Proteome analysis of pyloric Ceca: A methodology for fish feed development?

Journal of Agricultural and Food Chemistry

Volumn 60, Issue 34, 2012, Pages 8457-8464

  Wulff, Tune ^a,b   Petersen, Jørgen ^b   Nørrelykke, Mette R ^c   Jessen, Flemming ^a   Nielsen, Henrik H ^a  

^a TECHNICAL UNIVERSITY OF DENMARK   (Denmark)

^b UNIVERSITY OF SOUTHERN DENMARK   (Denmark)

^c AllerAqua AS   (Denmark)

Author keywords

feed utilization; fish feed; Oncorhynchus mykiss; proteomic; pyloric ceca; two dimensional gel electrophoresis

Indexed keywords

FISH FEED; ONCORHYNCHUS MYKISS; PROTEOMIC; PYLORIC CECUM; TWO-DIMENSIONAL GEL ELECTROPHORESIS;

ELECTROPHORESIS; FISH; MASS SPECTROMETRY; TWO DIMENSIONAL;

PROTEINS;

FISH PROTEIN;

ANIMAL; ANIMAL FOOD; ARTICLE; CECUM; GASTROINTESTINAL TRACT; METABOLISM; METHODOLOGY; PHYSIOLOGY; PROTEOMICS; RAINBOW TROUT; TANDEM MASS SPECTROMETRY; TWO DIMENSIONAL GEL ELECTROPHORESIS;

ANIMAL FEED; ANIMALS; CECUM; ELECTROPHORESIS, GEL, TWO-DIMENSIONAL; FISH PROTEINS; GASTROINTESTINAL TRACT; ONCORHYNCHUS MYKISS; PROTEOMICS; TANDEM MASS SPECTROMETRY;

ONCORHYNCHUS MYKISS; SALMONIDAE;

EID: 84865614998     PISSN: 00218561     EISSN: 15205118     Source Type: Journal    
DOI: 10.1021/jf3016943     Document Type: Article

References (43)

1. Kaushik, S. J.; Cravedi, J. P.; Lalles, J. P.; Sumpter, J.; Fauconneau, B.; Laroche, M. Partial or total replacement of fish-meal by soybean protein on growth, protein-utilization, potential estrogenic or antigenic effects, cholesterolemia and flesh quality in rainbow-trout, Oncorhynchus mykiss Aquaculture 1995, 133, 257-274
2. Refstie, S.; Korsoen, O. J.; Storebakken, T.; Baeverfjord, G.; Lein, I.; Roem, A. J. Differing nutritional responses to dietary soybean meal in rainbow trout (Oncorhynchus mykiss) and Atlantic salmon (Salmo salar) Aquaculture 2000, 190, 49-63
3. Thiessen, D. L.; Campbell, G. L.; Adelizi, P. D. Digestibility and growth performance of juvenile rainbow trout (Oncorhynchus mykiss) fed with pea and canola products Aquacult. Nutr. 2003, 9, 67-75
4. Gaylord, T. G.; Barrows, F. T.; Rawles, S. D.; Liu, K.; Bregitzer, P.; Hang, A.; Obert, D. E.; Morris, C. Apparent digestibility of nutrients and energy in extruded diets from cultivars of barley and wheat selected for nutritional quality in rainbow trout Oncorhynchus mykisx Aquaculture Nutr. 2009, 15, 306-312
5. El-Haroun, E. R.; Azevedo, P. A.; Bureau, D. P. High dietary incorporation levels of rendered animal protein ingredients on performance of rainbow trout Oncorhynchus mykiss (Walbaum, 1972) Aquaculture 2009, 290, 269-274
6. Glencross, B.; Evans, D.; Hawkins, W.; Jones, B. Evaluation of dietary inclusion of yellow lupin (Lupinus luteus) kernel meal on the growth, feed utilisation and tissue histology of rainbow trout (Oncorhynchus mykiss) Aquaculture 2004, 235, 411-422
7. Baron, C. P.; Hyldig, G.; Jacobsen, C. Does feed composition affect oxidation of rainbow trout (Oncorhynchus mykiss) during frozen storage? J. Agric. Food Chem. 2009, 57, 4185-4194
8. de Francesco, M.; Parisi, G.; Medale, F.; Lupi, P.; Kaushik, S. J.; Poli, B. M. Effect of long-term feeding with a plant protein mixture based diet on growth and body/fillet quality traits of large rainbow trout (Oncorhynchus mykiss) Aquaculture 2004, 236, 413-429
9. Dimes, L. E.; Haard, N. F.; Dong, F. M.; Rasco, B. A.; Forster, I. P.; Fairgrieve, W. T.; Arndt, R.; Hardy, R. W.; Barrows, F. T.; Higgs, D. A. Estimation of protein digestibility. 2. In-vitro assay of protein in salmonid feeds Comp. Biochem. Physiol. A-Physiol. 1994, 108, 363-370
10. Bassompierre, M.; Børresen, T.; Sandfeld, P.; Rønsholdt, B.; Zimmermann, W.; Mclean, E. An evaluation of open and closed systems for in vitro protein digestion of fish meal Aquacult. Nutr. 1997, 3 (7) 153-159
11. Rungruangsak-Torrissen, K.; Rustad, A.; Sunde, J.; Eiane, S.; Jensen, H.; Opstvedt, J.; Nygard, E.; Samuelsen, T.; Mundheim, H.; Luzzana, U.; Venturini, G. In vitro digestibility based on fish crude enzyme extract for prediction of feed quality in growth trials J. Sci. Food Agric. 2002, 82, 644-654
12. Romarheim, O. H.; Skrede, A.; Penn, M.; Mydland, L. T.; Krogdahl, A.; Storebakken, T. Lipid digestibility, bile drainage and development of morphological intestinal changes in rainbow trout (Oncorhynchus mykiss) fed diets containing defatted soybean meal Aquaculture 2008, 274, 329-338
13. Fountoulaki, E.; Alexis, M. N.; Nengas, I.; Venou, B. Effect of diet composition on nutrient digestibility and digestive enzyme levels of gilthead sea bream (Sparus aurata L.) Aquacult. Res. 2005, 36, 1243-1251
14. Krogdahl, A.; Sundby, A.; Olli, J. J. Atlantic salmon (Salmo salar) and rainbow trout (Oncorhynchus mykiss) digest and metabolize nutrients differently. Effects of water salinity and dietary starch level Aquaculture 2004, 229, 335-360
15. Pavasovic, A.; Anderson, A. J.; Mather, P. B.; Richardson, N. A. Effect of a variety of animal, plant and single cell-based feed ingredients on diet digestibility and digestive enzyme activity in redclaw crayfish, Cherax quadricarinatus (Von Martens 1868) Aquaculture 2007, 272, 564-572
16. Martin, S. A.; Vilhelmsson, O.; Medale, F.; Watt, P.; Kaushik, S.; Houlihan, D. F. Proteomic sensitivity to dietary manipulations in rainbow trout Biochim. Biophys. Acta 2003, 1651, 17-29
17. Kolditz, C. I.; Paboeuf, G.; Borthaire, M.; Esquerre, D.; SanCristobal, M.; Lefevre, F.; Medale, F. Changes induced by dietary energy intake and divergent selection for muscle fat content in rainbow trout (Oncorhynchus mykiss), assessed by transcriptome and proteome analysis of the liver BMC Genomics 2008, 9, 506
18. Rodrigues, P. M.; Silva, T. S.; Dias, J.; Jessen, F. Proteomics in aquaculture: applications and trends. J. Proteomics 2012, http://dx.doi.org/10. 1016/j.bbr.2011.03.031
19. Bligh, E. G.; Dyer, W. J. A rapid method of total lipid extraction and purification Can. J. Biochem. Physiol. 1959, 37, 911-917
20. Lowry, O. H.; Rosebrough, N. J.; Farr, A. L.; Randall, R. J. Protein measurement with the Folin phenol reagent J. Biol. Chem. 1951, 193, 265-275
21. Wulff, T.; Hoffmann, E. K.; Roepstorff, P.; Jessen, F. Comparison of two anoxia models in rainbow trout cells by a 2-DE and MS/MS-based proteome approach Proteomics 2008, 8, 2035-2044
22. Forne, I.; Abian, J.; Cerda, J. Fish proteome analysis: model organisms and non-sequenced species Proteomics 2009, 10, 858-872
23. Rabilloud, T.; Charmont, S. Detection of proteins on two-dimensional electrophoresis gels. In Proteome Research: Two-Dimensional Gel Electrophoresis and Identification Methods; Rabilloud, T., Ed.; Springer-Verlag: Berlin, Germany, 2000; pp 107-126.
24. Jensen, K. N.; Jessen, F.; Jorgensen, B. M. Multivariate data analysis of two-dimensional gel electrophoresis protein patterns from few samples J. Proteome Res. 2008, 7, 1288-1296
25. Martens, H.; Martens, M. Modified Jack-knife estimation of parameter uncertainty in bilinear modelling by partial least squares regression (PLSR) Food Qual. Pref. 2000, 11, 5-16
26. Barrows, F. T.; Gaylord, T. G.; Stone, D. A. J.; Smith, C. E. Effect of protein source and nutrient density on growth efficiency, histology and plasma amino acid concentration of rainbow trout (Oncorhynchus mykiss Walbaum) Aquacult. Res. 2007, 38, 1747-1758
27. Belanger, F.; Blier, P. U.; Dutil, J. D. Digestive capacity and compensatory growth in Atlantic cod (Gadus morhua) Fish Physiol. Biochem. 2002, 26, 121-128
28. Chaiyapechara, S.; Casten, M. T.; Hardy, R. W.; Dong, F. M. Fish performance, fillet characteristics, and health assessment index of rainbow trout (Oncorhynchus mykiss) fed diets containing adequate and high concentrations of lipid and vitamin E Aquaculture 2003, 219, 715-738
29. Furne, M.; Garcia-Gallego, M.; Hidalgo, M. C.; Morales, A. E.; Domezain, A.; Domezain, J.; Sanz, A. Effect of starvation and refeeding on digestive enzyme activities in sturgeon (Acipenser naccarii) and trout (Oncorhynchus mykiss) Comp. Biochem. Physiol. A-Mol. Integr. Physiol. 2008, 149, 420-425
30. Krogdahl, A.; Bakke-McKellep, A. M. Fasting and refeeding cause rapid changes in intestinal tissue mass and digestive enzyme capacities of Atlantic salmon (Salmo salar L.) Comp. Biochem. Physiol. A-Mol. Integr. Physiol. 2005, 141, 450-460
31. Furne, M.; Hidalgo, M. C.; Lopez, A.; Garcia-Gallego, M.; Morales, A. E.; Domezain, A.; Domezaine, J.; Sanz, A. Digestive enzyme activities in Adriatic sturgeon Acipenser naccarii and rainbow trout Oncorhynchus mykiss. A comparative study Aquaculture 2005, 250, 391-398
32. Mambrini, M.; Roem, A. J.; Carvedi, J. P.; Lalles, J. P.; Kaushik, S. J. Effects of replacing fish meal with soy protein concentrate and of dl -methionine supplementation in high-energy, extruded diets on the growth and nutrient utilization of rainbow trout, Oncorhynchus mykiss J. Anim. Sci. 1999, 77, 2990-2999
33. Haard, N. F.; Dimes, L. E.; Arndt, R. E.; Dong, F. M. Estimation of protein digestibility. 4. Digestive proteinases from the pyloric caeca of coho salmon (Oncorhynchus kisutch) fed diets containing soybean meal Comp. Biochem. Physiol. B-Biochem. Mol. Biol. 1996, 115, 533-540
34. Rawlings, N. D.; Barrett, A. J., Evolutionary Families of Metallopeptidases; Academic Press: San Diego, CA, 1995; pp 183-228.
35. Douglas, S. E.; Gallant, J. W.; Bullerwell, C. E. Molecular investigation of aminopeptidase N expression in the winter flounder, Pleuronectes americanus J. Appl. Ichthyol. (Z. Angew. Ichthyol.) 1999, 15, 80-86
36. Eliason, E. J.; Higgs, D. A.; Farrell, A. P. Postprandial gastrointestinal blood flow, oxygen consumption and heart rate in rainbow trout (Oncorhynchus mykiss) Comp. Biochem. Physiol. A-Mol. Integr. Physiol. 2008, 149, 380-388
37. Thorarensen, H.; Farrell, A. P. Postprandial intestinal blood flow, metabolic rates, and exercise in Chinook salmon (Oncorhynchus tshawytscha) Physiol. Biochem. Zool. 2006, 79, 688-694
38. Seth, H.; Sandblom, E.; Axelsson, M. Nutrient-induced gastrointestinal hyperemia and specific dynamic action in rainbow trout (Oncorhynchus mykiss)-importance of proteins and lipids Am. J. Physiol. Regul. Integr. Comp. Physiol. 2009, 296, R345-R352
39. Maillou, J.; Nimmo, I. A. Albumin-like proteins in the serum of rainbow-trout (Salmo gairdneri) Comp. Biochem. Physiol. B-Biochem. Mol. Biol. 1993, 104, 387-393
40. Axelsson, M.; Fritsche, R. Effects of exercise, hypoxia and feeding on the gastrointestinal blood flow in the Atlantic cod Gadus morhua J. Exp. Biol. 1991, 158, 181-198
41. Axelsson, M.; Thorarensen, H.; Nilsson, S.; Farrell, A. P. Gastrointestinal blood flow in the red Irish lord, Hemilepidotus hemilepidotus: long-term effects of feeding and adrenergic control J. Comp. Physiol. B-Biochem. Syst. Environ. Physiol. 2000, 170, 145-152
42. Her, G. M.; Chiang, C. C.; Wu, J. L. Zebrafish intestinal fatty acid binding protein (I-FABP) gene promoter drives gut-specific expression in stable transgenic fish Genesis 2004, 38, 26-31
43. Besnard, P.; Niot, I.; Poirier, H.; Clement, L.; Bernard, A. New insights into the fatty acid-binding protein (FABP) family in the small intestine Mol. Cell. Biochem. 2002, 239, 139-147