-
1
-
-
14544279484
-
Inverse relationship between evolutionary rate and age of mammalian genes
-
DOI 10.1093/molbev/msi045
-
Alba MM, Castresana J. 2005. Inverse relationship between evolutionary rate and age of mammalian genes. Mol Biol Evol 22: 598-606. (Pubitemid 40299509)
-
(2005)
Molecular Biology and Evolution
, vol.22
, Issue.3
, pp. 598-606
-
-
Alba, M.M.1
Castresana, J.2
-
2
-
-
77952474987
-
Cellular heterogeneity: Do differences make a difference?
-
Altschuler SJ, Wu LF. 2010. Cellular heterogeneity: Do differences make a difference? Cell 141: 559-563.
-
(2010)
Cell
, vol.141
, pp. 559-563
-
-
Altschuler, S.J.1
Wu, L.F.2
-
3
-
-
0037316303
-
A comparison of normalization methods for high density oligonucleotide array data based on variance and bias
-
DOI 10.1093/bioinformatics/19.2.185
-
Bolstad BM, Irizarry RA, Astrand M, Speed TP. 2003. A comparison of normalization methods for high density oligonucleotide array data based on variance and bias. Bioinformatics 19: 185-193. (Pubitemid 36181903)
-
(2003)
Bioinformatics
, vol.19
, Issue.2
, pp. 185-193
-
-
Bolstad, B.M.1
Irizarry, R.A.2
Astrand, M.3
Speed, T.P.4
-
4
-
-
70350683774
-
Expression quantitative trait loci detected in cell lines are often present in primary tissues
-
Bullaughey K, Chavarria CI, Coop G, Gilad Y. 2009. Expression quantitative trait loci detected in cell lines are often present in primary tissues. Hum Mol Genet 18: 4296-4303.
-
(2009)
Hum Mol Genet
, vol.18
, pp. 4296-4303
-
-
Bullaughey, K.1
Chavarria, C.I.2
Coop, G.3
Gilad, Y.4
-
5
-
-
0035931097
-
Further defining housekeeping, or "maintenance," genes. Focus on "A compendium of gene expression in normal human tissues"
-
Butte AJ, Dzau VJ, Glueck SB. 2001. Further defining housekeeping, or "maintenance," genes. Focus on "A compendium of gene expression in normal human tissues". Physiol Genomics 7: 95-96.
-
(2001)
Physiol Genomics
, vol.7
, pp. 95-96
-
-
Butte, A.J.1
Dzau, V.J.2
Glueck, S.B.3
-
6
-
-
79953124177
-
The effects of EBV transformation on gene expression levels andmethylation profiles
-
Cxalisxkan M, Cusanovich DA, Ober C, Gilad Y. 2011. The effects of EBV transformation on gene expression levels andmethylation profiles. Hum Mol Genet 20: 1643-1652.
-
(2011)
Hum Mol Genet
, vol.20
, pp. 1643-1652
-
-
Cxalisxkan, M.1
Cusanovich, D.A.2
Ober, C.3
Gilad, Y.4
-
7
-
-
0036785575
-
Epstein-Barr virus-induced changes in B-lymphocyte gene expression
-
Carter KL, Cahir-McFarland E, Kieff E. 2002. Epstein-Barr virus-induced changes in B-lymphocyte gene expression. J Virol 76: 10427-10436.
-
(2002)
J Virol
, vol.76
, pp. 10427-10436
-
-
Carter, K.L.1
Cahir-McFarland, E.2
Kieff, E.3
-
8
-
-
40749105508
-
Variations in DNA elucidate molecular networks that cause disease
-
DOI 10.1038/nature06757, PII NATURE06757
-
Chen YQ, Zhu J, Lum PY, Yang X, Pinto S, MacNeil DJ, Zhang CS, Lamb J, Edwards S, Sieberts SK, et al. 2008. Variations in DNA elucidate molecular networks that cause disease. Nature 452: 429-435. (Pubitemid 351450844)
-
(2008)
Nature
, vol.452
, Issue.7186
, pp. 429-435
-
-
Chen, Y.1
Zhu, J.2
Lum, P.Y.3
Yang, X.4
Pinto, S.5
MacNeil, D.J.6
Zhang, C.7
Lamb, J.8
Edwards, S.9
Sieberts, S.K.10
Leonardson, A.11
Castellini, L.W.12
Wang, S.13
Champy, M.-F.14
Zhang, B.15
Emilsson, V.16
Doss, S.17
Ghazalpour, A.18
Horvath, S.19
Drake, T.A.20
Lusis, A.J.21
Schadt, E.E.22
more..
-
9
-
-
68949211709
-
Genetics of human gene expression: MappingDNAvariants that influence gene expression
-
Cheung VG, Spielman RS. 2009. Genetics of human gene expression: MappingDNAvariants that influence gene expression. Nat Rev Genet 10: 595-604.
-
(2009)
Nat Rev Genet
, vol.10
, pp. 595-604
-
-
Cheung, V.G.1
Spielman, R.S.2
-
10
-
-
0037370311
-
Natural variation in human gene expression assessed in lymphoblastoid cells
-
DOI 10.1038/ng1094
-
Cheung VG, Conlin LK, Weber TM, Arcaro M, Jen KY, Morley M, Spielman RS. 2003. Natural variation in human gene expression assessed in lymphoblastoid cells. Nat Genet 33: 422-425. (Pubitemid 36278862)
-
(2003)
Nature Genetics
, vol.33
, Issue.3
, pp. 422-425
-
-
Cheung, V.G.1
Conlin, L.K.2
Weber, T.M.3
Arcaro, M.4
Jen, K.-Y.5
Morley, M.6
Spielman, R.S.7
-
11
-
-
27644482314
-
Mapping determinants of human gene expression by regional and genome-wide association
-
DOI 10.1038/nature04244, PII N04244
-
Cheung VG, Spielman RS, Ewens KG, Weber TM, Morley M, Burdick JT. 2005. Mapping determinants of human gene expression by regional and genome-wide association. Nature 437: 1365-1369. (Pubitemid 41568683)
-
(2005)
Nature
, vol.437
, Issue.7063
, pp. 1365-1369
-
-
Cheung, V.G.1
Spielman, R.S.2
Ewens, K.G.3
Weber, T.M.4
Morley, M.5
Burdick, J.T.6
-
12
-
-
77957920003
-
Polymorphic cis- And trans-regulation of human gene expression
-
doi: 10.1371/ journal.pbio.1000480
-
Cheung VG, Nayak RR, Wang IXR, Elwyn S, Cousins SM, Morley M, Spielman RS. 2010. Polymorphic cis- and trans-regulation of human gene expression. PLoS Biol 8: e1000480. doi: 10.1371/ journal.pbio.1000480.
-
(2010)
PLoS Biol
, vol.8
-
-
Cheung, V.G.1
Nayak, R.R.2
Wang, I.X.R.3
Elwyn, S.4
Cousins, S.M.5
Morley, M.6
Spielman, R.S.7
-
13
-
-
0024249854
-
A comparison of genetic and phenotypic correlations
-
Cheverud JM. 1988. A comparison of genetic and phenotypic correlations. Evolution 42: 958-968. (Pubitemid 19325688)
-
(1988)
Evolution
, vol.42
, Issue.5
, pp. 958-968
-
-
Cheverud, J.M.1
-
14
-
-
57149114316
-
Genetic analysis of human traits in vitro: Drug response and gene expression in lymphoblastoid cell lines
-
doi: 10.1371/ journal.pgen.1000287
-
Choy E, Yelensky R, Bonakdar S, Plenge RM, Saxena R, De Jager PL, Shaw SY, Wolfish CS, Slavik JM, Cotsapas C, et al. 2008. Genetic analysis of human traits in vitro: Drug response and gene expression in lymphoblastoid cell lines. PLoS Genet 4: 16. doi: 10.1371/ journal.pgen.1000287.
-
(2008)
PLoS Genet
, vol.4
, pp. 16
-
-
Choy, E.1
Yelensky, R.2
Bonakdar, S.3
Plenge, R.M.4
Saxena, R.5
De Jager, P.L.6
Shaw, S.Y.7
Wolfish, C.S.8
Slavik, J.M.9
Cotsapas, C.10
-
15
-
-
60349092402
-
Mapping complex disease traits with global gene expression
-
Cookson W, Liang L, Abecasis G, Moffatt M, Lathrop M. 2009. Mapping complex disease traits with global gene expression. Nat Rev Genet 10: 184-194.
-
(2009)
Nat Rev Genet
, vol.10
, pp. 184-194
-
-
Cookson, W.1
Liang, L.2
Abecasis, G.3
Moffatt, M.4
Lathrop, M.5
-
16
-
-
69949176863
-
Common regulatory variation impacts gene expression in a cell type-dependent manner
-
Dimas AS, Deutsch S, Stranger BE, Montgomery SB, Borel C, Attar-Cohen H, Ingle C, Beazley C, Arcelus MG, Sekowska M, et al. 2009. Common regulatory variation impacts gene expression in a cell type-dependent manner. Science 325: 1246-1250.
-
(2009)
Science
, vol.325
, pp. 1246-1250
-
-
Dimas, A.S.1
Deutsch, S.2
Stranger, B.E.3
Montgomery, S.B.4
Borel, C.5
Attar-Cohen, H.6
Ingle, C.7
Beazley, C.8
Arcelus, M.G.9
Sekowska, M.10
-
17
-
-
78649783848
-
Gene expression in skin and lymphoblastoid cells: Refined statistical method reveals extensive overlap in cis-eQTL signals
-
Ding J, Gudjonsson JE, Liang LM, Stuart PE, Li Y, Chen W, Weichenthal M, Ellinghaus E, Franke A, CooksonW, et al. 2010. Gene expression in skin and lymphoblastoid cells: refined statistical method reveals extensive overlap in cis-eQTL signals. Am J Hum Genet 87: 779-789.
-
(2010)
Am J Hum Genet
, vol.87
, pp. 779-789
-
-
Ding, J.1
Gudjonsson, J.E.2
Liang, L.M.3
Stuart, P.E.4
Li, Y.5
Chen, W.6
Weichenthal, M.7
Ellinghaus, E.8
Franke, A.9
Cookson, W.10
-
18
-
-
34548805282
-
A genome-wide association study of global gene expression
-
DOI 10.1038/ng2109, PII NG2109
-
Dixon AL, Liang L, Moffatt MF, Chen W, Heath S, Wong KCC, Taylor J, Burnett E, Gut I, Farrall M, et al. 2007. A genome-wide association study of global gene expression. Nat Genet 39: 1202-1207. (Pubitemid 47482680)
-
(2007)
Nature Genetics
, vol.39
, Issue.10
, pp. 1202-1207
-
-
Dixon, A.L.1
Liang, L.2
Moffatt, M.F.3
Chen, W.4
Heath, S.5
Wong, K.C.C.6
Taylor, J.7
Burnett, E.8
Gut, I.9
Farrall, M.10
Lathrop, G.M.11
Abecasis, G.R.12
Cookson, W.O.C.13
-
19
-
-
42749097422
-
Genetic architecture of transcript-level variation in humans
-
Duan S, Huang RS, Zhang W, Bleibel WK, Roe CA, Clark TA, Chen TX, Schweitzer AC, Blume JE, Cox NJ, et al. 2008. Genetic architecture of transcript-level variation in humans. Am J Hum Genet 82: 1101-1113.
-
(2008)
Am J Hum Genet
, vol.82
, pp. 1101-1113
-
-
Duan, S.1
Huang, R.S.2
Zhang, W.3
Bleibel, W.K.4
Roe, C.A.5
Clark, T.A.6
Chen, T.X.7
Schweitzer, A.C.8
Blume, J.E.9
Cox, N.J.10
-
20
-
-
41349095280
-
Genetics of gene expression and its effect on disease
-
DOI 10.1038/nature06758, PII NATURE06758
-
Emilsson V, Thorleifsson G, Zhang B, Leonardson AS, Zink F, Zhu J, Carlson S, Helgason A,Walters GB, Gunnarsdottir S, et al. 2008. Genetics of gene expression and its effect on disease. Nature 452: 423-428. (Pubitemid 351450845)
-
(2008)
Nature
, vol.452
, Issue.7186
, pp. 423-428
-
-
Emilsson, V.1
Thorleifsson, G.2
Zhang, B.3
Leonardson, A.S.4
Zink, F.5
Zhu, J.6
Carlson, S.7
Helgason, A.8
Walters, G.B.9
Gunnarsdottir, S.10
Mouy, M.11
Steinthorsdottir, V.12
Eiriksdottir, G.H.13
Bjornsdottir, G.14
Reynisdottir, I.15
Gudbjartsson, D.16
Helgadottir, A.17
Jonasdottir, A.18
Jonasdottir, A.19
Styrkarsdottir, U.20
Gretarsdottir, S.21
Magnusson, K.P.22
Stefansson, H.23
Fossdal, R.24
Kristjansson, K.25
Gislason, H.G.26
Stefansson, T.27
Leifsson, B.G.28
Thorsteinsdottir, U.29
Lamb, J.R.30
Gulcher, J.R.31
Reitman, M.L.32
Kong, A.33
Schadt, E.E.34
Stefansson, K.35
more..
-
21
-
-
39749149956
-
Housekeeping genes tend to show reduced upstream sequence conservation
-
doi: 10.1186/gb-2007-8-7-r140
-
Farre D, Bellora N, Mularoni L, Messeguer X, Alba M. 2007. Housekeeping genes tend to show reduced upstream sequence conservation. Genome Biol 8: R140. doi: 10.1186/gb-2007-8-7-r140.
-
(2007)
Genome Biol
, vol.8
-
-
Farre, D.1
Bellora, N.2
Mularoni, L.3
Messeguer, X.4
Alba, M.5
-
22
-
-
47249142778
-
Revealing the architecture of gene regulation: The promise of eQTL studies
-
Gilad Y, Rifkin SA, Pritchard JK. 2008. Revealing the architecture of gene regulation: The promise of eQTL studies. Trends Genet 24: 408-415.
-
(2008)
Trends Genet
, vol.24
, pp. 408-415
-
-
Gilad, Y.1
Rifkin, S.A.2
Pritchard, J.K.3
-
23
-
-
0029564551
-
Average information REML: An efficient algorithm for variance parameter estimation in linear mixed models
-
DOI 10.2307/2533274
-
Gilmour AR, Thompson R, Cullis BR. 1995. Average information REML: An efficient algorithm for variance parameter estimation in linear mixed models. Biometrics 51: 1440-1450. (Pubitemid 26030188)
-
(1995)
Biometrics
, vol.51
, Issue.4
, pp. 1440-1450
-
-
Gilmour, A.R.1
Thompson, R.2
Cullis, B.R.3
-
25
-
-
34548719076
-
Discovery of expression QTLs using large-scale transcriptional profiling in human lymphocytes
-
DOI 10.1038/ng2119, PII NG2119
-
Goring HHH, Curran JE, Johnson MP, Dyer TD, Charlesworth J, Cole SA, Jowett JBM, Abraham LJ, Rainwater DL, Comuzzie AG, et al. 2007. Discovery of expression QTLs using large-scale transcriptional profiling in human lymphocytes. Nat Genet 39: 1208-1216. (Pubitemid 47482685)
-
(2007)
Nature Genetics
, vol.39
, Issue.10
, pp. 1208-1216
-
-
Goring, H.H.H.1
Curran, J.E.2
Johnson, M.P.3
Dyer, T.D.4
Charlesworth, J.5
Cole, S.A.6
Jowett, J.B.M.7
Abraham, L.J.8
Rainwater, D.L.9
Comuzzie, A.G.10
Mahaney, M.C.11
Almasy, L.12
MacCluer, J.W.13
Kissebah, A.H.14
Collier, G.R.15
Moses, E.K.16
Blangero, J.17
-
26
-
-
58149163446
-
Tissue-specific genetic control of splicing: Implications for the study of complex traits
-
Heinzen EL, Ge DL, Cronin KD, Maia JM, Shianna KV, Gabriel WN, Welsh- Bohmer KA, Hulette CM, Denny TN, Goldstein DB. 2008. Tissue-specific genetic control of splicing: Implications for the study of complex traits. PLoS Biol 6: 2869-2879.
-
(2008)
PLoS Biol
, vol.6
, pp. 2869-2879
-
-
Heinzen, E.L.1
Ge, D.L.2
Cronin, K.D.3
Maia, J.M.4
Shianna, K.V.5
Gabriel, W.N.6
Welsh-Bohmer, K.A.7
Hulette, C.M.8
Denny, T.N.9
Goldstein, D.B.10
-
27
-
-
40149087235
-
Data and theory point to mainly additive genetic variance for complex traits
-
doi: 10.1371/journal.pgen.1000008
-
Hill WG, GoddardME, Visscher PM. 2008. Data and theory point to mainly additive genetic variance for complex traits. PLoS Genet 4: e1000008. doi: 10.1371/journal.pgen.1000008.
-
(2008)
PLoS Genet
, vol.4
-
-
Hill, W.G.1
Goddard, M.E.2
Visscher, P.M.3
-
28
-
-
20144377218
-
Integrated transcriptional profiling and linkage analysis for identification of genes underlying disease
-
DOI 10.1038/ng1522
-
Hubner N, Wallace CA, Zimdahl H, Petretto E, Schulz H, Maciver F, Mueller M, Hummel O, Monti J, Zidek V, et al. 2005. Integrated transcriptional profiling and linkage analysis for identification of genes underlying disease. Nat Genet 37: 243-253. (Pubitemid 41716251)
-
(2005)
Nature Genetics
, vol.37
, Issue.3
, pp. 243-253
-
-
Hubner, N.1
Wallace, C.A.2
Zimdahl, H.3
Petretto, E.4
Schulz, H.5
Maciver, F.6
Mueller, M.7
Hummel, O.8
Monti, J.9
Zidek, V.10
Musilova, A.11
Kren, V.12
Causton, H.13
Game, L.14
Born, G.15
Schmidt, S.16
Muller, A.17
Cook, S.A.18
Kurtz, T.W.19
Whittaker, J.20
Pravenec, M.21
Aitman, T.J.22
more..
-
29
-
-
73349126396
-
Geographical genomics of human leukocyte gene expression variation in southern Morocco
-
Idaghdour Y, CzikaW, Shianna KV, Lee SH, Visscher PM, Martin HC, Miclaus K, Jadallah SJ, Goldstein DB, Wolfinger RD, et al. 2010. Geographical genomics of human leukocyte gene expression variation in southern Morocco. Nat Genet 42: 62-67.
-
(2010)
Nat Genet
, vol.42
, pp. 62-67
-
-
Idaghdour, Y.1
Czika, W.2
Shianna, K.V.3
Lee, S.H.4
Visscher, P.M.5
Martin, H.C.6
Miclaus, K.7
Jadallah, S.J.8
Goldstein, D.B.9
Wolfinger, R.D.10
-
30
-
-
77957890750
-
Tissue-specific and ubiquitous expression patterns from alternative promoters of human genes
-
doi: 10.1371/journal.pone.0012274
-
Jacox E, Gotea V, Ovcharenko I, Elnitski L. 2010. Tissue-specific and ubiquitous expression patterns from alternative promoters of human genes. PLoS ONE 5: 15. doi: 10.1371/journal.pone.0012274.
-
(2010)
PLoS ONE
, vol.5
, pp. 15
-
-
Jacox, E.1
Gotea, V.2
Ovcharenko, I.3
Elnitski, L.4
-
31
-
-
19544379881
-
Stochasticity in gene expression: From theories to phenotypes
-
DOI 10.1038/nrg1615
-
Kaern M, Elston TC, Blake WJ, Collins JJ. 2005. Stochasticity in gene expression: From theories to phenotypes. Nat Rev Genet 6: 451-464. (Pubitemid 40733890)
-
(2005)
Nature Reviews Genetics
, vol.6
, Issue.6
, pp. 451-464
-
-
Kaern, M.1
Elston, T.C.2
Blake, W.J.3
Collins, J.J.4
-
32
-
-
70149112830
-
Tissue effect on genetic control of transcript isoform variation
-
doi: 10.1371/journal.pgen.1000608
-
Kwan T, Grundberg E, Koka V, Ge B, Lam KCL, Dias C, Kindmark A, Mallmin H, Ljunggren O, Rivadeneira F, et al. 2009. Tissue effect on genetic control of transcript isoform variation. PLoS Genet 5: e1000608. doi: 10.1371/journal.pgen. 1000608.
-
(2009)
PLoS Genet
, vol.5
-
-
Kwan, T.1
Grundberg, E.2
Koka, V.3
Ge, B.4
Lam, K.C.L.5
Dias, C.6
Kindmark, A.7
Mallmin, H.8
Ljunggren, O.9
Rivadeneira, F.10
-
33
-
-
39749181521
-
Worldwide human relationships inferred from genome-wide patterns of variation
-
DOI 10.1126/science.1153717
-
Li JZ, Absher DM, Tang H, Southwick AM, Casto AM, Ramachandran S, Cann HM, Barsh GS, Feldman M, Cavalli-Sforza LL, et al. 2008. Worldwide human relationships inferred from genome-wide patterns of variation. Science 319: 1100-1104. (Pubitemid 351300793)
-
(2008)
Science
, vol.319
, Issue.5866
, pp. 1100-1104
-
-
Li, J.Z.1
Absher, D.M.2
Tang, H.3
Southwick, A.M.4
Casto, A.M.5
Ramachandran, S.6
Cann, H.M.7
Barsh, G.S.8
Feldman, M.9
Cavalli-Sforza, L.L.10
Myers, R.M.11
-
34
-
-
0032900220
-
Genetic and environmental contributions to size, color, shape, and other characteristics of melanocytic naevi in a sample of adolescent twins
-
DOI 10.1002/(SICI)1098-2272(1999)16:1<40::AID-GEPI4>3.0.CO;2-1
-
McGregor B, Pfitzner J, Zhu G, Grace M, Eldridge A, Pearson J, Mayne C, Aitken JF, Green AC, Martin NG. 1999. Genetic and environmental contributions to size, color, shape, and other characteristics of melanocytic naevi in a sample of adolescent twins. Genet Epidemiol 16: 40-53. (Pubitemid 29025128)
-
(1999)
Genetic Epidemiology
, vol.16
, Issue.1
, pp. 40-53
-
-
McGregor, B.1
Pfitzner, J.2
Zhu, G.3
Grace, M.4
Eldridge, A.5
Pearson, J.6
Mayne, C.7
Aitken, J.F.8
Green, A.C.9
Martin, N.G.10
-
35
-
-
33847293390
-
Replicated effects of sex and genotype on gene expression in human lymphoblastoid cell lines
-
DOI 10.1093/hmg/ddl456
-
McRae AF, Matigian NA, Vadlamudi L, Mulley JC, Mowry B, Martin NG, Berkovic SF, Hayward NK, Visscher PM. 2007. Replicated effects of sex and genotype on gene expression in human lymphoblastoid cell lines. Hum Mol Genet 16: 364-373. (Pubitemid 46323173)
-
(2007)
Human Molecular Genetics
, vol.16
, Issue.4
, pp. 364-373
-
-
McRae, A.F.1
Matigian, N.A.2
Vadlamudi, L.3
Mulley, J.C.4
Mowry, B.5
Martin, N.G.6
Berkovic, S.F.7
Hayward, N.K.8
Visscher, P.M.9
-
36
-
-
77950393137
-
Variability of gene expression profiles in human blood and lymphoblastoid cell lines
-
doi: 10.1186/1471-2164-11-96
-
Min JL, Barrett A, Watts T, Pettersson FH, Lockstone HE, Lindgren CM, Taylor JM, Allen M, Zondervan KT, McCarthy MI. 2010. Variability of gene expression profiles in human blood and lymphoblastoid cell lines. BMC Genomics 11: 96. doi: 10.1186/1471-2164-11-96.
-
(2010)
BMC Genomics
, vol.11
, pp. 96
-
-
Min, J.L.1
Barrett, A.2
Watts, T.3
Pettersson, F.H.4
Lockstone, H.E.5
Lindgren, C.M.6
Taylor, J.M.7
Allen, M.8
Zondervan, K.T.9
McCarthy, M.I.10
-
37
-
-
8844244726
-
Genetic inheritance of gene expression in human cell lines
-
DOI 10.1086/426461
-
Monks SA, Leonardson A, Zhu H, Cundiff P, Pietrusiak P, Edwards S, Phillips JW, Sachs A, Schadt EE. 2004. Genetic inheritance of gene expression in human cell lines. Am J Hum Genet 75: 1094-1105. (Pubitemid 39532076)
-
(2004)
American Journal of Human Genetics
, vol.75
, Issue.6
, pp. 1094-1105
-
-
Monks, S.A.1
Leonardson, A.2
Zhu, H.3
Cundiff, P.4
Pietrusiak, P.5
Edwards, S.6
Phillips, J.W.7
Sachs, A.8
Schadt, E.E.9
-
38
-
-
79952902493
-
From expression QTLs to personalized transcriptomics
-
Montgomery SB, Dermitzakis ET. 2011. From expression QTLs to personalized transcriptomics. Nat Rev Genet 12: 277-282.
-
(2011)
Nat Rev Genet
, vol.12
, pp. 277-282
-
-
Montgomery, S.B.1
Dermitzakis, E.T.2
-
39
-
-
77950458649
-
Transcriptome genetics using second generation sequencing in a Caucasian population
-
Montgomery SB, Sammeth M, Gutierrez-ArcelusM, Lach RP, Ingle C, Nisbett J, Guigo R, Dermitzakis ET. 2010. Transcriptome genetics using second generation sequencing in a Caucasian population. Nature 464: 773-777.
-
(2010)
Nature
, vol.464
, pp. 773-777
-
-
Montgomery, S.B.1
Sammeth, M.2
Gutierrez-Arcelus, M.3
Lach, R.P.4
Ingle, C.5
Nisbett, J.6
Guigo, R.7
Dermitzakis, E.T.8
-
40
-
-
0022553788
-
A routine method for the establishment of permanent growing lymphoblastoid cell lines
-
Neitzel H. 1986. A routine method for the establishment of permanent growing lymphoblastoid cell lines. Hum Genet 73: 320-326. (Pubitemid 16047212)
-
(1986)
Human Genetics
, vol.73
, Issue.4
, pp. 320-326
-
-
Neitzel, H.1
-
41
-
-
79952256739
-
The architecture of gene regulatory variation across multiple human tissues: The MuTHER Study
-
doi: 10.1371/journal.pgen.1002003
-
Nica AC, Parts L, Glass D, Nisbet J, Barrett A, Sekowska M, Travers M, Potter S, Grundberg E, Small K, et al. 2011. The architecture of gene regulatory variation across multiple human tissues: The MuTHER Study. PLoS Genet 7: e1002003. doi: 10.1371/journal.pgen.1002003.
-
(2011)
PLoS Genet
, vol.7
-
-
Nica, A.C.1
Parts, L.2
Glass, D.3
Nisbet, J.4
Barrett, A.5
Sekowska, M.6
Travers, M.7
Potter, S.8
Grundberg, E.9
Small, K.10
-
42
-
-
33750481513
-
Heritability and tissue specificity of expression quantitative trait loci
-
doi: 10.1371/journal.pgen.0020172
-
Petretto E, Mangion J, Dickens NJ, Cook SA, Kumaran MK, Lu H, Fischer J, Maatz H, Kren V, Pravenec M, et al. 2006. Heritability and tissue specificity of expression quantitative trait loci. PLoS Genet 2: e172. doi: 10.1371/journal.pgen.0020172.
-
(2006)
PLoS Genet
, vol.2
-
-
Petretto, E.1
Mangion, J.2
Dickens, N.J.3
Cook, S.A.4
Kumaran, M.K.5
Lu, H.6
Fischer, J.7
Maatz, H.8
Kren, V.9
Pravenec, M.10
-
43
-
-
77950460661
-
Understanding mechanisms underlying human gene expression variation with RNA sequencing
-
Pickrell JK, Marioni JC, Pai AA, Degner JF, Engelhardt BE, Nkadori E, Veyrieras J-B, Stephens M, Gilad Y, Pritchard JK. 2010. Understanding mechanisms underlying human gene expression variation with RNA sequencing. Nature 464: 768-772.
-
(2010)
Nature
, vol.464
, pp. 768-772
-
-
Pickrell, J.K.1
Marioni, J.C.2
Pai, A.A.3
Degner, J.F.4
Engelhardt, B.E.5
Nkadori, E.6
Veyrieras, J.-B.7
Stephens, M.8
Gilad, Y.9
Pritchard, J.K.10
-
44
-
-
58149159713
-
Effects of cis and trans genetic ancestry on gene expression in African Americans
-
doi: 10.1371/ journal.pgen.1000294
-
Price AL, Patterson N, Hancks DC, Myers S, Reich D, Cheung VG, Spielman RS. 2008. Effects of cis and trans genetic ancestry on gene expression in African Americans. PLoS Genet 4: e1000294. doi: 10.1371/ journal.pgen.1000294.
-
(2008)
PLoS Genet
, vol.4
-
-
Price, A.L.1
Patterson, N.2
Hancks, D.C.3
Myers, S.4
Reich, D.5
Cheung, V.G.6
Spielman, R.S.7
-
45
-
-
79952263851
-
Single-tissue and cross-tissue heritability of gene expression viaidentity-by-descent in related or unrelated individuals
-
doi: 10.1371/journal.pgen.1001317
-
Price AL, Helgason A, Thorleifsson G, McCarroll SA, Kong A, Stefansson K. 2011. Single-tissue and cross-tissue heritability of gene expression viaidentity-by-descent in related or unrelated individuals. PLoS Genet 7: e1001317. doi: 10.1371/journal.pgen.1001317.
-
(2011)
PLoS Genet
, vol.7
-
-
Price, A.L.1
Helgason, A.2
Thorleifsson, G.3
McCarroll, S.A.4
Kong, A.5
Stefansson, K.6
-
46
-
-
25444468618
-
Molecular biology - Noise in gene expression: Origins, consequences, and control
-
DOI 10.1126/science.1105891
-
Raser JM, O'Shea EK. 2005. Noise in gene expression: Origins, consequences, and control. Science 309: 2010-2013. (Pubitemid 41362308)
-
(2005)
Science
, vol.309
, Issue.5743
, pp. 2010-2013
-
-
Raser, J.M.1
O'Shea, E.K.2
-
47
-
-
77649299348
-
An atlas of combinatorial transcriptional regulation in mouse and man
-
Ravasi T, Suzuki H, Cannistraci CV, Katayama S, Bajic VB, Tan K, Akalin A, Schmeier S, Kanamori-Katayama M, Bertin N, et al. 2010. An atlas of combinatorial transcriptional regulation in mouse and man. Cell 140: 744-752.
-
(2010)
Cell
, vol.140
, pp. 744-752
-
-
Ravasi, T.1
Suzuki, H.2
Cannistraci, C.V.3
Katayama, S.4
Bajic, V.B.5
Tan, K.6
Akalin, A.7
Schmeier, S.8
Kanamori-Katayama, M.9
Bertin, N.10
-
48
-
-
0036924161
-
Genome-wide profiling of gene expression in 29 normal human tissues with a cDNA microarray
-
DOI 10.1093/dnares/9.2.35
-
Saito-Hisaminato A, Katagiri T, Kakiuchi S, Nakamura T, Tsunoda T, Nakamura Y. 2002. Genome-wide profiling of gene expression in 29 normal human tissues with a cDNA microarray. DNA Res 9: 35-45. (Pubitemid 36307043)
-
(2002)
DNA Research
, vol.9
, Issue.2
, pp. 35-45
-
-
Saito-Hisaminato, A.1
Katagiri, T.2
Kakiuchi, S.3
Nakamura, T.4
Tsunoda, T.5
Nakamura, Y.6
-
49
-
-
0242333835
-
Normalization of cDNA microarray data
-
DOI 10.1016/S1046-2023(03)00155-5
-
Smyth GK, Speed T. 2003. Normalization of cDNA microarray data. Methods 31: 265-273. (Pubitemid 37338763)
-
(2003)
Methods
, vol.31
, Issue.4
, pp. 265-273
-
-
Smyth, G.K.1
Speed, T.2
-
50
-
-
33846631884
-
Common genetic variants account for differences in gene expression among ethnic groups
-
DOI 10.1038/ng1955, PII NG1955
-
Spielman RS, Bastone LA, Burdick JT, Morley M, Ewens WJ, Cheung VG. 2007. Common genetic variants account for differences in gene expression among ethnic groups. Nat Genet 39: 226-231. (Pubitemid 46184354)
-
(2007)
Nature Genetics
, vol.39
, Issue.2
, pp. 226-231
-
-
Spielman, R.S.1
Bastone, L.A.2
Burdick, J.T.3
Morley, M.4
Ewens, W.J.5
Cheung, V.G.6
-
51
-
-
33847181678
-
Geneexpression variation within and among human populations
-
Storey JD, Madeoy J, Strout JL, Wurfel M, Ronald J, Akey JM. 2007. Geneexpression variation within and among human populations. Am J Hum Genet 80: 502-509.
-
(2007)
Am J Hum Genet
, vol.80
, pp. 502-509
-
-
Storey, J.D.1
Madeoy, J.2
Strout, J.L.3
Wurfel, M.4
Ronald, J.5
Akey, J.M.6
-
52
-
-
34548738566
-
Population genomics of human gene expression
-
DOI 10.1038/ng2142, PII NG2142
-
Stranger BE, Nica AC, Forrest MS, Dimas A, Bird CP, Beazley C, Ingle CE, Dunning M, Flicek P, Koller D, et al. 2007. Population genomics of human gene expression. Nat Genet 39: 1217-1224. (Pubitemid 47482691)
-
(2007)
Nature Genetics
, vol.39
, Issue.10
, pp. 1217-1224
-
-
Stranger, B.E.1
Nica, A.C.2
Forrest, M.S.3
Dimas, A.4
Bird, C.P.5
Beazley, C.6
Ingle, C.E.7
Dunning, M.8
Flicek, P.9
Koller, D.10
Montgomery, S.11
Tavare, S.12
Deloukas, P.13
Dermitzakis, E.T.14
-
53
-
-
6344269191
-
Power of the classical twin design revisited
-
DOI 10.1375/1369052042335250
-
Visscher PM. 2004. Power of the classical twin design revisited. Twin Res 7: 505-512. (Pubitemid 39390143)
-
(2004)
Twin Research
, vol.7
, Issue.5
, pp. 505-512
-
-
Visscher, P.M.1
-
54
-
-
33645760679
-
Assumption-free estimation of heritability from genome-wide identity-by-descent sharing between full siblings
-
doi: 10.1371/journal.pgen.0020041
-
Visscher PM, Medland SE, Ferreira MA, Morley KI, Zhu G, Cornes BK, Montgomery GW, Martin NG. 2006. Assumption-free estimation of heritability from genome-wide identity-by-descent sharing between full siblings. PLoS Genet 2: e41. doi: 10.1371/journal.pgen.0020041.
-
(2006)
PLoS Genet
, vol.2
-
-
Visscher, P.M.1
Medland, S.E.2
Ferreira, M.A.3
Morley, K.I.4
Zhu, G.5
Cornes, B.K.6
Montgomery, G.W.7
Martin, N.G.8
-
55
-
-
40849097776
-
Heritability in the genomics era-concepts and misconceptions
-
Visscher PM, Hill WG, Wray NR. 2008. Heritability in the genomics era-concepts and misconceptions. Nat Rev Genet 9: 255-266.
-
(2008)
Nat Rev Genet
, vol.9
, pp. 255-266
-
-
Visscher, P.M.1
Hill, W.G.2
Wray, N.R.3
-
56
-
-
0037452790
-
Individuality and variation in gene expression patterns in human blood
-
DOI 10.1073/pnas.252784499
-
Whitney AR, Diehn M, Popper SJ, Alizadeh AA, Boldrick JC, Relman DA, Brown PO. 2003. Individuality and variation in gene expression patterns in human blood. Proc Natl Acad Sci 100: 1896-1901. (Pubitemid 36254545)
-
(2003)
Proceedings of the National Academy of Sciences of the United States of America
, vol.100
, Issue.4
, pp. 1896-1901
-
-
Whitney, A.R.1
Diehn, M.2
Popper, S.J.3
Alizadeh, A.A.4
Boldrick, J.C.5
Relman, D.A.6
Brown, P.O.7
-
57
-
-
38849093314
-
The influence of genetic variation on gene expression
-
DOI 10.1101/gr.6981507
-
Williams RBH, Chan EKF, Cowley MJ, Little PFR. 2007. The influence of genetic variation on gene expression. Genome Res 17: 1707-1716. (Pubitemid 351359994)
-
(2007)
Genome Research
, vol.17
, Issue.12
, pp. 1707-1716
-
-
Williams, R.B.H.1
Chan, E.K.F.2
Cowley, M.J.3
Little, P.F.R.4
-
58
-
-
20144376345
-
Genome-wide midrange transcription profiles reveal expression level relationships in human tissue specification
-
DOI 10.1093/bioinformatics/bti042
-
Yanai I, Benjamin H, Shmoish M, Chalifa-Caspi V, Shklar M, Ophir R, Bar- Even A, Horn-Saban S, Safran M, Domany E, et al. 2005. Genome-wide midrange transcription profiles reveal expression level relationships in human tissue specification. Bioinformatics 21: 650-659. (Pubitemid 40424791)
-
(2005)
Bioinformatics
, vol.21
, Issue.5
, pp. 650-659
-
-
Yanai, I.1
Benjamin, H.2
Shmoish, M.3
Chalifa-Caspi, V.4
Shklar, M.5
Ophir, R.6
Bar-Even, A.7
Horn-Saban, S.8
Safran, M.9
Domany, E.10
Lancet, D.11
Shmueli, O.12
-
59
-
-
77956637896
-
Genetics and beyond-The transcriptome of human monocytes and disease susceptibility
-
doi: 10.1371/journal.pone.0010693
-
Zeller T, Wild P, Szymczak S, Rotival M, Schillert A, Castagne R, Maouche S, Germain M, Lackner K, Rossmann H, et al. 2010. Genetics and beyond-The transcriptome of human monocytes and disease susceptibility. PLoS ONE 5: e10693. doi: 10.1371/journal.pone.0010693.
-
(2010)
PLoS ONE
, vol.5
-
-
Zeller, T.1
Wild, P.2
Szymczak, S.3
Rotival, M.4
Schillert, A.5
Castagne, R.6
Maouche, S.7
Germain, M.8
Lackner, K.9
Rossmann, H.10
-
60
-
-
1542286776
-
Mammalian housekeeping genes evolve more slowly than tissue-specific genes
-
Zhang LQ, Li WH. 2004. Mammalian housekeeping genes evolve more slowly than tissue-specific genes. Mol Biol Evol 21: 236-239.
-
(2004)
Mol Biol Evol
, vol.21
, pp. 236-239
-
-
Zhang, L.Q.1
Li, W.H.2
-
61
-
-
48449104617
-
GOEAST: A web-based software toolkit for Gene Ontology enrichment analysis
-
Zheng Q, Wang XJ. 2008. GOEAST: A web-based software toolkit for Gene Ontology enrichment analysis. Nucleic Acids Res 36: W358-W363.
-
(2008)
Nucleic Acids Res
, vol.36
-
-
Zheng, Q.1
Wang, X.J.2
-
62
-
-
52949138674
-
On the nature of human housekeeping genes
-
Zhu J, He F, Hu S, Yu J. 2008a. On the nature of human housekeeping genes. Trends Genet 24: 481-484.
-
(2008)
Trends Genet
, vol.24
, pp. 481-484
-
-
Zhu, J.1
He, F.2
Hu, S.3
Yu, J.4
-
63
-
-
44349158988
-
How many human genes can be defined as housekeeping with current expression data?
-
doi: 10.1186/1471-2164-9-172
-
Zhu J, He F, Song S, Wang J, Yu J. 2008b. How many human genes can be defined as housekeeping with current expression data? BMC Genomics 9: 172. doi: 10.1186/1471-2164-9-172.
-
(2008)
BMC Genomics
, vol.9
, pp. 172
-
-
Zhu, J.1
He, F.2
Song, S.3
Wang, J.4
Yu, J.5
|