-
1
-
-
0037993832
-
Transition metal speciation in the cell: Insights from the chemistry of metal ion receptors
-
Finney LA, O'Halloran TV. Transition metal speciation in the cell: insights from the chemistry of metal ion receptors. Science 2003; 300:931-6.
-
(2003)
Science
, vol.300
, pp. 931-936
-
-
Finney, L.A.1
O'Halloran, T.V.2
-
2
-
-
34547229278
-
Metal sensor proteins: Nature's metalloregulated allosteric switches
-
Giedroc DP, Arunkumar AI. Metal sensor proteins: nature's metalloregulated allosteric switches. Dalton Trans 2007; 3107-20.
-
(2007)
Dalton Trans
, pp. 3107-3120
-
-
Giedroc, D.P.1
Arunkumar, A.I.2
-
3
-
-
34250651738
-
Small RNA regulators and the bacterial response to stress
-
Gottesman S, McCullen CA, Guillier M, Vanderpool CK, Majdalani N, Benhammou J, et al. Small RNA regulators and the bacterial response to stress. Cold Spring Harb Symp Quant Biol 2006; 71:1-11.
-
(2006)
Cold Spring Harb Symp Quant Biol
, vol.71
, pp. 1-11
-
-
Gottesman, S.1
McCullen, C.A.2
Guillier, M.3
Vanderpool, C.K.4
Majdalani, N.5
Benhammou, J.6
-
4
-
-
58149139033
-
A rough guide to the non-coding RNA world of Salmonella
-
Vogel J. A rough guide to the non-coding RNA world of Salmonella. Mol Microbiol 2009; 71:1-11.
-
(2009)
Mol Microbiol
, vol.71
, pp. 1-11
-
-
Vogel, J.1
-
6
-
-
50149103524
-
The Bacillus subtilis iron-sparing response is mediated by a Fur-regulated small RNA and three small, basic proteins
-
Gaballa A, Antelmann H, Aguilar C, Khakh SK, Song KB, Smaldone GT, Helmann JD. The Bacillus subtilis iron-sparing response is mediated by a Fur-regulated small RNA and three small, basic proteins. Proc Natl Acad Sci USA 2008; 105:11927-32.
-
(2008)
Proc Natl Acad Sci USA
, vol.105
, pp. 11927-11932
-
-
Gaballa, A.1
Antelmann, H.2
Aguilar, C.3
Khakh, S.K.4
Song, K.B.5
Smaldone, G.T.6
Helmann, J.D.7
-
7
-
-
27144527479
-
Regulation of bacterial gene expression by riboswitches
-
Winkler WC, Breaker RR. Regulation of bacterial gene expression by riboswitches. Annu Rev Microbiol 2005; 59:487-517.
-
(2005)
Annu Rev Microbiol
, vol.59
, pp. 487-517
-
-
Winkler, W.C.1
Breaker, R.R.2
-
8
-
-
18744396047
-
Sensing small molecules by nascent RNA: A mechanism to control transcription in bacteria
-
Mironov AS, Gusarov I, Rafikov R, Lopez LE, Shatalin K, Kreneva RA, et al. Sensing small molecules by nascent RNA: a mechanism to control transcription in bacteria. Cell 2002; 111:747-56.
-
(2002)
Cell
, vol.111
, pp. 747-756
-
-
Mironov, A.S.1
Gusarov, I.2
Rafikov, R.3
Lopez, L.E.4
Shatalin, K.5
Kreneva, R.A.6
-
10
-
-
0037453069
-
Transcription termination control of the S box system: Direct measurement of S-adenosylmethionine by the leader RNA
-
McDaniel BA, Grundy FJ, Artsimovitch I, Henkin TM. Transcription termination control of the S box system: direct measurement of S-adenosylmethionine by the leader RNA. Proc Natl Acad Sci USA 2003; 100:3083-8.
-
(2003)
Proc Natl Acad Sci USA
, vol.100
, pp. 3083-3088
-
-
McDaniel, B.A.1
Grundy, F.J.2
Artsimovitch, I.3
Henkin, T.M.4
-
11
-
-
0038476616
-
The riboswitch-mediated control of sulfur metabolism in bacteria
-
Epshtein V, Mironov AS, Nudler E. The riboswitch-mediated control of sulfur metabolism in bacteria. Proc Natl Acad Sci USA 2003; 100:5052-6.
-
(2003)
Proc Natl Acad Sci USA
, vol.100
, pp. 5052-5056
-
-
Epshtein, V.1
Mironov, A.S.2
Nudler, E.3
-
12
-
-
0042320361
-
An mRNA structure that controls gene expression by binding S-adenosylmethionine
-
Winkler WC, Nahvi A, Sudarsan N, Barrick JE, Breaker RR. An mRNA structure that controls gene expression by binding S-adenosylmethionine. Nat Struct Biol 2003; 10:701-7.
-
(2003)
Nat Struct Biol
, vol.10
, pp. 701-707
-
-
Winkler, W.C.1
Nahvi, A.2
Sudarsan, N.3
Barrick, J.E.4
Breaker, R.R.5
-
13
-
-
0036753365
-
Genetic control by a metabolite binding mRNA
-
Nahvi A, Sudarsan N, Ebert MS, Zou X, Brown KL, Breaker RR. Genetic control by a metabolite binding mRNA. Chem Biol 2002; 9:1043.
-
(2002)
Chem Biol
, vol.9
, pp. 1043
-
-
Nahvi, A.1
Sudarsan, N.2
Ebert, M.S.3
Zou, X.4
Brown, K.L.5
Breaker, R.R.6
-
14
-
-
0037206833
-
Thiamine derivatives bind messenger RNAs directly to regulate bacterial gene expression
-
Winkler W, Nahvi A, Breaker RR. Thiamine derivatives bind messenger RNAs directly to regulate bacterial gene expression. Nature 2002; 419:952-6.
-
(2002)
Nature
, vol.419
, pp. 952-956
-
-
Winkler, W.1
Nahvi, A.2
Breaker, R.R.3
-
15
-
-
0038210214
-
Riboswitches control fundamental biochemical pathways in Bacillus subtilis and other bacteria
-
Mandal M, Boese B, Barrick JE, Winkler WC, Breaker RR. Riboswitches control fundamental biochemical pathways in Bacillus subtilis and other bacteria. Cell 2003; 113:577-86.
-
(2003)
Cell
, vol.113
, pp. 577-586
-
-
Mandal, M.1
Boese, B.2
Barrick, J.E.3
Winkler, W.C.4
Breaker, R.R.5
-
16
-
-
34247181095
-
A riboswitch selective for the queuosine precursor preQ1 contains an unusually small aptamer domain
-
Roth A, Winkler WC, Regulski EE, Lee BW, Lim J, Jona I, et al. A riboswitch selective for the queuosine precursor preQ1 contains an unusually small aptamer domain. Nat Struct Mol Biol 2007; 14:308-17.
-
(2007)
Nat Struct Mol Biol
, vol.14
, pp. 308-317
-
-
Roth, A.1
Winkler, W.C.2
Regulski, E.E.3
Lee, B.W.4
Lim, J.5
Jona, I.6
-
17
-
-
5044234799
-
A glycine-dependent riboswitch that uses cooperative binding to control gene expression
-
Mandal M, Lee M, Barrick JE, Weinberg Z, Emilsson GM, Ruzzo WL, Breaker RR. A glycine-dependent riboswitch that uses cooperative binding to control gene expression. Science 2004; 306:275-9.
-
(2004)
Science
, vol.306
, pp. 275-279
-
-
Mandal, M.1
Lee, M.2
Barrick, J.E.3
Weinberg, Z.4
Emilsson, G.M.5
Ruzzo, W.L.6
Breaker, R.R.7
-
18
-
-
0242298623
-
An mRNA structure in bacteria that controls gene expression by binding lysine
-
Sudarsan N, Wickiser JK, Nakamura S, Ebert MS, Breaker RR. An mRNA structure in bacteria that controls gene expression by binding lysine. Genes Dev 2003; 17:2688-97.
-
(2003)
Genes Dev
, vol.17
, pp. 2688-2697
-
-
Sudarsan, N.1
Wickiser, J.K.2
Nakamura, S.3
Ebert, M.S.4
Breaker, R.R.5
-
19
-
-
47749152941
-
-
Sudarsan N, Lee ER, Weinberg Z, Moy RH, Kim JN, Link KH, Breaker RR. Riboswitches in eubacteria sense the second messenger cyclic di-GMP. Science 2008; 321:411-3.
-
Sudarsan N, Lee ER, Weinberg Z, Moy RH, Kim JN, Link KH, Breaker RR. Riboswitches in eubacteria sense the second messenger cyclic di-GMP. Science 2008; 321:411-3.
-
-
-
-
21
-
-
34548253368
-
Structure and mechanism of a metal-sensing regulatory RNA
-
Dann CE, 3rd, Wakeman CA, Sieling CL, Baker SC, Irnov I, Winkler WC. Structure and mechanism of a metal-sensing regulatory RNA. Cell 2007; 130:878-92.
-
(2007)
Cell
, vol.130
, pp. 878-892
-
-
Dann 3rd, C.E.1
Wakeman, C.A.2
Sieling, C.L.3
Baker, S.C.4
Irnov, I.5
Winkler, W.C.6
-
24
-
-
0031920998
-
Microbial magnesium transport: Unusual transporters searching for identity
-
Smith RL, Maguire ME. Microbial magnesium transport: unusual transporters searching for identity. Mol Microbiol 1998; 28:217-26.
-
(1998)
Mol Microbiol
, vol.28
, pp. 217-226
-
-
Smith, R.L.1
Maguire, M.E.2
-
25
-
-
33744489098
-
Magnesium transporters: Properties, regulation and structure
-
Maguire ME. Magnesium transporters: properties, regulation and structure. Front Biosci 2006; 11:3149-63.
-
(2006)
Front Biosci
, vol.11
, pp. 3149-3163
-
-
Maguire, M.E.1
-
27
-
-
33748031116
-
2+ homeostasis and the CorA translocation cycle
-
2+ homeostasis and the CorA translocation cycle. EMBO J 2006; 25:3762-73.
-
(2006)
EMBO J
, vol.25
, pp. 3762-3773
-
-
Payandeh, J.1
Pai, E.F.2
-
29
-
-
0029671310
-
2+ as an extracellular signal: Environmental regulation of Salmonella virulence
-
2+ as an extracellular signal: environmental regulation of Salmonella virulence. Cell 1996; 84:165-74.
-
(1996)
Cell
, vol.84
, pp. 165-174
-
-
Garcia Vescovi, E.1
Soncini, F.C.2
Groisman, E.A.3
-
30
-
-
23744504984
-
Recognition of antimicrobial peptides by a bacterial sensor kinase
-
Bader MW, Sanowar S, Daley ME, Schneider AR, Cho U, Xu W, et al. Recognition of antimicrobial peptides by a bacterial sensor kinase. Cell 2005; 122:461-72.
-
(2005)
Cell
, vol.122
, pp. 461-472
-
-
Bader, M.W.1
Sanowar, S.2
Daley, M.E.3
Schneider, A.R.4
Cho, U.5
Xu, W.6
-
31
-
-
55949084011
-
The PhoQ/PhoP regulatory network of Salmonella enterica
-
Kato A, Groisman EA. The PhoQ/PhoP regulatory network of Salmonella enterica. Adv Exp Med Biol 2008; 631:7-21.
-
(2008)
Adv Exp Med Biol
, vol.631
, pp. 7-21
-
-
Kato, A.1
Groisman, E.A.2
-
32
-
-
14544307890
-
Dissecting the PhoP regulatory network of Escherichia coli and Salmonella enterica
-
Zwir I, Shin D, Kato A, Nishino K, Latifi T, Solomon F, et al. Dissecting the PhoP regulatory network of Escherichia coli and Salmonella enterica. Proc Natl Acad Sci USA 2005; 102:2862-7.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 2862-2867
-
-
Zwir, I.1
Shin, D.2
Kato, A.3
Nishino, K.4
Latifi, T.5
Solomon, F.6
-
33
-
-
0035105303
-
The pleiotropic two-component regulatory system PhoP-PhoQ
-
Groisman EA. The pleiotropic two-component regulatory system PhoP-PhoQ. J Bacteriol 2001; 183:1835-42.
-
(2001)
J Bacteriol
, vol.183
, pp. 1835-1842
-
-
Groisman, E.A.1
-
34
-
-
34249817554
-
MgtC: A key player in intramacrophage survival
-
Alix E, Blanc-Potard AB. MgtC: a key player in intramacrophage survival. Trends Microbiol 2007; 15:252-6.
-
(2007)
Trends Microbiol
, vol.15
, pp. 252-256
-
-
Alix, E.1
Blanc-Potard, A.B.2
-
36
-
-
39649112587
-
Regulation of magnesium homeostasis in Salmonella: Mg(2+) targets the mgtA transcript for degradation by RNase E
-
Spinelli SV, Pontel LB, Garcia Vescovi E, Soncini FC. Regulation of magnesium homeostasis in Salmonella: Mg(2+) targets the mgtA transcript for degradation by RNase E. FEMS Microbiol Lett 2008; 280:226-34.
-
(2008)
FEMS Microbiol Lett
, vol.280
, pp. 226-234
-
-
Spinelli, S.V.1
Pontel, L.B.2
Garcia Vescovi, E.3
Soncini, F.C.4
-
37
-
-
69349104590
-
Multiple Metal-Binding Cores Are Required for Metalloregulation by M-box Riboswitch RNAs
-
Wakeman CA, Ramesh A, Winkler WC. Multiple Metal-Binding Cores Are Required for Metalloregulation by M-box Riboswitch RNAs. J Mol Biol 2009.
-
(2009)
J Mol Biol
-
-
Wakeman, C.A.1
Ramesh, A.2
Winkler, W.C.3
-
38
-
-
48249104039
-
Riboswitches: Emerging themes in RNA structure and function
-
Montange RK, Batey RT. Riboswitches: emerging themes in RNA structure and function. Annu Rev Biophys 2008; 37:117-33.
-
(2008)
Annu Rev Biophys
, vol.37
, pp. 117-133
-
-
Montange, R.K.1
Batey, R.T.2
-
39
-
-
53049094260
-
Crystal structure of the lysine riboswitch regulatory mRNA element
-
Garst AD, Heroux A, Rambo RP, Batey RT. Crystal structure of the lysine riboswitch regulatory mRNA element. J Biol Chem 2008; 283:22347-51.
-
(2008)
J Biol Chem
, vol.283
, pp. 22347-22351
-
-
Garst, A.D.1
Heroux, A.2
Rambo, R.P.3
Batey, R.T.4
-
40
-
-
33845971464
-
Structural transitions and thermodynamics of a glycine-dependent riboswitch from Vibrio cholerae
-
Lipfert J, Das R, Chu VB, Kudaravalli M, Boyd N, Herschlag D, Doniach S. Structural transitions and thermodynamics of a glycine-dependent riboswitch from Vibrio cholerae. J Mol Biol 2007; 365:1393-406.
-
(2007)
J Mol Biol
, vol.365
, pp. 1393-1406
-
-
Lipfert, J.1
Das, R.2
Chu, V.B.3
Kudaravalli, M.4
Boyd, N.5
Herschlag, D.6
Doniach, S.7
-
41
-
-
33745635350
-
Structural basis for gene regulation by a thiamine pyrophosphate-sensing riboswitch
-
Serganov A, Polonskaia A, Phan AT, Breaker RR, Patel DJ. Structural basis for gene regulation by a thiamine pyrophosphate-sensing riboswitch. Nature 2006; 441:1167-71.
-
(2006)
Nature
, vol.441
, pp. 1167-1171
-
-
Serganov, A.1
Polonskaia, A.2
Phan, A.T.3
Breaker, R.R.4
Patel, D.J.5
-
42
-
-
33744469562
-
Structure of the eukaryotic thiamine pyrophosphate riboswitch with its regulatory ligand
-
Thore S, Leibundgut M, Ban N. Structure of the eukaryotic thiamine pyrophosphate riboswitch with its regulatory ligand. Science 2006; 312:1208-11.
-
(2006)
Science
, vol.312
, pp. 1208-1211
-
-
Thore, S.1
Leibundgut, M.2
Ban, N.3
-
43
-
-
33846279049
-
Structural investigation of the GlmS ribozyme bound to Its catalytic cofactor
-
Cochrane JC, Lipchock SV, Strobel SA. Structural investigation of the GlmS ribozyme bound to Its catalytic cofactor. Chem Biol 2007; 14:97-105.
-
(2007)
Chem Biol
, vol.14
, pp. 97-105
-
-
Cochrane, J.C.1
Lipchock, S.V.2
Strobel, S.A.3
-
44
-
-
62249156218
-
Coenzyme recognition and gene regulation by a flavin mononucleotide riboswitch
-
Serganov A, Huang L, Patel DJ. Coenzyme recognition and gene regulation by a flavin mononucleotide riboswitch. Nature 2009; 458:233-7.
-
(2009)
Nature
, vol.458
, pp. 233-237
-
-
Serganov, A.1
Huang, L.2
Patel, D.J.3
|