-
1
-
-
33745387612
-
Overview of retinoid metabolism and function
-
DOI 10.1002/neu.20242
-
Blomhoff, R., and Blomhoff, H. K. (2006) Overview of retinoid metabolism and function. J. Neurobiol. 66, 606-630 (Pubitemid 43941649)
-
(2006)
Journal of Neurobiology
, vol.66
, Issue.7
, pp. 606-630
-
-
Blomhoff, R.1
Blomhoff, H.K.2
-
2
-
-
33644862344
-
Retinoic acid is required early during adult neurogenesis in the dentate gyrus
-
DOI 10.1073/pnas.0511294103
-
Jacobs, S., Lie, D. C., DeCicco, K. L., Shi, Y., DeLuca, L. M., Gage, F. H., and Evans, R. M. (2006) Retinoic acid is required early during adult neurogenesis in the dentate gyrus. Proc. Natl. Acad. Sci. U.S.A. 103, 3902-3907 (Pubitemid 43376653)
-
(2006)
Proceedings of the National Academy of Sciences of the United States of America
, vol.103
, Issue.10
, pp. 3902-3907
-
-
Jacobs, S.1
Lie, D.C.2
DeCicco, K.L.3
Shi, Y.4
DeLuca, L.M.5
Gage, F.H.6
Evans, R.M.7
-
3
-
-
74949100673
-
All-trans retinoic acid lowers serum retinol-binding protein 4 concentrations and increases insulin sensitivity in diabetic mice
-
Manolescu, D. C., Sima, A., and Bhat, P. V. (2010) All-trans retinoic acid lowers serum retinol-binding protein 4 concentrations and increases insulin sensitivity in diabetic mice. J. Nutr. 140, 311-316
-
(2010)
J. Nutr.
, vol.140
, pp. 311-316
-
-
Manolescu, D.C.1
Sima, A.2
Bhat, P.V.3
-
4
-
-
34848834842
-
RAR and RXR modulation in cancer and metabolic disease
-
DOI 10.1038/nrd2397, PII NRD2397
-
Altucci, L., Leibowitz, M. D., Ogilvie, K. M., de Lera, A. R., and Gronemeyer, H. (2007) RAR and RXR modulation in cancer and metabolic disease. Nat. Rev. Drug. Discov. 6, 793-810 (Pubitemid 47504871)
-
(2007)
Nature Reviews Drug Discovery
, vol.6
, Issue.10
, pp. 793-810
-
-
Altucci, L.1
Leibowitz, M.D.2
Ogilvie, K.M.3
De Lera, A.R.4
Gronemeyer, H.5
-
5
-
-
0034629096
-
4-Hydroxyretinoic acid, a novel substrate for human liver microsomal UDP-glucuronosyltransferase(s) and recombinant UGT2B7
-
DOI 10.1074/jbc.275.10.6908
-
Samokyszyn, V. M., Gall, W. E., Zawada, G., Freyaldenhoven, M. A., Chen, G., Mackenzie, P. I., Tephly, T. R., and Radominska-Pandya, A. (2000) 4-Hydroxyretinoic acid, a novel substrate for human liver microsomal UDP-glucuronosyltransferase(s) and recombinant UGT2B7. J. Biol. Chem. 275, 6908-6914 (Pubitemid 30146232)
-
(2000)
Journal of Biological Chemistry
, vol.275
, Issue.10
, pp. 6908-6914
-
-
Samokyszyn, V.M.1
Gall, W.E.2
Zawada, G.3
Freyaldenhoven, M.A.4
Chen, G.5
Mackenzie, P.I.6
Tephly, T.R.7
Radominska-Pandya, A.8
-
6
-
-
0033213785
-
Participation of CYP2C8 in retinoic acid 4-hydroxylation in human hepatic microsomes
-
DOI 10.1016/S0006-2952(99)00192-6, PII S0006295299001926
-
Nadin, L., and Murray, M. (1999) Participation of CYP2C8 in retinoic acid 4-hydroxylation in human hepatic microsomes. Biochem. Pharmacol. 58, 1201-1208 (Pubitemid 29381521)
-
(1999)
Biochemical Pharmacology
, vol.58
, Issue.7
, pp. 1201-1208
-
-
Nadin, L.1
Murray, M.2
-
7
-
-
0034664168
-
Identification of human cytochrome P450 isoforms that contribute to all-trans-retinoic acid 4-hydroxylation
-
DOI 10.1016/S0006-2952(00)00356-7, PII S0006295200003567
-
McSorley, L. C., and Daly, A. K. (2000) Identification of human cytochrome P450 isoforms that contribute to all-trans-retinoic acid 4-hydroxylation. Biochem. Pharmacol. 60, 517-526 (Pubitemid 30389618)
-
(2000)
Biochemical Pharmacology
, vol.60
, Issue.4
, pp. 517-526
-
-
McSorley, L.C.1
Daly, A.K.2
-
8
-
-
0033674630
-
Identification of human cytochrome P450s involved in the formation of all-trans-retinoic acid principal metabolites
-
Marill, J., Cresteil, T., Lanotte, M., and Chabot, G. G. (2000) Identification of human cytochrome P450s involved in the formation of all-trans-retinoic acid principal metabolites. Mol. Pharmacol. 58, 1341-1348
-
(2000)
Mol. Pharmacol.
, vol.58
, pp. 1341-1348
-
-
Marill, J.1
Cresteil, T.2
Lanotte, M.3
Chabot, G.G.4
-
9
-
-
0025160850
-
Identification and quantitation of all-trans- and 13-cis-retinoic acid and 13-cis-4-oxoretinoic acid in human plasma
-
Eckhoff, C., and Nau, H. (1990) Identification and quantitation of all-trans- and 13-cis-retinoic acid and 13-cis-4-oxoretinoic acid in human plasma. J. Lipid Res. 31, 1445-1454 (Pubitemid 20261908)
-
(1990)
Journal of Lipid Research
, vol.31
, Issue.8
, pp. 1445-1454
-
-
Eckhoff, C.1
Nau, H.2
-
10
-
-
84857756591
-
A sensitive and specific method for measurement of multiple retinoids in human serum with UHPLC-MS/MS
-
Arnold, S. L., Amory, J. K., Walsh, T. J., and Isoherranen, N. (2012) A sensitive and specific method for measurement of multiple retinoids in human serum with UHPLC-MS/MS. J. Lipid Res. 53, 587-598
-
(2012)
J. Lipid Res.
, vol.53
, pp. 587-598
-
-
Arnold, S.L.1
Amory, J.K.2
Walsh, T.J.3
Isoherranen, N.4
-
11
-
-
0030746211
-
cDNA cloning of human retinoic acid-metabolizing enzyme (hP450RAI) identifies a novel family of cytochromes p450 (CYP26)
-
DOI 10.1074/jbc.272.30.18538
-
White, J. A., Beckett-Jones, B., Guo, Y. D., Dilworth, F. J., Bonasoro, J., Jones, G., and Petkovich, M. (1997) cDNA cloning of human retinoic acid-metabolizing enzyme (hP450RAI) identifies a novel family of cytochromes P450. J. Biol. Chem. 272, 18538-18541 (Pubitemid 27318190)
-
(1997)
Journal of Biological Chemistry
, vol.272
, Issue.30
, pp. 18538-18541
-
-
White, J.A.1
Beckett-Jones, B.2
Guo, Y.-D.3
Dilworth, F.J.4
Bonasoro, J.5
Jones, G.6
Petkovich, M.7
-
12
-
-
0034612252
-
Identification of the human cytochrome P450, P450RAI-2, which is predominantly expressed in the adult cerebellum and is responsible for all- trans-retinoic acid metabolism
-
DOI 10.1073/pnas.120161397
-
White, J. A., Ramshaw, H., Taimi, M., Stangle, W., Zhang, A., Everingham, S., Creighton, S., Tam, S. P., Jones, G., and Petkovich, M. (2000) Identification of the human cytochrome P450, P450RAI-2, which is predominantly expressed in the adult cerebellum and is responsible for all-transretinoic acid metabolism. Proc. Natl. Acad. Sci. U.S.A. 97, 6403-6408 (Pubitemid 30412726)
-
(2000)
Proceedings of the National Academy of Sciences of the United States of America
, vol.97
, Issue.12
, pp. 6403-6408
-
-
White, J.A.1
Ramshaw, H.2
Taimi, M.3
Stangle, W.4
Zhang, A.5
Everingham, S.6
Creighton, S.7
Tam, S.-P.8
Jones, G.9
Petkovich, M.10
-
13
-
-
77954761050
-
The relative importance of CYP26A1 in hepatic clearance of all-trans-retinoic acid
-
Thatcher, J. E., Zelter, A., and Isoherranen, N. (2010) The relative importance of CYP26A1 in hepatic clearance of all-trans-retinoic acid. Biochem. Pharmacol. 80, 903-912
-
(2010)
Biochem. Pharmacol.
, vol.80
, pp. 903-912
-
-
Thatcher, J.E.1
Zelter, A.2
Isoherranen, N.3
-
14
-
-
51549116267
-
Retinoic acid synthesis and signaling during early organogenesis
-
Duester, G. (2008) Retinoic acid synthesis and signaling during early organogenesis. Cell 134, 921-931
-
(2008)
Cell
, vol.134
, pp. 921-931
-
-
Duester, G.1
-
15
-
-
81855199035
-
Comparison of the function and expression of CYP26A1 and CYP26B1, the two retinoic acid hydroxylases
-
Topletz, A. R., Thatcher, J. E., Zelter, A., Lutz, J. D., Tay, S., Nelson, W. L., and Isoherranen, N. (2012) Comparison of the function and expression of CYP26A1 and CYP26B1, the two retinoic acid hydroxylases. Biochem. Pharmacol. 83, 149-163
-
(2012)
Biochem. Pharmacol.
, vol.83
, pp. 149-163
-
-
Topletz, A.R.1
Thatcher, J.E.2
Zelter, A.3
Lutz, J.D.4
Tay, S.5
Nelson, W.L.6
Isoherranen, N.7
-
16
-
-
0037199920
-
Activation of retinoic acid receptor-dependent transcription by all-trans-retinoic acid metabolites and isomers
-
DOI 10.1074/jbc.M205016200
-
Idres, N., Marill, J., Flexor, M. A., and Chabot, G. G. (2002) Activation of retinoic acid receptor-dependent transcription by all-trans-retinoic acid metabolites and isomers. J. Biol. Chem. 277, 31491-31498 (Pubitemid 34968950)
-
(2002)
Journal of Biological Chemistry
, vol.277
, Issue.35
, pp. 31491-31498
-
-
Idres, N.1
Marill, J.2
Flexor, M.A.3
Chabot, G.G.4
-
17
-
-
0027819229
-
Retinoic acid metabolites exhibit biological activity in human keratinocytes, mouse melanoma cells and hairless mouse skin in vivo
-
Reynolds, N. J., Fisher, G. J., Griffiths, C. E., Tavakkol, A., Talwar, H. S., Rowse, P. E., Hamilton, T. A., and Voorhees, J. J. (1993) Retinoic acid metabolites exhibit biological activity in human keratinocytes, mouse melanoma cells and hairless mouse skin in vivo. J. Pharmacol. Exp. Ther. 266, 1636-1642 (Pubitemid 24175815)
-
(1993)
Journal of Pharmacology and Experimental Therapeutics
, vol.266
, Issue.3
, pp. 1636-1642
-
-
Reynolds, N.J.1
Fisher, G.J.2
Griffiths, C.E.M.3
Tavakkol, A.4
Talwar, H.S.5
Rowse, P.E.6
Hamilton, T.A.7
Voorhees, J.J.8
-
18
-
-
0030850765
-
Autoinduction of retinoic acid metabolism to polar derivatives with decreased biological activity in retinoic acid-sensitive, but not in retinoic acid-resistant human breast cancer cells
-
DOI 10.1074/jbc.272.29.17921
-
van der Leede, B. M., van den Brink, C. E., Pijnappel, W. W., Sonneveld, E., van der Saag, P. T., and van der Burg, B. (1997) Autoinduction of retinoic acid metabolism to polar derivatives with decreased biological activity in retinoic acid-sensitive, but not in retinoic acid-resistant human breast cancer cells. J. Biol. Chem. 272, 17921-17928 (Pubitemid 27306367)
-
(1997)
Journal of Biological Chemistry
, vol.272
, Issue.29
, pp. 17921-17928
-
-
Van Der, L.B.-J.M.1
Van Den, B.C.E.2
Pijnappel, W.W.M.3
Sonneveld, E.4
Van Der, S.P.T.5
Van Der, B.B.6
-
19
-
-
0033568004
-
Retinoic acid hydroxylase (CYP26) is a key enzyme in neuronal differentiation of embryonal carcinoma cells
-
DOI 10.1006/dbio.1999.9381
-
Sonneveld, E., van den Brink, C. E., Tertoolen, L. G., van der Burg, B., and van der Saag, P. T. (1999) Retinoic acid hydroxylase (CYP26) is a key enzyme in neuronal differentiation of embryonal carcinoma cells. Dev. Biol. 213, 390-404 (Pubitemid 29444348)
-
(1999)
Developmental Biology
, vol.213
, Issue.2
, pp. 390-404
-
-
Sonneveld, E.1
Van Den, B.C.E.2
Tertoolen, L.G.J.3
Van Der, B.B.4
Van Der, S.P.T.5
-
20
-
-
39949083207
-
CYP26A1 knockout embryonic stem cells exhibit reduced differentiation and growth arrest in response to retinoic acid
-
Langton, S., and Gudas, L. J. (2008) CYP26A1 knockout embryonic stem cells exhibit reduced differentiation and growth arrest in response to retinoic acid. Dev. Biol. 315, 331-354
-
(2008)
Dev. Biol.
, vol.315
, pp. 331-354
-
-
Langton, S.1
Gudas, L.J.2
-
21
-
-
0036578757
-
Genetic evidence that oxidative derivatives of retinoic acid are not involved in retinoid signaling during mouse development
-
Niederreither, K., Abu-Abed, S., Schuhbaur, B., Petkovich, M., Chambon, P., and Dollé, P. (2002) Genetic evidence that oxidative derivatives of retinoic acid are not involved in retinoid signaling during mouse development. Nat. Genet. 31, 84-88
-
(2002)
Nat. Genet.
, vol.31
, pp. 84-88
-
-
Niederreither, K.1
Abu-Abed, S.2
Schuhbaur, B.3
Petkovich, M.4
Chambon, P.5
Dollé, P.6
-
22
-
-
9344235001
-
4-Oxoretinol, a new natural ligand and transactivator of the retinoic acid receptors
-
DOI 10.1073/pnas.93.10.4879
-
Achkar, C. C., Derguini, F., Blumberg, B., Langston, A., Levin, A. A., Speck, J., Evans, R. M., Bolado, J., Jr., Nakanishi, K., Buck, J., and Gudas, L. J. (1996) 4-Oxoretinol, a new natural ligand and transactivator of the retinoic acid receptors. Proc. Natl. Acad. Sci. U.S.A. 93, 4879-4884 (Pubitemid 26163499)
-
(1996)
Proceedings of the National Academy of Sciences of the United States of America
, vol.93
, Issue.10
, pp. 4879-4884
-
-
Achkar, C.C.1
Derguini, F.2
Blumberg, B.3
Langston, A.4
Levin, A.A.5
Speck, J.6
Evans, R.M.7
Bolado Jr., J.8
Nakanishi, K.9
Buck, J.10
Gudas, L.J.11
-
23
-
-
0028113183
-
Synthesis of (+)-(4S)- and (-)-(4R)-(11Z)-4-hydroxyretinals and determination of the absolute stereochemistry of a visual pigment chromophore in the firefly squid, Watasenia scintillans
-
DOI 10.1021/jo00102a014
-
Katsuta, Y., Ito, M., Yoshihara, K., Nakanishi, K., Kikkawa, T., and Fujiwara, T. (1994) Retinoids and related compounds. Part 16. Synthesis of (+)-(4S)- and (-)-(4R)-(11Z)-4-hydroxyretinals and determination of the absolutestereochemistry of a visual pigment chromaphore in the firefly squid, Watasenia scintillans. J. Org. Chem. 59, 6917-6921 (Pubitemid 24375928)
-
(1994)
Journal of Organic Chemistry
, vol.59
, Issue.23
, pp. 6917-6921
-
-
Katsuta, Y.1
Ito, M.2
Yoshihara, K.3
Nakanishi, K.4
Kikkawa, T.5
Fujiwara, T.6
-
24
-
-
38649116006
-
Stereospecificity of retinol saturase: Absolute configuration, synthesis, and biological evaluation of dihydroretinoids
-
DOI 10.1021/ja710487q
-
Moise, A. R., Domínguez, M., Alvarez, S., Alvarez, R., Schupp, M., Cristancho, A. G., Kiser, P. D., de Lera, A. R., Lazar, M. A., and Palczewski, K. (2008) Stereospecificity of retinol saturase. Absolute configuration, synthesis, and biological evaluation of dihydroretinoids. J. Am. Chem. Soc. 130, 1154-1155 (Pubitemid 351170991)
-
(2008)
Journal of the American Chemical Society
, vol.130
, Issue.4
, pp. 1154-1155
-
-
Moise, A.R.1
Dominguez, M.2
Alvarez, S.3
Alvarez, R.4
Schupp, M.5
Cristancho, A.G.6
Kiser, P.D.7
De Lera, A.R.8
Lazar, M.A.9
Palczewski, K.10
-
25
-
-
57249104707
-
Expression and functional characterization of cytochrome P450 26A1, a retinoic acid hydroxylase
-
Lutz, J. D., Dixit, V., Yeung, C. K., Dickmann, L. J., Zelter, A., Thatcher, J. E., Nelson, W. L., and Isoherranen, N. (2009) Expression and functional characterization of cytochrome P450 26A1, a retinoic acid hydroxylase. Biochem. Pharmacol. 77, 258-268
-
(2009)
Biochem. Pharmacol.
, vol.77
, pp. 258-268
-
-
Lutz, J.D.1
Dixit, V.2
Yeung, C.K.3
Dickmann, L.J.4
Zelter, A.5
Thatcher, J.E.6
Nelson, W.L.7
Isoherranen, N.8
-
26
-
-
79960203908
-
Substrate specificity and ligand interactions of CYP26A1, the human liver retinoic acid hydroxylase
-
Thatcher, J. E., Buttrick, B., Shaffer, S. A., Shimshoni, J. A., Goodlett, D. R., Nelson, W. L., and Isoherranen, N. (2011) Substrate specificity and ligand interactions of CYP26A1, the human liver retinoic acid hydroxylase. Mol. Pharmacol. 80, 228-239
-
(2011)
Mol. Pharmacol.
, vol.80
, pp. 228-239
-
-
Thatcher, J.E.1
Buttrick, B.2
Shaffer, S.A.3
Shimshoni, J.A.4
Goodlett, D.R.5
Nelson, W.L.6
Isoherranen, N.7
-
27
-
-
0035987898
-
Measurement of Michaelis constants for cytochrome P450-mediated biotransformation reactions using a substrate depletion approach
-
DOI 10.1124/dmd.30.7.831
-
Obach, R. S., and Reed-Hagen, A. E. (2002) Measurement of Michaelis constants for cytochrome P450-mediated biotransformation reactions using a substrate depletion approach. Drug. Metab. Dispos. 30, 831-837 (Pubitemid 34671096)
-
(2002)
Drug Metabolism and Disposition
, vol.30
, Issue.7
, pp. 831-837
-
-
Obach, R.S.1
Reed-Hagen, A.E.2
-
29
-
-
49649114605
-
Protein structure modeling with MODELLER
-
Eswar, N., Eramian, D., Webb, B., Shen, M. Y., and Sali, A. (2008) Protein structure modeling with MODELLER. Methods Mol. Biol. 426, 145-159
-
(2008)
Methods Mol. Biol.
, vol.426
, pp. 145-159
-
-
Eswar, N.1
Eramian, D.2
Webb, B.3
Shen, M.Y.4
Sali, A.5
-
30
-
-
0347383758
-
MODELLER: Generation and Refinement of Homology-Based Protein Structure Models
-
DOI 10.1016/S0076-6879(03)74020-8
-
Fiser, A., and Sali, A. (2003) Modeller. Generation and refinement of homology-based protein structure models. Methods Enzymol. 374, 461-491 (Pubitemid 37531821)
-
(2003)
Methods in Enzymology
, vol.374
, pp. 461-491
-
-
Fiser, A.1
Sali, A.2
-
31
-
-
45749136727
-
Crystal structures of substrate-free and retinoic acid-bound cyanobacterial cytochrome P450 CYP120A1
-
DOI 10.1021/bi800328s
-
Kühnel, K., Ke, N., Cryle, M. J., Sligar, S. G., Schuler, M. A., and Schlichting, I. (2008) Crystal structures of substrate-free and retinoic acid-bound cyanobacterial cytochrome P450 CYP120A1. Biochemistry 47, 6552-6559 (Pubitemid 351874282)
-
(2008)
Biochemistry
, vol.47
, Issue.25
, pp. 6552-6559
-
-
Kuhnel, K.1
Ke, N.2
Cryle, M.J.3
Sligar, S.G.4
Schuler, M.A.5
Schlichting, I.6
-
32
-
-
47749092044
-
Determinants of cytochrome P450 2C8 substrate binding. Structures of complexes with montelukast, troglitazone, felodipine, and 9-cis-retinoic acid
-
Schoch, G. A., Yano, J. K., Sansen, S., Dansette, P. M., Stout, C. D., and Johnson, E. F. (2008) Determinants of cytochrome P450 2C8 substrate binding. Structures of complexes with montelukast, troglitazone, felodipine, and 9-cis-retinoic acid. J. Biol. Chem. 283, 17227-17237
-
(2008)
J. Biol. Chem.
, vol.283
, pp. 17227-17237
-
-
Schoch, G.A.1
Yano, J.K.2
Sansen, S.3
Dansette, P.M.4
Stout, C.D.5
Johnson, E.F.6
-
33
-
-
0029633168
-
GROMACS. A message-passing parallel molecular dynamics implementation
-
Berendsen, H. J. C., van der Spoel, D., and Drunen, R. (1995) GROMACS. A message-passing parallel molecular dynamics implementation. Comput. Phys. Commun 91, 43-56
-
(1995)
Comput. Phys. Commun
, vol.91
, pp. 43-56
-
-
Berendsen, H.J.C.1
Van Der Spoel, D.2
Drunen, R.3
-
34
-
-
4444240014
-
Classical force field parameters for the heme prosthetic group of cytochrome c
-
Autenrieth, F., Tajkhorshid, E., Baudry, J., and Luthey-Schulten, Z. (2004) Classical force field parameters for the heme prosthetic group of cytochrome c. J. Comput. Chem. 25, 1613-1622
-
(2004)
J. Comput. Chem.
, vol.25
, pp. 1613-1622
-
-
Autenrieth, F.1
Tajkhorshid, E.2
Baudry, J.3
Luthey-Schulten, Z.4
-
35
-
-
19644374377
-
New AMBER force field parameters of heme iron for cytochrome P450s determined by quantum chemical calculations of simplified models
-
DOI 10.1002/jcc.20221
-
Oda, A., Yamaotsu, N., and Hirono, S. (2005)NewAMBERforce field parameters of heme iron for cytochrome P450s determined by quantum chemical calculations of simplified models. J. Comput. Chem. 26, 818-826 (Pubitemid 40751576)
-
(2005)
Journal of Computational Chemistry
, vol.26
, Issue.8
, pp. 818-826
-
-
Oda, A.1
Yamaotsu, N.2
Hirono, S.3
-
36
-
-
0037571112
-
Merck molecular force field. I. Basis, form, scope, parameterization and performance of MMFF94
-
Halgren, T. A. (1996) Merck molecular force field. I. Basis, form, scope, parameterization and performance of MMFF94. J. Comput. Chem. 17, 490-519
-
(1996)
J. Comput. Chem.
, vol.17
, pp. 490-519
-
-
Halgren, T.A.1
-
37
-
-
33750587438
-
Molecular dynamics with coupling to an external bath
-
Berendsen, H. J. C., Postma, J. P. M., van Gunsteren, W., DiNola, A., and Haak, J. R. (1984) Molecular dynamics with coupling to an external bath. J. Chem. Phys. 81, 3684-3690
-
(1984)
J. Chem. Phys.
, vol.81
, pp. 3684-3690
-
-
Berendsen, H.J.C.1
Postma, J.P.M.2
Van Gunsteren, W.3
DiNola, A.4
Haak, J.R.5
-
38
-
-
21244467488
-
Validation of the 53A6 GROMOS force field
-
DOI 10.1007/s00249-004-0448-6
-
Oostenbrink, C., Soares, T. A., van der Vegt, N. F., and van Gunsteren, W. F. (2005) Validation of the 53A6 GROMOS force field. Eur. Biophys. J. 34, 273-284 (Pubitemid 40884072)
-
(2005)
European Biophysics Journal
, vol.34
, Issue.4
, pp. 273-284
-
-
Oostenbrink, C.1
Soares, T.A.2
Van Der, V.N.F.A.3
Van Gunsteren, W.F.4
-
39
-
-
4444282928
-
A biomolecular force field based on the free enthalpy of hydration and solvation. The GROMOS force-field parameter sets 53A5 and 53A6
-
Oostenbrink, C., Villa, A., Mark, A. E., and van Gunsteren, W. F. (2004) A biomolecular force field based on the free enthalpy of hydration and solvation. The GROMOS force-field parameter sets 53A5 and 53A6. J. Comput. Chem. 25, 1656-1676
-
(2004)
J. Comput. Chem.
, vol.25
, pp. 1656-1676
-
-
Oostenbrink, C.1
Villa, A.2
Mark, A.E.3
Van Gunsteren, W.F.4
-
40
-
-
33846823909
-
Paraticle mesh Ewald. An N·log(N) method for Ewald sums in large systems
-
Darden, T., York, D., and Pedersen, L. (1993) Paraticle mesh Ewald. An N·log(N) method for Ewald sums in large systems. J. Chem. Phys. 98, 10089-10092
-
(1993)
J. Chem. Phys.
, vol.98
, pp. 10089-10092
-
-
Darden, T.1
York, D.2
Pedersen, L.3
-
41
-
-
33748504147
-
Homology model of human retinoic acid metabolising enzyme cytochrome P450 26A1 (CYP26A1): Active site architecture and ligand binding
-
DOI 10.1080/14756360600742014, PII JP87V32V0Q21J482
-
Gomaa, M. S., Yee, S. W., Milbourne, C. E., Barbera, M. C., Simons, C., and Brancale, A. (2006) Homology model of human retinoic acid metabolising enzyme cytochrome P450 26A1 (CYP26A1). Active site architecture and ligand binding. J. Enzyme Inhib. Med. Chem. 21, 361-369 (Pubitemid 44355784)
-
(2006)
Journal of Enzyme Inhibition and Medicinal Chemistry
, vol.21
, Issue.4
, pp. 361-369
-
-
Gomaa, M.S.1
Yee, S.W.2
Milbourne, C.E.3
Barbera, M.C.4
Simons, C.5
Brancale, A.6
-
42
-
-
58149121148
-
Homology models and molecular modeling of human retinoic acid metabolizing enzymes cytochrome P450 26A1 (CYP26A1) and P450 26B1 (CYP26B1)
-
Karlsson, M., Strid, A., Sirsjo, A., and Eriksson, L. A. (2008) Homology models and molecular modeling of human retinoic acid metabolizing enzymes cytochrome P450 26A1 (CYP26A1) and P450 26B1 (CYP26B1). J. Chem. Theory Comput. 4, 1021-1027
-
(2008)
J. Chem. Theory Comput.
, vol.4
, pp. 1021-1027
-
-
Karlsson, M.1
Strid, A.2
Sirsjo, A.3
Eriksson, L.A.4
-
43
-
-
45849104255
-
Structure predication and R115866 binding study of human CYP26A1. Homology modeling, fold recognition, molecular docking and MD simulations
-
Ren, J. H., Xiong, X. Q., Sha, Y., Yan, M. C., Lin, B., Wang, J., Jing, Y. K., Zhao, D. M., and Cheng, M. S. (2008) Structure predication and R115866 binding study of human CYP26A1. Homology modeling, fold recognition, molecular docking and MD simulations. Mol. Simul. 34, 337-346
-
(2008)
Mol. Simul.
, vol.34
, pp. 337-346
-
-
Ren, J.H.1
Xiong, X.Q.2
Sha, Y.3
Yan, M.C.4
Lin, B.5
Wang, J.6
Jing, Y.K.7
Zhao, D.M.8
Cheng, M.S.9
-
44
-
-
0030767485
-
VERIFY3D. Assessment of protein models with three-dimensional profiles
-
Eisenberg, D., Lüthy, R., and Bowie, J. U. (1997) VERIFY3D. Assessment of protein models with three-dimensional profiles. Methods Enzymol. 277, 396-404
-
(1997)
Methods Enzymol.
, vol.277
, pp. 396-404
-
-
Eisenberg, D.1
Lüthy, R.2
Bowie, J.U.3
-
45
-
-
0027180507
-
Verification of protein structures: Patterns of nonbonded atomic interactions
-
Colovos, C., and Yeates, T. O. (1993) Verification of protein structures. Patterns of nonbonded atomic interactions. Protein Sci. 2, 1511-1519 (Pubitemid 23262844)
-
(1993)
Protein Science
, vol.2
, Issue.9
, pp. 1511-1519
-
-
Colovos, C.1
Yeates, T.O.2
-
46
-
-
76149120388
-
AutoDock Vina. Improving the speed and accuracy of docking with a new scoring function, efficient optimization, and multi-threading
-
Trott, O., and Olson, A. J. (2010) AutoDock Vina. Improving the speed and accuracy of docking with a new scoring function, efficient optimization, and multi-threading. J. Comput. Chem. 31, 455-461
-
(2010)
J. Comput. Chem.
, vol.31
, pp. 455-461
-
-
Trott, O.1
Olson, A.J.2
-
48
-
-
84856266049
-
Structural and mechanistic insights into the interaction of cytochrome P4503A4 with bromoergocryptine, a type i ligand
-
Sevrioukova, I. F., and Poulos, T. L. (2012) Structural and mechanistic insights into the interaction of cytochrome P4503A4 with bromoergocryptine, a type I ligand. J. Biol. Chem. 287, 3510-3517
-
(2012)
J. Biol. Chem.
, vol.287
, pp. 3510-3517
-
-
Sevrioukova, I.F.1
Poulos, T.L.2
-
49
-
-
78649885201
-
Structure and mechanism of the complex between cytochrome P4503A4 and ritonavir
-
Sevrioukova, I. F., and Poulos, T. L. (2010) Structure and mechanism of the complex between cytochrome P4503A4 and ritonavir. Proc. Natl. Acad. Sci. U.S.A. 107, 18422-18427
-
(2010)
Proc. Natl. Acad. Sci. U.S.A.
, vol.107
, pp. 18422-18427
-
-
Sevrioukova, I.F.1
Poulos, T.L.2
-
50
-
-
4644301430
-
The structure of human microsomal cytochrome P450 3A4 determined by X-ray crystallography to 2.05-Å resolution
-
DOI 10.1074/jbc.C400293200
-
Yano, J. K., Wester, M. R., Schoch, G. A., Griffin, K. J., Stout, C. D., and Johnson, E. F. (2004) The structure of human microsomal cytochrome P450 3A4 determined by x-ray crystallography to 2.05-Å resolution. J. Biol. Chem. 279, 38091-38094 (Pubitemid 39295952)
-
(2004)
Journal of Biological Chemistry
, vol.279
, Issue.37
, pp. 38091-38094
-
-
Yano, J.K.1
Wester, M.R.2
Schoch, G.A.3
Griffin, K.J.4
Stout, C.D.5
Johnson, E.F.6
-
51
-
-
3442896773
-
Crystal structures of human cytochrome P450 3A4 bound to metyrapone and progesterone
-
DOI 10.1126/science.1099736
-
Williams, P. A., Cosme, J., Vinkovic, D. M., Ward, A., Angove, H. C., Day, P. J., Vonrhein, C., Tickle, I. J., and Jhoti, H. (2004) Crystal structures of human cytochrome P450 3A4 bound to metyrapone and progesterone. Science 305, 683-686 (Pubitemid 39006760)
-
(2004)
Science
, vol.305
, Issue.5684
, pp. 683-686
-
-
Williams, P.A.1
Cosme, J.2
Matak, V.D.3
Ward, A.4
Angove, H.C.5
Day, P.J.6
Vonrhein, C.7
Tickle, I.J.8
Jhoti, H.9
-
52
-
-
33845282886
-
Highly enantioselective borane reduction of ketones catalyzed by chiral oxazaborolidines. Mechanism and synthetic implications
-
Corey, E. J., Bakshi, R. K., and Shibata, S. (1987) Highly enantioselective borane reduction of ketones catalyzed by chiral oxazaborolidines. Mechanism and synthetic implications. J. Am. Chem. Soc. 109, 5551-5553
-
(1987)
J. Am. Chem. Soc.
, vol.109
, pp. 5551-5553
-
-
Corey, E.J.1
Bakshi, R.K.2
Shibata, S.3
-
53
-
-
0000002955
-
Circular dichroism exciton chirality method. New red-shifted chromophores for hydroxyl groups
-
Cai, G., Bozhkova, N., Odingo, J., Berova, N., and Nakanishi, K. (1993) Circular dichroism exciton chirality method. New red-shifted chromophores for hydroxyl groups. J. Am. Chem. Soc. 115, 7192-7198
-
(1993)
J. Am. Chem. Soc.
, vol.115
, pp. 7192-7198
-
-
Cai, G.1
Bozhkova, N.2
Odingo, J.3
Berova, N.4
Nakanishi, K.5
-
54
-
-
0025953871
-
Expression of cellular retinoic acid binding protein (CRABP) in escherichia coli characterization and evidence that holo-crabp is a substrate in retinoic acid metabolism
-
Fiorella, P. D., and Napoli, J. L. (1991) Expression of cellular retinoic acid-binding protein (CRABP) in Escherichia coli. Characterization and evidence that holo-CRABP is a substrate in retinoic acid metabolism. J. Biol. Chem. 266, 16572-16579 (Pubitemid 21907837)
-
(1991)
Journal of Biological Chemistry
, vol.266
, Issue.25
, pp. 16572-16579
-
-
Fiorella, P.D.1
Napoli, J.L.2
-
55
-
-
77349091080
-
Hydrocarbon hydroxylation by cytochrome P450 enzymes
-
Ortiz de Montellano, P. R. (2010) Hydrocarbon hydroxylation by cytochrome P450 enzymes. Chem. Rev. 110, 932-948
-
(2010)
Chem. Rev.
, vol.110
, pp. 932-948
-
-
Ortiz De Montellano, P.R.1
|