메뉴 건너뛰기




Volumn 151, Issue 6, 2012, Pages 1243-1255

Piwi-interacting RNAs protect DNA against loss during oxytricha genome rearrangement

Author keywords

[No Author keywords available]

Indexed keywords

DNA; PIWI INTERACTING RNA;

EID: 84870860974     PISSN: 00928674     EISSN: 10974172     Source Type: Journal    
DOI: 10.1016/j.cell.2012.10.045     Document Type: Article
Times cited : (123)

References (77)
  • 6
    • 0347444723 scopus 로고    scopus 로고
    • MicroRNAs: Genomics, biogenesis, mechanism, and function
    • D.P. Bartel MicroRNAs: genomics, biogenesis, mechanism, and function Cell 116 2004 281 297
    • (2004) Cell , vol.116 , pp. 281-297
    • Bartel, D.P.1
  • 7
    • 79960056273 scopus 로고    scopus 로고
    • Functional specialization of Piwi proteins in Paramecium tetraurelia from post-transcriptional gene silencing to genome remodelling
    • K. Bouhouche, J.F. Gout, A. Kapusta, M. Bétermier, and E. Meyer Functional specialization of Piwi proteins in Paramecium tetraurelia from post-transcriptional gene silencing to genome remodelling Nucleic Acids Res. 39 2011 4249 4264
    • (2011) Nucleic Acids Res. , vol.39 , pp. 4249-4264
    • Bouhouche, K.1    Gout, J.F.2    Kapusta, A.3    Bétermier, M.4    Meyer, E.5
  • 8
    • 33947273235 scopus 로고    scopus 로고
    • Discrete small RNA-generating loci as master regulators of transposon activity in Drosophila
    • J. Brennecke, A.A. Aravin, A. Stark, M. Dus, M. Kellis, R. Sachidanandam, and G.J. Hannon Discrete small RNA-generating loci as master regulators of transposon activity in Drosophila Cell 128 2007 1089 1103
    • (2007) Cell , vol.128 , pp. 1089-1103
    • Brennecke, J.1    Aravin, A.A.2    Stark, A.3    Dus, M.4    Kellis, M.5    Sachidanandam, R.6    Hannon, G.J.7
  • 11
    • 0029953126 scopus 로고    scopus 로고
    • Non-Mendelian, heritable blocks to DNA rearrangement are induced by loading the somatic nucleus of Tetrahymena thermophila with germ line-limited DNA
    • D.L. Chalker, and M.C. Yao Non-Mendelian, heritable blocks to DNA rearrangement are induced by loading the somatic nucleus of Tetrahymena thermophila with germ line-limited DNA Mol. Cell. Biol. 16 1996 3658 3667
    • (1996) Mol. Cell. Biol. , vol.16 , pp. 3658-3667
    • Chalker, D.L.1    Yao, M.C.2
  • 12
    • 69749100606 scopus 로고    scopus 로고
    • Sequence, biogenesis, and function of diverse small RNA classes bound to the Piwi family proteins of Tetrahymena thermophila
    • M.T. Couvillion, S.R. Lee, B. Hogstad, C.D. Malone, L.A. Tonkin, R. Sachidanandam, G.J. Hannon, and K. Collins Sequence, biogenesis, and function of diverse small RNA classes bound to the Piwi family proteins of Tetrahymena thermophila Genes Dev. 23 2009 2016 2032
    • (2009) Genes Dev. , vol.23 , pp. 2016-2032
    • Couvillion, M.T.1    Lee, S.R.2    Hogstad, B.3    Malone, C.D.4    Tonkin, L.A.5    Sachidanandam, R.6    Hannon, G.J.7    Collins, K.8
  • 13
    • 84858714140 scopus 로고    scopus 로고
    • Whole genome studies of Tetrahymena
    • K. Collins, Academic Press New York
    • R.S. Coyne, N.A. Stover, and W. Miao Whole genome studies of Tetrahymena K. Collins, Methods in Cell Biology 2012 Academic Press New York 53 81
    • (2012) Methods in Cell Biology , pp. 53-81
    • Coyne, R.S.1    Stover, N.A.2    Miao, W.3
  • 15
    • 0029103019 scopus 로고
    • Epigenetic self-regulation of developmental excision of an internal eliminated sequence on Paramecium tetraurelia
    • S. Duharcourt, A. Butler, and E. Meyer Epigenetic self-regulation of developmental excision of an internal eliminated sequence on Paramecium tetraurelia Genes Dev. 9 1995 2065 2077
    • (1995) Genes Dev. , vol.9 , pp. 2065-2077
    • Duharcourt, S.1    Butler, A.2    Meyer, E.3
  • 16
    • 0036081355 scopus 로고    scopus 로고
    • Gene Expression Omnibus: NCBI gene expression and hybridization array data repository
    • R. Edgar, M. Domrachev, and A.E. Lash Gene Expression Omnibus: NCBI gene expression and hybridization array data repository Nucleic Acids Res. 30 2002 207 210
    • (2002) Nucleic Acids Res. , vol.30 , pp. 207-210
    • Edgar, R.1    Domrachev, M.2    Lash, A.E.3
  • 17
    • 3042666256 scopus 로고    scopus 로고
    • MUSCLE: Multiple sequence alignment with high accuracy and high throughput
    • R.C. Edgar MUSCLE: multiple sequence alignment with high accuracy and high throughput Nucleic Acids Res. 32 2004 1792 1797
    • (2004) Nucleic Acids Res. , vol.32 , pp. 1792-1797
    • Edgar, R.C.1
  • 18
    • 79959298599 scopus 로고    scopus 로고
    • PiRNA profiling during specific stages of mouse spermatogenesis
    • H. Gan, X. Lin, Z. Zhang, W. Zhang, S. Liao, L. Wang, and C. Han piRNA profiling during specific stages of mouse spermatogenesis RNA 17 2011 1191 1203
    • (2011) RNA , vol.17 , pp. 1191-1203
    • Gan, H.1    Lin, X.2    Zhang, Z.3    Zhang, W.4    Liao, S.5    Wang, L.6    Han, C.7
  • 19
    • 33745336617 scopus 로고    scopus 로고
    • A germline-specific class of small RNAs binds mammalian Piwi proteins
    • A. Girard, R. Sachidanandam, G.J. Hannon, and M.A. Carmell A germline-specific class of small RNAs binds mammalian Piwi proteins Nature 442 2006 199 202
    • (2006) Nature , vol.442 , pp. 199-202
    • Girard, A.1    Sachidanandam, R.2    Hannon, G.J.3    Carmell, M.A.4
  • 21
    • 33745621037 scopus 로고    scopus 로고
    • A novel class of small RNAs in mouse spermatogenic cells
    • S.T. Grivna, E. Beyret, Z. Wang, and H. Lin A novel class of small RNAs in mouse spermatogenic cells Genes Dev. 20 2006 1709 1714
    • (2006) Genes Dev. , vol.20 , pp. 1709-1714
    • Grivna, S.T.1    Beyret, E.2    Wang, Z.3    Lin, H.4
  • 22
    • 84856239588 scopus 로고    scopus 로고
    • Amplification of siRNA in Caenorhabditis elegans generates a transgenerational sequence-targeted histone H3 lysine 9 methylation footprint
    • S.G. Gu, J. Pak, S. Guang, J.M. Maniar, S. Kennedy, and A. Fire Amplification of siRNA in Caenorhabditis elegans generates a transgenerational sequence-targeted histone H3 lysine 9 methylation footprint Nat. Genet. 44 2012 157 164
    • (2012) Nat. Genet. , vol.44 , pp. 157-164
    • Gu, S.G.1    Pak, J.2    Guang, S.3    Maniar, J.M.4    Kennedy, S.5    Fire, A.6
  • 23
    • 77950806408 scopus 로고    scopus 로고
    • New algorithms and methods to estimate maximum-likelihood phylogenies: Assessing the performance of PhyML 3.0
    • S. Guindon, J.F. Dufayard, V. Lefort, M. Anisimova, W. Hordijk, and O. Gascuel New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0 Syst. Biol. 59 2010 307 321
    • (2010) Syst. Biol. , vol.59 , pp. 307-321
    • Guindon, S.1    Dufayard, J.F.2    Lefort, V.3    Anisimova, M.4    Hordijk, W.5    Gascuel, O.6
  • 25
    • 34247259831 scopus 로고    scopus 로고
    • Mouse Piwi-interacting RNAs are 2′-O-methylated at their 3′ termini
    • Y. Kirino, and Z. Mourelatos Mouse Piwi-interacting RNAs are 2′-O-methylated at their 3′ termini Nat. Struct. Mol. Biol. 14 2007 347 348
    • (2007) Nat. Struct. Mol. Biol. , vol.14 , pp. 347-348
    • Kirino, Y.1    Mourelatos, Z.2
  • 26
    • 62549159996 scopus 로고    scopus 로고
    • 2′-O-methylation stabilizes Piwi-associated small RNAs and ensures DNA elimination in Tetrahymena
    • H.M. Kurth, and K. Mochizuki 2′-O-methylation stabilizes Piwi-associated small RNAs and ensures DNA elimination in Tetrahymena RNA 15 2009 675 685
    • (2009) RNA , vol.15 , pp. 675-685
    • Kurth, H.M.1    Mochizuki, K.2
  • 28
    • 84863624978 scopus 로고    scopus 로고
    • C. elegans piRNAs mediate the genome-wide surveillance of germline transcripts
    • H.C. Lee, W. Gu, M. Shirayama, E. Youngman, D. Conte Jr.; and C.C. Mello C. elegans piRNAs mediate the genome-wide surveillance of germline transcripts Cell 150 2012 78 87
    • (2012) Cell , vol.150 , pp. 78-87
    • Lee, H.C.1    Gu, W.2    Shirayama, M.3    Youngman, E.4    Conte, Jr.D.5    Mello, C.C.6
  • 29
    • 29944442623 scopus 로고    scopus 로고
    • Two classes of endogenous small RNAs in Tetrahymena thermophila
    • S.R. Lee, and K. Collins Two classes of endogenous small RNAs in Tetrahymena thermophila Genes Dev. 20 2006 28 33
    • (2006) Genes Dev. , vol.20 , pp. 28-33
    • Lee, S.R.1    Collins, K.2
  • 30
    • 44849120634 scopus 로고    scopus 로고
    • Maternal noncoding transcripts antagonize the targeting of DNA elimination by scanRNAs in Paramecium tetraurelia
    • G. Lepère, M. Bétermier, E. Meyer, and S. Duharcourt Maternal noncoding transcripts antagonize the targeting of DNA elimination by scanRNAs in Paramecium tetraurelia Genes Dev. 22 2008 1501 1512
    • (2008) Genes Dev. , vol.22 , pp. 1501-1512
    • Lepère, G.1    Bétermier, M.2    Meyer, E.3    Duharcourt, S.4
  • 32
    • 23944493378 scopus 로고    scopus 로고
    • Methylation protects miRNAs and siRNAs from a 3′-end uridylation activity in Arabidopsis
    • J. Li, Z. Yang, B. Yu, J. Liu, and X. Chen Methylation protects miRNAs and siRNAs from a 3′-end uridylation activity in Arabidopsis Curr. Biol. 15 2005 1501 1507
    • (2005) Curr. Biol. , vol.15 , pp. 1501-1507
    • Li, J.1    Yang, Z.2    Yu, B.3    Liu, J.4    Chen, X.5
  • 33
    • 1242319537 scopus 로고    scopus 로고
    • Histone H3 lysine 9 methylation is required for DNA elimination in developing macronuclei in Tetrahymena
    • Y. Liu, K. Mochizuki, and M.A. Gorovsky Histone H3 lysine 9 methylation is required for DNA elimination in developing macronuclei in Tetrahymena Proc. Natl. Acad. Sci. USA 101 2004 1679 1684
    • (2004) Proc. Natl. Acad. Sci. USA , vol.101 , pp. 1679-1684
    • Liu, Y.1    Mochizuki, K.2    Gorovsky, M.A.3
  • 34
    • 34250735582 scopus 로고    scopus 로고
    • RNAi-dependent H3K27 methylation is required for heterochromatin formation and DNA elimination in Tetrahymena
    • Y. Liu, S.D. Taverna, T.L. Muratore, J. Shabanowitz, D.F. Hunt, and C.D. Allis RNAi-dependent H3K27 methylation is required for heterochromatin formation and DNA elimination in Tetrahymena Genes Dev. 21 2007 1530 1545
    • (2007) Genes Dev. , vol.21 , pp. 1530-1545
    • Liu, Y.1    Taverna, S.D.2    Muratore, T.L.3    Shabanowitz, J.4    Hunt, D.F.5    Allis, C.D.6
  • 35
    • 60149098474 scopus 로고    scopus 로고
    • Small RNAs as guardians of the genome
    • C.D. Malone, and G.J. Hannon Small RNAs as guardians of the genome Cell 136 2009 656 668
    • (2009) Cell , vol.136 , pp. 656-668
    • Malone, C.D.1    Hannon, G.J.2
  • 37
    • 4444383501 scopus 로고    scopus 로고
    • Conjugation-specific small RNAs in Tetrahymena have predicted properties of scan (scn) RNAs involved in genome rearrangement
    • K. Mochizuki, and M.A. Gorovsky Conjugation-specific small RNAs in Tetrahymena have predicted properties of scan (scn) RNAs involved in genome rearrangement Genes Dev. 18 2004 2068 2073
    • (2004) Genes Dev. , vol.18 , pp. 2068-2073
    • Mochizuki, K.1    Gorovsky, M.A.2
  • 38
    • 0037145031 scopus 로고    scopus 로고
    • Analysis of a piwi-related gene implicates small RNAs in genome rearrangement in Tetrahymena
    • K. Mochizuki, N.A. Fine, T. Fujisawa, and M.A. Gorovsky Analysis of a piwi-related gene implicates small RNAs in genome rearrangement in Tetrahymena Cell 110 2002 689 699
    • (2002) Cell , vol.110 , pp. 689-699
    • Mochizuki, K.1    Fine, N.A.2    Fujisawa, T.3    Gorovsky, M.A.4
  • 43
    • 33846527241 scopus 로고    scopus 로고
    • Distinct populations of primary and secondary effectors during RNAi in C. elegans
    • J. Pak, and A. Fire Distinct populations of primary and secondary effectors during RNAi in C. elegans Science 315 2007 241 244
    • (2007) Science , vol.315 , pp. 241-244
    • Pak, J.1    Fire, A.2
  • 44
    • 80052019696 scopus 로고    scopus 로고
    • Estimating the timing of early eukaryotic diversification with multigene molecular clocks
    • L.W. Parfrey, D.J. Lahr, A.H. Knoll, and L.A. Katz Estimating the timing of early eukaryotic diversification with multigene molecular clocks Proc. Natl. Acad. Sci. USA 108 2011 13624 13629
    • (2011) Proc. Natl. Acad. Sci. USA , vol.108 , pp. 13624-13629
    • Parfrey, L.W.1    Lahr, D.J.2    Knoll, A.H.3    Katz, L.A.4
  • 45
    • 0033570886 scopus 로고    scopus 로고
    • A theoretical approach to select effective antisense oligodeoxyribonucleotides at high statistical probability
    • V. Patzel, U. Steidl, R. Kronenwett, R. Haas, and G. Sczakiel A theoretical approach to select effective antisense oligodeoxyribonucleotides at high statistical probability Nucleic Acids Res. 27 1999 4328 4334
    • (1999) Nucleic Acids Res. , vol.27 , pp. 4328-4334
    • Patzel, V.1    Steidl, U.2    Kronenwett, R.3    Haas, R.4    Sczakiel, G.5
  • 46
    • 0034574433 scopus 로고    scopus 로고
    • Genome gymnastics: Unique modes of DNA evolution and processing in ciliates
    • D.M. Prescott Genome gymnastics: unique modes of DNA evolution and processing in ciliates Nat. Rev. Genet. 1 2000 191 198
    • (2000) Nat. Rev. Genet. , vol.1 , pp. 191-198
    • Prescott, D.M.1
  • 47
    • 84860320656 scopus 로고    scopus 로고
    • A role for neuronal piRNAs in the epigenetic control of memory-related synaptic plasticity
    • P. Rajasethupathy, I. Antonov, R. Sheridan, S. Frey, C. Sander, T. Tuschl, and E.R. Kandel A role for neuronal piRNAs in the epigenetic control of memory-related synaptic plasticity Cell 149 2012 693 707
    • (2012) Cell , vol.149 , pp. 693-707
    • Rajasethupathy, P.1    Antonov, I.2    Sheridan, R.3    Frey, S.4    Sander, C.5    Tuschl, T.6    Kandel, E.R.7
  • 50
    • 33747369856 scopus 로고    scopus 로고
    • Specific association of Piwi with rasiRNAs derived from retrotransposon and heterochromatic regions in the Drosophila genome
    • K. Saito, K.M. Nishida, T. Mori, Y. Kawamura, K. Miyoshi, T. Nagami, H. Siomi, and M.C. Siomi Specific association of Piwi with rasiRNAs derived from retrotransposon and heterochromatic regions in the Drosophila genome Genes Dev. 20 2006 2214 2222
    • (2006) Genes Dev. , vol.20 , pp. 2214-2222
    • Saito, K.1    Nishida, K.M.2    Mori, T.3    Kawamura, Y.4    Miyoshi, K.5    Nagami, T.6    Siomi, H.7    Siomi, M.C.8
  • 51
    • 34347378274 scopus 로고    scopus 로고
    • Pimet, the Drosophila homolog of HEN1, mediates 2′-O-methylation of Piwi- interacting RNAs at their 3′ ends
    • K. Saito, Y. Sakaguchi, T. Suzuki, T. Suzuki, H. Siomi, and M.C. Siomi Pimet, the Drosophila homolog of HEN1, mediates 2′-O-methylation of Piwi- interacting RNAs at their 3′ ends Genes Dev. 21 2007 1603 1608
    • (2007) Genes Dev. , vol.21 , pp. 1603-1608
    • Saito, K.1    Sakaguchi, Y.2    Suzuki, T.3    Suzuki, T.4    Siomi, H.5    Siomi, M.C.6
  • 53
    • 84864757507 scopus 로고    scopus 로고
    • Biased transcription and selective degradation of small RNAs shape the pattern of DNA elimination in Tetrahymena
    • U.E. Schoeberl, H.M. Kurth, T. Noto, and K. Mochizuki Biased transcription and selective degradation of small RNAs shape the pattern of DNA elimination in Tetrahymena Genes Dev. 26 2012 1729 1742
    • (2012) Genes Dev. , vol.26 , pp. 1729-1742
    • Schoeberl, U.E.1    Kurth, H.M.2    Noto, T.3    Mochizuki, K.4
  • 54
    • 34249805994 scopus 로고    scopus 로고
    • The coming of age for Piwi proteins
    • A.G. Seto, R.E. Kingston, and N.C. Lau The coming of age for Piwi proteins Mol. Cell 26 2007 603 609
    • (2007) Mol. Cell , vol.26 , pp. 603-609
    • Seto, A.G.1    Kingston, R.E.2    Lau, N.C.3
  • 55
    • 84863631177 scopus 로고    scopus 로고
    • PiRNAs initiate an epigenetic memory of nonself RNA in the C. elegans germline
    • M. Shirayama, M. Seth, H.C. Lee, W. Gu, T. Ishidate, D. Conte Jr.; and C.C. Mello piRNAs initiate an epigenetic memory of nonself RNA in the C. elegans germline Cell 150 2012 65 77
    • (2012) Cell , vol.150 , pp. 65-77
    • Shirayama, M.1    Seth, M.2    Lee, H.C.3    Gu, W.4    Ishidate, T.5    Conte, Jr.D.6    Mello, C.C.7
  • 56
    • 33846524902 scopus 로고    scopus 로고
    • Secondary siRNAs result from unprimed RNA synthesis and form a distinct class
    • T. Sijen, F.A. Steiner, K.L. Thijssen, and R.H. Plasterk Secondary siRNAs result from unprimed RNA synthesis and form a distinct class Science 315 2007 244 247
    • (2007) Science , vol.315 , pp. 244-247
    • Sijen, T.1    Steiner, F.A.2    Thijssen, K.L.3    Plasterk, R.H.4
  • 57
    • 44849108310 scopus 로고    scopus 로고
    • RNA-mediated DNA modifications and RNA-templated DNA repair
    • F. Storici RNA-mediated DNA modifications and RNA-templated DNA repair Curr. Opin. Mol. Ther. 10 2008 224 230
    • (2008) Curr. Opin. Mol. Ther. , vol.10 , pp. 224-230
    • Storici, F.1
  • 58
    • 79551634514 scopus 로고    scopus 로고
    • Structural basis for piRNA 2′-O-methylated 3′-end recognition by Piwi PAZ (Piwi/Argonaute/Zwille) domains
    • Y. Tian, D.K. Simanshu, J.B. Ma, and D.J. Patel Structural basis for piRNA 2′-O-methylated 3′-end recognition by Piwi PAZ (Piwi/Argonaute/Zwille) domains Proc. Natl. Acad. Sci. USA 108 2011 903 910
    • (2011) Proc. Natl. Acad. Sci. USA , vol.108 , pp. 903-910
    • Tian, Y.1    Simanshu, D.K.2    Ma, J.B.3    Patel, D.J.4
  • 59
    • 33746502166 scopus 로고    scopus 로고
    • A distinct small RNA pathway silences selfish genetic elements in the germline
    • V.V. Vagin, A. Sigova, C. Li, H. Seitz, V. Gvozdev, and P.D. Zamore A distinct small RNA pathway silences selfish genetic elements in the germline Science 313 2006 320 324
    • (2006) Science , vol.313 , pp. 320-324
    • Vagin, V.V.1    Sigova, A.2    Li, C.3    Seitz, H.4    Gvozdev, V.5    Zamore, P.D.6
  • 61
    • 0037072661 scopus 로고    scopus 로고
    • Regulation of heterochromatic silencing and histone H3 lysine-9 methylation by RNAi
    • T.A. Volpe, C. Kidner, I.M. Hall, G. Teng, S.I. Grewal, and R.A. Martienssen Regulation of heterochromatic silencing and histone H3 lysine-9 methylation by RNAi Science 297 2002 1833 1837
    • (2002) Science , vol.297 , pp. 1833-1837
    • Volpe, T.A.1    Kidner, C.2    Hall, I.M.3    Teng, G.4    Grewal, S.I.5    Martienssen, R.A.6
  • 62
    • 80052521105 scopus 로고    scopus 로고
    • Deep small RNA sequencing from the nematode Ascaris reveals conservation, functional diversification, and novel developmental profiles
    • J. Wang, B. Czech, A. Crunk, A. Wallace, M. Mitreva, G.J. Hannon, and R.E. Davis Deep small RNA sequencing from the nematode Ascaris reveals conservation, functional diversification, and novel developmental profiles Genome Res. 21 2011 1462 1477
    • (2011) Genome Res. , vol.21 , pp. 1462-1477
    • Wang, J.1    Czech, B.2    Crunk, A.3    Wallace, A.4    Mitreva, M.5    Hannon, G.J.6    Davis, R.E.7
  • 63
    • 0028031830 scopus 로고
    • RNA-directed de novo methylation of genomic sequences in plants
    • M. Wassenegger, S. Heimes, L. Riedel, and H.L. Sänger RNA-directed de novo methylation of genomic sequences in plants Cell 76 1994 567 576
    • (1994) Cell , vol.76 , pp. 567-576
    • Wassenegger, M.1    Heimes, S.2    Riedel, L.3    Sänger, H.L.4
  • 64
    • 33745599586 scopus 로고    scopus 로고
    • Identification and characterization of two novel classes of small RNAs in the mouse germline: Retrotransposon-derived siRNAs in oocytes and germline small RNAs in testes
    • T. Watanabe, A. Takeda, T. Tsukiyama, K. Mise, T. Okuno, H. Sasaki, N. Minami, and H. Imai Identification and characterization of two novel classes of small RNAs in the mouse germline: retrotransposon-derived siRNAs in oocytes and germline small RNAs in testes Genes Dev. 20 2006 1732 1743
    • (2006) Genes Dev. , vol.20 , pp. 1732-1743
    • Watanabe, T.1    Takeda, A.2    Tsukiyama, T.3    Mise, K.4    Okuno, T.5    Sasaki, H.6    Minami, N.7    Imai, H.8
  • 67
    • 0030807656 scopus 로고    scopus 로고
    • Selection on the protein-coding genes of the TBE1 family of transposable elements in the ciliates Oxytricha fallax and O. trifallax
    • D.J. Witherspoon, T.G. Doak, K.R. Williams, A. Seegmiller, J. Seger, and G. Herrick Selection on the protein-coding genes of the TBE1 family of transposable elements in the ciliates Oxytricha fallax and O. trifallax Mol. Biol. Evol. 14 1997 696 706
    • (1997) Mol. Biol. Evol. , vol.14 , pp. 696-706
    • Witherspoon, D.J.1    Doak, T.G.2    Williams, K.R.3    Seegmiller, A.4    Seger, J.5    Herrick, G.6
  • 68
    • 0038581529 scopus 로고    scopus 로고
    • Programmed DNA deletion as an RNA-guided system of genome defense
    • M.C. Yao, P. Fuller, and X. Xi Programmed DNA deletion as an RNA-guided system of genome defense Science 300 2003 1581 1584
    • (2003) Science , vol.300 , pp. 1581-1584
    • Yao, M.C.1    Fuller, P.2    Xi, X.3
  • 69
    • 84865010587 scopus 로고    scopus 로고
    • Mating of the stichotrichous ciliate Oxytricha trifallax induces production of a class of 27 nt small RNAs derived from the parental macronucleus
    • A.M. Zahler, Z.T. Neeb, A. Lin, and S. Katzman Mating of the stichotrichous ciliate Oxytricha trifallax induces production of a class of 27 nt small RNAs derived from the parental macronucleus PLoS ONE 7 2012 e42371
    • (2012) PLoS ONE , vol.7 , pp. 42371
    • Zahler, A.M.1    Neeb, Z.T.2    Lin, A.3    Katzman, S.4
  • 70
    • 24644446398 scopus 로고    scopus 로고
    • Ribo-gnome: The big world of small RNAs
    • P.D. Zamore, and B. Haley Ribo-gnome: the big world of small RNAs Science 309 2005 1519 1524
    • (2005) Science , vol.309 , pp. 1519-1524
    • Zamore, P.D.1    Haley, B.2
  • 71
    • 57149118220 scopus 로고    scopus 로고
    • Small RNAs with 5′-polyphosphate termini associate with a Piwi-related protein and regulate gene expression in the single-celled eukaryote Entamoeba histolytica
    • H. Zhang, G.M. Ehrenkaufer, J.M. Pompey, J.A. Hackney, and U. Singh Small RNAs with 5′-polyphosphate termini associate with a Piwi-related protein and regulate gene expression in the single-celled eukaryote Entamoeba histolytica PLoS Pathog. 4 2008 e1000219
    • (2008) PLoS Pathog. , vol.4 , pp. 1000219
    • Zhang, H.1    Ehrenkaufer, G.M.2    Pompey, J.M.3    Hackney, J.A.4    Singh, U.5
  • 73
    • 79953310937 scopus 로고    scopus 로고
    • SHRiMP2: Sensitive yet practical SHort Read Mapping
    • David, M.; Dzamba, M.; Lister, D.; Ilie, L.; and Brudno, M. (2011). SHRiMP2: sensitive yet practical SHort Read Mapping. Bioinformatics 27, 1011-1012.
    • (2011) Bioinformatics , vol.27 , pp. 1011-1012
    • David, M.1    Dzamba, M.2    Lister, D.3    Ilie, L.4    Brudno, M.5
  • 75
    • 77955801615 scopus 로고    scopus 로고
    • Galaxy: A comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences
    • Goecks, J.; Nekrutenko, A.; and Taylor, J.; Galaxy Team (2010). Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences. Genome Biol. 11, R86.
    • (2010) Genome Biol. , vol.11
    • Goecks, J.1    Nekrutenko, A.2    Taylor, J.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.