SPSmart: Adapting population based SNP genotype databases for fast and comprehensive web access

BMC Bioinformatics

Volumn 9, Issue , 2008, Pages

  Amigo, Jorge ^a   Salas, Antonio ^a   Phillips, Christopher ^a   Carracedo, Ángel ^a  

^a UNIVERSITY OF SANTIAGO DE COMPOSTELA   (Spain)

Author keywords

[No Author keywords available]

Indexed keywords

GRAPHICAL SUMMARIES; HUMAN VARIABILITY; POPULATION GENETICS; POPULATION STUDIES; POPULATION VARIABILITY; QUERYING DATABASE; RELATIONAL DATABASE; SINGLE NUCLEOTIDE POLYMORPHISMS;

DATABASE SYSTEMS; GENES; QUERY PROCESSING;

POPULATION STATISTICS;

ACCESS TO INFORMATION; ARTICLE; COMPUTER PROGRAM; GENE FREQUENCY; GENETIC DATABASE; GENOTYPE; HETEROZYGOSITY; HUMAN; INFORMATION PROCESSING; INFORMATION STORAGE; INTERNET; MATHEMATICAL COMPUTING; ONLINE SYSTEM; POPULATION GENETICS; SINGLE NUCLEOTIDE POLYMORPHISM; WEB BROWSER; COMPUTER INTERFACE; DNA SEQUENCE; GENETICS; HUMAN GENOME; METHODOLOGY;

GENOME, HUMAN; HUMANS; INTERNET; POLYMORPHISM, SINGLE NUCLEOTIDE; SEQUENCE ANALYSIS, DNA; USER-COMPUTER INTERFACE;

EID: 55349100242     PISSN: None     EISSN: 14712105     Source Type: Journal    
DOI: 10.1186/1471-2105-9-428     Document Type: Article

References (10)

1. The International HapMap Consortium A haplotype map of the human genome Nature 2005, 437(7063):1299-1320. 1880871 16255080 10.1038/nature04226
2. Thorisson GA Smith AV Krishnan L Stein LD The International HapMap Project Web site Genome Res 2005, 15(11):1592-1593. 1310647 16251469 10.1101/gr.4413105
3. Peacock E Whiteley P Perlegen sciences, inc Pharmacogenomics 2005, 6(4):439-442. 10.1517/14622416.6.4.439 16004563
4. Cann HM de Toma C Cazes L Legrand MF Morel V Piouffre L Bodmer J Bodmer WF Bonne-Tamir B Cambon-Thomsen A A human genome diversity cell line panel Science 2002, 296(5566):261-262. 10.1126/science.296.5566.261b 11954565
5. Rosenberg NA Standardized subsets of the HGDP-CEPH Human Genome Diversity Cell Line Panel, accounting for atypical and duplicated samples and pairs of close relatives Ann Hum Genet 2006, 70(Pt 6):841-847. 10.1111/j.1469-1809.2006.00285.x 17044859
6. Li JZ Absher DM Tang H Southwick AM Casto AM Ramachandran S Cann HM Barsh GS Feldman M Cavalli-Sforza LL Worldwide human relationships inferred from genome-wide patterns of variation Science 2008, 319(5866):1100-1104. 10.1126/science.1153717 18292342
7. Gillespie JH Population genetics: A concise guide Baltimore, Md: The Johns Hopkins University Press 1998
8. Hartl DL Clark AG Principles of population genetics Sunderland, MA: Sinauer Associates 3 1997
9. Long JC The allelic correlation structure of Gainj- and Kalam-speaking people. I. The estimation and interpretation of Wright's F-statistics Genetics 1986, 112(3):629-647. 1202767 3957006
10. Rosenberg NA Li LM Ward R Pritchard JK Informativeness of genetic markers for inference of ancestry Am J Hum Genet 2003, 73(6):1402-1422. 1180403 14631557 10.1086/380416