메뉴 건너뛰기




Volumn 1020, Issue , 2004, Pages 101-109

Bioinformatics tools for single nucleotide polymorphism discovery and analysis

Author keywords

Bioinformatics; Single nucleotide polymorphisms; SNPs

Indexed keywords

ACCESS TO INFORMATION; BIOINFORMATICS; CONFERENCE PAPER; GENE EXPRESSION; GENE MAPPING; HUMAN; INFORMATION PROCESSING; INFORMATION RETRIEVAL; INFORMATION SYSTEM; INTERNET; MEDICAL INFORMATION; SINGLE NUCLEOTIDE POLYMORPHISM;

EID: 2942604504     PISSN: 00778923     EISSN: None     Source Type: Book Series    
DOI: 10.1196/annals.1310.011     Document Type: Conference Paper
Times cited : (32)

References (19)
  • 1
    • 0035501076 scopus 로고    scopus 로고
    • In silico analysis of cancer through the Cancer Genome Anatomy Project
    • STRAUSBERG, R.L., S.F. GREENHUT, L.H. GROUSE et al. 2001. In silico analysis of cancer through the Cancer Genome Anatomy Project. Trends Cell Biol. 11: S66-S71.
    • (2001) Trends Cell Biol. , vol.11
    • Strausberg, R.L.1    Greenhut, S.F.2    Grouse, L.H.3
  • 2
    • 0037373275 scopus 로고    scopus 로고
    • Discovering genotypes underlying human phenotypes: Past successes for Mendelian disease, future approaches for complex disease
    • BOTSTEIN, D. & N. RISCH. 2003. Discovering genotypes underlying human phenotypes: past successes for Mendelian disease, future approaches for complex disease. Nat. Genet. 33: 228-237.
    • (2003) Nat. Genet. , vol.33 , pp. 228-237
    • Botstein, D.1    Risch, N.2
  • 3
    • 0037370629 scopus 로고    scopus 로고
    • Using haplotype blocks to map human complex trait loci
    • CARDON, L.R. & G.R. ABECASIS. 2003. Using haplotype blocks to map human complex trait loci. Trends Genet. 19: 135-140.
    • (2003) Trends Genet. , vol.19 , pp. 135-140
    • Cardon, L.R.1    Abecasis, G.R.2
  • 4
    • 0033018816 scopus 로고    scopus 로고
    • Reliable identification of large numbers of candidate SNPs from public EST data
    • BUETOW, K.H., M.N. EDMONSON & A.B. CASSIDY. 1999. Reliable identification of large numbers of candidate SNPs from public EST data. Nat. Genet. 21: 323-325.
    • (1999) Nat. Genet. , vol.21 , pp. 323-325
    • Buetow, K.H.1    Edmonson, M.N.2    Cassidy, A.B.3
  • 5
  • 6
    • 0034727107 scopus 로고    scopus 로고
    • An SNP map of the human genome generated by reduced representation shotgun sequencing
    • ALTSHULER, D., V.J. POLLARA, C.R. COWLES et al. 2000. An SNP map of the human genome generated by reduced representation shotgun sequencing. Nature 407: 513-516.
    • (2000) Nature , vol.407 , pp. 513-516
    • Altshuler, D.1    Pollara, V.J.2    Cowles, C.R.3
  • 7
    • 0037250403 scopus 로고    scopus 로고
    • The SNP Consortium Website: Past, present, and future
    • THORISSON, G.A. & L.D. STEIN. 2003. The SNP Consortium Website: past, present, and future. Nucleic Acids Res. 31: 124-127.
    • (2003) Nucleic Acids Res. , vol.31 , pp. 124-127
    • Thorisson, G.A.1    Stein, L.D.2
  • 8
    • 0031955518 scopus 로고    scopus 로고
    • Base-calling of automated sequencer traces using Phred: I. Accuracy assessment
    • EWING, B., L. HILLIER, M.C. WENDL & P. GREEN. 1998. Base-calling of automated sequencer traces using Phred: I. Accuracy assessment. Genome Res. 8: 175-185.
    • (1998) Genome Res. , vol.8 , pp. 175-185
    • Ewing, B.1    Hillier, L.2    Wendl, M.C.3    Green, P.4
  • 9
    • 0031978181 scopus 로고    scopus 로고
    • Base-calling of automated sequencer traces using Phred: II. Error probabilities
    • EWING, B. & P. GREEN. 1998. Base-calling of automated sequencer traces using Phred: II. Error probabilities. Genome Res. 8: 186-194.
    • (1998) Genome Res. , vol.8 , pp. 186-194
    • Ewing, B.1    Green, P.2
  • 10
    • 0035895258 scopus 로고    scopus 로고
    • High-throughput development and characterization of a genomewide collection of gene-based single nucleotide polymorphism markers by chip-based matrix-assisted laser desorption/ionization time-of-flight mass spectrometry
    • BUETOW, K.H., M. EDMONSON, R. MACDONALD et al. 2001. High-throughput development and characterization of a genomewide collection of gene-based single nucleotide polymorphism markers by chip-based matrix-assisted laser desorption/ionization time-of-flight mass spectrometry. Proc. Natl. Acad. Sci. USA 98: 581-584.
    • (2001) Proc. Natl. Acad. Sci. USA , vol.98 , pp. 581-584
    • Buetow, K.H.1    Edmonson, M.2    MacDonald, R.3
  • 11
    • 0033824488 scopus 로고    scopus 로고
    • Expression-based genetic/physical maps of single-nucleotide polymorphisms identified by the Cancer Genome Anatomy Project
    • CLIFFORD, R., M. EDMONSON, Y. HU et al. 2000. Expression-based genetic/physical maps of single-nucleotide polymorphisms identified by the Cancer Genome Anatomy Project. Genome Res. 10: 1259-1265.
    • (2000) Genome Res. , vol.10 , pp. 1259-1265
    • Clifford, R.1    Edmonson, M.2    Hu, Y.3
  • 12
    • 85047696048 scopus 로고
    • Construction and comparison of chromosome 21 radiation hybrid and linkage maps using CRI-MAP
    • GREEN, P. 1992. Construction and comparison of chromosome 21 radiation hybrid and linkage maps using CRI-MAP. Cytogenet. Cell Genet. 59: 122-124
    • (1992) Cytogenet. Cell Genet. , vol.59 , pp. 122-124
    • Green, P.1
  • 13
    • 2942592635 scopus 로고    scopus 로고
    • Large-scale analysis of non-synonymous coding region single nucleotide polymorphisms
    • In press
    • CLIFFORD, R., M. EDMONSON, C. NGUYEN & K.H. BUETOW. 2003. Large-scale analysis of non-synonymous coding region single nucleotide polymorphisms. Bioinformatics. In press.
    • (2003) Bioinformatics
    • Clifford, R.1    Edmonson, M.2    Nguyen, C.3    Buetow, K.H.4
  • 14
    • 0032876978 scopus 로고    scopus 로고
    • dbSNP - Database for single nucleotide polymorphisms and other classes of minor genetic variation
    • SHERRY, S.T., M. WARD & K. SIROTKIN. 1999. dbSNP - database for single nucleotide polymorphisms and other classes of minor genetic variation. Genome Res. 9: 677-679.
    • (1999) Genome Res. , vol.9 , pp. 677-679
    • Sherry, S.T.1    Ward, M.2    Sirotkin, K.3
  • 15
    • 0035162594 scopus 로고    scopus 로고
    • RefSeq and LocusLink: NCBI gene-centered resources
    • PRUITT, K.D. & D.R. MAGLOTT. 2001. RefSeq and LocusLink: NCBI gene-centered resources. Nucleic Acids Res. 29: 137-140.
    • (2001) Nucleic Acids Res. , vol.29 , pp. 137-140
    • Pruitt, K.D.1    Maglott, D.R.2
  • 17
    • 0032952229 scopus 로고    scopus 로고
    • Pfam 3.1: 1313 multiple alignments and profile HMMs match the majority of proteins
    • BATEMAN, A., E. BIRNEY, R. DURBIN et al. 1999. Pfam 3.1: 1313 multiple alignments and profile HMMs match the majority of proteins. Nucleic Acids Res. 27: 260-262.
    • (1999) Nucleic Acids Res. , vol.27 , pp. 260-262
    • Bateman, A.1    Birney, E.2    Durbin, R.3
  • 19
    • 0031743421 scopus 로고    scopus 로고
    • Profile hidden Markov models
    • EDDY, S.R. 1998. Profile hidden Markov models. Bioinformatics 14: 755-763.
    • (1998) Bioinformatics , vol.14 , pp. 755-763
    • Eddy, S.R.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.