocchinfuso, G.1
Bobone, S.2
Palleschi, A.3
Stella, L.4
-
49
-
-
84862965062
-
Trichogin GA IV: A versatile template for the synthesis of novel peptaibiotics
-
M. De Zotti, B. Biondi, C. Peggion, F. Formaggio, Y. Park, K.-S. Hahm, and C. Toniolo Trichogin GA IV: a versatile template for the synthesis of novel peptaibiotics Org. Biomol. Chem. 10 2012 1285 1299
-
(2012)
Org. Biomol. Chem.
, vol.10
, pp. 1285-1299
-
-
De Zotti, M.1
Biondi, B.2
Peggion, C.3
Formaggio, F.4
Park, Y.5
Hahm, K.-S.6
Toniolo, C.7
-
50
-
-
0026203477
-
The use of contrast variation in the specular reflection of neutrons from interfaces
-
T. Crowley, E. Lee, E. Simister, and R. Thomas The use of contrast variation in the specular reflection of neutrons from interfaces Physica B 173 1991 143 156
-
(1991)
Physica B
, vol.173
, pp. 143-156
-
-
Crowley, T.1
Lee, E.2
Simister, E.3
Thomas, R.4
-
52
-
-
84915486634
-
Neutron scattering lengths and cross sections
-
V. Sears Neutron scattering lengths and cross sections Neutron News 3 1992 26 37
-
(1992)
Neutron News
, vol.3
, pp. 26-37
-
-
Sears, V.1
-
53
-
-
0026512750
-
Formation of supported planar bilayers by fusion of vesicles to supported phospholipid monolayers
-
E. Kalb, S. Frey, and L.K. Tamm Formation of supported planar bilayers by fusion of vesicles to supported phospholipid monolayers Biochim. Biophys. Acta 1103 1992 307 316
-
(1992)
Biochim. Biophys. Acta
, vol.1103
, pp. 307-316
-
-
Kalb, E.1
Frey, S.2
Tamm, L.K.3
-
54
-
-
11644271678
-
The application of the specular reflection of neutrons to the study of surfaces and interfaces
-
J. Penfold, and R. Thomas The application of the specular reflection of neutrons to the study of surfaces and interfaces J. Phys. Condens. Matter 2 1990 1369
-
(1990)
J. Phys. Condens. Matter
, vol.2
, pp. 1369
-
-
Penfold, J.1
Thomas, R.2
-
55
-
-
26144449160
-
Surface studies of solids by total reflection of X-rays
-
L.G. Parratt Surface studies of solids by total reflection of X-rays Phys. Rev. 95 1954 359 369
-
(1954)
Phys. Rev.
, vol.95
, pp. 359-369
-
-
Parratt, L.G.1
-
56
-
-
0003935859
-
MINUIT Minimization Package
-
CERN Program Library Geneva
-
F. James MINUIT Minimization Package Reference Manual 1994 CERN Program Library Geneva
-
(1994)
Reference Manual
-
-
James, F.1
-
59
-
-
46249092554
-
GROMACS 4: Algorithms for highly efficient, load-balanced, and scalable molecular simulation
-
B. Hess, C. Kutzner, D. van der Spoel, and E. Lindahl GROMACS 4: algorithms for highly efficient, load-balanced, and scalable molecular simulation J. Chem. Theory Comput. 4 2008 435 447
-
(2008)
J. Chem. Theory Comput.
, vol.4
, pp. 435-447
-
-
Hess, B.1
Kutzner, C.2
Van Der Spoel, D.3
Lindahl, E.4
-
60
-
-
36248975150
-
-
D. van der Spoel, E. Lindahl, B. Hess, A.R. van Buuren, E. Apol, P.J. Meulenhoff, D.P. Tieleman, A.L.T.M. Sijbers, K.A. Feenstra, R. van Drunen, and H.J.C. Berendsen Gromacs User Manual Version 4.5.4 www.gromacs.org 2010
-
(2010)
Gromacs User Manual Version 4.5.4
-
-
Van Der Spoel, D.1
Lindahl, E.2
Hess, B.3
Van Buuren, A.R.4
Apol, E.5
Meulenhoff, P.J.6
Tieleman, D.P.7
Sijbers, A.L.T.M.8
Feenstra, K.A.9
Van Drunen, R.10
Berendsen, H.J.C.11
-
61
-
-
33750587438
-
Molecular dynamics with coupling to an external bath
-
H.J.C. Berendsen, J.P.M. Postma, W.F. van Gunsteren, A. Di Nola, and J.R. Haak Molecular dynamics with coupling to an external bath J. Chem. Phys. 81 1984 3684 3690
-
(1984)
J. Chem. Phys.
, vol.81
, pp. 3684-3690
-
-
Berendsen, H.J.C.1
Postma, J.P.M.2
Van Gunsteren, W.F.3
Di Nola, A.4
Haak, J.R.5
-
63
-
-
33646446451
-
Structure of fully hydrated fluid phase lipid bilayers with monounsaturated chains
-
N. Kučerka, S. Tristram-Nagle, and J.F. Nagle Structure of fully hydrated fluid phase lipid bilayers with monounsaturated chains J. Membr. Biol. 208 2005 193 202
-
(2005)
J. Membr. Biol.
, vol.208
, pp. 193-202
-
-
Kučerka, N.1
Tristram-Nagle, S.2
Nagle, J.F.3
-
64
-
-
23844514081
-
Structure and fluctuations of a single floating lipid bilayer
-
J. Daillant Structure and fluctuations of a single floating lipid bilayer Proc. Natl. Acad. Sci. U. S. A. 102 2005 11,639 11,644
-
(2005)
Proc. Natl. Acad. Sci. U. S. A.
, vol.102
, pp. 11
-
-
Daillant, J.1
-
65
-
-
0030038849
-
Structure, energetics, and dynamics of lipid-protein interactions: A molecular dynamics study of the gramicidin a channel in a DMPC bilayer
-
T.B. Woolf, and B. Roux Structure, energetics, and dynamics of lipid-protein interactions: a molecular dynamics study of the gramicidin a channel in a DMPC bilayer Proteins 24 1996 92 114
-
(1996)
Proteins
, vol.24
, pp. 92-114
-
-
Woolf, T.B.1
Roux, B.2
-
66
-
-
41149134824
-
Automated builder and database of protein/membrane complexes for molecular dynamics simulations
-
S. Jo, T. Kim, and W. Im Automated builder and database of protein/membrane complexes for molecular dynamics simulations PLoS One 2007 e880
-
(2007)
PLoS One
, pp. 880
-
-
Jo, S.1
Kim, T.2
Im, W.3
-
68
-
-
0033035249
-
An alamethicin channel in a lipid bilayer: Molecular dynamics simulations
-
D.P. Tieleman, H.J.C. Berendsen, and M.S.P. Sansom An alamethicin channel in a lipid bilayer: molecular dynamics simulations Biophys. J. 76 1999 1757 1769
-
(1999)
Biophys. J.
, vol.76
, pp. 1757-1769
-
-
Tieleman, D.P.1
Berendsen, H.J.C.2
Sansom, M.S.P.3
-
69
-
-
77954256616
-
G-membed: Efficient insertion of a membrane protein into an equilibrated lipid bilayer with minimal perturbation
-
M.G. Wolf, M. Hoefling, C. Aponte-Santamaría, H. Grubmüller, and G. Groenhof g-membed: efficient insertion of a membrane protein into an equilibrated lipid bilayer with minimal perturbation J. Comput. Chem. 31 2010 2169 2174
-
(2010)
J. Comput. Chem.
, vol.31
, pp. 2169-2174
-
-
Wolf, M.G.1
Hoefling, M.2
Aponte-Santamaría, C.3
Grubmüller, H.4
Groenhof, G.5
-
70
-
-
0036618993
-
Setting up and optimization of membrane protein simulations
-
J. Faraldo-Gómez, G. Smith, and M. Sansom Setting up and optimization of membrane protein simulations Eur. Biophys. J. 31 2002 217 227
-
(2002)
Eur. Biophys. J.
, vol.31
, pp. 217-227
-
-
Faraldo-Gómez, J.1
Smith, G.2
Sansom, M.3
-
71
-
-
79954466952
-
GRIFFIN: A versatile methodology for optimization of protein-lipid interfaces for membrane protein simulations
-
R. Staritzbichler, C. Anselmi, L.R. Forrest, and J.D. Faraldo-Gómez GRIFFIN: a versatile methodology for optimization of protein-lipid interfaces for membrane protein simulations J. Chem. Theory Comput. 7 2011 1167 1176
-
(2011)
J. Chem. Theory Comput.
, vol.7
, pp. 1167-1176
-
-
Staritzbichler, R.1
Anselmi, C.2
Forrest, L.R.3
Faraldo-Gómez, J.D.4
-
72
-
-
33947139278
-
Setting up and running molecular dynamics simulations of membrane proteins
-
C. Kandt, W.L. Ash, and D.P. Tieleman Setting up and running molecular dynamics simulations of membrane proteins Methods 41 2007 475 488
-
(2007)
Methods
, vol.41
, pp. 475-488
-
-
Kandt, C.1
Ash, W.L.2
Tieleman, D.P.3
-
73
-
-
2642533608
-
Lipid modulation of protein-induced membrane domains as a mechanism for controlling signal transduction
-
A. Hinderliter, R.L. Biltonen, and P.F.F. Almeida Lipid modulation of protein-induced membrane domains as a mechanism for controlling signal transduction Biochemistry 43 2004 7102 7110
-
(2004)
Biochemistry
, vol.43
, pp. 7102-7110
-
-
Hinderliter, A.1
Biltonen, R.L.2
Almeida, P.F.F.3
-
74
-
-
0021474573
-
Mattress model of lipid-protein interactions in membranes
-
O.G. Mouritsen, and M. Bloom Mattress model of lipid-protein interactions in membranes Biophys. J. 46 1984 141 153
-
(1984)
Biophys. J.
, vol.46
, pp. 141-153
-
-
Mouritsen, O.G.1
Bloom, M.2
-
75
-
-
0031740415
-
Hydrophobic mismatch between proteins and lipids in membranes
-
J.A. Killian Hydrophobic mismatch between proteins and lipids in membranes Biochim. Biophys. Acta 1376 1998 401 416
-
(1998)
Biochim. Biophys. Acta
, vol.1376
, pp. 401-416
-
-
Killian, J.A.1
-
76
-
-
33746647787
-
Peptides in lipid bilayers: The power of simple models
-
J.A. Killian, and T.K.M. Nyholm Peptides in lipid bilayers: the power of simple models Curr. Opin. Struct. Biol. 16 2006 473 479
-
(2006)
Curr. Opin. Struct. Biol.
, vol.16
, pp. 473-479
-
-
Killian, J.A.1
Nyholm, T.K.M.2
-
77
-
-
35548971929
-
Effect of sequence hydrophobicity and bilayer width upon the minimum length required for the formation of transmembrane helices in membranes
-
S.S. Krishnakumar, and E. London Effect of sequence hydrophobicity and bilayer width upon the minimum length required for the formation of transmembrane helices in membranes J. Mol. Biol. 374 2007 671 687
-
(2007)
J. Mol. Biol.
, vol.374
, pp. 671-687
-
-
Krishnakumar, S.S.1
London, E.2
-
78
-
-
67649396451
-
Free energies of molecular bound states in lipid bilayers: Lethal concentrations of antimicrobial peptides
-
H.W. Huang Free energies of molecular bound states in lipid bilayers: lethal concentrations of antimicrobial peptides Biophy. J. 96 2009 3263 3272
-
(2009)
Biophy. J.
, vol.96
, pp. 3263-3272
-
-
Huang, H.W.1
-
79
-
-
0033783447
-
31P solid-state NMR spectroscopy investigation
-
31P solid-state NMR spectroscopy investigation Biochemistry 39 2000 13,106 13,114
-
(2000)
Biochemistry
, vol.39
, pp. 13
-
-
Harzer, U.1
Bechinger, B.2
-
80
-
-
34447301253
-
New sequences, constituents and producers of peptaibiotics: An updated review
-
T. Degenkolb, J. Kirschbaum, and H. Brückner New sequences, constituents and producers of peptaibiotics: an updated review Chem. Biodivers. 4 2007 1052 1067
-
(2007)
Chem. Biodivers.
, vol.4
, pp. 1052-1067
-
-
Degenkolb, T.1
Kirschbaum, J.2
Brückner, H.3
-
81
-
-
0345169902
-
Differences in membrane pore formation by peptaibols
-
P.A. Grigoriev, B. Schlegel, M. Kronen, A. Berg, A. Härtl, and U. Gräfe Differences in membrane pore formation by peptaibols J. Pept. Sci. 9 2003 763 768
-
(2003)
J. Pept. Sci.
, vol.9
, pp. 763-768
-
-
Grigoriev, P.A.1
Schlegel, B.2
Kronen, M.3
Berg, A.4
Härtl, A.5
Gräfe, U.6
-
82
-
-
0032466175
-
Antiamoebin can function as a carrier or as a pore-forming peptaibol
-
H. Duclohier, C.F. Snook, and B.A. Wallace Antiamoebin can function as a carrier or as a pore-forming peptaibol Biochim. Biophys. Acta 1415 1998 255 260
-
(1998)
Biochim. Biophys. Acta
, vol.1415
, pp. 255-260
-
-
Duclohier, H.1
Snook, C.F.2
Wallace, B.A.3
-
83
-
-
0035822539
-
31P solid-state NMR investigations on the orientation of zervamicin II and alamethicin in phosphatidylcholine membranes
-
31P solid-state NMR investigations on the orientation of zervamicin II and alamethicin in phosphatidylcholine membranes Biochemistry 40 2001 9428 9437
-
(2001)
Biochemistry
, vol.40
, pp. 9428-9437
-
-
Bechinger, B.1
Skladnev, D.A.2
Ogrel, A.3
Li, X.4
Rogozhkina, E.V.5
Ovchinnikova, T.V.6
O'Neil, J.D.J.7
Raap, J.8
-
84
-
-
58849139281
-
31P solid-state NMR spectroscopy
-
31P solid-state NMR spectroscopy Biophys. J. 96 2009 86 100
-
(2009)
Biophys. J.
, vol.96
, pp. 86-100
-
-
Salnikov, E.S.1
Friedrich, H.2
Li, X.3
Bertani, P.4
Reissmann, S.5
Hertweck, C.6
O'Neil, J.D.J.7
Raap, J.8
Bechinger, B.9
-
85
-
-
23844467490
-
Interactions of membrane-active peptides with thick, neutral, nonzwitterionic bilayers
-
K. Vijayan, D.E. Discher, J. Lal, P. Janmey, and M. Goulian Interactions of membrane-active peptides with thick, neutral, nonzwitterionic bilayers J. Phys. Chem. B 109 2005 14,356 14,364
-
(2005)
J. Phys. Chem. B
, vol.109
, pp. 14
-
-
Vijayan, K.1
Discher, D.E.2
Lal, J.3
Janmey, P.4
Goulian, M.5
-
86
-
-
0034741459
-
Short-chain analogues of the lipopeptaibol antibiotic trichogin GA IV: Conformational analysis and membrane modifying properties
-
F. Formaggio, C. Peggion, M. Crisma, and C. Toniolo Short-chain analogues of the lipopeptaibol antibiotic trichogin GA IV: conformational analysis and membrane modifying properties J. Chem. Soc., Perkin Trans. 2 2001 1372 1377
-
(2001)
J. Chem. Soc., Perkin Trans.
, vol.2
, pp. 1372-1377
-
-
Formaggio, F.1
Peggion, C.2
Crisma, M.3
Toniolo, C.4
|