-
2
-
-
33747180898
-
Evolutionary biology: How did the human species form? Curr
-
Barton NH. 2006. Evolutionary biology: How did the human species form? Curr. Biol. 16:R647-50
-
(2006)
Biol.
, vol.16
-
-
Barton, N.H.1
-
3
-
-
2442677652
-
Genetic signatures of strong recent positive selection at the lactase gene
-
Bersaglieri T, Sabeti PC, Patterson N, Vanderploeg T, Schaffner SF, et al. 2004. Genetic signatures of strong recent positive selection at the lactase gene. Am. J. Hum. Genet. 74:1111-20
-
(2004)
Am. J. Hum. Genet.
, vol.74
, pp. 1111-1120
-
-
Bersaglieri, T.1
Sabeti, P.C.2
Patterson, N.3
Vanderploeg, T.4
Schaffner, S.F.5
-
4
-
-
52049123852
-
Estimation of 2Nes from temporal allele frequency data
-
Bollback JP, YorkTL, Nielsen R. 2008. Estimation of 2Nes from temporal allele frequency data. Genetics 179:497-502
-
(2008)
Genetics
, vol.179
, pp. 497-502
-
-
Bollback, J.P.1
York, T.L.2
Nielsen, R.3
-
5
-
-
70349653632
-
Genetic discontinuity between local hunter-gatherers and central Europe's first farmers
-
Bramanti B, Thomas MG, Haak W, Unterlaender M, Jores P, et al. 2009. Genetic discontinuity between local hunter-gatherers and central Europe's first farmers. Science 326:137-40
-
(2009)
Science
, vol.326
, pp. 137-140
-
-
Bramanti, B.1
Thomas, M.G.2
Haak, W.3
Unterlaender, M.4
Jores, P.5
-
6
-
-
67650831473
-
Targeted retrieval and analysis of five Neandertal mtDNA genomes
-
Briggs AW, Good JM, Green RE, Krause J, Maricic T, et al. 2009. Targeted retrieval and analysis of five Neandertal mtDNA genomes. Science 325:318-21
-
(2009)
Science
, vol.325
, pp. 318-321
-
-
Briggs, A.W.1
Good, J.M.2
Green, R.E.3
Krause, J.4
Maricic, T.5
-
7
-
-
80055111869
-
Primer extension capture: Targeted sequence retrieval from heavily degraded DNA sources
-
Briggs AW, Good JM, Green RE, Krause J, Maricic T, et al. 2009. Primer extension capture: targeted sequence retrieval from heavily degraded DNA sources. J. Visualized Exp. 31:e1573
-
(2009)
J. Visualized Exp.
, vol.31
-
-
Briggs, A.W.1
Good, J.M.2
Green, R.E.3
Krause, J.4
Maricic, T.5
-
8
-
-
34848827224
-
Patterns of damage in genomic DNA sequences from a Neandertal
-
Briggs AW, Stenzel U, Johnson PL, Green RE, Kelso J, et al. 2007. Patterns of damage in genomic DNA sequences from a Neandertal. Proc. Natl. Acad. Sci. USA 104:14616-21
-
(2007)
Proc. Natl. Acad. Sci. USA
, vol.104
, pp. 14616-14621
-
-
Briggs, A.W.1
Stenzel, U.2
Johnson, P.L.3
Green, R.E.4
Kelso, J.5
-
9
-
-
34247246180
-
Absence of the lactase-persistenceassociated allele in early Neolithic Europeans
-
Burger J, Kirchner M, Bramanti B, Haak W, Thomas MG. 2007. Absence of the lactase-persistenceassociated allele in early Neolithic Europeans. Proc. Natl. Acad. Sci. USA 104:3736-41
-
(2007)
Proc. Natl. Acad. Sci. USA
, vol.104
, pp. 3736-3741
-
-
Burger, J.1
Kirchner, M.2
Bramanti, B.3
Haak, W.4
Thomas, M.G.5
-
10
-
-
29144455851
-
Ancient DNA reveals Holocene loss of genetic diversity in a South American rodent
-
Chan YL, Lacey EA, Pearson OP, Hadly EA. 2005. Ancient DNA reveals Holocene loss of genetic diversity in a South American rodent. Biol. Lett. 1:423-26
-
(2005)
Biol. Lett.
, vol.1
, pp. 423-426
-
-
Chan, Y.L.1
Lacey, E.A.2
Pearson, O.P.3
Hadly, E.A.4
-
11
-
-
0035130163
-
Genomic divergences between humans and other hominoids and the effective population size of the common ancestor of humans and chimpanzees
-
Chen FC, Li WH. 2001. Genomic divergences between humans and other hominoids and the effective population size of the common ancestor of humans and chimpanzees. Am. J. Hum. Genet. 68:444-56
-
(2001)
Am. J. Hum. Genet.
, vol.68
, pp. 444-456
-
-
Chen, F.C.1
Li, W.H.2
-
12
-
-
35048822012
-
The joint allele-frequency spectrum in closely related species
-
Chen H, Green RE, Pääbo S, Slatkin M. 2007. The joint allele-frequency spectrum in closely related species. Genetics 177:387-98
-
(2007)
Genetics
, vol.177
, pp. 387-398
-
-
Chen, H.1
Green, R.E.2
Pääbo, S.3
Slatkin, M.4
-
14
-
-
0001633495
-
Genetic restriction of HIV-1 infection and progression to AIDS by a deletion allele of the CKR5 structural gene
-
Dean M, Carrington M, Winkler C, Huttley GA, SmithMW, et al. 1996. Genetic restriction of HIV-1 infection and progression to AIDS by a deletion allele of the CKR5 structural gene. Science 273:1856-62
-
(1996)
Science
, vol.273
, pp. 1856-1862
-
-
Dean, M.1
Carrington, M.2
Winkler, C.3
Huttley, G.A.4
Smith, M.W.5
-
15
-
-
17744381574
-
Bayesian coalescent inference of past population dynamics from molecular sequences
-
Drummond AJ, RambautA, Shapiro B, Pybus OG. 2005. Bayesian coalescent inference of past population dynamics from molecular sequences. Mol. Biol. Evol. 22:1185-92
-
(2005)
Mol. Biol. Evol.
, vol.22
, pp. 1185-1192
-
-
Drummond, A.J.1
Rambaut, A.2
Shapiro, B.3
Pybus, O.G.4
-
16
-
-
34447300408
-
MitochondrialDNAanalysis shows a Near EasternNeolithic origin for domestic cattle and no indication of domestication of European aurochs
-
Edwards CJ, Bollongino R, Scheu A, Chamberlain A, Tresset A, et al. 2007. MitochondrialDNAanalysis shows a Near EasternNeolithic origin for domestic cattle and no indication of domestication of European aurochs. Proc. R. Soc. B. 274:1377-85
-
(2007)
Proc. R. Soc. B.
, vol.274
, pp. 1377-1385
-
-
Edwards, C.J.1
Bollongino, R.2
Scheu, A.3
Chamberlain, A.4
Tresset, A.5
-
17
-
-
0037158715
-
Molecular evolution of FOXP2, a gene involved in speech and language
-
Enard W, Przeworski M, Fisher SE, Lai CSL, Wiebe V, et al. 2002. Molecular evolution of FOXP2, a gene involved in speech and language. Nature 418:869-72
-
(2002)
Nature
, vol.418
, pp. 869-872
-
-
Enard, W.1
Przeworski, M.2
Fisher, S.E.3
Lai, C.S.L.4
Wiebe, V.5
-
18
-
-
24644507039
-
Microcephalin, a gene regulating brain size, continues to evolve adaptively in humans
-
Evans PD, Gilbert SL, Mekel-Bobrov N, Vallender EJ, Anderson JR, et al. 2005. Microcephalin, a gene regulating brain size, continues to evolve adaptively in humans. Science 309:1717-20
-
(2005)
Science
, vol.309
, pp. 1717-1720
-
-
Evans, P.D.1
Gilbert, S.L.2
Mekel-Bobrov, N.3
Vallender, E.J.4
Anderson, J.R.5
-
19
-
-
79851488815
-
Diachronic investigations of mitochondrial and Y-chromosomal genetic markers in pre-Columbian Andean highlanders from south Peru
-
Fehren-Schmitz L, Warnberg O, ReindelM, SeidenbergV, Tomasto-Cagigao E, et al. 2011. Diachronic investigations of mitochondrial and Y-chromosomal genetic markers in pre-Columbian Andean highlanders from south Peru. Ann. Hum. Genet. 75:266-83
-
(2011)
Ann. Hum. Genet.
, vol.75
, pp. 266-283
-
-
Fehren-Schmitz, L.1
Warnberg, O.2
Reindel, M.3
Seidenberg, V.4
Tomasto-Cagigao, E.5
-
20
-
-
71049171303
-
Composite likelihood estimation of demographic parameters
-
Garrigan D. 2009. Composite likelihood estimation of demographic parameters. BMC Genet. 10:72
-
(2009)
BMC Genet.
, vol.10
, pp. 72
-
-
Garrigan, D.1
-
21
-
-
25444460109
-
Deep haplotype divergence and long-range linkage disequilibrium at xp21.1 provide evidence that humans descend from a structured ancestral population
-
Garrigan D, Mobasher Z, Kingan SB, Wilder JA, Hammer MF. 2005. Deep haplotype divergence and long-range linkage disequilibrium at xp21.1 provide evidence that humans descend from a structured ancestral population. Genetics 170:1849-56
-
(2005)
Genetics
, vol.170
, pp. 1849-1856
-
-
Garrigan, D.1
Mobasher, Z.2
Kingan, S.B.3
Wilder, J.A.4
Hammer, M.F.5
-
22
-
-
12344253123
-
Evidence for archaic Asian ancestry on the human X chromosome
-
Garrigan D, Mobasher Z, Severson T, Wilder JA, Hammer MF. 2005. Evidence for archaic Asian ancestry on the human X chromosome. Mol. Biol. Evol. 22:189-92
-
(2005)
Mol. Biol. Evol.
, vol.22
, pp. 189-192
-
-
Garrigan, D.1
Mobasher, Z.2
Severson, T.3
Wilder, J.A.4
Hammer, M.F.5
-
23
-
-
0018784753
-
Are evolutionary rates really variable? J
-
Gillespie JH, Langley CH. 1979. Are evolutionary rates really variable? J. Mol. Evol. 13:27-34
-
(1979)
Mol. Evol.
, vol.13
, pp. 27-34
-
-
Gillespie, J.H.1
Langley, C.H.2
-
24
-
-
77952136530
-
A draft sequence of the Neandertal genome
-
Green RE, Krause J, Briggs AW, Maricic T, Stenzel U, et al. 2010. A draft sequence of the Neandertal genome. Science 328:710-22
-
(2010)
Science
, vol.328
, pp. 710-722
-
-
Green, R.E.1
Krause, J.2
Briggs, A.W.3
Maricic, T.4
Stenzel, U.5
-
25
-
-
33751077282
-
Analysis of one million base pairs of Neanderthal DNA
-
Green RE, Krause J, Ptak SE, Briggs AW, Ronan MT, et al. 2006. Analysis of one million base pairs of Neanderthal DNA. Nature 444:330-36
-
(2006)
Nature
, vol.444
, pp. 330-336
-
-
Green, R.E.1
Krause, J.2
Ptak, S.E.3
Briggs, A.W.4
Ronan, M.T.5
-
26
-
-
80053386624
-
Bayesian inference of ancient human demography from individual genome sequences
-
Gronau I, Hubisz MJ, Gulko B, Danko CG, Siepel A. 2011. Bayesian inference of ancient human demography from individual genome sequences. Nat. Genet. 43:1031-34
-
(2011)
Nat. Genet.
, vol.43
, pp. 1031-1034
-
-
Gronau, I.1
Hubisz, M.J.2
Gulko, B.3
Danko, C.G.4
Siepel, A.5
-
27
-
-
73449149044
-
Inferring the joint demographic history of multiple populations from multidimensional SNP frequency data
-
Gutenkunst RN, Hernandez RD, Williamson SH, Bustamante CD. 2009. Inferring the joint demographic history of multiple populations from multidimensional SNP frequency data. PLoS Genet. 5:e1000695
-
(2009)
PLoS Genet.
, vol.5
-
-
Gutenkunst, R.N.1
Hernandez, R.D.2
Williamson, S.H.3
Bustamante, C.D.4
-
28
-
-
78649929790
-
Ancient DNA from European early Neolithic farmers reveals their Near Eastern affinities
-
Haak W, Balanovsky O, Sanchez JJ, Koshel S, Zaporozhchenko V, et al. 2010. Ancient DNA from European early Neolithic farmers reveals their Near Eastern affinities. PLoS Biol. 8:e1000536
-
(2010)
PLoS Biol.
, vol.8
-
-
Haak, W.1
Balanovsky, O.2
Sanchez, J.J.3
Koshel, S.4
Zaporozhchenko, V.5
-
29
-
-
80053089069
-
Genetic evidence for archaic admixture in Africa
-
Hammer MF, Woerner AE, Mendez FL, Watkins JC, Wall JD. 2011. Genetic evidence for archaic admixture in Africa. Proc. Natl. Acad. Sci. USA 108:15123-28
-
(2011)
Proc. Natl. Acad. Sci. USA
, vol.108
, pp. 15123-15128
-
-
Hammer, M.F.1
Woerner, A.E.2
Mendez, F.L.3
Watkins, J.C.4
Wall, J.D.5
-
30
-
-
77952294620
-
Isolation with migration models for more than two populations
-
Hey J. 2010. Isolation with migration models for more than two populations. Mol. Biol. Evol. 27:905-20
-
(2010)
Mol. Biol. Evol.
, vol.27
, pp. 905-920
-
-
Hey, J.1
-
31
-
-
3142714474
-
Multilocus methods for estimating population sizes, migration rates and divergence time, with applications to the divergence of Drosophila pseudoobscura and D
-
Hey J, Nielsen R. 2004. Multilocus methods for estimating population sizes, migration rates and divergence time, with applications to the divergence of Drosophila pseudoobscura and D. persimilis. Genetics 167:747-60
-
(2004)
Persimilis. Genetics
, vol.167
, pp. 747-760
-
-
Hey, J.1
Nielsen, R.2
-
32
-
-
33847253975
-
Integration within the Felsenstein equation for improved Markov chain Monte Carlo methods in population genetics
-
Hey J, Nielsen R. 2007. Integration within the Felsenstein equation for improved Markov chain Monte Carlo methods in population genetics. Proc. Natl. Acad. Sci. USA 104:2785-90
-
(2007)
Proc. Natl. Acad. Sci. USA
, vol.104
, pp. 2785-2790
-
-
Hey, J.1
Nielsen, R.2
-
33
-
-
33847253862
-
Genomic relationships and speciation times of human, chimpanzee, and gorilla inferred from a coalescent hidden Markov model
-
Hobolth A, Christensen OF, Mailund T, Schierup MH. 2007. Genomic relationships and speciation times of human, chimpanzee, and gorilla inferred from a coalescent hidden Markov model. PLoS Genet. 3:e7
-
(2007)
PLoS Genet.
, vol.3
-
-
Hobolth, A.1
Christensen, O.F.2
Mailund, T.3
Schierup, M.H.4
-
34
-
-
0020744702
-
Properties of a neutral allele model with intragenic recombination
-
Hudson RR. 1983. Properties of a neutral allele model with intragenic recombination. Theor. Popul. Biol. 23:183-201
-
(1983)
Theor. Popul. Biol.
, vol.23
, pp. 183-201
-
-
Hudson, R.R.1
-
35
-
-
0026747106
-
Gene trees, species trees and the segregation of ancestral alleles
-
Hudson RR. 1992. Gene trees, species trees and the segregation of ancestral alleles. Genetics 131:509-13
-
(1992)
Genetics
, vol.131
, pp. 509-513
-
-
Hudson, R.R.1
-
36
-
-
21344467949
-
Detection of the CCR5-32 HIV resistance gene in Bronze Age skeletons
-
Hummel S, Schmidt D, Kremeyer B, Herrmann B, Oppermann M. 2005. Detection of the CCR5-32 HIV resistance gene in Bronze Age skeletons. Genes Immun. 6:371-74
-
(2005)
Genes Immun.
, vol.6
, pp. 371-374
-
-
Hummel, S.1
Schmidt, D.2
Kremeyer, B.3
Herrmann, B.4
Oppermann, M.5
-
37
-
-
79957538967
-
Genotype frequencies of the ABCC11 gene in 2000-3000-year-old human bones from the Epi-Jomon and Jomon sites in Hokkaido, Japan
-
Kazuta H, Sato T, Dodo Y, Matsumura H, Amano T, et al. 2011. Genotype frequencies of the ABCC11 gene in 2000-3000-year-old human bones from the Epi-Jomon and Jomon sites in Hokkaido, Japan. Anthropol. Sci. 119:81-86
-
(2011)
Anthropol. Sci.
, vol.119
, pp. 81-86
-
-
Kazuta, H.1
Sato, T.2
Dodo, Y.3
Matsumura, H.4
Amano, T.5
-
38
-
-
77950820147
-
The completemitochondrialDNAgenome of an unknown hominin from southern Siberia
-
Krause J, Fu Q, Good JM, Viola B, Shunkov MV, et al. 2010. The completemitochondrialDNAgenome of an unknown hominin from southern Siberia. Nature 464:894-97
-
(2010)
Nature
, vol.464
, pp. 894-897
-
-
Krause, J.1
Fu, Q.2
Good, J.M.3
Viola, B.4
Shunkov, M.V.5
-
39
-
-
35548955882
-
The derived FOXP2 variant of modern humans was shared with Neandertals
-
Krause J, Lalueza-Fox C, Orlando L, Enard W, Green RE, et al. 2007. The derived FOXP2 variant of modern humans was shared with Neandertals. Curr. Biol. 17:1908-12
-
(2007)
Curr. Biol.
, vol.17
, pp. 1908-1912
-
-
Krause, J.1
Lalueza-Fox, C.2
Orlando, L.3
Enard, W.4
Green, R.E.5
-
40
-
-
50049087042
-
Mitochondrial genomes reveal an explosive radiation of extinct and extant bears near theMiocene-Pliocene boundary
-
Krause J, Unger T, Nocon A, Malaspinas A-S, Kolokotronis S-O, et al. 2008. Mitochondrial genomes reveal an explosive radiation of extinct and extant bears near theMiocene-Pliocene boundary. BMC Evol. Biol. 8:220
-
(2008)
BMC Evol. Biol.
, vol.8
, pp. 220
-
-
Krause, J.1
Unger, T.2
Nocon, A.3
Malaspinas, A.-S.4
Kolokotronis, S.-O.5
-
41
-
-
0033772161
-
A view of Neandertal genetic diversity
-
Krings M, Capelli C, Tschentscher F, Geisert H, Meyer S, et al. 2000. A view of Neandertal genetic diversity. Nat. Genet. 26:144-46
-
(2000)
Nat. Genet.
, vol.26
, pp. 144-146
-
-
Krings, M.1
Capelli, C.2
Tschentscher, F.3
Geisert, H.4
Meyer, S.5
-
42
-
-
0031470484
-
NeandertalDNAsequences and the origin of modern humans
-
Krings M, Stone A, Schmitz RW, KrainitzkiH, Stoneking M, Pääbo S. 1997. NeandertalDNAsequences and the origin of modern humans. Cell 90:19-30
-
(1997)
Cell
, vol.90
, pp. 19-30
-
-
Krings, M.1
Stone, A.2
Schmitz, R.W.3
Krainitzki, H.4
Stoneking, M.5
Pääbo, S.6
-
43
-
-
33947499360
-
A preliminary analysis of the DNA and diet of the extinct Beothuk: A systematic approach to ancient human DNA
-
Kuch M, Grocke DR, Knyf MC, Gilbert MTP, Younghusband B, et al. 2007. A preliminary analysis of the DNA and diet of the extinct Beothuk: a systematic approach to ancient human DNA. Am. J. Phys. Anthropol. 132:594-604
-
(2007)
Am. J. Phys. Anthropol.
, vol.132
, pp. 594-604
-
-
Kuch, M.1
Grocke, D.R.2
Knyf, M.C.3
Gilbert, M.T.P.4
Younghusband, B.5
-
44
-
-
0035807360
-
Aforkhead-domain gene is mutated in a severe speech and language disorder
-
LaiCSL, Fisher SE, Hurst JA, Vargha-Khadem F, Monaco AP. 2001.Aforkhead-domain gene is mutated in a severe speech and language disorder. Nature 413:519-23
-
(2001)
Nature
, vol.413
, pp. 519-523
-
-
Lai, C.S.L.1
Fisher, S.E.2
Hurst, J.A.3
Vargha-Khadem, F.4
Monaco, A.P.5
-
45
-
-
77956515290
-
The microcephalin ancestral allele in a Neanderthal individual
-
Lari M, Rizzi E, Milani L, Corti G, Balsamo C, et al. 2010. The microcephalin ancestral allele in a Neanderthal individual. PLoS ONE 5:1-6
-
(2010)
PLoS ONE
, vol.5
, pp. 1-6
-
-
Lari, M.1
Rizzi, E.2
Milani, L.3
Corti, G.4
Balsamo, C.5
-
46
-
-
34848916115
-
Ancient DNA, pig domestication, and the spread of the Neolithic into Europe
-
Larson G, Albarella U, Dobney K, Rowley-Conwy P, Schibler J, et al. 2007. Ancient DNA, pig domestication, and the spread of the Neolithic into Europe. Proc. Natl. Acad. Sci. USA 104:15276-81
-
(2007)
Proc. Natl. Acad. Sci. USA
, vol.104
, pp. 15276-15281
-
-
Larson, G.1
Albarella, U.2
Dobney, K.3
Rowley-Conwy, P.4
Schibler, J.5
-
47
-
-
79960914105
-
Inference of human population history from individual whole-genome sequences
-
Li H, Durbin R. 2011. Inference of human population history from individual whole-genome sequences. Nature 475:493-96
-
(2011)
Nature
, vol.475
, pp. 493-496
-
-
Li, H.1
Durbin, R.2
-
48
-
-
0033178244
-
Paleo-demography of the Drosophila melanogaster subgroup: Application of the maximum likelihood method
-
Li YJ, Satta Y, Takahata N. 1999. Paleo-demography of the Drosophila melanogaster subgroup: application of the maximum likelihood method. Genes Genet. Syst. 74:117-27
-
(1999)
Genes Genet. Syst.
, vol.74
, pp. 117-127
-
-
Li, Y.J.1
Satta, Y.2
Takahata, N.3
-
49
-
-
77950400446
-
Complete mitochondrial genome of a Pleistocene jawbone unveils the origin of polar bear
-
Lindqvist C, Schuster SC, Sun Y, Talbot SL, Qi J, et al. 2010. Complete mitochondrial genome of a Pleistocene jawbone unveils the origin of polar bear. Proc. Natl. Acad. Sci. USA 107:5053-57
-
(2010)
Proc. Natl. Acad. Sci. USA
, vol.107
, pp. 5053-5057
-
-
Lindqvist, C.1
Schuster, S.C.2
Sun, Y.3
Talbot, S.L.4
Qi, J.5
-
50
-
-
80052418885
-
Discovery of lost diversity of paternal horse lineages using ancient DNA
-
Lippold S, Knapp M, Kuznetsova T, Leonard JA, Benecke N, et al. 2011. Discovery of lost diversity of paternal horse lineages using ancient DNA. Nat. Commun. 2:450
-
(2011)
Nat. Commun.
, vol.2
, pp. 450
-
-
Lippold, S.1
Knapp, M.2
Kuznetsova, T.3
Leonard, J.A.4
Benecke, N.5
-
51
-
-
79251553493
-
Comparative and demographic analysis of orangutan genomes
-
Locke DP, Hillier LW, Warren WC, Worley KC, Nazareth LV, et al. 2011. Comparative and demographic analysis of orangutan genomes. Nature 469:529-33
-
(2011)
Nature
, vol.469
, pp. 529-533
-
-
Locke, D.P.1
Hillier, L.W.2
Warren, W.C.3
Worley, K.C.4
Nazareth, L.V.5
-
52
-
-
65449148743
-
Coat color variation at the beginning of horse domestication
-
Ludwig A, Pruvost M, Reissmann M, Benecke N, Brockmann GA, et al. 2009. Coat color variation at the beginning of horse domestication. Science 324:485
-
(2009)
Science
, vol.324
, pp. 485
-
-
Ludwig, A.1
Pruvost, M.2
Reissmann, M.3
Benecke, N.4
Brockmann, G.A.5
-
53
-
-
79953744766
-
Estimating divergence time and ancestral effective population size of Bornean and Sumatran orangutan subspecies using a coalescent hidden Markov model
-
Mailund T, Dutheil JY, Hobolth A, Lunter G, Schierup MH. 2011. Estimating divergence time and ancestral effective population size of Bornean and Sumatran orangutan subspecies using a coalescent hidden Markov model. PLoS Genet. 7:e1001319
-
(2011)
PLoS Genet.
, vol.7
-
-
Mailund, T.1
Dutheil, J.Y.2
Hobolth, A.3
Lunter, G.4
Schierup, M.H.5
-
56
-
-
56749119854
-
Sequencing the nuclear genome of the extinct woolly mammoth
-
Miller W, Drautz DI, Ratan A, Pusey B, Qi J, et al. 2008. Sequencing the nuclear genome of the extinct woolly mammoth. Nature 456:387-92
-
(2008)
Nature
, vol.456
, pp. 387-392
-
-
Miller, W.1
Drautz, D.I.2
Ratan, A.3
Pusey, B.4
Qi, J.5
-
57
-
-
79956215804
-
Comparison of lactase persistence polymorphism in ancient and present-day Hungarian populations
-
Nagy D, Toemoery G, Csanyi B, Bogacsi-Szabo E, Czibula A, et al. 2011. Comparison of lactase persistence polymorphism in ancient and present-day Hungarian populations. Am. J. Phys. Anthropol. 145:262- 69
-
(2011)
Am. J. Phys. Anthropol.
, vol.145
, pp. 262-269
-
-
Nagy, D.1
Toemoery, G.2
Csanyi, B.3
Bogacsi-Szabo, E.4
Czibula, A.5
-
59
-
-
0034967295
-
Distinguishing migration from isolation: A Markov chain Monte Carlo approach
-
Nielsen R, Wakeley J. 2001. Distinguishing migration from isolation: a Markov chain Monte Carlo approach. Genetics 158:885-96
-
(2001)
Genetics
, vol.158
, pp. 885-896
-
-
Nielsen, R.1
Wakeley, J.2
-
60
-
-
33751073995
-
Sequencing and analysis of Neanderthal genomic DNA
-
Noonan JP, Coop G, Kudaravalli S, Smith D, Krause J, et al. 2006. Sequencing and analysis of Neanderthal genomic DNA. Science 314:1113-18
-
(2006)
Science
, vol.314
, pp. 1113-1118
-
-
Noonan, J.P.1
Coop, G.2
Kudaravalli, S.3
Smith, D.4
Krause, J.5
-
61
-
-
23044494722
-
Genomic sequencing of Pleistocene cave bears
-
Noonan JP, Hofreiter M, SmithD, Priest JR, RohlandN, et al. 2005. Genomic sequencing of Pleistocene cave bears. Science 309:597-99
-
(2005)
Science
, vol.309
, pp. 597-599
-
-
Noonan, J.P.1
Hofreiter, M.2
Smith, D.3
Priest, J.R.4
Rohland, N.5
-
62
-
-
0032231870
-
On the probability of Neanderthal ancestry
-
Nordborg M. 1998. On the probability of Neanderthal ancestry. Am. J. Hum. Genet. 63:1237-40
-
(1998)
Am. J. Hum. Genet.
, vol.63
, pp. 1237-1240
-
-
Nordborg, M.1
-
63
-
-
0036728850
-
Contribution of homoplasy and of ancestral polymorphism to the evolution of genes in anthropoid primates
-
O'hUigin C, Satta Y, Takahata N, Klein J. 2002. Contribution of homoplasy and of ancestral polymorphism to the evolution of genes in anthropoid primates. Mol. Biol. Evol. 19:1501-13
-
(2002)
Mol. Biol. Evol.
, vol.19
, pp. 1501-1513
-
-
O'Huigin, C.1
Satta, Y.2
Takahata, N.3
Klein, J.4
-
64
-
-
19944416873
-
Genetic analyses from ancient DNA
-
Pääbo S, Poinar H, Serre D, Jaenicke-Despres V, Hebler J, et al. 2004. Genetic analyses from ancient DNA. Annu. Rev. Genet. 38:645-79
-
(2004)
Annu. Rev. Genet.
, vol.38
, pp. 645-679
-
-
Pääbo, S.1
Poinar, H.2
Serre, D.3
Jaenicke-Despres, V.4
Hebler, J.5
-
65
-
-
66149116064
-
Inferring the demographic history of African farmers and pygmy hunter-gatherers using a multilocus resequencing data set
-
Patin E, Laval G, Barreiro LB, Salas A, Semino O, et al. 2009. Inferring the demographic history of African farmers and pygmy hunter-gatherers using a multilocus resequencing data set. PLoS Genet. 5:e1000448
-
(2009)
PLoS Genet.
, vol.5
-
-
Patin, E.1
Laval, G.2
Barreiro, L.B.3
Salas, A.4
Semino, O.5
-
66
-
-
33745591114
-
Genetic evidence for complex speciation of humans and chimpanzees
-
Patterson N, Richter DJ, Gnerre S, Lander ES, Reich D. 2006. Genetic evidence for complex speciation of humans and chimpanzees. Nature 441:1103-8
-
(2006)
Nature
, vol.441
, pp. 1103-1108
-
-
Patterson, N.1
Richter, D.J.2
Gnerre, S.3
Lander, E.S.4
Reich, D.5
-
67
-
-
77950851159
-
Multilocus genotypes from Charles Darwin's finches: Biodiversity lost since the voyage of the Beagle
-
Petren K, Grant PR, Grant BR, Clack AA, Lescano NV. 2010. Multilocus genotypes from Charles Darwin's finches: biodiversity lost since the voyage of the Beagle. Philos. Trans. R. Soc. Lond. B 365:1009- 18
-
(2010)
Philos. Trans. R. Soc. Lond. B
, vol.365
, pp. 1009-1018
-
-
Petren, K.1
Grant, P.R.2
Grant, B.R.3
Clack, A.A.4
Lescano, N.V.5
-
68
-
-
33746585377
-
Possible ancestral structure in human populations
-
Plagnol V, Wall JD. 2006. Possible ancestral structure in human populations. PLoS Genet. 2:e105
-
(2006)
PLoS Genet.
, vol.2
-
-
Plagnol, V.1
Wall, J.D.2
-
69
-
-
31144442151
-
Metagenomics to paleogenomics: Large-scale sequencing of mammoth DNA
-
Poinar HN, Schwarz C, Qi J, Shapiro B, MacPhee RDE, et al. 2006. Metagenomics to paleogenomics: large-scale sequencing of mammoth DNA. Science 311:392-94
-
(2006)
Science
, vol.311
, pp. 392-394
-
-
Poinar, H.N.1
Schwarz, C.2
Qi, J.3
Shapiro, B.4
MacPhee, R.D.E.5
-
70
-
-
69749102659
-
Doubts about complex speciation between humans and chimpanzees
-
Presgraves DC, Yi SV. 2009. Doubts about complex speciation between humans and chimpanzees. Trends Ecol. Evol. 24:533-40
-
(2009)
Trends Ecol. Evol.
, vol.24
, pp. 533-540
-
-
Presgraves, D.C.1
Yi, S.V.2
-
71
-
-
77956269206
-
Influence of climate warming on Arctic mammals? New insights from ancient DNA studies of the collared lemming Dicrostonyx torquatus
-
Prost S, Smirnov N, Fedorov VB, Sommer RS, Stiller M, et al. 2010. Influence of climate warming on Arctic mammals? New insights from ancient DNA studies of the collared lemming Dicrostonyx torquatus. PLoS ONE 5:e10447
-
(2010)
PLoS ONE
, vol.5
-
-
Prost, S.1
Smirnov, N.2
Fedorov, V.B.3
Sommer, R.S.4
Stiller, M.5
-
72
-
-
58449113893
-
Accommodating the effect of ancientDNAdamage on inferences of demographic histories
-
Rambaut A, Ho SY, Drummond AJ, Shapiro B. 2009. Accommodating the effect of ancientDNAdamage on inferences of demographic histories. Mol. Biol. Evol. 26:245-48
-
(2009)
Mol. Biol. Evol.
, vol.26
, pp. 245-248
-
-
Rambaut, A.1
Ho, S.Y.2
Drummond, A.J.3
Shapiro, B.4
-
73
-
-
0041817551
-
Bayes estimation of species divergence times and ancestral population sizes using DNA sequences from multiple loci
-
Rannala B, Yang Z. 2003. Bayes estimation of species divergence times and ancestral population sizes using DNA sequences from multiple loci. Genetics 164:1645-56
-
(2003)
Genetics
, vol.164
, pp. 1645-1656
-
-
Rannala, B.1
Yang, Z.2
-
74
-
-
80053581951
-
An aboriginal Australian genome reveals separate human dispersals into Asia
-
Rasmussen M, Guo X, Wang Y, Lohmueller KE, Rasmussen S, et al. 2011. An aboriginal Australian genome reveals separate human dispersals into Asia. Science 334:94-98
-
(2011)
Science
, vol.334
, pp. 94-98
-
-
Rasmussen, M.1
Guo, X.2
Wang, Y.3
Lohmueller, K.E.4
Rasmussen, S.5
-
75
-
-
76749141381
-
Ancient human genome sequence of an extinct Palaeo-Eskimo
-
Rasmussen M, Li Y, Lindgreen S, Pedersen JS, Albrechtsen A, et al. 2010. Ancient human genome sequence of an extinct Palaeo-Eskimo. Nature 463:757-62
-
(2010)
Nature
, vol.463
, pp. 757-762
-
-
Rasmussen, M.1
Li, Y.2
Lindgreen, S.3
Pedersen, J.S.4
Albrechtsen, A.5
-
76
-
-
78650850475
-
Genetic history of an archaic hominin group from Denisova Cave in Siberia
-
Reich D, Green RE, Kircher M, Krause J, Patterson N, et al. 2010. Genetic history of an archaic hominin group from Denisova Cave in Siberia. Nature 468:1053-60
-
(2010)
Nature
, vol.468
, pp. 1053-1060
-
-
Reich, D.1
Green, R.E.2
Kircher, M.3
Krause, J.4
Patterson, N.5
-
77
-
-
80053899093
-
Denisova admixture and the first modern human dispersals into Southeast Asia and Oceania
-
Reich D, Patterson N, Kircher M, Delfin F, Nandineni MR, et al. 2011. Denisova admixture and the first modern human dispersals into Southeast Asia and Oceania. Am. J. Hum. Genet. 89:516-28
-
(2011)
Am. J. Hum. Genet.
, vol.89
, pp. 516-528
-
-
Reich, D.1
Patterson, N.2
Kircher, M.3
Delfin, F.4
Nandineni, M.R.5
-
78
-
-
77950025093
-
Ancient Solomon Islands mtDNA: Assessing Holocene settlement and the impact of European contact
-
Ricaut F-X, ThomasT, Mormina M, CoxMP, Bellatti M, et al. 2010. Ancient Solomon Islands mtDNA: assessing Holocene settlement and the impact of European contact. J. Archaeol. Sci. 37:1161-70
-
(2010)
J. Archaeol. Sci.
, vol.37
, pp. 1161-1170
-
-
Ricaut, F.-X.1
Thomas, T.2
Mormina, M.3
Cox, M.P.4
Bellatti, M.5
-
79
-
-
0031049003
-
Molecular phylogeny of the hominoids: Inferences from multiple independent DNA sequence data sets
-
Ruvolo M. 1997. Molecular phylogeny of the hominoids: inferences from multiple independent DNA sequence data sets. Mol. Biol. Evol. 14:248-65
-
(1997)
Mol. Biol. Evol.
, vol.14
, pp. 248-265
-
-
Ruvolo, M.1
-
80
-
-
27844526221
-
The case for selection at CCR5-32
-
Sabeti PC, Walsh E, Schaffner SF, Varilly P, Fry B, et al. 2005. The case for selection at CCR5-32. PLoS Biol. 3:e378
-
(2005)
PLoS Biol.
, vol.3
-
-
Sabeti, P.C.1
Walsh, E.2
Schaffner, S.F.3
Varilly, P.4
Fry, B.5
-
81
-
-
34548009622
-
Palaeogenetic evidence supports a dual model of Neolithic spreading into Europe
-
Sampietro ML, Lao O, Caramelli D, Lari M, Pou R, et al. 2007. Palaeogenetic evidence supports a dual model of Neolithic spreading into Europe. Proc. Biol. Sci. 274:2161-67
-
(2007)
Proc. Biol. Sci.
, vol.274
, pp. 2161-2167
-
-
Sampietro, M.L.1
Lao, O.2
Caramelli, D.3
Lari, M.4
Pou, R.5
-
82
-
-
80052121079
-
Genetic features of ancient West Siberian people of the Middle Ages, revealed by mitochondrial DNA haplogroup analysis
-
Sato T, Razhev D, Amano T, Masuda R. 2011. Genetic features of ancient West Siberian people of the Middle Ages, revealed by mitochondrial DNA haplogroup analysis. J. Hum. Genet. 56:602-8
-
(2011)
J. Hum. Genet.
, vol.56
, pp. 602-608
-
-
Sato, T.1
Razhev, D.2
Amano, T.3
Masuda, R.4
-
83
-
-
0034031477
-
DNA archives and our nearest relative: The trichotomy problem revisited
-
Satta Y, Klein J, Takahata N. 2000. DNA archives and our nearest relative: the trichotomy problem revisited. Mol. Phylogenet. Evol. 14:259-75
-
(2000)
Mol. Phylogenet. Evol.
, vol.14
, pp. 259-275
-
-
Satta, Y.1
Klein, J.2
Takahata, N.3
-
84
-
-
9444220256
-
Rise and fall of the Beringian steppe bison
-
Shapiro B, Drummond AJ, Rambaut A, Wilson MC, Matheus PE, et al. 2004. Rise and fall of the Beringian steppe bison. Science 306:1561-65
-
(2004)
Science
, vol.306
, pp. 1561-1565
-
-
Shapiro, B.1
Drummond, A.J.2
Rambaut, A.3
Wilson, M.C.4
Matheus, P.E.5
-
85
-
-
0034884532
-
Simulating genealogies of selected alleles in a population of variable size
-
Slatkin M. 2001. Simulating genealogies of selected alleles in a population of variable size. Genet. Res. 78:49-57
-
(2001)
Genet. Res.
, vol.78
, pp. 49-57
-
-
Slatkin, M.1
-
86
-
-
81155162563
-
The relationship of the Mimbres to other southwestern and Mexican populations
-
Snow M, Shafer H, Smith DG. 2011. The relationship of the Mimbres to other southwestern and Mexican populations. J. Archaeol. Sci. 38:3122-33
-
(2011)
J. Archaeol. Sci.
, vol.38
, pp. 3122-3133
-
-
Snow, M.1
Shafer, H.2
Smith, D.G.3
-
87
-
-
17344372255
-
Dating the origin of the CCR5-32 AIDS-resistance allele by the coalescence of haplotypes
-
Stephens JC, Reich DE, Goldstein DB, Shin HD, Smith MW, et al. 1998. Dating the origin of the CCR5-32 AIDS-resistance allele by the coalescence of haplotypes. Am. J. Hum. Genet. 62:1507-15
-
(1998)
Am. J. Hum. Genet.
, vol.62
, pp. 1507-1515
-
-
Stephens, J.C.1
Reich, D.E.2
Goldstein, D.B.3
Shin, H.D.4
Smith, M.W.5
-
88
-
-
0022919117
-
An attempt to estimate the effective size of the ancestral species common to two extant species from which homologous genes are sequenced
-
Takahata N. 1986. An attempt to estimate the effective size of the ancestral species common to two extant species from which homologous genes are sequenced. Genet. Res. 48:187-90
-
(1986)
Genet. Res.
, vol.48
, pp. 187-190
-
-
Takahata, N.1
-
89
-
-
0030895289
-
Evolution of the primate lineage leading to modern humans: Phylogenetic and demographic inferences from DNA sequences
-
Takahata N, Satta Y. 1997. Evolution of the primate lineage leading to modern humans: phylogenetic and demographic inferences from DNA sequences. Proc. Natl. Acad. Sci. USA 94:4811-15
-
(1997)
Proc. Natl. Acad. Sci. USA
, vol.94
, pp. 4811-4815
-
-
Takahata, N.1
Satta, Y.2
-
90
-
-
0013272874
-
Pre-speciation coalescence and the effective size of ancestral populations
-
ed.MSlatkin, MVeuille. Oxford, UK Oxford Univ. Press
-
Takahata N, Satta Y. 2002. Pre-speciation coalescence and the effective size of ancestral populations. In Modern Developments in Theoretical Population Genetics, ed.MSlatkin, MVeuille, pp. 52-71. Oxford, UK: Oxford Univ. Press
-
(2002)
Modern Developments in Theoretical Population Genetics
, pp. 52-71
-
-
Takahata, N.1
Satta, Y.2
-
91
-
-
0029415835
-
Divergence time and population size in the lineage leading tomodern humans
-
Takahata N, Satta Y, Klein J. 1995. Divergence time and population size in the lineage leading tomodern humans. Theor. Popul. Biol. 48:198-221
-
(1995)
Theor. Popul. Biol.
, vol.48
, pp. 198-221
-
-
Takahata, N.1
Satta, Y.2
Klein, J.3
-
92
-
-
0030162288
-
Phylogeography of brown bears (Ursus arctos) of Alaska and paraphyly within the Ursidae
-
Talbot SL, Shields GF. 1996. Phylogeography of brown bears (Ursus arctos) of Alaska and paraphyly within the Ursidae. Mol. Phylogenet. Evol. 5:477-94
-
(1996)
Mol. Phylogenet. Evol.
, vol.5
, pp. 477-494
-
-
Talbot, S.L.1
Shields, G.F.2
-
93
-
-
33644763127
-
Approximate Bayesian inference reveals evidence for a recent, severe bottleneck in a Netherlands population of Drosophila melanogaster
-
Thornton K, Andolfatto P. 2006. Approximate Bayesian inference reveals evidence for a recent, severe bottleneck in a Netherlands population of Drosophila melanogaster. Genetics 172:1607-19
-
(2006)
Genetics
, vol.172
, pp. 1607-1619
-
-
Thornton, K.1
Andolfatto, P.2
-
94
-
-
29444451610
-
Interrogating multiple aspects of variation in a full resequencing data set to infer human population size changes
-
Voight BF, Adams AM, Frisse LA, Qian Y, Hudson RR, Di Rienzo A. 2005. Interrogating multiple aspects of variation in a full resequencing data set to infer human population size changes. Proc. Natl. Acad. Sci. USA 102:18508-13
-
(2005)
Proc. Natl. Acad. Sci. USA
, vol.102
, pp. 18508-18513
-
-
Voight, B.F.1
Adams, A.M.2
Frisse, L.A.3
Qian, Y.4
Hudson, R.R.5
Di Rienzo, A.6
-
95
-
-
40749148589
-
Complex speciation of humans and chimpanzees
-
Wakeley J. 2008. Complex speciation of humans and chimpanzees. Nature 452:E3-4
-
(2008)
Nature
, vol.452
-
-
Wakeley, J.1
-
96
-
-
0034090691
-
Detecting ancient admixture in humans using sequence polymorphism data
-
Wall JD. 2000. Detecting ancient admixture in humans using sequence polymorphism data. Genetics 154:1271-79
-
(2000)
Genetics
, vol.154
, pp. 1271-1279
-
-
Wall, J.D.1
-
97
-
-
0037277564
-
Estimating ancestral population sizes and divergence times
-
Wall JD. 2003. Estimating ancestral population sizes and divergence times. Genetics 163:395-404
-
(2003)
Genetics
, vol.163
, pp. 395-404
-
-
Wall, J.D.1
-
98
-
-
35948953261
-
Inconsistencies in Neanderthal genomic DNA sequences
-
Wall JD, Kim SK. 2007. Inconsistencies in Neanderthal genomic DNA sequences. PLoS Genet. 3:1862- 66
-
(2007)
PLoS Genet.
, vol.3
, pp. 1862-1866
-
-
Wall, J.D.1
Kim, S.K.2
-
99
-
-
67749111629
-
Detecting ancient admixture and estimating demographic parameters in multiple human populations
-
Wall JD, Lohmueller KE, Plagnol V. 2009. Detecting ancient admixture and estimating demographic parameters in multiple human populations. Mol. Biol. Evol. 26:1823-27
-
(2009)
Mol. Biol. Evol.
, vol.26
, pp. 1823-1827
-
-
Wall, J.D.1
Lohmueller, K.E.2
Plagnol, V.3
-
100
-
-
0024498122
-
Ageneralized-approach for estimating effective population-size from temporal changes in allele frequency
-
Waples RS. 1989.Ageneralized-approach for estimating effective population-size from temporal changes in allele frequency. Genetics 121:379-91
-
(1989)
Genetics
, vol.121
, pp. 379-391
-
-
Waples, R.S.1
-
101
-
-
0026031181
-
Inferences of species phylogeny in relation to segregation of ancient polymorphisms
-
Wu CI. 1991. Inferences of species phylogeny in relation to segregation of ancient polymorphisms. Genetics 127:429-35
-
(1991)
Genetics
, vol.127
, pp. 429-435
-
-
Wu, C.I.1
-
102
-
-
0030741747
-
On the estimation of ancestral population sizes of modern humans
-
Yang Z. 1997. On the estimation of ancestral population sizes of modern humans. Genet. Res. 69:111-16
-
(1997)
Genet. Res.
, vol.69
, pp. 111-116
-
-
Yang, Z.1
-
103
-
-
0036961518
-
Likelihood and Bayes estimation of ancestral population sizes in hominoids using data from multiple loci
-
Yang Z. 2002. Likelihood and Bayes estimation of ancestral population sizes in hominoids using data from multiple loci. Genetics 162:1811-23
-
(2002)
Genetics
, vol.162
, pp. 1811-1823
-
-
Yang, Z.1
-
104
-
-
78651511023
-
Ancient DNA evidence supports the contribution of Di-Qiang people to the Han Chinese gene pool
-
Zhao Y-B, Li H-J, Li S-N, Yu C-C, Gao S-Z, et al. 2011. Ancient DNA evidence supports the contribution of Di-Qiang people to the Han Chinese gene pool. Am. J. Phys. Anthropol. 144:258-68
-
(2011)
Am. J. Phys. Anthropol.
, vol.144
, pp. 258-268
-
-
Zhao, Y.-B.1
Li, H.-J.2
Li, S.-N.3
Yu, C.-C.4
Gao, S.-Z.5
|