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Volumn 12, Issue 1, 2012, Pages

The evolution of Dscam genes across the arthropods

Author keywords

Alternative splicing; Co ortholog; Dscam like; Gene duplication; Ortholog; Paralog

Indexed keywords

BIOINFORMATICS; CELL ORGANELLE; CRUSTACEAN; FLY; GENE; GENETIC ANALYSIS; GENOME; IMMUNE SYSTEM; MARKOV CHAIN; MOLECULAR ANALYSIS; NUMERICAL MODEL; PHENOTYPE; PHYLOGENETICS; PROTEIN; SPIDER;

EID: 84859644874     PISSN: None     EISSN: 14712148     Source Type: Journal    
DOI: 10.1186/1471-2148-12-53     Document Type: Article
Times cited : (48)

References (84)
  • 1
    • 0032509302 scopus 로고    scopus 로고
    • Genome Sequence of the Nematode C. elegans: A Platform for Investigating Biology
    • Genome Sequence of the Nematode C. 9851916
    • Genome Sequence of the Nematode C. elegans: A Platform for Investigating Biology. C. elegans Sequencing Consortium, Science 1998 282 2012 2018 9851916
    • (1998) Science , vol.282 , pp. 2012-2018
  • 2
    • 7244245762 scopus 로고    scopus 로고
    • Finishing the euchromatic sequence of the human genome
    • International Human Genome Sequencing Consortium, 10.1038/nature03001 15496913
    • Finishing the euchromatic sequence of the human genome. International Human Genome Sequencing Consortium, Nature 2004 431 931 945 10.1038/nature03001 15496913
    • (2004) Nature , vol.431 , pp. 931-945
  • 3
    • 0013394889 scopus 로고    scopus 로고
    • Mechanisms of alternative pre-messenger RNA splicing
    • 10.1146/annurev.biochem.72.121801.161720 12626338
    • Mechanisms of alternative pre-messenger RNA splicing. Black DL, Annu Rev Biochem 2003 72 291 336 10.1146/annurev.biochem.72.121801.161720 12626338
    • (2003) Annu Rev Biochem , vol.72 , pp. 291-336
    • Black, D.L.1
  • 4
    • 33745899048 scopus 로고    scopus 로고
    • Alternative splicing: New insights from global analyses
    • 10.1016/j.cell.2006.06.023 16839875
    • Alternative splicing: new insights from global analyses. Blencowe BJ, Cell 2006 126 1 37 47 10.1016/j.cell.2006.06.023 16839875
    • (2006) Cell , vol.126 , Issue.1 , pp. 37-47
    • Blencowe, B.J.1
  • 5
    • 75849145292 scopus 로고    scopus 로고
    • Expansion of the eukaryotic proteome by alternative splicing
    • 10.1038/nature08909 20110989
    • Expansion of the eukaryotic proteome by alternative splicing. Nilsen TW, Graveley BR, Nature 2010 463 457 463 10.1038/nature08909 20110989
    • (2010) Nature , vol.463 , pp. 457-463
    • Nilsen, T.W.1    Graveley, B.R.2
  • 6
    • 0034625260 scopus 로고    scopus 로고
    • Drosophila Dscam is an axon guidance receptor exhibiting extraordinary molecular diversity
    • 10.1016/S0092-8674(00)80878-8 10892653
    • Drosophila Dscam is an axon guidance receptor exhibiting extraordinary molecular diversity. Schmucker D, Clemens JC, Shu H, Worby CA, Xiao J, Muda M, Dixon JE, Zipursky SL, Cell 2000 101 671 684 10.1016/S0092-8674(00)80878-8 10892653
    • (2000) Cell , vol.101 , pp. 671-684
    • Schmucker, D.1    Clemens, J.C.2    Shu, H.3    Worby, C.A.4    Xiao, J.5    Muda, M.6    Dixon, J.E.7    Zipursky, S.L.8
  • 7
    • 4444288626 scopus 로고    scopus 로고
    • Transmembrane/juxtamembrane domain-dependent Dscam distribution and function during mushroom body neuronal morphogenesis
    • 10.1016/j.neuron.2004.06.033 15339648
    • Transmembrane/juxtamembrane domain-dependent Dscam distribution and function during mushroom body neuronal morphogenesis. Wang J, Ma X, Yang JS, Zheng X, Zugates CT, Lee C-HJ, Lee T, Neuron 2004 43 663 672 10.1016/j.neuron.2004.06.033 15339648
    • (2004) Neuron , vol.43 , pp. 663-672
    • Wang, J.1    Ma, X.2    Yang, J.S.3    Zheng, X.4    Zugates, C.T.5    Lee, C.-H.6    Lee, T.7
  • 8
    • 60749137641 scopus 로고    scopus 로고
    • Endodomain diversity in the Drosophila Dscam and its roles in neuronal morphogenesis
    • 10.1523/JNEUROSCI.5743-08.2009 19211897
    • Endodomain diversity in the Drosophila Dscam and its roles in neuronal morphogenesis. Yu H-H, Yang JS, Wang J, Huang Y, Lee T, J Neurosci 2009 29 1904 1914 10.1523/JNEUROSCI.5743-08.2009 19211897
    • (2009) J Neurosci , vol.29 , pp. 1904-1914
    • Yu, H.-H.1    Yang, J.S.2    Wang, J.3    Huang, Y.4    Lee, T.5
  • 11
    • 58849147630 scopus 로고    scopus 로고
    • Dscam and DSCAM: Complex genes in simple animals, complex animals yet simple genes
    • 10.1101/gad.1752909 19171779
    • Dscam and DSCAM: complex genes in simple animals, complex animals yet simple genes. Schmucker D, Chen B, Genes Dev 2009 23 147 156 10.1101/gad.1752909 19171779
    • (2009) Genes Dev , vol.23 , pp. 147-156
    • Schmucker, D.1    Chen, B.2
  • 12
    • 0037461755 scopus 로고    scopus 로고
    • Axonal targeting of olfactory receptor neurons in Drosophila is controlled by Dscam
    • 10.1016/S0896-6273(02)01183-2 12546818
    • Axonal targeting of olfactory receptor neurons in Drosophila is controlled by Dscam. Hummel T, Vasconcelos ML, Clemens JC, Fishilevich Y, Vosshall LB, Zipursky SL, Neuron 2003 37 221 231 10.1016/S0896-6273(02)01183-2 12546818
    • (2003) Neuron , vol.37 , pp. 221-231
    • Hummel, T.1    Vasconcelos, M.L.2    Clemens, J.C.3    Fishilevich, Y.4    Vosshall, L.B.5    Zipursky, S.L.6
  • 13
    • 34548612755 scopus 로고    scopus 로고
    • Dscam diversity is essential for neuronal wiring and self-recognition
    • 10.1038/nature06099 17851526
    • Dscam diversity is essential for neuronal wiring and self-recognition. Hattori D, Demir E, Kim HW, Viragh E, Zipursky SL, Dickson BJ, Nature 2007 449 223 227 10.1038/nature06099 17851526
    • (2007) Nature , vol.449 , pp. 223-227
    • Hattori, D.1    Demir, E.2    Kim, H.W.3    Viragh, E.4    Zipursky, S.L.5    Dickson, B.J.6
  • 15
    • 34548603928 scopus 로고    scopus 로고
    • A vast repertoire of Dscam binding specificities arises from modular interactions of variable Ig domains
    • 10.1016/j.cell.2007.08.026 17889655
    • A vast repertoire of Dscam binding specificities arises from modular interactions of variable Ig domains. Wojtowicz WM, Wu W, Andre I, Qian B, Baker D, Zipursky SL, Cell 2007 130 1134 1145 10.1016/j.cell.2007.08.026 17889655
    • (2007) Cell , vol.130 , pp. 1134-1145
    • Wojtowicz, W.M.1    Wu, W.2    Andre, I.3    Qian, B.4    Baker, D.5    Zipursky, S.L.6
  • 16
    • 70349705910 scopus 로고    scopus 로고
    • Robust discrimination between self and non-self neurites requires thousands of Dscam1 isoforms
    • 10.1038/nature08431 19794492
    • Robust discrimination between self and non-self neurites requires thousands of Dscam1 isoforms. Hattori D, Chen Y, Matthews BJ, Salwinski L, Sabatti C, Grueber WB, Zipursky SL, Nature 2009 461 644 648 10.1038/nature08431 19794492
    • (2009) Nature , vol.461 , pp. 644-648
    • Hattori, D.1    Chen, Y.2    Matthews, B.J.3    Salwinski, L.4    Sabatti, C.5    Grueber, W.B.6    Zipursky, S.L.7
  • 18
    • 33745874084 scopus 로고    scopus 로고
    • AgDscam, a hypervariable immunoglobulin domain-containing receptor of the Anopheles gambiae innate immune system
    • 10.1371/journal.pbio.0040229 16774454
    • AgDscam, a hypervariable immunoglobulin domain-containing receptor of the Anopheles gambiae innate immune system. Dong Y, Taylor HE, Dimopoulos G, PLoS Biol 2006 4 229 10.1371/journal.pbio.0040229 16774454
    • (2006) PLoS Biol , vol.4 , pp. 5229
    • Dong, Y.1    Taylor, H.E.2    Dimopoulos, G.3
  • 19
    • 79958061238 scopus 로고    scopus 로고
    • Alternative splicing of the Anopheles gambiae Dscam gene in diverse Plasmodium falciparum infections
    • 10.1186/1475-2875-10-156 21651790
    • Alternative splicing of the Anopheles gambiae Dscam gene in diverse Plasmodium falciparum infections. Smith P, Mwangi J, Afrane Y, Yan G, Obbard D, Ranford-Cartwright L, Little T, Malar J 2011 10 156 10.1186/1475-2875-10-156 21651790
    • (2011) Malar J , vol.10 , pp. 156
    • Smith, P.1    Mwangi, J.2    Afrane, Y.3    Yan, G.4    Obbard, D.5    Ranford-Cartwright, L.6    Little, T.7
  • 21
    • 34548782741 scopus 로고    scopus 로고
    • Two in one: Dual function of an invertebrate antigen receptor
    • 10.1038/ni1007-1031 17878910
    • Two in one: dual function of an invertebrate antigen receptor. Boehm T, Nat Immunol 2007 8 1031 1033 10.1038/ni1007-1031 17878910
    • (2007) Nat Immunol , vol.8 , pp. 1031-1033
    • Boehm, T.1
  • 22
    • 33749356828 scopus 로고    scopus 로고
    • Alternative adaptive immunity in invertebrates
    • 10.1016/j.it.2006.09.001 16979938
    • Alternative adaptive immunity in invertebrates. Kurtz J, Armitage SAO, Trends Immunol 2006 27 493 496 10.1016/j.it.2006.09.001 16979938
    • (2006) Trends Immunol , vol.27 , pp. 493-496
    • Kurtz, J.1    Armitage, S.A.O.2
  • 23
    • 24944590969 scopus 로고    scopus 로고
    • Insects diversify one molecule to serve two systems
    • 10.1126/science.1118828 16166509
    • Insects diversify one molecule to serve two systems. Du Pasquier L, Science 2005 309 1826 1827 10.1126/science.1118828 16166509
    • (2005) Science , vol.309 , pp. 1826-1827
    • Du Pasquier, L.1
  • 25
    • 4644353346 scopus 로고    scopus 로고
    • The organization and evolution of the dipteran and hymenopteran Down syndrome cell adhesion molecule (Dscam) genes
    • 10.1261/rna.7105504 15383675
    • The organization and evolution of the dipteran and hymenopteran Down syndrome cell adhesion molecule (Dscam) genes. Graveley BR, Kaur A, Gunning D, Zipursky SL, Rowen L, Clemens JC, RNA 2004 10 1499 1506 10.1261/rna.7105504 15383675
    • (2004) RNA , vol.10 , pp. 1499-1506
    • Graveley, B.R.1    Kaur, A.2    Gunning, D.3    Zipursky, S.L.4    Rowen, L.5    Clemens, J.C.6
  • 26
    • 69949094175 scopus 로고    scopus 로고
    • The putative invertebrate adaptive immune protein Litopenaeus vannamei Dscam (LvDscam) is the first reported Dscam to lack a transmembrane domain and cytoplasmic tail
    • 10.1016/j.dci.2009.07.006 19635499
    • The putative invertebrate adaptive immune protein Litopenaeus vannamei Dscam (LvDscam) is the first reported Dscam to lack a transmembrane domain and cytoplasmic tail. Chou P-H, Chang H-S, Chen IT, Lin H-Y, Chen Y-M, Yang H-L, Wang KCH-C, Dev Comp Immunol 2009 33 1258 1267 10.1016/j.dci.2009.07.006 19635499
    • (2009) Dev Comp Immunol , vol.33 , pp. 1258-1267
    • Chou, P.-H.1    Chang, H.-S.2    Chen, I.T.3    Lin, H.-Y.4    Chen, Y.-M.5    Yang, H.-L.6    Wang, K.-C.7
  • 27
    • 79953310285 scopus 로고    scopus 로고
    • Penaeus monodon Dscam (PmDscam) has a highly diverse cytoplasmic tail and is the first membrane-bound shrimp Dscam to be reported
    • 10.1016/j.fsi.2011.02.009 21338689
    • Penaeus monodon Dscam (PmDscam) has a highly diverse cytoplasmic tail and is the first membrane-bound shrimp Dscam to be reported. Chou P-H, Chang H-S, Chen IT, Lee C-W, Hung H-Y, Han-Ching Wang KC, Fish Shellfish Immunol 2011 30 1109 1123 10.1016/j.fsi.2011.02.009 21338689
    • (2011) Fish Shellfish Immunol , vol.30 , pp. 1109-1123
    • Chou, P.-H.1    Chang, H.-S.2    Chen, I.T.3    Lee, C.-W.4    Hung, H.-Y.5    Han-Ching Wang, K.C.6
  • 28
    • 33845731203 scopus 로고    scopus 로고
    • Tracking the evolution of alternatively spliced exons within the Dscam family
    • 10.1186/1471-2148-6-16 16483367
    • Tracking the evolution of alternatively spliced exons within the Dscam family. Crayton ME, Powell BC, Vision TJ, Giddings MC, BMC Evol Biol 2006 6 16 16 10.1186/1471-2148-6-16 16483367
    • (2006) BMC Evol Biol , vol.6 , pp. 16-16
    • Crayton, M.E.1    Powell, B.C.2    Vision, T.J.3    Giddings, M.C.4
  • 29
    • 33845883023 scopus 로고    scopus 로고
    • Paleontological evidence to date the tree of life
    • 17047029
    • Paleontological evidence to date the tree of life. Benton MJ, Donoghue PCJ, Mol Biol Evol 2007 24 26 53 17047029
    • (2007) Mol Biol Evol , vol.24 , pp. 26-53
    • Benton, M.J.1    Donoghue, P.C.J.2
  • 31
    • 16844382374 scopus 로고    scopus 로고
    • Pancrustacean phylogeny: Hexapods are terrestrial crustaceans and maxillopods are not monophyletic
    • 10.1098/rspb.2004.2917
    • Pancrustacean phylogeny: hexapods are terrestrial crustaceans and maxillopods are not monophyletic. Regier JC, Shultz JW, Kambic RE, Proc R Soc Lond B Biol Sci 2005 272 395 401 10.1098/rspb.2004.2917
    • (2005) Proc R Soc Lond B Biol Sci , vol.272 , pp. 395-401
    • Regier, J.C.1    Shultz, J.W.2    Kambic, R.E.3
  • 32
    • 33750526053 scopus 로고    scopus 로고
    • Phylogenomic analysis reveals bees and wasps (Hymenoptera) at the base of the radiation of Holometabolous insects
    • 10.1101/gr.5204306 17065606
    • Phylogenomic analysis reveals bees and wasps (Hymenoptera) at the base of the radiation of Holometabolous insects. Jl S, Tautz D, Richards S, Weinstock GM, Gibbs RA, Werren JH, Tettelin H, Lercher MJ, Genome Res 2006 16 1334 1338 10.1101/gr.5204306 17065606
    • (2006) Genome Res , vol.16 , pp. 1334-1338
    • Jl, S.1    Tautz, D.2    Richards, S.3    Weinstock, G.M.4    Gibbs, R.A.5    Werren, J.H.6    Tettelin, H.7    Lercher, M.J.8
  • 33
    • 40549091620 scopus 로고    scopus 로고
    • The Ediacaran emergence of bilaterians: Congruence between the genetic and the geological fossil records
    • 10.1098/rstb.2007.2233 18192191
    • The Ediacaran emergence of bilaterians: congruence between the genetic and the geological fossil records. Peterson KJ, Cotton JA, Gehling JG, Pisani D, Philos Trans R Soc Lond B Biol Sci 2008 363 1435 1443 10.1098/rstb.2007.2233 18192191
    • (2008) Philos Trans R Soc Lond B Biol Sci , vol.363 , pp. 1435-1443
    • Peterson, K.J.1    Cotton, J.A.2    Gehling, J.G.3    Pisani, D.4
  • 34
    • 77950587788 scopus 로고    scopus 로고
    • Higher-level crustacean phylogeny: Consensus and conflicting hypotheses
    • 10.1016/j.asd.2009.11.001 19944189
    • Higher-level crustacean phylogeny: consensus and conflicting hypotheses. Jenner R, Arthropod Struct Dev 2010 39 143 153 10.1016/j.asd.2009.11.001 19944189
    • (2010) Arthropod Struct Dev , vol.39 , pp. 143-153
    • Jenner, R.1
  • 36
    • 0347519175 scopus 로고    scopus 로고
    • The immunoglobulin superfamily in Drosophila melanogaster and Caenorhabditis elegans and the evolution of complexity
    • 10.1242/dev.00848 14623821
    • The immunoglobulin superfamily in Drosophila melanogaster and Caenorhabditis elegans and the evolution of complexity. Vogel C, Teichmann SA, Chothia C, Development 2003 130 6317 6328 10.1242/dev.00848 14623821
    • (2003) Development , vol.130 , pp. 6317-6328
    • Vogel, C.1    Teichmann, S.A.2    Chothia, C.3
  • 37
    • 34250022501 scopus 로고    scopus 로고
    • Dscam2 mediates axonal tiling in the Drosophila visual system
    • 10.1038/nature05855 17554308
    • Dscam2 mediates axonal tiling in the Drosophila visual system. Millard SS, Flanagan JJ, Pappu KS, Wu W, Zipursky SL, Nature 2007 447 720 724 10.1038/nature05855 17554308
    • (2007) Nature , vol.447 , pp. 720-724
    • Millard, S.S.1    Flanagan, J.J.2    Pappu, K.S.3    Wu, W.4    Zipursky, S.L.5
  • 39
    • 33846202886 scopus 로고    scopus 로고
    • A honey bee Dscam family member, AbsCAM, is a brain-specific cell adhesion molecule with the neurite outgrowth activity which influences neuronal wiring during development
    • 10.1111/j.1460-9568.2006.05270.x 17241278
    • A honey bee Dscam family member, AbsCAM, is a brain-specific cell adhesion molecule with the neurite outgrowth activity which influences neuronal wiring during development. Funada M, Hara H, Sasagawa H, Kitagawa Y, Kadowaki T, Eur J Neurosci 2007 25 168 180 10.1111/j.1460-9568.2006.05270.x 17241278
    • (2007) Eur J Neurosci , vol.25 , pp. 168-180
    • Funada, M.1    Hara, H.2    Sasagawa, H.3    Kitagawa, Y.4    Kadowaki, T.5
  • 40
    • 0031964775 scopus 로고    scopus 로고
    • DSCAM: A novel member of the immunoglobulin superfamily maps in a Down syndrome region and is involved in the development of the nervous system
    • 10.1093/hmg/7.2.227 9426258
    • DSCAM: a novel member of the immunoglobulin superfamily maps in a Down syndrome region and is involved in the development of the nervous system. Yamakawa K, Huot YK, Haendelt MA, Hubert R, Chen XN, Lyons GE, Korenberg JR, Hum Mol Genet 1998 7 227 237 10.1093/hmg/7.2.227 9426258
    • (1998) Hum Mol Genet , vol.7 , pp. 227-237
    • Yamakawa, K.1    Huot, Y.K.2    Haendelt, M.A.3    Hubert, R.4    Chen, X.N.5    Lyons, G.E.6    Korenberg, J.R.7
  • 41
    • 62449286259 scopus 로고    scopus 로고
    • DSCAM functions as a netrin receptor in commissural axon pathfinding
    • 10.1073/pnas.0811083106 19196994
    • DSCAM functions as a netrin receptor in commissural axon pathfinding. Liu G, Li W, Wang L, Kar A, Guan K-L, Rao Y, Wu JY, Proc Natl Acad Sci USA 2009 106 2951 2956 10.1073/pnas.0811083106 19196994
    • (2009) Proc Natl Acad Sci USA , vol.106 , pp. 2951-2956
    • Liu, G.1    Li, W.2    Wang, L.3    Kar, A.4    Guan, K.-L.5    Rao, Y.6    Wu, J.Y.7
  • 42
    • 70449747874 scopus 로고    scopus 로고
    • DSCAM and DSCAML1 function in self-avoidance in multiple cell types in the developing mouse retina
    • 10.1016/j.neuron.2009.09.027 19945391
    • DSCAM and DSCAML1 function in self-avoidance in multiple cell types in the developing mouse retina. Fuerst PG, Bruce F, Tian M, Wei W, Elstrott J, Feller MB, Erskine L, Singer JH, Burgess RW, Neuron 2009 64 484 497 10.1016/j.neuron.2009.09.027 19945391
    • (2009) Neuron , vol.64 , pp. 484-497
    • Fuerst, P.G.1    Bruce, F.2    Tian, M.3    Wei, W.4    Elstrott, J.5    Feller, M.B.6    Erskine, L.7    Singer, J.H.8    Burgess, R.W.9
  • 43
    • 0034811349 scopus 로고    scopus 로고
    • Cloning and functional characterization of DSCAML1, a novel DSCAM-like cell adhesion molecule that mediates homophilic intercellular adhesion
    • 10.1006/bbrc.2001.5214 11453658
    • Cloning and functional characterization of DSCAML1, a novel DSCAM-like cell adhesion molecule that mediates homophilic intercellular adhesion. Agarwala KL, Ganesh S, Tsutsumi Y, Suzuki T, Amano K, Yamakawa K, Biochem Biophys Res Commun 2001 285 760 772 10.1006/bbrc.2001.5214 11453658
    • (2001) Biochem Biophys Res Commun , vol.285 , pp. 760-772
    • Agarwala, K.L.1    Ganesh, S.2    Tsutsumi, Y.3    Suzuki, T.4    Amano, K.5    Yamakawa, K.6
  • 44
    • 0031743421 scopus 로고    scopus 로고
    • Profile hidden Markov models
    • 10.1093/bioinformatics/14.9.755 9918945
    • Profile hidden Markov models. Eddy SR, Bioinformatics 1998 14 755 755 10.1093/bioinformatics/14.9.755 9918945
    • (1998) Bioinformatics , vol.14 , pp. 755-755
    • Eddy, S.R.1
  • 45
    • 5044223128 scopus 로고    scopus 로고
    • What is a hidden Markov model?
    • 10.1038/nbt1004-1315 15470472
    • What is a hidden Markov model? Eddy SR, Nat Biotechnol 2004 22 1315 1316 10.1038/nbt1004-1315 15470472
    • (2004) Nat Biotechnol , vol.22 , pp. 1315-1316
    • Eddy, S.R.1
  • 46
    • 0141626909 scopus 로고    scopus 로고
    • AE H: Detecting putative orthologs
    • 10.1093/bioinformatics/btg213 15593400
    • AE H: Detecting putative orthologs. Wall D, Fraser H, Bioinformatics 2003 19 1710 1711 10.1093/bioinformatics/btg213 15593400
    • (2003) Bioinformatics , vol.19 , pp. 1710-1711
    • Wall, D.1    Fraser, H.2
  • 47
    • 0029937428 scopus 로고    scopus 로고
    • Hidden Markov models
    • 10.1016/S0959-440X(96)80056-X 8804822
    • Hidden Markov models. Eddy SR, Curr Opin Struct Biol 1996 6 361 365 10.1016/S0959-440X(96)80056-X 8804822
    • (1996) Curr Opin Struct Biol , vol.6 , pp. 361-365
    • Eddy, S.R.1
  • 48
    • 80055082271 scopus 로고    scopus 로고
    • Accelerated Profile HMM Searches
    • 10.1371/journal.pcbi.1002195 22039361
    • Accelerated Profile HMM Searches. Eddy SR, PLoS Comput Biol 2011 7 1002195 10.1371/journal.pcbi.1002195 22039361
    • (2011) PLoS Comput Biol , vol.7 , pp. 51002195
    • Eddy, S.R.1
  • 55
    • 59649116641 scopus 로고    scopus 로고
    • The genome of a lepidopteran model insect, the silkworm Bombyx mori
    • The genome of a lepidopteran model insect, 10.1016/j.ibmb.2008.11.004 19121390
    • The genome of a lepidopteran model insect, the silkworm Bombyx mori. The International Silkworm Genome Consortium, Insect Biochem Mol Biol 2008 38 1036 1045 10.1016/j.ibmb.2008.11.004 19121390
    • (2008) Insect Biochem Mol Biol , vol.38 , pp. 1036-1045
  • 58
    • 77649141259 scopus 로고    scopus 로고
    • Genome sequence of the pea aphid Acyrthosiphon pisum
    • 10.1371/journal.pbio.1000313 20186266
    • Genome sequence of the pea aphid Acyrthosiphon pisum. The International Aphid Genomics Consortium, PLoS Biology 2010 8 1000313 10.1371/journal.pbio. 1000313 20186266
    • (2010) PLoS Biology , vol.8 , pp. 51000313
    • International Aphid Genomics Consortium, T.1
  • 60
    • 3042666256 scopus 로고    scopus 로고
    • MUSCLE: Multiple sequence alignment with high accuracy and high throughput
    • 10.1093/nar/gkh340 15034147
    • MUSCLE: multiple sequence alignment with high accuracy and high throughput. Edgar RC, Nucleic Acids Res 2004 32 1792 1797 10.1093/nar/gkh340 15034147
    • (2004) Nucleic Acids Res , vol.32 , pp. 1792-1797
    • Edgar, R.C.1
  • 61
    • 0034065724 scopus 로고    scopus 로고
    • Ab initio Gene Finding in Drosophila Genomic DNA
    • 10.1101/gr.10.4.516 10779491
    • Ab initio Gene Finding in Drosophila Genomic DNA. Salamov AA, Solovyev VV, Genome Res 2000 10 516 522 10.1101/gr.10.4.516 10779491
    • (2000) Genome Res , vol.10 , pp. 516-522
    • Salamov, A.A.1    Solovyev, V.V.2
  • 62
    • 34547489084 scopus 로고    scopus 로고
    • Improvement of phylogenies after removing divergent and ambiguously aligned blocks from protein sequence alignments
    • 10.1080/10635150701472164 17654362
    • Improvement of phylogenies after removing divergent and ambiguously aligned blocks from protein sequence alignments. Talavera G, Castresana J, Syst Biol 2007 56 564 577 10.1080/10635150701472164 17654362
    • (2007) Syst Biol , vol.56 , pp. 564-577
    • Talavera, G.1    Castresana, J.2
  • 63
    • 0036593395 scopus 로고    scopus 로고
    • Ancient Phylogenetic Relationships
    • 10.1006/tpbi.2002.1593 12167360
    • Ancient Phylogenetic Relationships. Gribaldo S, Philippe H, Theor Popul Biol 2002 61 391 408 10.1006/tpbi.2002.1593 12167360
    • (2002) Theor Popul Biol , vol.61 , pp. 391-408
    • Gribaldo, S.1    Philippe, H.2
  • 64
    • 45849154166 scopus 로고    scopus 로고
    • An improved general amino acid replacement matrix
    • 10.1093/molbev/msn067 18367465
    • An improved general amino acid replacement matrix. Le SQ, Gascuel O, Mol Biol Evol 2008 25 1307 1320 10.1093/molbev/msn067 18367465
    • (2008) Mol Biol Evol , vol.25 , pp. 1307-1320
    • Le, S.Q.1    Gascuel, O.2
  • 65
    • 18744382506 scopus 로고    scopus 로고
    • ProtTest: Selection of best-fit models of protein evolution
    • 10.1093/bioinformatics/bti263 15647292
    • ProtTest: selection of best-fit models of protein evolution. Abascal F, Zardoya R, Posada D, Bioinformatics 2005 21 2104 2105 10.1093/bioinformatics/ bti263 15647292
    • (2005) Bioinformatics , vol.21 , pp. 2104-2105
    • Abascal, F.1    Zardoya, R.2    Posada, D.3
  • 66
    • 33750403801 scopus 로고    scopus 로고
    • RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
    • 10.1093/bioinformatics/btl446 16928733
    • RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Stamatakis A, Bioinformatics 2006 22 2688 2690 10.1093/bioinformatics/btl446 16928733
    • (2006) Bioinformatics , vol.22 , pp. 2688-2690
    • Stamatakis, A.1
  • 67
    • 2442691520 scopus 로고    scopus 로고
    • A Bayesian mixture model for across-site heterogeneities in the amino-acid replacement process
    • 10.1093/molbev/msh112 15014145
    • A Bayesian mixture model for across-site heterogeneities in the amino-acid replacement process. Lartillot N, Philippe H, Mol Biol Evol 2004 21 1095 1109 10.1093/molbev/msh112 15014145
    • (2004) Mol Biol Evol , vol.21 , pp. 1095-1109
    • Lartillot, N.1    Philippe, H.2
  • 69
    • 0032766857 scopus 로고    scopus 로고
    • Multiple Comparisons of Log-Likelihoods with Applications to Phylogenetic Inference
    • 10.1093/oxfordjournals.molbev.a026201
    • Multiple Comparisons of Log-Likelihoods with Applications to Phylogenetic Inference. Shimodaira H, Hasegawa M, Mol Biol Evol 1999 16 1114 1116 10.1093/oxfordjournals.molbev.a026201
    • (1999) Mol Biol Evol , vol.16 , pp. 1114-1116
    • Shimodaira, H.1    Hasegawa, M.2
  • 70
    • 0031741182 scopus 로고    scopus 로고
    • Estimating the rate of evolution of the rate of molecular evolution
    • 10.1093/oxfordjournals.molbev.a025892 9866200
    • Estimating the rate of evolution of the rate of molecular evolution. Thorne JL, Kishino H, Painter IS, Mol Biol Evol 1998 15 1647 1657 10.1093/oxfordjournals.molbev.a025892 9866200
    • (1998) Mol Biol Evol , vol.15 , pp. 1647-1657
    • Thorne, J.L.1    Kishino, H.2    Painter, I.S.3
  • 71
    • 33747847779 scopus 로고    scopus 로고
    • PAL2NAL: Robust conversion of protein sequence alignments into the corresponding codon alignments
    • 10.1093/nar/gkl315 16845082
    • PAL2NAL: robust conversion of protein sequence alignments into the corresponding codon alignments. Suyama M, Torrents D, Bork P, Nucleic Acids Res 2006 34 609 612 10.1093/nar/gkl315 16845082
    • (2006) Nucleic Acids Res , vol.34 , pp. 23609-23612
    • Suyama, M.1    Torrents, D.2    Bork, P.3
  • 72
    • 77953790078 scopus 로고    scopus 로고
    • Internal and external paralogy in the evolution of tropomyosin genes in metazoans
    • 10.1093/molbev/msq018 20147436
    • Internal and external paralogy in the evolution of tropomyosin genes in metazoans. Irimia M, Maeso I, Gunning PW, Garcia-Fernndez J, Roy SW, Mol Biol Evol 2010 27 1504 1517 10.1093/molbev/msq018 20147436
    • (2010) Mol Biol Evol , vol.27 , pp. 1504-1517
    • Irimia, M.1    Maeso, I.2    Gunning, P.W.3    Garcia-Fernndez, J.4    Roy, S.W.5
  • 73
    • 83155167544 scopus 로고    scopus 로고
    • Population genetics of duplicated alternatively spliced exons of the Dscam gene in Daphnia and Drosophila
    • 10.1371/journal.pone.0027947 22174757
    • Population genetics of duplicated alternatively spliced exons of the Dscam gene in Daphnia and Drosophila. Brites D, Encinas-Viso F, Ebert D, Du Pasquier L, Haag CR, PLoS One 2011 6 27947 10.1371/journal.pone.0027947 22174757
    • (2011) PLoS One , vol.6 , pp. 527947
    • Brites, D.1    Encinas-Viso, F.2    Ebert, D.3    Du Pasquier, L.4    Haag, C.R.5
  • 74
    • 0036889686 scopus 로고    scopus 로고
    • Orthology, parology and proposed classification for paralog subtypes
    • 10.1016/S0168-9525(02)02793-2 12446146
    • Orthology, parology and proposed classification for paralog subtypes. Sonnhammer ELL, Koonin EV, Trends Genet 2002 18 619 620 10.1016/S0168-9525(02) 02793-2 12446146
    • (2002) Trends Genet , vol.18 , pp. 619-620
    • Sonnhammer, E.L.L.1    Koonin, E.V.2
  • 75
    • 74549202065 scopus 로고    scopus 로고
    • Arthropods (Arthropoda)
    • Oxford: Oxford University Press Blair Hedges S, Sudhir Kumar
    • Arthropods (Arthropoda). Pisani D, The timetree of life Oxford: Oxford University Press, Blair Hedges S, Sudhir Kumar, 2009 251 254
    • (2009) The Timetree of Life , pp. 251-254
    • Pisani, D.1
  • 76
    • 77953806572 scopus 로고    scopus 로고
    • Animals (Metazoa)
    • Oxford: Oxford University Press Blair Hedges S, Sudhir Kumar
    • Animals (Metazoa). Blair J, The timetree of life Oxford: Oxford University Press, Blair Hedges S, Sudhir Kumar, 2009 223 230
    • (2009) The Timetree of Life , pp. 223-230
    • Blair, J.1
  • 77
    • 0036094818 scopus 로고    scopus 로고
    • An insect molecular clock dates the origin of the insects and accords with palaeontological and biogeographic landmarks
    • 10.1093/oxfordjournals.molbev.a004133 11961108
    • An insect molecular clock dates the origin of the insects and accords with palaeontological and biogeographic landmarks. Gaunt MW, Miles MA, Mol Biol Evol 2002 19 748 761 10.1093/oxfordjournals.molbev.a004133 11961108
    • (2002) Mol Biol Evol , vol.19 , pp. 748-761
    • Gaunt, M.W.1    Miles, M.A.2
  • 78
    • 0038440445 scopus 로고    scopus 로고
    • Advanced formulation of base pair changes in the stem regions of ribosomal RNAs; Its application to mitochondrial rRNAs for resolving the phylogeny of animals
    • 10.1016/S0022-5193(03)00057-2 12781743
    • Advanced formulation of base pair changes in the stem regions of ribosomal RNAs; its application to mitochondrial rRNAs for resolving the phylogeny of animals. Otsuka J, Sugaya N, J Theor Biol 2003 222 447 460 10.1016/S0022-5193(03)00057-2 12781743
    • (2003) J Theor Biol , vol.222 , pp. 447-460
    • Otsuka, J.1    Sugaya, N.2
  • 79
    • 75549087305 scopus 로고    scopus 로고
    • The evolution of gene duplications: Classifying and distinguishing between models
    • 20051986
    • The evolution of gene duplications: classifying and distinguishing between models. Innan H, Kondrashov F, Nat Rev Genet 2010 11 97 108 20051986
    • (2010) Nat Rev Genet , vol.11 , pp. 97-108
    • Innan, H.1    Kondrashov, F.2
  • 80
    • 75649092310 scopus 로고    scopus 로고
    • Massive expansions of Dscam splicing diversity via staggered homologous recombination during arthropod evolution
    • 19934230
    • Massive expansions of Dscam splicing diversity via staggered homologous recombination during arthropod evolution. Lee C, Kim N, Roy M, Graveley BR, RNA 2009 16 91 105 19934230
    • (2009) RNA , vol.16 , pp. 91-105
    • Lee, C.1    Kim, N.2    Roy, M.3    Graveley, B.R.4
  • 81
    • 0030861159 scopus 로고    scopus 로고
    • Evolution of codon usage bias in Drosophila
    • 10.1073/pnas.94.15.7784 9223264
    • Evolution of codon usage bias in Drosophila. Powell JR, Moriyama EN, Proc Natl Acad Sci USA 1997 94 7784 7790 10.1073/pnas.94.15.7784 9223264
    • (1997) Proc Natl Acad Sci USA , vol.94 , pp. 7784-7790
    • Powell, J.R.1    Moriyama, E.N.2
  • 82
    • 1242352089 scopus 로고    scopus 로고
    • Temporal patterns of fruit fly (Drosophila) evolution revealed by mutation clocks
    • 12949132
    • Temporal patterns of fruit fly (Drosophila) evolution revealed by mutation clocks. Tamura K, Subramanian S, Kumar S, Mol Biol Evol 2004 21 36 44 12949132
    • (2004) Mol Biol Evol , vol.21 , pp. 36-44
    • Tamura, K.1    Subramanian, S.2    Kumar, S.3
  • 83
    • 0028910659 scopus 로고
    • Molecular phylogeny and divergence times of drosophilid species
    • 7739381
    • Molecular phylogeny and divergence times of drosophilid species. Russo CA, Takezaki N, Nei M, Mol Biol Evol 1995 12 391 404 7739381
    • (1995) Mol Biol Evol , vol.12 , pp. 391-404
    • Russo, C.A.1    Takezaki, N.2    Nei, M.3
  • 84
    • 51549115043 scopus 로고    scopus 로고
    • A double S shape provides the structural basis for the extraordinary binding specificity of Dscam isoforms
    • 10.1016/j.cell.2008.07.042 18805093
    • A double S shape provides the structural basis for the extraordinary binding specificity of Dscam isoforms. Sawaya MR, Wojtowicz WM, Andre I, Qian B, Wu W, Baker D, Eisenberg D, Zipursky SL, Cell 2008 134 1007 1018 10.1016/j.cell.2008.07.042 18805093
    • (2008) Cell , vol.134 , pp. 1007-1018
    • Sawaya, M.R.1    Wojtowicz, W.M.2    Andre, I.3    Qian, B.4    Wu, W.5    Baker, D.6    Eisenberg, D.7    Zipursky, S.L.8


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