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Volumn 65, Issue 1, 2013, Pages 13-19

Computational Study of ADD1 Gene Polymorphism Associated with Hypertension

Author keywords

ADD1; Coiled region; Disordered; Hypertension; rs4961

Indexed keywords


EID: 84871527226     PISSN: 10859195     EISSN: None     Source Type: Journal    
DOI: 10.1007/s12013-012-9398-2     Document Type: Article
Times cited : (9)

References (46)
  • 1
    • 77958044899 scopus 로고    scopus 로고
    • Non-synonymous single-nucleotide polymorphisms associated with blood pressure and hypertension
    • Hong, K. W., Jin, H. S., Lim, J. E., et al. (2010). Non-synonymous single-nucleotide polymorphisms associated with blood pressure and hypertension. Journal of Human Hypertension, 24, 763-774.
    • (2010) Journal of Human Hypertension , vol.24 , pp. 763-774
    • Hong, K.W.1    Jin, H.S.2    Lim, J.E.3
  • 3
    • 33644795955 scopus 로고    scopus 로고
    • ANG II stimulates phospholipase D through PKCζ activation in VSMC: Implications in adhesion, spreading, and hypertrophy
    • Parmentier, J. H., Pavicevic, Z., & Malik, K. U. (2006). ANG II stimulates phospholipase D through PKCζ activation in VSMC: Implications in adhesion, spreading, and hypertrophy. American Journal of Physiology Heart and Circulatory Physiology, 290, 46-54.
    • (2006) American Journal of Physiology Heart and Circulatory Physiology , vol.290 , pp. 46-54
    • Parmentier, J.H.1    Pavicevic, Z.2    Malik, K.U.3
  • 4
    • 0035993007 scopus 로고    scopus 로고
    • A1166C polymorphism of the angiotensin ii type 1 receptor gene and essential hypertension in Han, Tibetan and Yi populations
    • Liu, Y., Zhuoma, C., Shan, G., et al. (2002). A1166C polymorphism of the angiotensin ii type 1 receptor gene and essential hypertension in Han, Tibetan and Yi populations. Hypertension Research, 25, 515-521.
    • (2002) Hypertension Research , vol.25 , pp. 515-521
    • Liu, Y.1    Zhuoma, C.2    Shan, G.3
  • 5
    • 0035093022 scopus 로고    scopus 로고
    • Angiotensin II signaling to phospholipase D in renal microvascular smooth muscle cells in SHR
    • Andresen, B. T., Jackson, E. K., & Romero, G. G. (2001). Angiotensin II signaling to phospholipase D in renal microvascular smooth muscle cells in SHR. Hypertension, 37, 635-639.
    • (2001) Hypertension , vol.37 , pp. 635-639
    • Andresen, B.T.1    Jackson, E.K.2    Romero, G.G.3
  • 6
    • 84871493713 scopus 로고    scopus 로고
    • Analysis of non-synonymous single-nucleotide polymorphisms and population variability of PLD2 gene associated with hypertension
    • (in press)
    • Kundu, A., Ramakrishnan, P., Rajendran, A. et al. (2011). Analysis of non-synonymous single-nucleotide polymorphisms and population variability of PLD2 gene associated with hypertension. International Journal of Bioinformatics Research and Applications (in press).
    • (2011) International Journal of Bioinformatics Research and Applications
    • Kundu, A.1    Ramakrishnan, P.2    Rajendran, A.3
  • 7
    • 0033063295 scopus 로고    scopus 로고
    • Adducin polymorphism affects renal proximal tubule reabsorption in hypertension
    • Manunta, P., Burnier, M., Amico, M. D., et al. (1999). Adducin polymorphism affects renal proximal tubule reabsorption in hypertension. Hypertension, 33, 694-697.
    • (1999) Hypertension , vol.33 , pp. 694-697
    • Manunta, P.1    Burnier, M.2    Amico, M.D.3
  • 9
    • 0034897607 scopus 로고    scopus 로고
    • Effects of three candidate genes on prevalence and incidence of hypertension in a Caucasian population
    • Staessena, J. A., Wanga, J. G., Brand, E., et al. (2001). Effects of three candidate genes on prevalence and incidence of hypertension in a Caucasian population. Journal of Hypertension, 19, 1349-1358.
    • (2001) Journal of Hypertension , vol.19 , pp. 1349-1358
    • Staessena, J.A.1    Wanga, J.G.2    Brand, E.3
  • 10
    • 0030898258 scopus 로고    scopus 로고
    • Polymorphisms of alpha-adducin and salt sensitivity in patients with essential hypertentions
    • Cusi, D., Barlassina, C., Azzani, T., et al. (1997). Polymorphisms of alpha-adducin and salt sensitivity in patients with essential hypertentions. Lancet, 349, 1353-1357.
    • (1997) Lancet , vol.349 , pp. 1353-1357
    • Cusi, D.1    Barlassina, C.2    Azzani, T.3
  • 11
    • 0029022939 scopus 로고
    • Adducin: A physical model with implications for function in assembly of spectrin-actin complexes
    • Hughes, C. A., & Bennett, V. (1995). Adducin: A physical model with implications for function in assembly of spectrin-actin complexes. Journal of Biological Chemistry, 270, 18990-18996.
    • (1995) Journal of Biological Chemistry , vol.270 , pp. 18990-18996
    • Hughes, C.A.1    Bennett, V.2
  • 12
    • 0029841346 scopus 로고    scopus 로고
    • Definition of the calmodulin-binding domain and sites of phosphorylation by protein kinases A and C
    • Matsuoka, Y., Hughes, C. A., & Bennett, V. (1996). Definition of the calmodulin-binding domain and sites of phosphorylation by protein kinases A and C. Journal of Biological Chemistry, 271, 25157-25166.
    • (1996) Journal of Biological Chemistry , vol.271 , pp. 25157-25166
    • Matsuoka, Y.1    Hughes, C.A.2    Bennett, V.3
  • 13
    • 0030005249 scopus 로고    scopus 로고
    • A new function for adducin: calcium/calmodulin-regulated capping of the barbed ends of actin filaments
    • Kuhlman, P. A., Hughes, C. A., Bennet, V., et al. (1996). A new function for adducin: calcium/calmodulin-regulated capping of the barbed ends of actin filaments. Journal of Biological Chemistry, 271, 7986-7991.
    • (1996) Journal of Biological Chemistry , vol.271 , pp. 7986-7991
    • Kuhlman, P.A.1    Hughes, C.A.2    Bennet, V.3
  • 14
    • 0029102078 scopus 로고
    • Role of the actin cytoskeleton on epithelial sodium channel regulation
    • Cantiello, H. F. (1995). Role of the actin cytoskeleton on epithelial sodium channel regulation. Kidney International, 48, 970-984.
    • (1995) Kidney International , vol.48 , pp. 970-984
    • Cantiello, H.F.1
  • 15
    • 0030003079 scopus 로고    scopus 로고
    • Regulation of epithelial sodium channels by short actin filaments
    • Berdiev, B. K., Prat, A. G., Cantiello, H. F., et al. (1996). Regulation of epithelial sodium channels by short actin filaments. Journal of Biological Chemistry, 271, 17704-17710.
    • (1996) Journal of Biological Chemistry , vol.271 , pp. 17704-17710
    • Berdiev, B.K.1    Prat, A.G.2    Cantiello, H.F.3
  • 16
    • 0028670807 scopus 로고
    • Role of F-actin in the activation of Na1-N(1)-Cl cotransport by forskolin and vasopressin in mouse kidney cultured thick ascending limb cells
    • Wu, M. S., Bens, M., Cluzeaud, F., et al. (1994). Role of F-actin in the activation of Na1-N(1)-Cl cotransport by forskolin and vasopressin in mouse kidney cultured thick ascending limb cells. Journal of Membrane Biology, 142, 323-336.
    • (1994) Journal of Membrane Biology , vol.142 , pp. 323-336
    • Wu, M.S.1    Bens, M.2    Cluzeaud, F.3
  • 17
    • 38549092091 scopus 로고    scopus 로고
    • Database resources of the National Center for Biotechnology Information
    • Wheeler, D. L., Barrett, T., Benson, D. A., et al. (2008). Database resources of the National Center for Biotechnology Information. Nucleic Acids Research, 36, 13-21.
    • (2008) Nucleic Acids Research , vol.36 , pp. 13-21
    • Wheeler, D.L.1    Barrett, T.2    Benson, D.A.3
  • 18
    • 64549139680 scopus 로고    scopus 로고
    • An integrative scoring system for ranking SNPs by their potential deleterious effects
    • Lee, P. H., & Shatkay, H. (2009). An integrative scoring system for ranking SNPs by their potential deleterious effects. Bioinformatics, 25, 1048-1055.
    • (2009) Bioinformatics , vol.25 , pp. 1048-1055
    • Lee, P.H.1    Shatkay, H.2
  • 20
    • 0035026704 scopus 로고    scopus 로고
    • Predicting deleterious amino acid substitutions
    • Ng, P., & Henikoff, S. (2001). Predicting deleterious amino acid substitutions. Genome Research, 11, 863-874.
    • (2001) Genome Research , vol.11 , pp. 863-874
    • Ng, P.1    Henikoff, S.2
  • 21
    • 39249084312 scopus 로고    scopus 로고
    • Correlating observed odds ratios from lung cancer case-control studies to SNP functional scores predicted by bioinformatic tools
    • Zhu, Y., Hoffman, A., Wu, X., et al. (2008). Correlating observed odds ratios from lung cancer case-control studies to SNP functional scores predicted by bioinformatic tools. Mutation Research, 639, 80-88.
    • (2008) Mutation Research , vol.639 , pp. 80-88
    • Zhu, Y.1    Hoffman, A.2    Wu, X.3
  • 22
    • 33748672451 scopus 로고    scopus 로고
    • SNPeffect v2.0: A new step in investigating the molecular phenotypic effects of human non-synonymous SNPs
    • Reumers, J., Maurer-Stroh, S., Schymkowitz, J., et al. (2006). SNPeffect v2. 0: A new step in investigating the molecular phenotypic effects of human non-synonymous SNPs. Bioinformatics, 22, 2183-2185.
    • (2006) Bioinformatics , vol.22 , pp. 2183-2185
    • Reumers, J.1    Maurer-Stroh, S.2    Schymkowitz, J.3
  • 23
    • 33645764714 scopus 로고    scopus 로고
    • SNPs3D: Candidate gene and SNP selection for association studies
    • Yue, P., Melamud, E., Moult, J., et al. (2006). SNPs3D: Candidate gene and SNP selection for association studies. BMC Bioinformatics, 7, 166-181.
    • (2006) BMC Bioinformatics , vol.7 , pp. 166-181
    • Yue, P.1    Melamud, E.2    Moult, J.3
  • 24
    • 0042242582 scopus 로고    scopus 로고
    • ESEfinder: A web resource to identify exonic splicing enhancers
    • Cartegni, L., Wang, J., Zhu, Z., et al. (2003). ESEfinder: A web resource to identify exonic splicing enhancers. Nucleic Acids Research, 31, 3568-3571.
    • (2003) Nucleic Acids Research , vol.31 , pp. 3568-3571
    • Cartegni, L.1    Wang, J.2    Zhu, Z.3
  • 25
    • 3242888697 scopus 로고    scopus 로고
    • RESCUE-ESE identifies candidate exonic splicing enhancers in vertebrate exons
    • Fairbrother, W. G., Yeo, G. W., Yeh, R., et al. (2004). RESCUE-ESE identifies candidate exonic splicing enhancers in vertebrate exons. Nucleic Acids Research, 32, 187-190.
    • (2004) Nucleic Acids Research , vol.32 , pp. 187-190
    • Fairbrother, W.G.1    Yeo, G.W.2    Yeh, R.3
  • 26
    • 0037047644 scopus 로고    scopus 로고
    • Predictive identification of exonic splicing enhancers in human genes
    • Fairbrother, W. G., Yeh, R. F., Sharp, P. A., et al. (2002). Predictive identification of exonic splicing enhancers in human genes. Science, 297, 1007-1013.
    • (2002) Science , vol.297 , pp. 1007-1013
    • Fairbrother, W.G.1    Yeh, R.F.2    Sharp, P.A.3
  • 27
    • 23344437521 scopus 로고    scopus 로고
    • Exon inclusion is dependent on predictable exonic splicing enhancers
    • Zhang, X. H. F., Kangsamaksin, T., Chao, M. S. P., et al. (2005). Exon inclusion is dependent on predictable exonic splicing enhancers. Molecular and Cellular Biology, 25, 7323-7332.
    • (2005) Molecular and Cellular Biology , vol.25 , pp. 7323-7332
    • Zhang, X.H.F.1    Kangsamaksin, T.2    Chao, M.S.P.3
  • 28
    • 33846078622 scopus 로고    scopus 로고
    • The UCSC genome browser database: Update 2007
    • Kuhn, R., Karolchik, D., Zweig, A. S., et al. (2007). The UCSC genome browser database: Update 2007. Nucleic Acids Research, 35, 668-673.
    • (2007) Nucleic Acids Research , vol.35 , pp. 668-673
    • Kuhn, R.1    Karolchik, D.2    Zweig, A.S.3
  • 29
    • 55349100242 scopus 로고    scopus 로고
    • SPSmart: Adapting population based SNP genotype databases for fast and comprehensive web access
    • Amigo, J., Salas, A., Phillips, C., et al. (2008). SPSmart: Adapting population based SNP genotype databases for fast and comprehensive web access. BMC Bioinformatics, 9, 428-433.
    • (2008) BMC Bioinformatics , vol.9 , pp. 428-433
    • Amigo, J.1    Salas, A.2    Phillips, C.3
  • 30
    • 0347383758 scopus 로고    scopus 로고
    • Modeller: Generation and refinement of homology-based protein structure models
    • Fisher, A., & Sali, A. (2003). Modeller: Generation and refinement of homology-based protein structure models. Methods in Enzymology, 374, 461-491.
    • (2003) Methods in Enzymology , vol.374 , pp. 461-491
    • Fisher, A.1    Sali, A.2
  • 31
    • 0242458482 scopus 로고    scopus 로고
    • Protein disorder prediction: Implications for structural proteomics
    • Linding, R., Jensen, L. J., Diella, F., et al. (2003). Protein disorder prediction: Implications for structural proteomics. Structure, 11, 1453-1459.
    • (2003) Structure , vol.11 , pp. 1453-1459
    • Linding, R.1    Jensen, L.J.2    Diella, F.3
  • 32
    • 33749254585 scopus 로고    scopus 로고
    • Applications of computational algorithm tools to identify functional SNPs in cytokine genes
    • Shen, J., Deininger, P. L., & Zhao, H. (2006). Applications of computational algorithm tools to identify functional SNPs in cytokine genes. Cytokine, 35, 62-66.
    • (2006) Cytokine , vol.35 , pp. 62-66
    • Shen, J.1    Deininger, P.L.2    Zhao, H.3
  • 33
    • 33747891736 scopus 로고    scopus 로고
    • An increased specificity score matrix for the prediction of SF2/ASF-specific exonic splicing enhancers
    • Smith, P. J., Zhang, C., Wang, J., et al. (2006). An increased specificity score matrix for the prediction of SF2/ASF-specific exonic splicing enhancers. Human Molecular Genetics, 15, 2490-2508.
    • (2006) Human Molecular Genetics , vol.15 , pp. 2490-2508
    • Smith, P.J.1    Zhang, C.2    Wang, J.3
  • 34
    • 20844461337 scopus 로고    scopus 로고
    • LS-SNP: Large-scale annotation of coding non-synonymous SNPs based on multiple information sources
    • Karchin, R., Diekhans, M., Kelly, L., et al. (2005). LS-SNP: Large-scale annotation of coding non-synonymous SNPs based on multiple information sources. Bioinformatics, 21, 2814-2820.
    • (2005) Bioinformatics , vol.21 , pp. 2814-2820
    • Karchin, R.1    Diekhans, M.2    Kelly, L.3
  • 35
    • 69549130702 scopus 로고    scopus 로고
    • A survey of ABCA1 sequence variation confirms association with dementia
    • Reynolds, C. A., Hong, M. G., Eriksson, U. K., et al. (2009). A survey of ABCA1 sequence variation confirms association with dementia. Human Mutation, 30, 1348-1354.
    • (2009) Human Mutation , vol.30 , pp. 1348-1354
    • Reynolds, C.A.1    Hong, M.G.2    Eriksson, U.K.3
  • 36
    • 70249139920 scopus 로고    scopus 로고
    • Mining potential functionally significant polymorphisms at the ATP-binding-cassette transporter genes
    • Wang, Z., Wang, J., Chong, S. S., et al. (2009). Mining potential functionally significant polymorphisms at the ATP-binding-cassette transporter genes. Current Pharmacogenomics and Personalized Medicine, 7, 40-58.
    • (2009) Current Pharmacogenomics and Personalized Medicine , vol.7 , pp. 40-58
    • Wang, Z.1    Wang, J.2    Chong, S.S.3
  • 37
    • 4344671923 scopus 로고    scopus 로고
    • Variation of gene-based SNPs and linkage disequilibrium patterns in the human genome
    • Tsunoda, T., Lathrop, G. M., Sekine, A., et al. (2004). Variation of gene-based SNPs and linkage disequilibrium patterns in the human genome. Human Molecular Genetics, 13, 1623-1632.
    • (2004) Human Molecular Genetics , vol.13 , pp. 1623-1632
    • Tsunoda, T.1    Lathrop, G.M.2    Sekine, A.3
  • 38
    • 0037270931 scopus 로고    scopus 로고
    • Structural bioinformatics
    • P. E. Bourne and H. Weissig (Eds.), Hoboken, NJ: Wiley
    • Scheeff, E. D., & Fink, J. L. (2003). Structural bioinformatics. In P. E. Bourne & H. Weissig (Eds.), Fundamentals of protein structure (pp. 15-39). Hoboken, NJ: Wiley.
    • (2003) Fundamentals of Protein Structure , pp. 15-39
    • Scheeff, E.D.1    Fink, J.L.2
  • 39
    • 79953894417 scopus 로고    scopus 로고
    • Computational analysis of modular protein architectures
    • G. Cesareni, M. Gimona, and M. Sudol (Eds.), Weinheim: Wiley-VCH
    • Linding, R., Letunic, I., Gibson, T. J., & Bork, P. (2005). Computational analysis of modular protein architectures. In G. Cesareni, M. Gimona, & M. Sudol (Eds.), Modular protein domains (pp. 439-476). Weinheim: Wiley-VCH.
    • (2005) Modular Protein Domains , pp. 439-476
    • Linding, R.1    Letunic, I.2    Gibson, T.J.3    Bork, P.4
  • 41
    • 77953582629 scopus 로고    scopus 로고
    • Population based allele frequencies of disease associated polymorphisms in the personalized medicine research project
    • Cross, D. S., Ivacic, L. C., Stefanski, E. L., et al. (2010). Population based allele frequencies of disease associated polymorphisms in the personalized medicine research project. BMC Genetics, 11, 51-66.
    • (2010) BMC Genetics , vol.11 , pp. 51-66
    • Cross, D.S.1    Ivacic, L.C.2    Stefanski, E.L.3
  • 42
    • 0035993007 scopus 로고    scopus 로고
    • A1166C polymorphism of the angiotensin II type 1 receptor gene and essential hypertension in Han, Tibetan and Yi populations
    • Liu, Y., Zhuoma, C., Shan, G., et al. (2002). A1166C polymorphism of the angiotensin II type 1 receptor gene and essential hypertension in Han, Tibetan and Yi populations. Hypertension Research, 25, 515-521.
    • (2002) Hypertension Research , vol.25 , pp. 515-521
    • Liu, Y.1    Zhuoma, C.2    Shan, G.3
  • 43
    • 0042062358 scopus 로고    scopus 로고
    • Salt sensitivity of Japanese from the viewpoint of gene polymorphism
    • Katsua, T., Ishikawa, K., Sugimoto, K., et al. (2003). Salt sensitivity of Japanese from the viewpoint of gene polymorphism. Hypertension Research, 26, 521-525.
    • (2003) Hypertension Research , vol.26 , pp. 521-525
    • Katsua, T.1    Ishikawa, K.2    Sugimoto, K.3
  • 44
    • 25144523127 scopus 로고    scopus 로고
    • Loss of protein structure stability as a major causative factor in monogenic disease
    • Yue, P., Li, Z., & Moult, J. (2005). Loss of protein structure stability as a major causative factor in monogenic disease. Journal of Molecular Biology, 353, 459-473.
    • (2005) Journal of Molecular Biology , vol.353 , pp. 459-473
    • Yue, P.1    Li, Z.2    Moult, J.3
  • 45
    • 0033927991 scopus 로고    scopus 로고
    • Association and linkage analysis of á-adducin polymorphism: Is the glass half full or half empty?
    • Bianchi, G., & Cusi, D. (2000). Association and linkage analysis of á-adducin polymorphism: Is the glass half full or half empty? American Journal of Hypertension, 13, 739-743.
    • (2000) American Journal of Hypertension , vol.13 , pp. 739-743
    • Bianchi, G.1    Cusi, D.2
  • 46
    • 0008190467 scopus 로고    scopus 로고
    • Synergistic effect of α-adducin and ACE genes causes blood hypertension and three candidate genes
    • Barlassina, C., Schork, N. J., Manuta, P., et al. (2000). Synergistic effect of α-adducin and ACE genes causes blood hypertension and three candidate genes. Kidney International, 57, 1083-1090.
    • (2000) Kidney International , vol.57 , pp. 1083-1090
    • Barlassina, C.1    Schork, N.J.2    Manuta, P.3


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