메뉴 건너뛰기




Volumn 4, Issue 5, 2012, Pages 658-667

The effect of variation in the effective population size on the rate of adaptive molecular evolution in eukaryotes

Author keywords

Adaptive evolution; Effective population size; Eukaryotes

Indexed keywords

EUKARYOTA;

EID: 84865426303     PISSN: None     EISSN: 17596653     Source Type: Journal    
DOI: 10.1093/gbe/evs027     Document Type: Article
Times cited : (135)

References (73)
  • 1
    • 0029985179 scopus 로고    scopus 로고
    • Molecular evolution between Drosophila melanogaster and D. simulans: Reduced codon bias, faster rates of amino acid substitution, and larger proteins in D. melanogaster
    • Akashi H. 1996. Molecular evolution between Drosophila melanogaster and D. simulans: reduced codon bias, faster rates of amino acid substitution, and larger proteins in D. melanogaster. Genetics 144(3):1297-1307.
    • (1996) Genetics , vol.144 , Issue.3 , pp. 1297-1307
    • Akashi, H.1
  • 2
    • 0030903283 scopus 로고    scopus 로고
    • Natural selection and the frequency distributions of 'silent' DNA polymorphism in Drosophila
    • Akashi H, Schaeffer SW. 1997. Natural selection and the frequency distributions of "silent" DNA polymorphism in Drosophila. Genetics 146(1):295-307. (Pubitemid 27194408)
    • (1997) Genetics , vol.146 , Issue.1 , pp. 295-307
    • Akashi, H.1    Schaeffer, S.W.2
  • 4
    • 79954988547 scopus 로고    scopus 로고
    • Effective population size and the efficacy of selection on the X chromosomes of two closely related Drosophila species
    • Andolfatto P, Wong KM, Bachtrog D. 2011. Effective population size and the efficacy of selection on the X chromosomes of two closely related Drosophila species. Genome Biol Evol. 3:114-128.
    • (2011) Genome Biol Evol , vol.3 , pp. 114-128
    • Andolfatto, P.1    Wong, K.M.2    Bachtrog, D.3
  • 5
    • 0024058618 scopus 로고
    • The rosy region of Drosophila melanogaster and Drosophila simulans. I. Contrasting levels of naturally occurring DNA restriction map variation and divergence
    • Aquadro CF, Lado KM, Noon WA. 1988. The rosy region of Drosophila melanogaster and Drosophila simulans. I. Contrasting levels of naturally occurring DNA restriction map variation and divergence. Genetics 119(4):875-888.
    • (1988) Genetics , vol.119 , Issue.4 , pp. 875-888
    • Aquadro, C.F.1    Lado, K.M.2    Noon, W.A.3
  • 6
    • 13944275268 scopus 로고    scopus 로고
    • Patterns of selection on synonymous and nonsynonymous variants in Drosophila miranda
    • DOI 10.1534/genetics.104.033068
    • Bartolomé C, Maside X, Yi S, Grant AL, Charlesworth B. 2005. Patterns of selection on synonymous and nonsynonymous variants in Drosophila miranda. Genetics 169(3):1495-1507. (Pubitemid 40547459)
    • (2005) Genetics , vol.169 , Issue.3 , pp. 1495-1507
    • Bartolome, C.1    Maside, X.2    Yi, S.3    Grant, A.L.4    Charlesworth, B.5
  • 7
    • 31844440056 scopus 로고    scopus 로고
    • Fast accumulation of nonsynonymous mutations on the female-specific W chromosome in birds
    • DOI 10.1007/s00239-005-0067-6
    • Berlin S, Ellegren H. 2006. Fast accumulation of nonsynonymous mutations on the female-specific W chromosome in birds. J Mol Evol. 62(1):66-72. (Pubitemid 43185419)
    • (2006) Journal of Molecular Evolution , vol.62 , Issue.1 , pp. 66-72
    • Berlin, S.1    Ellegren, H.2
  • 8
    • 0346991738 scopus 로고    scopus 로고
    • The Problem of Counting Sites in the Estimation of the Synonymous and Nonsynonymous Substitution Rates: Implications for the Correlation between the Synonymous Substitution Rate and Codon Usage Bias
    • Bierne N, Eyre-Walker A. 2003. The problem of counting sites in the estimation of the synonymous and nonsynonymous substitution rates: implications for the correlation between the synonymous substitution rate and codon usage bias. Genetics 165(3): 1587-1597. (Pubitemid 38020272)
    • (2003) Genetics , vol.165 , Issue.3 , pp. 1587-1597
    • Bierne, N.1    Eyre-Walker, A.2
  • 9
    • 3042544623 scopus 로고    scopus 로고
    • The genomic rate of adaptive amino acid substitution in Drosophila
    • DOI 10.1093/molbev/msh134
    • Bierne N, Eyre-Walker A. 2004. The genomic rate of adaptive amino acid substitution in Drosophila. Mol Biol Evol. 21(7):1350-1360. (Pubitemid 38823738)
    • (2004) Molecular Biology and Evolution , vol.21 , Issue.7 , pp. 1350-1360
    • Bierne, N.1    Eyre-Walker, A.2
  • 10
    • 44949129000 scopus 로고    scopus 로고
    • Assessing the evolutionary impact of amino acid mutations in the human genome
    • Boyko AR, et al. 2008. Assessing the evolutionary impact of amino acid mutations in the human genome. PLoS Genet. 4(5):e1000083.
    • (2008) PLoS Genet , vol.4 , Issue.5
    • Boyko, A.R.1
  • 13
    • 2442655226 scopus 로고    scopus 로고
    • Similar rates but different modes of sequence evolution in introns and at exonic silent sites in rodents: Evidence for selectively driven codon usage
    • DOI 10.1093/molbev/msh087
    • Chamary JV, Hurst LD. 2004. Similar rates but different modes of sequence evolution in introns and at exonic silent sites in rodents: evidence for selectively driven codon usage. Mol Biol Evol. 21(6): 1014-1023. (Pubitemid 38658209)
    • (2004) Molecular Biology and Evolution , vol.21 , Issue.6 , pp. 1014-1023
    • Chamary, J.-V.1    Hurst, L.D.2
  • 14
    • 31144465926 scopus 로고    scopus 로고
    • Hearing silence: Non-neutral evolution at synonymous sites in mammals
    • DOI 10.1038/nrg1770, PII NRG1770
    • Chamary JV, Parmley JL, Hurst LD. 2006. Hearing silence: non-neutral evolution at synonymous sites in mammals. Nat Rev Genet. 7(2): 98-108. (Pubitemid 43128905)
    • (2006) Nature Reviews Genetics , vol.7 , Issue.2 , pp. 98-108
    • Chamary, J.V.1    Parmley, J.L.2    Hurst, L.D.3
  • 15
    • 33745624539 scopus 로고    scopus 로고
    • The rate of adaptive evolution in enteric bacteria
    • DOI 10.1093/molbev/msk025
    • Charlesworth J, Eyre-Walker A. 2006. The rate of adaptive evolution in enteric bacteria. Mol Biol Evol. 23(7):1348-1356. (Pubitemid 43992336)
    • (2006) Molecular Biology and Evolution , vol.23 , Issue.7 , pp. 1348-1356
    • Charlesworth, J.1    Eyre-Walker, A.2
  • 16
    • 24344500211 scopus 로고    scopus 로고
    • Initial sequence of the chimpanzee genome and comparison with the human genome
    • Chimpanzee Sequencing and Analysis Consortium
    • Chimpanzee Sequencing and Analysis Consortium. 2005. Initial sequence of the chimpanzee genome and comparison with the human genome. Nature 437(7055):69-87.
    • (2005) Nature , vol.437 , Issue.7055 , pp. 69-87
  • 17
    • 47149117454 scopus 로고    scopus 로고
    • Evolution of genes and genomes on the Drosophila phylogeny
    • Drosophila 12 Genomes Consortium, et al.
    • Drosophila 12 Genomes Consortium, et al. 2007. Evolution of genes and genomes on the Drosophila phylogeny. Nature 450(7167): 203-218.
    • (2007) Nature , vol.450 , Issue.7167 , pp. 203-218
  • 18
    • 72649102150 scopus 로고    scopus 로고
    • Distributions of selectively constrained sites and deleterious mutation rates in the hominid and murid genomes
    • Eory L, Halligan DL, Keightley PD. 2010. Distributions of selectively constrained sites and deleterious mutation rates in the hominid and murid genomes. Mol Biol Evol. 27(1):177-192.
    • (2010) Mol Biol Evol , vol.27 , Issue.1 , pp. 177-192
    • Eory, L.1    Halligan, D.L.2    Keightley, P.D.3
  • 19
    • 0036961560 scopus 로고    scopus 로고
    • Changing effective population size and the McDonald-Kreitman test
    • Eyre-Walker A. 2002. Changing effective population size and the McDonald-Kreitman test. Genetics 162(4):2017-2024. (Pubitemid 36114681)
    • (2002) Genetics , vol.162 , Issue.4 , pp. 2017-2024
    • Eyre-Walker, A.1
  • 20
    • 68949202924 scopus 로고    scopus 로고
    • Estimating the rate of adaptive molecular evolution in the presence of slightly deleterious mutations and population size change
    • Eyre-Walker A, Keightley PD. 2009. Estimating the rate of adaptive molecular evolution in the presence of slightly deleterious mutations and population size change. Mol Biol Evol. 26(9):2097-2108.
    • (2009) Mol Biol Evol , vol.26 , Issue.9 , pp. 2097-2108
    • Eyre-Walker, A.1    Keightley, P.D.2
  • 21
    • 33645096818 scopus 로고    scopus 로고
    • Evidence for domesticated and wild populations of Saccharomyces cerevisiae
    • Fay JC, Benavides JA. 2005. Evidence for domesticated and wild populations of Saccharomyces cerevisiae. PLoS Genet. 1(1):66-71.
    • (2005) PLoS Genet , vol.1 , Issue.1 , pp. 66-71
    • Fay, J.C.1    Benavides, J.A.2
  • 22
    • 2542453268 scopus 로고    scopus 로고
    • DNA diversity in Hawaiian endemic plant Schiedea globosa
    • DOI 10.1038/sj.hdy.6800440
    • Filatov DA, Burke S. 2004. DNA diversity in Hawaiian endemic plant Schiedea globosa. Heredity 92(5):452-458. (Pubitemid 38673712)
    • (2004) Heredity , vol.92 , Issue.5 , pp. 452-458
    • Filatov, D.A.1    Burke, S.2
  • 23
    • 23744486255 scopus 로고    scopus 로고
    • The scale of mutational variation in the murid genome
    • DOI 10.1101/gr.3895005
    • Gaffney DJ, Keightley PD. 2005. The scale of mutational variation in the murid genome. Genome Res. 15(8):1086-1094. (Pubitemid 41126864)
    • (2005) Genome Research , vol.15 , Issue.8 , pp. 1086-1094
    • Gaffney, D.J.1    Keightley, P.D.2
  • 24
    • 77954969511 scopus 로고    scopus 로고
    • Genome wide analyses reveal little evidence for adaptive evolution in many plant species
    • Gossmann TI, et al. 2010. Genome wide analyses reveal little evidence for adaptive evolution in many plant species. Mol Biol Evol. 27(8): 1822-1832.
    • (2010) Mol Biol Evol , vol.27 , Issue.8 , pp. 1822-1832
    • Gossmann, T.I.1
  • 26
    • 78751612067 scopus 로고    scopus 로고
    • Estimating the parameters of selection on nonsynonymous mutations in Drosophila pseudoobscura and D. miranda
    • Haddrill PR, Loewe L, Charlesworth B. 2010. Estimating the parameters of selection on nonsynonymous mutations in Drosophila pseudoobscura and D. miranda. Genetics 185(4):1381-1396.
    • (2010) Genetics , vol.185 , Issue.4 , pp. 1381-1396
    • Haddrill, P.R.1    Loewe, L.2    Charlesworth, B.3
  • 27
    • 79955426758 scopus 로고    scopus 로고
    • Determinants of synonymous and nonsynonymous variability in three species of Drosophila
    • Haddrill PR, Zeng K, Charlesworth B. 2011. Determinants of synonymous and nonsynonymous variability in three species of Drosophila. Mol Biol Evol. 28(5):1731-1743.
    • (2011) Mol Biol Evol , vol.28 , Issue.5 , pp. 1731-1743
    • Haddrill, P.R.1    Zeng, K.2    Charlesworth, B.3
  • 29
    • 0038015586 scopus 로고    scopus 로고
    • A neutral explanation for the correlation of diversity with recombination rates in humans
    • DOI 10.1086/375657
    • Hellmann I, Ebersberger I, Ptak SE, Pääbo S, Przeworski M. 2003. A neutral explanation for the correlation of diversity with recombination rates in humans. Am J Hum Genet. 72(6):1527-1535. (Pubitemid 36628391)
    • (2003) American Journal of Human Genetics , vol.72 , Issue.6 , pp. 1527-1535
    • Hellmann, I.1    Ebersberger, I.2    Ptak, S.E.3    Paabo, S.4    Przeworski, M.5
  • 30
    • 0034736528 scopus 로고    scopus 로고
    • A test of translational selection at 'silent' sites in the human genome: Base composition comparisons in alternatively spliced genes
    • DOI 10.1016/S0378-1119(00)00482-0, PII S0378111900004820
    • Iida K, Akashi H. 2000. A test of translational selection at 'silent' sites in the human genome: base composition comparisons in alternatively spliced genes. Gene 261(1):93-105. (Pubitemid 32103527)
    • (2000) Gene , vol.261 , Issue.1 , pp. 93-105
    • Iida, K.1    Akashi, H.2
  • 31
    • 56049099553 scopus 로고    scopus 로고
    • Multilocus patterns of nucleotide polymorphism and the demographic history of Populus tremula
    • Ingvarsson PK. 2008. Multilocus patterns of nucleotide polymorphism and the demographic history of Populus tremula. Genetics 180(1): 329-340.
    • (2008) Genetics , vol.180 , Issue.1 , pp. 329-340
    • Ingvarsson, P.K.1
  • 32
    • 77249115187 scopus 로고    scopus 로고
    • Natural selection on synonymous and nonsynonymous mutations shapes patterns of polymorphism in Populus tremula
    • Ingvarsson PK. 2010. Natural selection on synonymous and nonsynonymous mutations shapes patterns of polymorphism in Populus tremula. Mol Biol Evol. 27(3):650-660.
    • (2010) Mol Biol Evol , vol.27 , Issue.3 , pp. 650-660
    • Ingvarsson, P.K.1
  • 33
    • 80053626924 scopus 로고    scopus 로고
    • Characterizing the influence of effective population size on the rate of adaptation: Gillespie's Darwin domain
    • Jensen JD, Bachtrog D. 2011. Characterizing the influence of effective population size on the rate of adaptation: Gillespie's Darwin domain. Genome Biol Evol. 3:687-701.
    • (2011) Genome Biol Evol , vol.3 , pp. 687-701
    • Jensen, J.D.1    Bachtrog, D.2
  • 34
    • 79955442386 scopus 로고    scopus 로고
    • Inference of mutation parameters and selective constraint in mammalian coding sequences by approximate Bayesian computation
    • Keightley PD, Eöry L, Halligan DL, Kirkpatrick M. 2011. Inference of mutation parameters and selective constraint in mammalian coding sequences by approximate Bayesian computation. Genetics 187(4): 1153-1161.
    • (2011) Genetics , vol.187 , Issue.4 , pp. 1153-1161
    • Keightley, P.D.1    Eöry, L.2    Halligan, D.L.3    Kirkpatrick, M.4
  • 35
    • 0034644576 scopus 로고    scopus 로고
    • Deleterious mutations and the evolution of sex
    • Keightley PD, Eyre-Walker A. 2000. Deleterious mutations and the evolution of sex. Science 290(5490):331-333.
    • (2000) Science , vol.290 , Issue.5490 , pp. 331-333
    • Keightley, P.D.1    Eyre-Walker, A.2
  • 36
    • 37249042614 scopus 로고    scopus 로고
    • Joint inference of the distribution of fitness effects of deleterious mutations and population demography based on nucleotide polymorphism frequencies
    • DOI 10.1534/genetics.107.080663
    • Keightley PD, Eyre-Walker A. 2007. Joint inference of the distribution of fitness effects of deleterious mutations and population demography based on nucleotide polymorphism frequencies. Genetics 177(4): 2251-2261. (Pubitemid 350277004)
    • (2007) Genetics , vol.177 , Issue.4 , pp. 2251-2261
    • Keightley, P.D.1    Eyre-Walker, A.2
  • 37
    • 84862672172 scopus 로고    scopus 로고
    • Estimating the rate of adaptive molecular evolution when the evolutionary divergence between species is small
    • Keightley PD, Eyre-Walker A. 2012. Estimating the rate of adaptive molecular evolution when the evolutionary divergence between species is small. J Mol Evol. 74:61-68.
    • (2012) J Mol Evol , vol.74 , pp. 61-68
    • Keightley, P.D.1    Eyre-Walker, A.2
  • 38
    • 0014494672 scopus 로고
    • The number of heterozygous nucleotide sites maintained in a finite population due to steady flux of mutations
    • Kimura M. 1969. The number of heterozygous nucleotide sites maintained in a finite population due to steady flux of mutations. Genetics 61(4):893-903.
    • (1969) Genetics , vol.61 , Issue.4 , pp. 893-903
    • Kimura, M.1
  • 40
    • 62649089109 scopus 로고    scopus 로고
    • Population genomics of domestic and wild yeasts
    • Liti G, et al. 2009. Population genomics of domestic and wild yeasts. Nature 458(7236):337-341.
    • (2009) Nature , vol.458 , Issue.7236 , pp. 337-341
    • Liti, G.1
  • 42
    • 0026428610 scopus 로고
    • Adaptive protein evolution at the Adh locus in Drosophila
    • McDonald JH, Kreitman M. 1991. Adaptive protein evolution at the Adh locus in Drosophila. Nature 351(6328):652-654. (Pubitemid 21896661)
    • (1991) Nature , vol.351 , Issue.6328 , pp. 652-654
    • McDonald, J.H.1    Kreitman, M.2
  • 43
    • 0035157374 scopus 로고    scopus 로고
    • Inferring parameters of mutation, selection and demography from patterns of synonymous site evolution in Drosophila
    • McVean GA, Vieira J. 2001. Inferring parameters of mutation, selection and demography from patterns of synonymous site evolution in Drosophila. Genetics 157(1):245-257. (Pubitemid 32066311)
    • (2001) Genetics , vol.157 , Issue.1 , pp. 245-257
    • McVean, G.A.T.1    Vieira, J.2
  • 44
    • 22744434580 scopus 로고    scopus 로고
    • The pattern of polymorphism in Arabidopsis thaliana
    • Nordborg M, et al. 2005. The pattern of polymorphism in Arabidopsis thaliana. PLoS Biol. 3(7):e196.
    • (2005) PLoS Biol , vol.3 , Issue.7
    • Nordborg, M.1
  • 45
    • 0036667702 scopus 로고    scopus 로고
    • Accounting for background nucleotide composition when measuring codon usage bias
    • Novembre JA. 2002. Accounting for background nucleotide composition when measuring codon usage bias. Mol Biol Evol. 19(8):1390-1394.
    • (2002) Mol Biol Evol , vol.19 , Issue.8 , pp. 1390-1394
    • Novembre, J.A.1
  • 46
    • 73449137909 scopus 로고    scopus 로고
    • Quantifying adaptive evolution in the Drosophila immune system
    • Obbard DJ, Welch JJ, Kim KW, Jiggins FM. 2009. Quantifying adaptive evolution in the Drosophila immune system. PLoS Genet. 5(10): e1000698.
    • (2009) PLoS Genet , vol.5 , Issue.10
    • Obbard, D.J.1    Welch, J.J.2    Kim, K.W.3    Jiggins, F.M.4
  • 47
    • 74849090833 scopus 로고    scopus 로고
    • The rate and molecular spectrum of spontaneous mutations in Arabidopsis thaliana
    • Ossowski S, et al. 2010. The rate and molecular spectrum of spontaneous mutations in Arabidopsis thaliana. Science 327(5961):92-94.
    • (2010) Science , vol.327 , Issue.5961 , pp. 92-94
    • Ossowski, S.1
  • 48
    • 84887212374 scopus 로고    scopus 로고
    • Evidence for variation in the effective population size of animal mitochondrial DNA
    • Piganeau G, Eyre-Walker A. 2009. Evidence for variation in the effective population size of animal mitochondrial DNA. PLoS One 4(2):e4396.
    • (2009) PLoS One , vol.4 , Issue.2
    • Piganeau, G.1    Eyre-Walker, A.2
  • 50
    • 76749097550 scopus 로고    scopus 로고
    • The genetics of human adaptation: Hard sweeps, soft sweeps, and polygenic adaptation
    • Pritchard JK, Pickrell JK, Coop G. 2010. The genetics of human adaptation: hard sweeps, soft sweeps, and polygenic adaptation. Curr Biol. 20(4):R208-R215.
    • (2010) Curr Biol , vol.20 , Issue.4
    • Pritchard, J.K.1    Pickrell, J.K.2    Coop, G.3
  • 51
    • 77956885609 scopus 로고    scopus 로고
    • Adaptation - Not by sweeps alone
    • Pritchard JK, Rienzo AD. 2010. Adaptation - not by sweeps alone. Nat Rev Genet. 11(10):665-667.
    • (2010) Nat Rev Genet , vol.11 , Issue.10 , pp. 665-667
    • Pritchard, J.K.1    Rienzo, A.D.2
  • 52
    • 77951799158 scopus 로고    scopus 로고
    • Analysis of genetic inheritance in a family quartet by whole-genome sequencing
    • Roach JC, et al. 2010. Analysis of genetic inheritance in a family quartet by whole-genome sequencing. Science 328(5978):636-639.
    • (2010) Science , vol.328 , Issue.5978 , pp. 636-639
    • Roach, J.C.1
  • 53
    • 0347380978 scopus 로고    scopus 로고
    • Bayesian Analysis Suggests that Most Amino Acid Replacements in Drosophila Are Driven by Positive Selection
    • DOI 10.1007/s00239-003-0022-3
    • Sawyer SA, Kulathinal RJ, Bustamante CD, Hartl DL. 2003. Bayesian analysis suggests that most amino acid replacements in Drosophila are driven by positive selection. J Mol Evol. 57(Suppl 1):S154-S164. (Pubitemid 37544004)
    • (2003) Journal of Molecular Evolution , vol.57 , Issue.SUPPL. 1
    • Sawyer, S.A.1    Kulathinal, R.J.2    Bustamante, C.D.3    Hartl, D.L.4
  • 55
    • 77954966377 scopus 로고    scopus 로고
    • Genome-wide evidence for efficient positive and purifying selection in Capsella grandiflora, a plant species with a large effective population size
    • Slotte T, Foxe JP, Hazzouri KM, Wright SI. 2010. Genome-wide evidence for efficient positive and purifying selection in Capsella grandiflora, a plant species with a large effective population size. Mol Biol Evol. 27(8):1813-1821.
    • (2010) Mol Biol Evol , vol.27 , Issue.8 , pp. 1813-1821
    • Slotte, T.1    Foxe, J.P.2    Hazzouri, K.M.3    Wright, S.I.4
  • 56
    • 0037186564 scopus 로고    scopus 로고
    • Adaptive protein evolution in Drosophila
    • DOI 10.1038/4151022a
    • Smith NGC, Eyre-Walker A. 2002. Adaptive protein evolution in Drosophila. Nature 415(6875):1022-1024. (Pubitemid 34193448)
    • (2002) Nature , vol.415 , Issue.6875 , pp. 1022-1024
    • Smith, N.G.C.1    Eyre-Walker, A.2
  • 58
    • 78650445284 scopus 로고    scopus 로고
    • Estimation of the neutrality index
    • Stoletzki N, Eyre-Walker A. 2011. Estimation of the neutrality index. Mol Biol Evol. 28(1):63-70.
    • (2011) Mol Biol Evol , vol.28 , Issue.1 , pp. 63-70
    • Stoletzki, N.1    Eyre-Walker, A.2
  • 59
    • 47749146161 scopus 로고    scopus 로고
    • Molecular demographic history of the annual sunflowers Helianthus annuus and H. petiolaris - Large effective population sizes and rates of long-term gene flow
    • DOI 10.1111/j.1558-5646.2008.00415.x
    • Strasburg JL, Rieseberg LH. 2008. Molecular demographic history of the annual sunflowers Helianthus annuus and H. petiolaris - large effective population sizes and rates of long-term gene flow. Evolution 62(8):1936-1950. (Pubitemid 352033254)
    • (2008) Evolution , vol.62 , Issue.8 , pp. 1936-1950
    • Strasburg, J.L.1    Rieseberg, L.H.2
  • 60
    • 79955418125 scopus 로고    scopus 로고
    • Effective population size is positively correlated with levels of adaptive divergence among annual sunflowers
    • Strasburg JL, et al. 2011. Effective population size is positively correlated with levels of adaptive divergence among annual sunflowers. Mol Biol Evol. 28:1569-1580.
    • (2011) Mol Biol Evol , vol.28 , pp. 1569-1580
    • Strasburg, J.L.1
  • 63
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson JD, Higgins DG, Gibson TJ. 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22(22):4673-4680. (Pubitemid 24354800)
    • (1994) Nucleic Acids Research , vol.22 , Issue.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 66
    • 67549098244 scopus 로고    scopus 로고
    • Phylogeographic patterns and demographic history of Schiedea globosa (Caryophyllaceae) on the Hawaiian Islands
    • Wallace LE, Weller SG, Wagner WL, Sakai AK, Nepokroeff M. 2009. Phylogeographic patterns and demographic history of Schiedea globosa (Caryophyllaceae) on the Hawaiian Islands. Am J Bot. 96(5): 958-967.
    • (2009) Am J Bot , vol.96 , Issue.5 , pp. 958-967
    • Wallace, L.E.1    Weller, S.G.2    Wagner, W.L.3    Sakai, A.K.4    Nepokroeff, M.5
  • 67
    • 0025318864 scopus 로고
    • The 'effective number of codons' used in a gene
    • DOI 10.1016/0378-1119(90)90491-9
    • Wright F. 1990. The 'effective number of codons' used in a gene. Gene 87(1):23-29. (Pubitemid 20139850)
    • (1990) Gene , vol.87 , Issue.1 , pp. 23-29
    • Wright, F.1
  • 69
    • 0036729902 scopus 로고    scopus 로고
    • Molecular evolution of functional genes on the mammalian Y chromosome [3]
    • Wyckoff GJ, Li J, Wu CI. 2002. Molecular evolution of functional genes on the mammalian Y chromosome. Mol Biol Evol. 19(9):1633-1636. (Pubitemid 36752788)
    • (2002) Molecular Biology and Evolution , vol.19 , Issue.9 , pp. 1633-1636
    • Wyckoff, G.J.1    Li, J.2    Wu, C.-I.3
  • 70
    • 0030683599 scopus 로고    scopus 로고
    • PAML: A program package for phylogenetic analysis by maximum likelihood
    • Yang Z. 1997. PAML: a program package for phylogenetic analysis by maximum likelihood. Comput Appl Biosci. 13(5):555-556. (Pubitemid 27480216)
    • (1997) Computer Applications in the Biosciences , vol.13 , Issue.5 , pp. 555-556
    • Yang, Z.1
  • 71
    • 70649090279 scopus 로고    scopus 로고
    • Estimating selection intensity on synonymous codon usage in a nonequilibrium population
    • 1SI-23SI
    • Zeng K, Charlesworth B. 2009. Estimating selection intensity on synonymous codon usage in a nonequilibrium population. Genetics 183(2):651-662, 1SI-23SI.
    • (2009) Genetics , vol.183 , Issue.2 , pp. 651-662
    • Zeng, K.1    Charlesworth, B.2
  • 72
    • 76749119389 scopus 로고    scopus 로고
    • Studying patterns of recent evolution at synonymous sites and intronic sites in Drosophila melanogaster
    • Zeng K, Charlesworth B. 2010. Studying patterns of recent evolution at synonymous sites and intronic sites in Drosophila melanogaster. J Mol Evol. 70(1):116-128.
    • (2010) J Mol Evol , vol.70 , Issue.1 , pp. 116-128
    • Zeng, K.1    Charlesworth, B.2
  • 73
    • 27844543705 scopus 로고    scopus 로고
    • Human SNPs reveal no evidence of frequent positive selection
    • DOI 10.1093/molbev/msi240
    • Zhang L, Li WH. 2005. Human SNPs reveal no evidence of frequent positive selection. Mol Biol Evol. 22(12):2504-2507. (Pubitemid 41661386)
    • (2005) Molecular Biology and Evolution , vol.22 , Issue.12 , pp. 2504-2507
    • Zhang, L.1    Li, W.-H.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.