-
1
-
-
0032551901
-
Staphylococcus aureus infections
-
PMID:9709046
-
Lowy FD. Staphylococcus aureus infections. N Engl J Med 1998; 339:520-32; PMID:9709046; http:// dx.doi.org/10.1056/NEJM199808203390806.
-
(1998)
N Engl J Med
, vol.339
, pp. 520-532
-
-
Lowy, F.D.1
-
2
-
-
84856099935
-
Recurrent infections and immune evasion strategies of Staphylococcus aureus
-
PMID:22088393
-
Kim HK, Thammavongsa V, Schneewind O, Missiakas D. Recurrent infections and immune evasion strategies of Staphylococcus aureus. Curr Opin Microbiol 2012; 15:92-9; PMID:22088393; http://dx.doi. org/10.1016/j.mib.2011.10.012.
-
(2012)
Curr Opin Microbiol
, vol.15
, pp. 92-99
-
-
Kim, H.K.1
Thammavongsa, V.2
Schneewind, O.3
Missiakas, D.4
-
3
-
-
69249083586
-
Waves of resistance: Staphylococcus aureus in the antibiotic era
-
PMID:19680247
-
Chambers HF, Deleo FR. Waves of resistance: Staphylococcus aureus in the antibiotic era. Nat Rev Microbiol 2009; 7:629-41; PMID:19680247; http:// dx.doi.org/10.1038/nrmicro2200.
-
(2009)
Nat Rev Microbiol
, vol.7
, pp. 629-641
-
-
Chambers, H.F.1
Deleo, F.R.2
-
4
-
-
0032436996
-
Surface protein adhesins of Staphylococcus aureus
-
PMID:10036727
-
Foster TJ, Höök M. Surface protein adhesins of Staphylococcus aureus. Trends Microbiol 1998; 6:484-8; PMID:10036727; http://dx.doi.org/10. 1016/S0966-842X(98)01400-0.
-
(1998)
Trends Microbiol
, vol.6
, pp. 484-488
-
-
Foster, T.J.1
Höök, M.2
-
5
-
-
0033962325
-
Exotoxins of Staphylococcus aureus
-
PMID:10627489
-
Dinges MM, Orwin PM, Schlievert PM. Exotoxins of Staphylococcus aureus. Clin Microbiol Rev 2000; 13:16- 34; PMID:10627489; http://dx.doi.org/10.1128/ CMR.13.1.16-34.2000.
-
(2000)
Clin Microbiol Rev
, vol.13
, pp. 16-34
-
-
Dinges, M.M.1
Orwin, P.M.2
Schlievert, P.M.3
-
6
-
-
0037898952
-
Autoinduction and signal transduction in the regulation of staphylococcal virulence
-
PMID:12791129
-
Novick RP. Autoinduction and signal transduction in the regulation of staphylococcal virulence. Mol Microbiol 2003; 48:1429-49; PMID:12791129; http://dx.doi.org/10.1046/j.1365-2958.2003.03526.x.
-
(2003)
Mol Microbiol
, vol.48
, pp. 1429-1449
-
-
Novick, R.P.1
-
7
-
-
58549096736
-
Quorum sensing in staphylococci
-
PMID:18713030
-
Novick RP, Geisinger E. Quorum sensing in staphylococci. Annu Rev Genet 2008; 42:541-64; PMID:18713030; http://dx.doi.org/10.1146/annurev. genet.42.110807.091640.
-
(2008)
Annu Rev Genet
, vol.42
, pp. 541-564
-
-
Novick, R.P.1
Geisinger, E.2
-
8
-
-
77954804120
-
Staphylococcus aureus nonribosomal peptide secondary metabolites regulate virulence
-
PMID:20522739
-
Wyatt MA, Wang W, Roux CM, Beasley FC, Heinrichs DE, Dunman PM, et al. Staphylococcus aureus nonribosomal peptide secondary metabolites regulate virulence. Science 2010; 329:294-6; PMID:20522739; http:// dx.doi.org/10.1126/ science.1188888.
-
(2010)
Science
, vol.329
, pp. 294-296
-
-
Wyatt, M.A.1
Wang, W.2
Roux, C.M.3
Beasley, F.C.4
Heinrichs, D.E.5
Dunman, P.M.6
-
9
-
-
80054796832
-
The modulation of Staphylococcus aureus mRNA turnover
-
PMID:22004033
-
Morrison JM, Dunman PM. The modulation of Staphylococcus aureus mRNA turnover. Future Microbiol 2011; 6:1141-50; PMID:22004033; http:// dx.doi.org/10.2217/fmb.11.102.
-
(2011)
Future Microbiol
, vol.6
, pp. 1141-1150
-
-
Morrison, J.M.1
Dunman, P.M.2
-
10
-
-
34249881878
-
Staphylococcus aureus RNAIII coordinately represses the synthesis of virulence factors and the transcription regulator Rot by an antisense mechanism
-
PMID:17545468
-
Boisset S, Geissmann T, Huntzinger E, Fechter P, Bendridi N, Possedko M, et al. Staphylococcus aureus RNAIII coordinately represses the synthesis of virulence factors and the transcription regulator Rot by an antisense mechanism. Genes Dev 2007; 21:1353- 66; PMID:17545468; http://dx.doi.org/10.1101/ gad.423507.
-
(2007)
Genes Dev
, vol.21
, pp. 1353-1366
-
-
Boisset, S.1
Geissmann, T.2
Huntzinger, E.3
Fechter, P.4
Bendridi, N.5
Possedko, M.6
-
11
-
-
33746561248
-
Inhibition of rot translation by RNAIII, a key feature of agr function
-
PMID:16879652
-
Geisinger E, Adhikari RP, Jin R, Ross HF, Novick RP. Inhibition of rot translation by RNAIII, a key feature of agr function. Mol Microbiol 2006; 61:1038-48; PMID:16879652; http://dx.doi.org/10.1111/j.1365- 2958.2006.05292.x.
-
(2006)
Mol Microbiol
, vol.61
, pp. 1038-1048
-
-
Geisinger, E.1
Adhikari, R.P.2
Jin, R.3
Ross, H.F.4
Novick, R.P.5
-
12
-
-
77954952126
-
Messenger RNA Turnover Processes in Escherichia coli, Bacillus subtilis and Emerging Studies in Staphylococcus aureus
-
PMID:19936110
-
Anderson KL, Dunman PM. Messenger RNA Turnover Processes in Escherichia coli, Bacillus subtilis and Emerging Studies in Staphylococcus aureus. Int J Microbiol 2009; 2009:525491; PMID:19936110; http://dx.doi.org/10.1155/2009/ 525491.
-
(2009)
Int J Microbiol 2009
, pp. 525491
-
-
Anderson, K.L.1
Dunman, P.M.2
-
13
-
-
33645210668
-
Characterizing the effect of the Staphylococcus aureus virulence factor regulator, SarA, on log-phase mRNA half-lives
-
PMID:16547047
-
Roberts C, Anderson KL, Murphy E, Projan SJ, Mounts W, Hurlburt B, et al. Characterizing the effect of the Staphylococcus aureus virulence factor regulator, SarA, on log-phase mRNA half-lives. J Bacteriol 2006; 188:2593-603; PMID:16547047; http://dx.doi. org/10.1128/JB.188.7.2593-603.2006.
-
(2006)
J Bacteriol
, vol.188
, pp. 2593-2603
-
-
Roberts, C.1
Anderson, K.L.2
Murphy, E.3
Projan, S.J.4
Mounts, W.5
Hurlburt, B.6
-
14
-
-
0027180031
-
Synthesis of staphylococcal virulence factors is controlled by a regulatory RNA molecule
-
PMID:7691599.
-
Novick RP, Ross HF, Projan SJ, Kornblum J, Kreiswirth B, Moghazeh S. Synthesis of staphylococcal virulence factors is controlled by a regulatory RNA molecule. EMBO J 1993; 12:3967-75; PMID:7691599.
-
(1993)
EMBO J
, vol.12
, pp. 3967-3975
-
-
Novick, R.P.1
Ross, H.F.2
Projan, S.J.3
Kornblum, J.4
Kreiswirth, B.5
Moghazeh, S.6
-
15
-
-
20144380295
-
Staphylococcus aureus RNAIII and the endoribonuclease III coordinately regulate spa gene expression
-
PMID:15678100
-
Huntzinger E, Boisset S, Saveanu C, Benito Y, Geissmann T, Namane A, et al. Staphylococcus aureus RNAIII and the endoribonuclease III coordinately regulate spa gene expression. EMBO J 2005; 24:824- 35; PMID:15678100; http://dx.doi.org/10.1038/ sj.emboj.7600572.
-
(2005)
EMBO J
, vol.24
, pp. 824-835
-
-
Huntzinger, E.1
Boisset, S.2
Saveanu, C.3
Benito, Y.4
Geissmann, T.5
Namane, A.6
-
16
-
-
77950404950
-
Staphylococcus aureus RNAIII binds to two distant regions of coa mRNA to arrest translation and promote mRNA degradation
-
PMID:20300607
-
Chevalier C, Boisset S, Romilly C, Masquida B, Fechter P, Geissmann T, et al. Staphylococcus aureus RNAIII binds to two distant regions of coa mRNA to arrest translation and promote mRNA degradation. PLoS Pathog 2010; 6:1000809; PMID:20300607; http://dx.doi.org/10.1371/journal.ppat.1000809.
-
(2010)
PLoS Pathog
, vol.6
, pp. 1000809
-
-
Chevalier, C.1
Boisset, S.2
Romilly, C.3
Masquida, B.4
Fechter, P.5
Geissmann, T.6
-
17
-
-
79953268826
-
The Staphylococcus aureus RNome and its commitment to virulence
-
PMID:21423670
-
Felden B, Vandenesch F, Bouloc P, Romby P. The Staphylococcus aureus RNome and its commitment to virulence. PLoS Pathog 2011; 7:1002006; PMID:21423670; http://dx.doi.org/10.1371/journal. ppat.1002006.
-
(2011)
PLoS Pathog
, vol.7
, pp. 1002006
-
-
Felden, B.1
Vandenesch, F.2
Bouloc, P.3
Romby, P.4
-
18
-
-
84957021286
-
A Current Overview of Regulatory Rnas in Staphylococcus aureus
-
edited by Marchfelder A, Hess W, Wien and New York: Wiley Verlag
-
Caldelari I, Fechter P, Lioliou E, Romilly C, Chevalier C, Gaspin C, et al. "A Current Overview of Regulatory Rnas in Staphylococcus aureus." In Regulatory RNAs in Prokaryotes, edited by Marchfelder A, Hess W, Wien and New York: Wiley Verlag 2011.
-
(2011)
Regulatory RNAs in Prokaryotes
-
-
Caldelari, I.1
Fechter, P.2
Lioliou, E.3
Romilly, C.4
Chevalier, C.5
Gaspin, C.6
-
19
-
-
84863924309
-
Bacterial small RNA regulators: Versatile roles and rapidly evolving variations
-
PMID:20980440
-
Gottesman S, Storz G. Bacterial small RNA regulators: versatile roles and rapidly evolving variations. Cold Spring Harb Perspect Biol 2011; 3:3; PMID:20980440; http://dx.doi.org/10.1101/cshperspect.a003798.
-
(2011)
Cold Spring Harb Perspect Biol
, vol.3
, pp. 3
-
-
Gottesman, S.1
Storz, G.2
-
20
-
-
80053019485
-
Regulation by small RNAs in bacteria: Expanding frontiers
-
PMID:21925377
-
Storz G, Vogel J, Wassarman KM. Regulation by small RNAs in bacteria: expanding frontiers. Mol Cell 2011; 43:880-91; PMID:21925377; http://dx.doi. org/10.1016/j.molcel.2011.08.022.
-
(2011)
Mol Cell
, vol.43
, pp. 880-891
-
-
Storz, G.1
Vogel, J.2
Wassarman, K.M.3
-
21
-
-
26444600764
-
Small RNA genes expressed from Staphylococcus aureus genomic and pathogenicity islands with specific expression among pathogenic strains
-
PMID:16183745
-
Pichon C, Felden B. Small RNA genes expressed from Staphylococcus aureus genomic and pathogenicity islands with specific expression among pathogenic strains. Proc Natl Acad Sci USA 2005; 102:14249- 54; PMID:16183745; http://dx.doi.org/10.1073/ pnas.0503838102.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 14249-14254
-
-
Pichon, C.1
Felden, B.2
-
22
-
-
52449093583
-
Highthroughput, kingdom-wide prediction and annotation of bacterial non-coding RNAs
-
PMID:18787707
-
Livny J, Teonadi H, Livny M, Waldor MK. Highthroughput, kingdom-wide prediction and annotation of bacterial non-coding RNAs. PLoS One 2008; 3:3197; PMID:18787707; http://dx.doi.org/10.1371/ journal.pone.0003197.
-
(2008)
PLoS One
, vol.3
, pp. 3197
-
-
Livny, J.1
Teonadi, H.2
Livny, M.3
Waldor, M.K.4
-
23
-
-
73849116916
-
A search for small noncoding RNAs in Staphylococcus aureus reveals a conserved sequence motif for regulation
-
PMID:19786493
-
Geissmann T, Chevalier C, Cros MJ, Boisset S, Fechter P, Noirot C, et al. A search for small noncoding RNAs in Staphylococcus aureus reveals a conserved sequence motif for regulation. Nucleic Acids Res 2009; 37:7239- 57; PMID:19786493; http://dx.doi.org/10.1093/nar/ gkp668.
-
(2009)
Nucleic Acids Res
, vol.37
, pp. 7239-7257
-
-
Geissmann, T.1
Chevalier, C.2
Cros, M.J.3
Boisset, S.4
Fechter, P.5
Noirot, C.6
-
24
-
-
66449091512
-
Single-pass classification of all noncoding sequences in a bacterial genome using phylogenetic profiles
-
PMID:19237465
-
Marchais A, Naville M, Bohn C, Bouloc P, Gautheret D. Single-pass classification of all noncoding sequences in a bacterial genome using phylogenetic profiles. Genome Res 2009; 19:1084-92; PMID:19237465; http://dx.doi.org/10.1101/gr.089714.108.
-
(2009)
Genome Res
, vol.19
, pp. 1084-1092
-
-
Marchais, A.1
Naville, M.2
Bohn, C.3
Bouloc, P.4
Gautheret, D.5
-
25
-
-
33749316678
-
Characterization of the Staphylococcus aureus heat shock, cold shock, stringent and SOS responses and their effects on logphase mRNA turnover
-
PMID:16980476
-
Anderson KL, Roberts C, Disz T, Vonstein V, Hwang K, Overbeek R, et al. Characterization of the Staphylococcus aureus heat shock, cold shock, stringent and SOS responses and their effects on logphase mRNA turnover. J Bacteriol 2006; 188:6739- 56; PMID:16980476; http://dx.doi.org/10.1128/ JB.00609-06.
-
(2006)
J Bacteriol
, vol.188
, pp. 6739-6756
-
-
Anderson, K.L.1
Roberts, C.2
Disz, T.3
Vonstein, V.4
Hwang, K.5
Overbeek, R.6
-
26
-
-
80053608322
-
Characterization of components of the Staphylococcus aureus mRNA degradosome holoenzyme-like complex
-
PMID:21764917
-
Roux CM, DeMuth JP, Dunman PM. Characterization of components of the Staphylococcus aureus mRNA degradosome holoenzyme-like complex. J Bacteriol 2011; 193:5520-6; PMID:21764917; http://dx.doi. org/10.1128/JB.05485-11.
-
(2011)
J Bacteriol
, vol.193
, pp. 5520-5526
-
-
Roux, C.M.1
DeMuth, J.P.2
Dunman, P.M.3
-
27
-
-
77954563760
-
Identification of differentially expressed small non-protein-coding RNAs in Staphylococcus aureus displaying both the normal and the small-colony variant phenotype
-
(Berl) PMID:20151104
-
Abu-Qatouseh LF, Chinni SV, Seggewiss J, Proctor RA, Brosius J, Rozhdestvensky TS, et al. Identification of differentially expressed small non-protein-coding RNAs in Staphylococcus aureus displaying both the normal and the small-colony variant phenotype. J Mol Med (Berl) 2010; 88:565-75; PMID:20151104; http:// dx.doi.org/10.1007/s00109-010-0597-2.
-
(2010)
J Mol Med
, vol.88
, pp. 565-575
-
-
Abu-Qatouseh, L.F.1
Chinni, S.V.2
Seggewiss, J.3
Proctor, R.A.4
Brosius, J.5
Rozhdestvensky, T.S.6
-
28
-
-
78049393967
-
Experimental discovery of small RNAs in Staphylococcus aureus reveals a riboregulator of central metabolism
-
PMID:20511587
-
Bohn C, Rigoulay C, Chabelskaya S, Sharma CM, Marchais A, Skorski P, et al. Experimental discovery of small RNAs in Staphylococcus aureus reveals a riboregulator of central metabolism. Nucleic Acids Res 2010; 38:6620-36; PMID:20511587; http://dx.doi. org/10.1093/nar/gkq462.
-
(2010)
Nucleic Acids Res
, vol.38
, pp. 6620-6636
-
-
Bohn, C.1
Rigoulay, C.2
Chabelskaya, S.3
Sharma, C.M.4
Marchais, A.5
Skorski, P.6
-
29
-
-
77956278172
-
Cartography of methicillin- Resistant S. aureus transcripts: Detection, orientation and temporal expression during growth phase and stress conditions
-
PMID:20505759
-
Beaume M, Hernandez D, Farinelli L, Deluen C, Linder P, Gaspin C, et al. Cartography of methicillin- resistant S. aureus transcripts: detection, orientation and temporal expression during growth phase and stress conditions. PLoS One 2010; 5:10725; PMID:20505759; http://dx.doi.org/10.1371/journal. pone.0010725.
-
(2010)
PLoS One
, vol.5
, pp. 10725
-
-
Beaume, M.1
Hernandez, D.2
Farinelli, L.3
Deluen, C.4
Linder, P.5
Gaspin, C.6
-
30
-
-
78650909811
-
Searching for small σB-regulated genes in Staphylococcus aureus
-
PMID:20978742
-
Nielsen JS, Christiansen MH, Bonde M, Gottschalk S, Frees D, Thomsen LE, et al. Searching for small σB-regulated genes in Staphylococcus aureus. Arch Microbiol 2011; 193:23-34; PMID:20978742; http:// dx.doi.org/10.1007/ s00203-010-0641-1.
-
(2011)
Arch Microbiol
, vol.193
, pp. 23-34
-
-
Nielsen, J.S.1
Christiansen, M.H.2
Bonde, M.3
Gottschalk, S.4
Frees, D.5
Thomsen, L.E.6
-
31
-
-
84855464046
-
A cis-antisense RNA acts in trans in Staphylococcus aureus to control translation of a human cytolytic peptide
-
PMID:22198463
-
Sayed N, Jousselin A, Felden B. A cis-antisense RNA acts in trans in Staphylococcus aureus to control translation of a human cytolytic peptide. Nat Struct Mol Biol 2012; 19:105-12; PMID:22198463; http://dx.doi. org/10.1038/nsmb.2193.
-
(2012)
Nat Struct Mol Biol
, vol.19
, pp. 105-112
-
-
Sayed, N.1
Jousselin, A.2
Felden, B.3
-
32
-
-
84055200530
-
Genome-wide antisense transcription drives mRNA processing in bacteria
-
PMID:22123973
-
Lasa I, Toledo-Arana A, Dobin A, Villanueva M, de los Mozos IR, Vergara-Irigaray M, et al. Genome-wide antisense transcription drives mRNA processing in bacteria. Proc Natl Acad Sci USA 2011; 108:20172- 7; PMID:22123973; http://dx.doi.org/10.1073/ pnas.1113521108.
-
(2011)
Proc Natl Acad Sci USA
, vol.108
, pp. 20172-20177
-
-
Lasa, I.1
Toledo-Arana, A.2
Dobin, A.3
Villanueva, M.4
De Los Mozos, I.R.5
Vergara-Irigaray, M.6
-
33
-
-
70349199881
-
Riboswitches: From ancient gene-control systems to modern drug targets
-
PMID:19722830
-
Breaker RR. Riboswitches: from ancient gene-control systems to modern drug targets. Future Microbiol 2009; 4:771-3; PMID:19722830; http://dx.doi. org/10.2217/fmb.09.46.
-
(2009)
Future Microbiol
, vol.4
, pp. 771-773
-
-
Breaker, R.R.1
-
34
-
-
85011941301
-
Magnesium-sensing riboswitches in bacteria
-
PMID:20023416
-
Ramesh A, Winkler WC. Magnesium-sensing riboswitches in bacteria. RNA Biol 2010; 7:77-83; PMID:20023416; http://dx.doi.org/10.4161/ rna.7.1.10490.
-
(2010)
RNA Biol
, vol.7
, pp. 77-83
-
-
Ramesh, A.1
Winkler, W.C.2
-
35
-
-
85011936076
-
Riboswitch RNAs: Regulation of gene expression by direct monitoring of a physiological signal
-
PMID:20061810
-
Smith AM, Fuchs RT, Grundy FJ, Henkin TM. Riboswitch RNAs: regulation of gene expression by direct monitoring of a physiological signal. RNA Biol 2010; 7:104-10; PMID:20061810; http://dx.doi. org/10.4161/rna.7.1.10757.
-
(2010)
RNA Biol
, vol.7
, pp. 104-110
-
-
Smith, A.M.1
Fuchs, R.T.2
Grundy, F.J.3
Henkin, T.M.4
-
36
-
-
85011941305
-
Translational control of bacterial heat shock and virulence genes by temperature-sensing mRNAs
-
PMID:20009504
-
Narberhaus F. Translational control of bacterial heat shock and virulence genes by temperature-sensing mRNAs. RNA Biol 2010; 7:84-9; PMID:20009504; http://dx.doi.org/10.4161/rna.7.1.10501.
-
(2010)
RNA Biol
, vol.7
, pp. 84-89
-
-
Narberhaus, F.1
-
37
-
-
80052973462
-
Prospects for riboswitch discovery and analysis
-
PMID:21925376
-
Breaker RR. Prospects for riboswitch discovery and analysis. Mol Cell 2011; 43:867-79; PMID:21925376; http://dx.doi.org/10.1016/j.molcel.2011.08.024.
-
(2011)
Mol Cell
, vol.43
, pp. 867-879
-
-
Breaker, R.R.1
-
38
-
-
66549094626
-
The long and the short of riboswitches
-
PMID:19303767
-
Serganov A. The long and the short of riboswitches. Curr Opin Struct Biol 2009; 19:251-9; PMID:19303767; http://dx.doi.org/10.1016/j.sbi.2009.02.002.
-
(2009)
Curr Opin Struct Biol
, vol.19
, pp. 251-259
-
-
Serganov, A.1
-
39
-
-
74549174202
-
Determination of riboswitch structures: Light at the end of the tunnel?
-
PMID:20061809
-
Serganov A. Determination of riboswitch structures: light at the end of the tunnel? RNA Biol 2010; 7:98- 103; PMID:20061809; http://dx.doi.org/10.4161/ rna.7.1.10756.
-
(2010)
RNA Biol
, vol.7
, pp. 98-103
-
-
Serganov, A.1
-
40
-
-
63749126957
-
Expanding roles for metabolite-sensing regulatory RNAs
-
PMID:19250859
-
Dambach MD, Winkler WC. Expanding roles for metabolite-sensing regulatory RNAs. Curr Opin Microbiol 2009; 12:161-9; PMID:19250859; http:// dx.doi.org/10.1016/j.mib.2009.01.012.
-
(2009)
Curr Opin Microbiol
, vol.12
, pp. 161-169
-
-
Dambach, M.D.1
Winkler, W.C.2
-
41
-
-
46349083026
-
The distributions, mechanisms and structures of metabolite-binding riboswitches
-
PMID:17997835
-
Barrick JE, Breaker RR. The distributions, mechanisms and structures of metabolite-binding riboswitches. Genome Biol 2007; 8:239; PMID:17997835; http:// dx.doi.org/10.1186/gb-2007-8-11-r239.
-
(2007)
Genome Biol
, vol.8
, pp. 239
-
-
Barrick, J.E.1
Breaker, R.R.2
-
42
-
-
34547558201
-
A computational pipeline for highthroughput discovery of cis-regulatory noncoding RNA in prokaryotes
-
PMID:17616982
-
Yao Z, Barrick J, Weinberg Z, Neph S, Breaker R, Tompa M, et al. A computational pipeline for highthroughput discovery of cis-regulatory noncoding RNA in prokaryotes. PLoS Comput Biol 2007; 3:126; PMID:17616982; http://dx.doi.org/10.1371/journal. pcbi.0030126.
-
(2007)
PLoS Comput Biol
, vol.3
, pp. 126
-
-
Yao, Z.1
Barrick, J.2
Weinberg, Z.3
Neph, S.4
Breaker, R.5
Tompa, M.6
-
43
-
-
77952837218
-
Operon structure of Staphylococcus aureus
-
PMID:20150412
-
ten Broeke-Smits NJ, Pronk TE, Jongerius I, Bruning O, Wittink FR, Breit TM, et al. Operon structure of Staphylococcus aureus. Nucleic Acids Res 2010; 38:3263-74; PMID:20150412; http://dx.doi. org/10.1093/nar/gkq058.
-
(2010)
Nucleic Acids Res
, vol.38
, pp. 3263-3274
-
-
Ten Broeke-Smits, N.J.1
Pronk, T.E.2
Jongerius, I.3
Bruning, O.4
Wittink, F.R.5
Breit, T.M.6
-
44
-
-
2342511433
-
New RNA motifs suggest an expanded scope for riboswitches in bacterial genetic control
-
PMID:15096624
-
Barrick JE, Corbino KA, Winkler WC, Nahvi A, Mandal M, Collins J, et al. New RNA motifs suggest an expanded scope for riboswitches in bacterial genetic control. Proc Natl Acad Sci USA 2004; 101:6421- 6; PMID:15096624; http://dx.doi.org/10.1073/ pnas.0308014101.
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, pp. 6421-6426
-
-
Barrick, J.E.1
Corbino, K.A.2
Winkler, W.C.3
Nahvi, A.4
Mandal, M.5
Collins, J.6
-
45
-
-
72749118512
-
A pH-responsive riboregulator
-
PMID:19933154
-
Nechooshtan G, Elgrably-Weiss M, Sheaffer A, Westhof E, Altuvia S. A pH-responsive riboregulator. Genes Dev 2009; 23:2650-62; PMID:19933154; http://dx.doi.org/10.1101/gad.552209.
-
(2009)
Genes Dev
, vol.23
, pp. 2650-2662
-
-
Nechooshtan, G.1
Elgrably-Weiss, M.2
Sheaffer, A.3
Westhof, E.4
Altuvia, S.5
-
46
-
-
10044288415
-
Effect of mild acid on gene expression in Staphylococcus aureus
-
PMID:15576791
-
Weinrick B, Dunman PM, McAleese F, Murphy E, Projan SJ, Fang Y, et al. Effect of mild acid on gene expression in Staphylococcus aureus. J Bacteriol 2004; 186:8407-23; PMID:15576791; http://dx.doi. org/10.1128/JB.186.24.8407-23. 2004.
-
(2004)
J Bacteriol
, vol.186
, pp. 8407-8423
-
-
Weinrick, B.1
Dunman, P.M.2
McAleese, F.3
Murphy, E.4
Projan, S.J.5
Fang, Y.6
-
47
-
-
1642586299
-
Control of gene expression by a natural metabolite- Responsive ribozyme
-
PMID:15029187
-
Winkler WC, Nahvi A, Roth A, Collins JA, Breaker RR. Control of gene expression by a natural metabolite- responsive ribozyme. Nature 2004; 428:281- 6; PMID:15029187; http://dx.doi.org/10.1038/ nature02362.
-
(2004)
Nature
, vol.428
, pp. 281-286
-
-
Winkler, W.C.1
Nahvi, A.2
Roth, A.3
Collins, J.A.4
Breaker, R.R.5
-
48
-
-
33748325570
-
Structural basis of glmS ribozyme activation by glucosamine-6-phosphate
-
PMID:16990543
-
Klein DJ, Ferré-D'Amaré AR. Structural basis of glmS ribozyme activation by glucosamine-6-phosphate. Science 2006; 313:1752-6; PMID:16990543; http:// dx.doi.org/10.1126/science.1129666.
-
(2006)
Science
, vol.313
, pp. 1752-1756
-
-
Klein, D.J.1
Ferré-D'Amaré, A.R.2
-
49
-
-
33846279049
-
Structural investigation of the GlmS ribozyme bound to Its catalytic cofactor
-
PMID:17196404
-
Cochrane JC, Lipchock SV, Strobel SA. Structural investigation of the GlmS ribozyme bound to Its catalytic cofactor. Chem Biol 2007; 14:97-105; PMID:17196404; http://dx.doi.org/10.1016/j.chembiol. 2006.12.005.
-
(2007)
Chem Biol
, vol.14
, pp. 97-105
-
-
Cochrane, J.C.1
Lipchock, S.V.2
Strobel, S.A.3
-
50
-
-
37249040135
-
Mechanism of mRNA destabilization by the glmS ribozyme
-
PMID:18079181
-
Collins JA, Irnov I, Baker S, Winkler WC. Mechanism of mRNA destabilization by the glmS ribozyme. Genes Dev 2007; 21:3356-68; PMID:18079181; http:// dx.doi.org/10.1101/gad.1605307.
-
(2007)
Genes Dev
, vol.21
, pp. 3356-3368
-
-
Collins, J.A.1
Irnov, I.2
Baker, S.3
Winkler, W.C.4
-
51
-
-
54549105804
-
S-box and T-box riboswitches and antisense RNA control a sulfur metabolic operon of Clostridium acetobutylicum
-
PMID:18812398
-
André G, Even S, Putzer H, Burguière P, Croux C, Danchin A, et al. S-box and T-box riboswitches and antisense RNA control a sulfur metabolic operon of Clostridium acetobutylicum. Nucleic Acids Res 2008; 36:5955-69; PMID:18812398; http://dx.doi. org/10.1093/nar/gkn601.
-
(2008)
Nucleic Acids Res
, vol.36
, pp. 5955-5969
-
-
André, G.1
Even, S.2
Putzer, H.3
Burguière, P.4
Croux, C.5
Danchin, A.6
-
52
-
-
70350771280
-
A trans-acting riboswitch controls expression of the virulence regulator PrfA in Listeria monocytogenes
-
PMID:19914169
-
Loh E, Dussurget O, Gripenland J, Vaitkevicius K, Tiensuu T, Mandin P, et al. A trans-acting riboswitch controls expression of the virulence regulator PrfA in Listeria monocytogenes. Cell 2009; 139:770- 9; PMID:19914169; http://dx.doi.org/10.1016/j. cell.2009.08.046.
-
(2009)
Cell
, vol.139
, pp. 770-779
-
-
Loh, E.1
Dussurget, O.2
Gripenland, J.3
Vaitkevicius, K.4
Tiensuu, T.5
Mandin, P.6
-
53
-
-
77956650471
-
Therapeutic applications of ribozymes and riboswitches
-
PMID:20685165
-
Mulhbacher J, St-Pierre P, Lafontaine DA. Therapeutic applications of ribozymes and riboswitches. Curr Opin Pharmacol 2010; 10:551-6; PMID:20685165; http:// dx.doi.org/10.1016/j.coph.2010.07.002.
-
(2010)
Curr Opin Pharmacol
, vol.10
, pp. 551-556
-
-
Mulhbacher, J.1
St-Pierre, P.2
Lafontaine, D.A.3
-
54
-
-
77954079519
-
Novel riboswitch ligand analogs as selective inhibitors of guanine-related metabolic pathways
-
PMID:20421948
-
Mulhbacher J, Brouillette E, Allard M, Fortier LC, Malouin F, Lafontaine DA. Novel riboswitch ligand analogs as selective inhibitors of guanine-related metabolic pathways. PLoS Pathog 2010; 6:1000865; PMID:20421948; http://dx.doi.org/10.1371/journal. ppat.1000865.
-
(2010)
PLoS Pathog
, vol.6
, pp. 1000865
-
-
Mulhbacher, J.1
Brouillette, E.2
Allard, M.3
Fortier, L.C.4
Malouin, F.5
Lafontaine, D.A.6
-
55
-
-
0022573589
-
Regulation of exoprotein gene expression in Staphylococcus aureus by agar
-
PMID:3007938
-
Recsei P, Kreiswirth B, O'Reilly M, Schlievert P, Gruss A, Novick RP. Regulation of exoprotein gene expression in Staphylococcus aureus by agar. Mol Gen Genet 1986; 202:58-61; PMID:3007938; http://dx.doi. org/10.1007/BF00330517.
-
(1986)
Mol Gen Genet
, vol.202
, pp. 58-61
-
-
Recsei, P.1
Kreiswirth, B.2
O'Reilly, M.3
Schlievert, P.4
Gruss, A.5
Novick, R.P.6
-
56
-
-
0035212002
-
Transcription profiling-based identification of Staphylococcus aureus genes regulated by the agr and/or sarA loci
-
PMID:11717293
-
Dunman PM, Murphy E, Haney S, Palacios D, Tucker- Kellogg G, Wu S, et al. Transcription profiling-based identification of Staphylococcus aureus genes regulated by the agr and/or sarA loci. J Bacteriol 2001; 183:7341- 53; PMID:11717293; http://dx.doi.org/10.1128/ JB.183.24.7341-53.2001.
-
(2001)
J Bacteriol
, vol.183
, pp. 7341-7353
-
-
Dunman, P.M.1
Murphy, E.2
Haney, S.3
Palacios, D.4
Tucker-Kellogg, G.5
Wu, S.6
-
57
-
-
53349128304
-
RNAIII-independent target gene control by the agr quorum-sensing system: Insight into the evolution of virulence regulation in Staphylococcus aureus
-
PMID:18851841
-
Queck SY, Jameson-Lee M, Villaruz AE, Bach TH, Khan BA, Sturdevant DE, et al. RNAIII-independent target gene control by the agr quorum-sensing system: insight into the evolution of virulence regulation in Staphylococcus aureus. Mol Cell 2008; 32:150-8; PMID:18851841; http://dx.doi.org/10.1016/j.molcel. 2008.08.005.
-
(2008)
Mol Cell
, vol.32
, pp. 150-158
-
-
Queck, S.Y.1
Jameson-Lee, M.2
Villaruz, A.E.3
Bach, T.H.4
Khan, B.A.5
Sturdevant, D.E.6
-
58
-
-
73849103559
-
An overview of RNAs with regulatory functions in gram-positive bacteria
-
PMID:19859665
-
Romby P, Charpentier E. An overview of RNAs with regulatory functions in gram-positive bacteria. Cell Mol Life Sci 2010; 67:217-37; PMID:19859665; http://dx.doi.org/10.1007/s00018-009-0162-8.
-
(2010)
Cell Mol Life Sci
, vol.67
, pp. 217-237
-
-
Romby, P.1
Charpentier, E.2
-
59
-
-
0029113833
-
Activation of alpha-toxin translation in Staphylococcus aureus by the trans-encoded antisense RNA, RNAIII
-
PMID:7556100.
-
Morfeldt E, Taylor D, von Gabain A, Arvidson S. Activation of alpha-toxin translation in Staphylococcus aureus by the trans-encoded antisense RNA, RNAIII. EMBO J 1995; 14:4569-77; PMID:7556100.
-
(1995)
EMBO J
, vol.14
, pp. 4569-4577
-
-
Morfeldt, E.1
Taylor, D.2
Von Gabain, A.3
Arvidson, S.4
-
60
-
-
65549141161
-
Stochastic analysis of the SOS response in Escherichia coli
-
PMID:19424504
-
Shimoni Y, Altuvia S, Margalit H, Biham O. Stochastic analysis of the SOS response in Escherichia coli. PLoS One 2009; 4:5363; PMID:19424504; http://dx.doi. org/10.1371/journal.pone.0005363.
-
(2009)
PLoS One
, vol.4
, pp. 5363
-
-
Shimoni, Y.1
Altuvia, S.2
Margalit, H.3
Biham, O.4
-
61
-
-
80052799967
-
Discriminating tastes: Physiological contributions of the Hfq-binding small RNA Spot 42 to catabolite repression
-
PMID:21788732
-
Beisel CL, Storz G. Discriminating tastes: Physiological contributions of the Hfq-binding small RNA Spot 42 to catabolite repression. RNA Biol 2011; 8:8; PMID:21788732; http://dx.doi.org/10.4161/ rna.8.5.16024.
-
(2011)
RNA Biol
, vol.8
, pp. 8
-
-
Beisel, C.L.1
Storz, G.2
-
62
-
-
79952572728
-
RNAIII activates map expression by forming an RNARNA complex in Staphylococcus aureus
-
PMID:21349272
-
Liu Y, Mu C, Ying X, Li W, Wu N, Dong J, et al. RNAIII activates map expression by forming an RNARNA complex in Staphylococcus aureus. FEBS Lett 2011; 585:899-905; PMID:21349272; http://dx.doi. org/10.1016/j.febslet.2011.02. 021.
-
(2011)
FEBS Lett
, vol.585
, pp. 899-905
-
-
Liu, Y.1
Mu, C.2
Ying, X.3
Li, W.4
Wu, N.5
Dong, J.6
-
63
-
-
33847095025
-
No Detectable Effect of RNA-Binidng Protein Hfq Absence in Staphylococcus aureus
-
PMID:17233889
-
Bohn C, Rigoulay C, Bouloc P. No Detectable Effect of RNA-Binidng Protein Hfq Absence in Staphylococcus aureus. BMC Microbiol 2007; 7:1-10; PMID:17233889; http://dx.doi.org/10.1186/1471- 2180-7-10.
-
(2007)
BMC Microbiol
, vol.7
, pp. 1-10
-
-
Bohn, C.1
Rigoulay, C.2
Bouloc, P.3
-
64
-
-
51149086343
-
agr function in clinical Staphylococcus aureus isolates
-
PMID:18667559
-
Traber KE, Lee E, Benson S, Corrigan R, Cantera M, Shopsin B, et al. agr function in clinical Staphylococcus aureus isolates. Microbiology 2008; 154:2265- 74; PMID:18667559; http://dx.doi.org/10.1099/ mic.0.2007/011874-0.
-
(2008)
Microbiology
, vol.154
, pp. 2265-2274
-
-
Traber, K.E.1
Lee, E.2
Benson, S.3
Corrigan, R.4
Cantera, M.5
Shopsin, B.6
-
65
-
-
77950369224
-
Growth phase-dependent regulation of the global virulence regulator Rot in clinical isolates of Staphylococcus aureus
-
PMID:19665927
-
Jelsbak L, Hemmingsen L, Donat S, Ohlsen K, Boye K, Westh H, et al. Growth phase-dependent regulation of the global virulence regulator Rot in clinical isolates of Staphylococcus aureus. Int J Med Microbiol 2010; 300:229-36; PMID:19665927; http://dx.doi. org/10.1016/j.ijmm.2009.07.003.
-
(2010)
Int J Med Microbiol
, vol.300
, pp. 229-236
-
-
Jelsbak, L.1
Hemmingsen, L.2
Donat, S.3
Ohlsen, K.4
Boye, K.5
Westh, H.6
-
66
-
-
33749642880
-
Transcriptional profiling of a Staphylococcus aureus clinical isolate and its isogenic agr and sarA mutants reveals global differences in comparison to the laboratory strain RN6390
-
PMID:17005987
-
Cassat J, Dunman PM, Murphy E, Projan SJ, Beenken KE, Palm KJ, et al. Transcriptional profiling of a Staphylococcus aureus clinical isolate and its isogenic agr and sarA mutants reveals global differences in comparison to the laboratory strain RN6390. Microbiology 2006; 152:3075-90; PMID:17005987; http://dx.doi. org/10.1099/mic.0.29033-0.
-
(2006)
Microbiology
, vol.152
, pp. 3075-3090
-
-
Cassat, J.1
Dunman, P.M.2
Murphy, E.3
Projan, S.J.4
Beenken, K.E.5
Palm, K.J.6
-
67
-
-
78349265764
-
Mutations in agr do not persist in natural populations of methicillin-resistant Staphylococcus aureus
-
PMID:20942648
-
Shopsin B, Eaton C, Wasserman GA, Mathema B, Adhikari RP, Agolory S, et al. Mutations in agr do not persist in natural populations of methicillin-resistant Staphylococcus aureus. J Infect Dis 2010; 202:1593-9; PMID:20942648; http://dx.doi.org/10.1086/656915.
-
(2010)
J Infect Dis
, vol.202
, pp. 1593-1599
-
-
Shopsin, B.1
Eaton, C.2
Wasserman, G.A.3
Mathema, B.4
Adhikari, R.P.5
Agolory, S.6
-
68
-
-
34249718889
-
The SaPIs: Mobile pathogenicity islands of Staphylococcus
-
PMID:17369699
-
Novick RP, Subedi A. The SaPIs: mobile pathogenicity islands of Staphylococcus. Chem Immunol Allergy 2007; 93:42-57; PMID:17369699; http://dx.doi. org/10.1159/000100857.
-
(2007)
Chem Immunol Allergy
, vol.93
, pp. 42-57
-
-
Novick, R.P.1
Subedi, A.2
-
69
-
-
77953478153
-
The phage-related chromosomal islands of Gram-positive bacteria
-
PMID:20634809
-
Novick RP, Christie GE, Penadés JR. The phage-related chromosomal islands of Gram-positive bacteria. Nat Rev Microbiol 2010; 8:541-51; PMID:20634809; http://dx.doi.org/10.1038/nrmicro2393.
-
(2010)
Nat Rev Microbiol
, vol.8
, pp. 541-551
-
-
Novick, R.P.1
Christie, G.E.2
Penadés, J.R.3
-
70
-
-
77955781555
-
Staphylococcus aureus toxin gene hitchhikes on a transferable antibiotic resistance element
-
PMID:21178414
-
Otto M. Staphylococcus aureus toxin gene hitchhikes on a transferable antibiotic resistance element. Virulence 2010; 1:49-51; PMID:21178414; http://dx.doi. org/10.4161/viru.1.1.10453.
-
(2010)
Virulence
, vol.1
, pp. 49-51
-
-
Otto, M.1
-
71
-
-
0036371843
-
Antisense RNAs in bacteria and their genetic elements
-
PMID:11931231
-
Wagner EG, Altuvia S, Romby P. Antisense RNAs in bacteria and their genetic elements. Adv Genet 2002; 46:361-98; PMID:11931231; http://dx.doi. org/10.1016/S0065-2660(02)46013-0.
-
(2002)
Adv Genet
, vol.46
, pp. 361-398
-
-
Wagner, E.G.1
Altuvia, S.2
Romby, P.3
-
72
-
-
34247099372
-
Regulatory mechanisms employed by cisencoded antisense RNAs
-
PMID:17387036
-
Brantl S. Regulatory mechanisms employed by cisencoded antisense RNAs. Curr Opin Microbiol 2007; 10:102-9; PMID:17387036; http://dx.doi. org/10.1016/j.mib.2007.03.012.
-
(2007)
Curr Opin Microbiol
, vol.10
, pp. 102-109
-
-
Brantl, S.1
-
73
-
-
0024473736
-
pT181 plasmid replication is regulated by a countertranscript-driven transcriptional attenuator
-
PMID:2478296
-
Novick RP, Iordanescu S, Projan SJ, Kornblum J, Edelman I. pT181 plasmid replication is regulated by a countertranscript-driven transcriptional attenuator. Cell 1989; 59:395-404; PMID:2478296; http:// dx.doi.org/10.1016/ 0092-8674(89)90300-0.
-
(1989)
Cell
, vol.59
, pp. 395-404
-
-
Novick, R.P.1
Iordanescu, S.2
Projan, S.J.3
Kornblum, J.4
Edelman, I.5
-
74
-
-
70049101505
-
Mobile genetic element-encoded cytolysin connects virulence to methicillin resistance in MRSA
-
PMID:19649313
-
Queck SY, Khan BA, Wang R, Bach TH, Kretschmer D, Chen L, et al. Mobile genetic element-encoded cytolysin connects virulence to methicillin resistance in MRSA. PLoS Pathog 2009; 5:1000533; PMID:19649313; http://dx.doi.org/10.1371/ journal. ppat.1000533.
-
(2009)
PLoS Pathog
, vol.5
, pp. 1000533
-
-
Queck, S.Y.1
Khan, B.A.2
Wang, R.3
Bach, T.H.4
Kretschmer, D.5
Chen, L.6
-
75
-
-
79952210598
-
Transcription and translation products of the cytolysin gene psm-mec on the mobile genetic element SCCmec regulate Staphylococcus aureus virulence
-
PMID:21304931
-
Kaito C, Saito Y, Nagano G, Ikuo M, Omae Y, Hanada Y, et al. Transcription and translation products of the cytolysin gene psm-mec on the mobile genetic element SCCmec regulate Staphylococcus aureus virulence. PLoS Pathog 2011; 7:1001267; PMID:21304931; http:// dx.doi.org/10.1371/journal.ppat. 1001267.
-
(2011)
PLoS Pathog
, vol.7
, pp. 1001267
-
-
Kaito, C.1
Saito, Y.2
Nagano, G.3
Ikuo, M.4
Omae, Y.5
Hanada, Y.6
-
76
-
-
77954665866
-
A Staphylococcus aureus small RNA is required for bacterial virulence and regulates the expression of an immuneevasion molecule
-
PMID:20532214
-
Chabelskaya S, Gaillot O, Felden B. A Staphylococcus aureus small RNA is required for bacterial virulence and regulates the expression of an immuneevasion molecule. PLoS Pathog 2010; 6:1000927; PMID:20532214; http://dx.doi.org/10.1371/journal. ppat.1000927.
-
(2010)
PLoS Pathog
, vol.6
, pp. 1000927
-
-
Chabelskaya, S.1
Gaillot, O.2
Felden, B.3
-
77
-
-
77951619556
-
Abundance of type I toxin-antitoxin systems in bacteria: Searches for new candidates and discovery of novel families
-
PMID:20156992
-
Fozo EM, Makarova KS, Shabalina SA, Yutin N, Koonin EV, Storz G. Abundance of type I toxin-antitoxin systems in bacteria: searches for new candidates and discovery of novel families. Nucleic Acids Res 2010; 38:3743-59; PMID:20156992; http://dx.doi. org/10.1093/nar/gkq054.
-
(2010)
Nucleic Acids Res
, vol.38
, pp. 3743-3759
-
-
Fozo, E.M.1
Makarova, K.S.2
Shabalina, S.A.3
Yutin, N.4
Koonin, E.V.5
Storz, G.6
-
78
-
-
70349946771
-
An RNA trap helps bacteria get the most out of chitosugars
-
PMID:19659640
-
Vogel J. An RNA trap helps bacteria get the most out of chitosugars. Mol Microbiol 2009; 73:737-41; PMID:19659640; http://dx.doi.org/10.1111/j.1365- 2958.2009.06806.x.
-
(2009)
Mol Microbiol
, vol.73
, pp. 737-741
-
-
Vogel, J.1
-
79
-
-
84859713761
-
When Ribonucleases Come into Play in Pathogens: A Survey of Gram- Positive Bacteria
-
In press
-
Jester B, Romby P, Lioliou E. When Ribonucleases Come Into Play in Pathogens: A Survey of Gram- Positive Bacteria. Int J Microbiol 2012; In press; http:// dx.doi.org/10.1155/2012/592196.
-
(2012)
Int J Microbiol
-
-
Jester, B.1
Romby, P.2
Lioliou, E.3
-
80
-
-
79960433506
-
Hfq and its constellation of RNA
-
PMID:21760622
-
Vogel J, Luisi BF. Hfq and its constellation of RNA. Nat Rev Microbiol 2011; 9:578-89; PMID:21760622; http://dx.doi.org/10.1038/nrmicro2615.
-
(2011)
Nat Rev Microbiol
, vol.9
, pp. 578-589
-
-
Vogel, J.1
Luisi, B.F.2
-
81
-
-
50849105413
-
Deep sequencing analysis of small noncoding RNA and mRNA targets of the global post-transcriptional regulator, Hfq
-
PMID:18725932
-
Sittka A, Lucchini S, Papenfort K, Sharma CM, Rolle K, Binnewies TT, et al. Deep sequencing analysis of small noncoding RNA and mRNA targets of the global post-transcriptional regulator, Hfq. PLoS Genet 2008; 4:1000163; PMID:18725932; http://dx.doi. org/10.1371/journal.pgen.1000163.
-
(2008)
PLoS Genet
, vol.4
, pp. 1000163
-
-
Sittka, A.1
Lucchini, S.2
Papenfort, K.3
Sharma, C.M.4
Rolle, K.5
Binnewies, T.T.6
-
82
-
-
0141644746
-
Global analysis of small RNA and mRNA targets of Hfq
-
PMID:14622403
-
Zhang A, Wassarman KM, Rosenow C, Tjaden BC, Storz G, Gottesman S. Global analysis of small RNA and mRNA targets of Hfq. Mol Microbiol 2003; 50:1111-24; PMID:14622403; http://dx.doi. org/10.1046/j.1365-2958.2003.03734.x.
-
(2003)
Mol Microbiol
, vol.50
, pp. 1111-1124
-
-
Zhang, A.1
Wassarman, K.M.2
Rosenow, C.3
Tjaden, B.C.4
Storz, G.5
Gottesman, S.6
-
83
-
-
79960623040
-
The Sm-like RNA chaperone Hfq mediates transcription antitermination at Rhodependent terminators
-
PMID:21673658
-
Rabhi M, Espéli O, Schwartz A, Cayrol B, Rahmouni AR, Arluison V, et al. The Sm-like RNA chaperone Hfq mediates transcription antitermination at Rhodependent terminators. EMBO J 2011; 30:2805- 16; PMID:21673658; http://dx.doi.org/10.1038/ emboj.2011.192.
-
(2011)
EMBO J
, vol.30
, pp. 2805-2816
-
-
Rabhi, M.1
Espéli, O.2
Schwartz, A.3
Cayrol, B.4
Rahmouni, A.R.5
Arluison, V.6
-
84
-
-
0036645689
-
Structures of the pleiotropic translational regulator Hfq and an Hfq-RNA complex: A bacterial Sm-like protein
-
PMID:12093755
-
Schumacher MA, Pearson RF, Møller T, Valentin- Hansen P, Brennan RG. Structures of the pleiotropic translational regulator Hfq and an Hfq-RNA complex: a bacterial Sm-like protein. EMBO J 2002; 21:3546- 56; PMID:12093755; http://dx.doi.org/10.1093/emboj/cdf322.
-
(2002)
EMBO J
, vol.21
, pp. 3546-3556
-
-
Schumacher, M.A.1
Pearson, R.F.2
Møller, T.3
Valentin-Hansen, P.4
Brennan, R.G.5
-
85
-
-
0242380623
-
Sm-like proteins in Eubacteria: The crystal structure of the Hfq protein from Escherichia coli
-
PMID:12853626
-
Sauter C, Basquin J, Suck D. Sm-like proteins in Eubacteria: the crystal structure of the Hfq protein from Escherichia coli. Nucleic Acids Res 2003; 31:4091- 8; PMID:12853626; http://dx.doi.org/10.1093/nar/ gkg480.
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 4091-4098
-
-
Sauter, C.1
Basquin, J.2
Suck, D.3
-
86
-
-
72049095718
-
Structure of Escherichia coli Hfq bound to polyriboadenylate RNA
-
PMID:19889981
-
Link TM, Valentin-Hansen P, Brennan RG. Structure of Escherichia coli Hfq bound to polyriboadenylate RNA. Proc Natl Acad Sci USA 2009; 106:19292- 7; PMID:19889981; http://dx.doi.org/10.1073/ pnas.0908744106.
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, pp. 19292-19297
-
-
Link, T.M.1
Valentin-Hansen, P.2
Brennan, R.G.3
-
87
-
-
34247109118
-
Hfq structure, function and ligand binding
-
PMID:17395525
-
Brennan RG, Link TM. Hfq structure, function and ligand binding. Curr Opin Microbiol 2007; 10:125- 33; PMID:17395525; http://dx.doi.org/10.1016/j. mib.2007.03.015.
-
(2007)
Curr Opin Microbiol
, vol.10
, pp. 125-133
-
-
Brennan, R.G.1
Link, T.M.2
-
88
-
-
80051973174
-
PolyU tail of rho-independent terminator of bacterial small RNAs is essential for Hfq action
-
PMID:21788484
-
Otaka H, Ishikawa H, Morita T, Aiba H, Poly U. PolyU tail of rho-independent terminator of bacterial small RNAs is essential for Hfq action. Proc Natl Acad Sci USA 2011; 108:13059-64; PMID:21788484; http://dx.doi.org/10. 1073/pnas.1107050108.
-
(2011)
Proc Natl Acad Sci USA
, vol.108
, pp. 13059-13064
-
-
Otaka, H.1
Ishikawa, H.2
Morita, T.3
Aiba, H.4
Poly, U.5
-
89
-
-
80051962605
-
Structural basis for RNA 3'-end recognition by Hfq
-
PMID:21737752
-
Sauer E, Weichenrieder O. Structural basis for RNA 3'-end recognition by Hfq. Proc Natl Acad Sci USA 2011; 108:13065-70; PMID:21737752; http://dx.doi. org/10.1073/pnas.1103420108.
-
(2011)
Proc Natl Acad Sci USA
, vol.108
, pp. 13065-13070
-
-
Sauer, E.1
Weichenrieder, O.2
-
90
-
-
75249100904
-
The role of Hfq in bacterial pathogens
-
PMID:20080057
-
Chao Y, Vogel J. The role of Hfq in bacterial pathogens. Curr Opin Microbiol 2010; 13:24-33; PMID:20080057; http://dx.doi.org/10.1016/j. mib.2010.01.001.
-
(2010)
Curr Opin Microbiol
, vol.13
, pp. 24-33
-
-
Chao, Y.1
Vogel, J.2
-
91
-
-
69949101616
-
On the facultative requirement of the bacterial RNA chaperone, Hfq
-
PMID:19733080
-
Jousselin A, Metzinger L, Felden B. On the facultative requirement of the bacterial RNA chaperone, Hfq. Trends Microbiol 2009; 17:399-405; PMID:19733080; http://dx.doi.org/10.1016/j.tim.2009.06.003.
-
(2009)
Trends Microbiol
, vol.17
, pp. 399-405
-
-
Jousselin, A.1
Metzinger, L.2
Felden, B.3
-
92
-
-
77958547418
-
Hfq is a global regulator that controls the pathogenicity of Staphylococcus aureus
-
PMID:20927372.
-
Liu Y, Wu N, Dong J, Gao Y, Zhang X, Mu C, et al. Hfq is a global regulator that controls the pathogenicity of Staphylococcus aureus. PLoS One 2010; 5:5; PMID:20927372.
-
(2010)
PLoS One
, vol.5
, pp. 5
-
-
Liu, Y.1
Wu, N.2
Dong, J.3
Gao, Y.4
Zhang, X.5
Mu, C.6
-
93
-
-
80052800958
-
Induction of attachment-independent biofilm formation and repression of Hfq expression by low-fluid- shear culture of Staphylococcus aureus
-
PMID:21803898
-
Castro SL, Nelman-Gonzalez M, Nickerson CA, Ott CM. Induction of attachment-independent biofilm formation and repression of Hfq expression by low-fluid- shear culture of Staphylococcus aureus. Appl Environ Microbiol 2011; 77:6368-78; PMID:21803898; http://dx.doi.org/10.1128/AEM.00175-11.
-
(2011)
Appl Environ Microbiol
, vol.77
, pp. 6368-6378
-
-
Castro, S.L.1
Nelman-Gonzalez, M.2
Nickerson, C.A.3
Ott, C.M.4
-
94
-
-
79959486063
-
A highly conserved protein of unknown function in Sinorhizobium meliloti affects sRNA regulation similar to Hfq
-
PMID:21325267
-
Pandey SP, Minesinger BK, Kumar J, Walker GC. A highly conserved protein of unknown function in Sinorhizobium meliloti affects sRNA regulation similar to Hfq. Nucleic Acids Res 2011; 39:4691- 708; PMID:21325267; http://dx.doi.org/10. 1093/nar/ gkr060.
-
(2011)
Nucleic Acids Res
, vol.39
, pp. 4691-4708
-
-
Pandey, S.P.1
Minesinger, B.K.2
Kumar, J.3
Walker, G.C.4
-
95
-
-
78649366670
-
Role of Escherichia coli YbeY, a highly conserved protein, in rRNA processing
-
PMID:20807199
-
Davies BW, Köhrer C, Jacob AI, Simmons LA, Zhu J, Aleman LM, et al. Role of Escherichia coli YbeY, a highly conserved protein, in rRNA processing. Mol Microbiol 2010; 78:506-18; PMID:20807199; http:// dx.doi.org/10.1111/j.1365- 2958.2010.07351.x.
-
(2010)
Mol Microbiol
, vol.78
, pp. 506-518
-
-
Davies, B.W.1
Köhrer, C.2
Jacob, A.I.3
Simmons, L.A.4
Zhu, J.5
Aleman, L.M.6
-
96
-
-
77956510722
-
The heat shock protein YbeY is required for optimal activity of the ribosomal subunit
-
PMID:20639334
-
Rasouly A, Davidovich C, Ron EZ. The heat shock protein YbeY is required for optimal activity of the ribosomal subunit. J Bacteriol 2010; 192:4592- 6; PMID:20639334; http://dx.doi.org/10.1128/ JB.00448-10.
-
(2010)
J Bacteriol
, vol.192
, pp. 4592-4596
-
-
Rasouly, A.1
Davidovich, C.2
Ron, E.Z.3
-
97
-
-
77954214431
-
Crystal structure and ligand binding of the MID domain of a eukaryotic Argonaute protein
-
PMID:20539312
-
Boland A, Tritschler F, Heimstädt S, Izaurralde E, Weichenrieder O. Crystal structure and ligand binding of the MID domain of a eukaryotic Argonaute protein. EMBO Rep 2010; 11:522-7; PMID:20539312; http:// dx.doi.org/10.1038/ embor.2010.81.
-
(2010)
EMBO Rep
, vol.11
, pp. 522-527
-
-
Boland, A.1
Tritschler, F.2
Heimstädt, S.3
Izaurralde, E.4
Weichenrieder, O.5
-
98
-
-
50149103524
-
The Bacillus subtilis iron-sparing response is mediated by a Fur-regulated small RNA and three small, basic proteins
-
PMID:18697947
-
Gaballa A, Antelmann H, Aguilar C, Khakh SK, Song KB, Smaldone GT, et al. The Bacillus subtilis iron-sparing response is mediated by a Fur-regulated small RNA and three small, basic proteins. Proc Natl Acad Sci USA 2008; 105:11927-32; PMID:18697947; http://dx.doi. org/10.1073/pnas.0711752105.
-
(2008)
Proc Natl Acad Sci USA
, vol.105
, pp. 11927-11932
-
-
Gaballa, A.1
Antelmann, H.2
Aguilar, C.3
Khakh, S.K.4
Song, K.B.5
Smaldone, G.T.6
-
99
-
-
33846927800
-
Ribonuclease revisited: Structural insights into ribonuclease III family enzymes
-
PMID:17194582
-
MacRae IJ, Doudna JA. Ribonuclease revisited: structural insights into ribonuclease III family enzymes. Curr Opin Struct Biol 2007; 17:138-45; PMID:17194582; http://dx.doi.org/10.1016/j.sbi.2006.12.002.
-
(2007)
Curr Opin Struct Biol
, vol.17
, pp. 138-145
-
-
MacRae, I.J.1
Doudna, J.A.2
-
100
-
-
79954583353
-
Regulated RNA stability in the Gram positives
-
PMID:21334965
-
Condon C, Bechhofer DH. Regulated RNA stability in the Gram positives. Curr Opin Microbiol 2011; 14:148-54; PMID:21334965; http://dx.doi. org/10.1016/j.mib.2011.01.010.
-
(2011)
Curr Opin Microbiol
, vol.14
, pp. 148-154
-
-
Condon, C.1
Bechhofer, D.H.2
-
101
-
-
58249088744
-
Staphylococcus aureus endoribonuclease III purification and properties
-
PMID:19161850
-
Chevalier C, Huntzinger E, Fechter P, Boisset S, Vandenesch F, Romby P, et al. Staphylococcus aureus endoribonuclease III purification and properties. Methods Enzymol 2008; 447:309-27; PMID:19161850; http://dx.doi.org/10.1016/ S0076- 6879(08)02216-7.
-
(2008)
Methods Enzymol
, vol.447
, pp. 309-327
-
-
Chevalier, C.1
Huntzinger, E.2
Fechter, P.3
Boisset, S.4
Vandenesch, F.5
Romby, P.6
-
102
-
-
79955608587
-
Analysis of Escherichia coli RNase E and RNase III activity in vivo using tiling microarrays
-
PMID:21149258
-
Stead MB, Marshburn S, Mohanty BK, Mitra J, Pena Castillo L, Ray D, et al. Analysis of Escherichia coli RNase E and RNase III activity in vivo using tiling microarrays. Nucleic Acids Res 2011; 39:3188-203; PMID:21149258; http://dx.doi.org/10.1093/nar/ gkq1242.
-
(2011)
Nucleic Acids Res
, vol.39
, pp. 3188-3203
-
-
Stead, M.B.1
Marshburn, S.2
Mohanty, B.K.3
Mitra, J.4
Pena Castillo, L.5
Ray, D.6
-
103
-
-
33847371621
-
Identification of new noncoding RNAs in Listeria monocytogenes and prediction of mRNA targets
-
PMID:17259222
-
Mandin P, Repoila F, Vergassola M, Geissmann T, Cossart P. Identification of new noncoding RNAs in Listeria monocytogenes and prediction of mRNA targets. Nucleic Acids Res 2007; 35:962-74; PMID:17259222; http://dx.doi.org/10.1093/ nar/gkl1096.
-
(2007)
Nucleic Acids Res
, vol.35
, pp. 962-974
-
-
Mandin, P.1
Repoila, F.2
Vergassola, M.3
Geissmann, T.4
Cossart, P.5
-
104
-
-
79957877444
-
The production of extracellular proteins is regulated by ribonuclease III via two different pathways in Staphylococcus aureus
-
PMID:21655230
-
Liu Y, Dong J, Wu N, Gao Y, Zhang X, Mu C, et al. The production of extracellular proteins is regulated by ribonuclease III via two different pathways in Staphylococcus aureus. PLoS One 2011; 6:20554; PMID:21655230; http://dx.doi.org/10.1371/journal. pone.0020554.
-
(2011)
PLoS One
, vol.6
, pp. 20554
-
-
Liu, Y.1
Dong, J.2
Wu, N.3
Gao, Y.4
Zhang, X.5
Mu, C.6
-
105
-
-
0023807526
-
Cloning, characterization and sequencing of an accessory gene regulator (agr) in Staphylococcus aureus
-
PMID:2457579.
-
Peng HL, Novick RP, Kreiswirth B, Kornblum J, Schlievert P. Cloning, characterization and sequencing of an accessory gene regulator (agr) in Staphylococcus aureus. J Bacteriol 1988; 170:4365-72; PMID:2457579.
-
(1988)
J Bacteriol
, vol.170
, pp. 4365-4372
-
-
Peng, H.L.1
Novick, R.P.2
Kreiswirth, B.3
Kornblum, J.4
Schlievert, P.5
-
106
-
-
0141860088
-
Coupled degradation of a small regulatory RNA and its mRNA targets in Escherichia coli
-
PMID:12975324
-
Massé E, Escorcia FE, Gottesman S. Coupled degradation of a small regulatory RNA and its mRNA targets in Escherichia coli. Genes Dev 2003; 17:2374- 83; PMID:12975324; http://dx.doi.org/10.1101/ gad.1127103.
-
(2003)
Genes Dev
, vol.17
, pp. 2374-2383
-
-
Massé, E.1
Escorcia, F.E.2
Gottesman, S.3
-
107
-
-
79956225645
-
Role of polynucleotide phosphorylase in sRNA function in Escherichia coli
-
PMID:21527671
-
De Lay N, Gottesman S. Role of polynucleotide phosphorylase in sRNA function in Escherichia coli. RNA 2011; 17:1172-89; PMID:21527671; http://dx.doi. org/10.1261/rna.2531211.
-
(2011)
RNA
, vol.17
, pp. 1172-1189
-
-
De Lay, N.1
Gottesman, S.2
-
108
-
-
33745838984
-
The RNA degradosome: Life in the fast lane of adaptive molecular evolution
-
PMID:16766188
-
Marcaida MJ, DePristo MA, Chandran V, Carpousis AJ, Luisi BF. The RNA degradosome: life in the fast lane of adaptive molecular evolution. Trends Biochem Sci 2006; 31:359-65; PMID:16766188; http://dx.doi. org/10.1016/j.tibs. 2006.05.005.
-
(2006)
Trends Biochem Sci
, vol.31
, pp. 359-365
-
-
Marcaida, M.J.1
DePristo, M.A.2
Chandran, V.3
Carpousis, A.J.4
Luisi, B.F.5
-
109
-
-
0037115876
-
The phylogenetic distribution of bacterial ribonucleases
-
PMID:12490701
-
Condon C, Putzer H. The phylogenetic distribution of bacterial ribonucleases. Nucleic Acids Res 2002; 30:5339-46; PMID:12490701; http://dx.doi. org/10.1093/nar/gkf691.
-
(2002)
Nucleic Acids Res
, vol.30
, pp. 5339-5346
-
-
Condon, C.1
Putzer, H.2
-
110
-
-
67650514021
-
Novel activities of glycolytic enzymes in Bacillus subtilis: Interactions with essential proteins involved in mRNA processing
-
PMID:19193632
-
Commichau FM, Rothe FM, Herzberg C, Wagner E, Hellwig D, Lehnik-Habrink M, et al. Novel activities of glycolytic enzymes in Bacillus subtilis: interactions with essential proteins involved in mRNA processing. Mol Cell Proteomics 2009; 8:1350-60; PMID:19193632; http://dx.doi.org/10.1074/mcp. M800546-MCP200.
-
(2009)
Mol Cell Proteomics
, vol.8
, pp. 1350-1360
-
-
Commichau, F.M.1
Rothe, F.M.2
Herzberg, C.3
Wagner, E.4
Hellwig, D.5
Lehnik-Habrink, M.6
-
111
-
-
36549032156
-
SPINE: A method for the rapid detection and analysis of protein-protein interactions in vivo
-
PMID:17994626
-
Herzberg C, Weidinger LA, Dörrbecker B, Hübner S, Stülke J, Commichau FM. SPINE: a method for the rapid detection and analysis of protein-protein interactions in vivo. Proteomics 2007; 7:4032- 5; PMID:17994626; http://dx.doi.org/10.1002/ pmic.200700491.
-
(2007)
Proteomics
, vol.7
, pp. 4032-4035
-
-
Herzberg, C.1
Weidinger, L.A.2
Dörrbecker, B.3
Hübner, S.4
Stülke, J.5
Commichau, F.M.6
-
112
-
-
77955351104
-
The RNA degradosome in Bacillus subtilis: Identification of CshA as the major RNA helicase in the multiprotein complex
-
PMID:20572937
-
Lehnik-Habrink M, Pförtner H, Rempeters L, Pietack N, Herzberg C, Stülke J. The RNA degradosome in Bacillus subtilis: identification of CshA as the major RNA helicase in the multiprotein complex. Mol Microbiol 2010; PMID:20572937; http://dx.doi. org/10.1111/j.1365-2958.2010.07264.x.
-
(2010)
Mol Microbiol
-
-
Lehnik-Habrink, M.1
Pförtner, H.2
Rempeters, L.3
Pietack, N.4
Herzberg, C.5
Stülke, J.6
-
113
-
-
34249101864
-
5′-to-3′ exoribonuclease activity in bacteria: Role of RNase J1 in rRNA maturation and 5' stability of mRNA
-
PMID:17512403
-
Mathy N, Bénard L, Pellegrini O, Daou R, Wen T, Condon C. 5′-to-3′ exoribonuclease activity in bacteria: role of RNase J1 in rRNA maturation and 5' stability of mRNA. Cell 2007; 129:681-92; PMID:17512403; http://dx.doi.org/10.1016/j.cell.2007.02.051.
-
(2007)
Cell
, vol.129
, pp. 681-692
-
-
Mathy, N.1
Bénard, L.2
Pellegrini, O.3
Daou, R.4
Wen, T.5
Condon, C.6
-
114
-
-
70450222923
-
RNase Y, a novel endoribonuclease, initiates riboswitch turnover in Bacillus subtilis
-
PMID:19779461
-
Shahbabian K, Jamalli A, Zig L, Putzer H. RNase Y, a novel endoribonuclease, initiates riboswitch turnover in Bacillus subtilis. EMBO J 2009; 28:3523- 33; PMID:19779461; http://dx.doi.org/10.1038/ emboj.2009.283.
-
(2009)
EMBO J
, vol.28
, pp. 3523-3533
-
-
Shahbabian, K.1
Jamalli, A.2
Zig, L.3
Putzer, H.4
-
115
-
-
80053594659
-
RNase Y in Bacillus subtilis: A Natively disordered protein that is the functional equivalent of RNase E from Escherichia coli
-
PMID:21803996
-
Lehnik-Habrink M, Newman J, Rothe FM, Solovyova AS, Rodrigues C, Herzberg C, et al. RNase Y in Bacillus subtilis: a Natively disordered protein that is the functional equivalent of RNase E from Escherichia coli. J Bacteriol 2011; 193:5431-41; PMID:21803996; http://dx.doi.org/10.1128/JB.05500-11.
-
(2011)
J Bacteriol
, vol.193
, pp. 5431-5441
-
-
Lehnik-Habrink, M.1
Newman, J.2
Rothe, F.M.3
Solovyova, A.S.4
Rodrigues, C.5
Herzberg, C.6
-
116
-
-
35548995356
-
The RNA degradosome of Escherichia coli: An mRNA-degrading machine assembled on RNase E
-
PMID:17447862
-
Carpousis AJ. The RNA degradosome of Escherichia coli: an mRNA-degrading machine assembled on RNase E. Annu Rev Microbiol 2007; 61:71-87; PMID:17447862; http://dx.doi.org/10.1146/annurev. micro.61.080706.093440.
-
(2007)
Annu Rev Microbiol
, vol.61
, pp. 71-87
-
-
Carpousis, A.J.1
-
117
-
-
18444385070
-
Silkworm pathogenic bacteria infection model for identification of novel virulence genes
-
PMID:15853881
-
Kaito C, Kurokawa K, Matsumoto Y, Terao Y, Kawabata S, Hamada S, et al. Silkworm pathogenic bacteria infection model for identification of novel virulence genes. Mol Microbiol 2005; 56:934-44; PMID:15853881; http://dx.doi.org/10.1111/j.1365-2958.2005.04596.x.
-
(2005)
Mol Microbiol
, vol.56
, pp. 934-944
-
-
Kaito, C.1
Kurokawa, K.2
Matsumoto, Y.3
Terao, Y.4
Kawabata, S.5
Hamada, S.6
-
118
-
-
38349167848
-
Phosphodiesterase activity of CvfA is required for virulence in Staphylococcus aureus
-
PMID:17951247
-
Nagata M, Kaito C, Sekimizu K. Phosphodiesterase activity of CvfA is required for virulence in Staphylococcus aureus. J Biol Chem 2008; 283:2176- 84; PMID:17951247; http://dx.doi.org/10.1074/jbc. M705309200.
-
(2008)
J Biol Chem
, vol.283
, pp. 2176-2184
-
-
Nagata, M.1
Kaito, C.2
Sekimizu, K.3
-
119
-
-
0035929121
-
Identification of critical staphylococcal genes using conditional phenotypes generated by antisense RNA
-
PMID:11567142
-
Ji Y, Zhang B, Van SF, Horn, Warren P, Woodnutt G, et al. Identification of critical staphylococcal genes using conditional phenotypes generated by antisense RNA. Science 2001; 293:2266-9; PMID:11567142; http:// dx.doi.org/10.1126/science.1063566.
-
(2001)
Science
, vol.293
, pp. 2266-2269
-
-
Ji, Y.1
Zhang, B.2
Van, S.F.3
Horn4
Warren, P.5
Woodnutt, G.6
-
120
-
-
0034614360
-
The structure of ribonuclease P protein from Staphylococcus aureus reveals a unique binding site for single-stranded RNA
-
PMID:10623511
-
Spitzfaden C, Nicholson N, Jones JJ, Guth S, Lehr R, Prescott CD, et al. The structure of ribonuclease P protein from Staphylococcus aureus reveals a unique binding site for single-stranded RNA. J Mol Biol 2000; 295:105-15; PMID:10623511; http://dx.doi. org/10.1006/jmbi.1999.3341.
-
(2000)
J Mol Biol
, vol.295
, pp. 105-115
-
-
Spitzfaden, C.1
Nicholson, N.2
Jones, J.J.3
Guth, S.4
Lehr, R.5
Prescott, C.D.6
-
121
-
-
79952233550
-
Small molecule inhibitors of Staphylococcus aureus RnpA alter cellular mRNA turnover, exhibit antimicrobial activity and attenuate pathogenesis
-
PMID:21347352
-
Olson PD, Kuechenmeister LJ, Anderson KL, Daily S, Beenken KE, Roux CM, et al. Small molecule inhibitors of Staphylococcus aureus RnpA alter cellular mRNA turnover, exhibit antimicrobial activity and attenuate pathogenesis. PLoS Pathog 2011; 7:1001287; PMID:21347352; http://dx.doi.org/10.1371/journal. ppat.1001287.
-
(2011)
PLoS Pathog
, vol.7
, pp. 1001287
-
-
Olson, P.D.1
Kuechenmeister, L.J.2
Anderson, K.L.3
Daily, S.4
Beenken, K.E.5
Roux, C.M.6
|