메뉴 건너뛰기




Volumn 11, Issue 2, 2012, Pages 217-228

A machine learning approach to identify hydrogenosomal proteins in trichomonas vaginalis

Author keywords

[No Author keywords available]

Indexed keywords

PROTOZOAL PROTEIN;

EID: 84856669080     PISSN: 15359778     EISSN: None     Source Type: Journal    
DOI: 10.1128/EC.05225-11     Document Type: Article
Times cited : (21)

References (83)
  • 1
    • 0032506350 scopus 로고    scopus 로고
    • A hydrogenosome with a genome
    • Akhmanova A, et al. 1998. A hydrogenosome with a genome. Nature 396:527-528.
    • (1998) Nature , vol.396 , pp. 527-528
    • Akhmanova, A.1
  • 2
    • 65549165405 scopus 로고    scopus 로고
    • Horizontal gene transfer in eukaryotic parasites:A case study of Entamoeba histolytica and Trichomonas vaginalis
    • Alsmark UC, Sicheritz-Ponten T, Foster PG, Hirt RP, Embley TM. 2009. Horizontal gene transfer in eukaryotic parasites: a case study of Entamoeba histolytica and Trichomonas vaginalis. Methods Mol. Biol. 532: 489-500.
    • (2009) Methods Mol. Biol , vol.532 , pp. 489-500
    • Alsmark, U.C.1    Sicheritz-Ponten, T.2    Foster, P.G.3    Hirt, R.P.4    Embley, T.M.5
  • 4
    • 0034069495 scopus 로고    scopus 로고
    • Gene ontology: Tool for the unification of biology
    • Ashburner M, et al. 2000. Gene ontology: tool for the unification of biology. The Gene Ontology Consortium. Nat. Genet. 25:25-29.
    • (2000) The Gene Ontology Consortium. Nat. Genet , vol.25 , pp. 25-29
    • Ashburner, M.1
  • 5
    • 58149200936 scopus 로고    scopus 로고
    • GiardiaDB and TrichDB:Integrated genomic resources for the eukaryotic protist pathogens Giardia lamblia and Trichomonas vaginalis
    • Aurrecoechea C, et al. 2009. GiardiaDB and TrichDB: integrated genomic resources for the eukaryotic protist pathogens Giardia lamblia and Trichomonas vaginalis. Nucleic Acids Res. 37:D526-530.
    • (2009) Nucleic Acids Res , vol.37
    • Aurrecoechea, C.1
  • 6
    • 44349092082 scopus 로고    scopus 로고
    • The Hydrogenosome as a drug target
    • Benchimol M. 2008. The Hydrogenosome as a drug target. Curr. Pharm. Des. 14:872-881.
    • (2008) Curr. Pharm. Des , vol.14 , pp. 872-881
    • Benchimol, M.1
  • 7
    • 0037255072 scopus 로고    scopus 로고
    • The SWISS-PROT protein knowledgebase and its supplement TrEMBL in 2003
    • Boeckmann B, et al. 2003. The SWISS-PROT protein knowledgebase and its supplement TrEMBL in 2003. Nucleic Acids Res. 31:365-370.
    • (2003) Nucleic Acids Res , vol.31 , pp. 365-370
    • Boeckmann, B.1
  • 8
    • 0030947850 scopus 로고    scopus 로고
    • Immunological detection and subcellular localization of Hsp70 and Hsp60 homologs in Trichomonas vaginalis
    • Bozner P. 1997. Immunological detection and subcellular localization of Hsp70 and Hsp60 homologs in Trichomonas vaginalis. J. Parasitol. 83: 224-229.
    • (1997) J. Parasitol , vol.83 , pp. 224-229
    • Bozner, P.1
  • 9
    • 0031010331 scopus 로고    scopus 로고
    • Targeting and translocationof proteins into the hydrogenosome ofthe protistTrichomo-nas: Similarities with mitochondrial protein import
    • Bradley PJ, Lahti CJ, Plumper E, Johnson PJ. 1997. Targeting and translocationof proteins into the hydrogenosome ofthe protistTrichomo-nas: similarities with mitochondrial protein import. EMBO J. 16:3484-3493.
    • (1997) EMBO J , vol.16 , pp. 3484-3493
    • Bradley, P.J.1    Lahti, C.J.2    Plumper, E.3    Johnson, P.J.4
  • 10
    • 27144489164 scopus 로고    scopus 로고
    • A tutorial on support vector machines for pattern recognition
    • Burges CJC. 1998. A tutorial on support vector machines for pattern recognition. Data Min. Knowl. Disc. 2:121-167.
    • (1998) Data Min. Knowl. Disc , vol.2 , pp. 121-167
    • Burges, C.J.C.1
  • 11
    • 33846528971 scopus 로고    scopus 로고
    • Draft genome sequence of the sexually transmitted pathogen Trichomonas vaginalis
    • Carlton JM, et al. 2007. Draft genome sequence of the sexually transmitted pathogen Trichomonas vaginalis. Science 315:207-212.
    • (2007) Science , vol.315 , pp. 207-212
    • Carlton, J.M.1
  • 13
    • 0010545497 scopus 로고
    • A Bayesian method for constructing Bayesian belief networks from databases
    • In D'Ambrosio D, Smets P, and Bonissone P, Morgan Kaufmann Publishers Inc., Los Angeles, CA
    • Cooper GF, Herskovits E. 1991. A Bayesian method for constructing Bayesian belief networks from databases, p 86-94. In D'Ambrosio D, Smets P, and Bonissone P (ed), The seventh conference on uncertainty in artificial intelligence. Morgan Kaufmann Publishers Inc., Los Angeles, CA.
    • (1991) The Seventh Conference On Uncertainty In Artificial Intelligence , pp. 86-94
    • Cooper, G.F.1    Herskovits, E.2
  • 14
    • 34249832377 scopus 로고
    • A Bayesian method for the induction of probabilistic networks from data
    • Cooper GF, Herskovits E. 1992. A Bayesian method for the induction of probabilistic networks from data. Mach. Learn. 9:309-347.
    • (1992) Mach. Learn , vol.9 , pp. 309-347
    • Cooper, G.F.1    Herskovits, E.2
  • 15
    • 0022094206 scopus 로고
    • Generalized best-first search strategies and the optimality of A&Z.ast
    • Dechter R, Pearl J. 1985. Generalized best-first search strategies and the optimality of A&z.ast;. J. Assoc. Comput. Machinery 32:505-536.
    • (1985) J. Assoc. Comput. Machinery , vol.32 , pp. 505-536
    • Dechter, R.1    Pearl, J.2
  • 16
  • 17
    • 0033897694 scopus 로고    scopus 로고
    • Origins of hydrogenosomes and mitochondria: Evolution and organelle biogenesis
    • Dyall SD, Johnson PJ. 2000. Origins of hydrogenosomes and mitochondria: evolution and organelle biogenesis. Curr. Opin. Microbiol. 3:404 - 411.
    • (2000) Curr. Opin. Microbiol. , vol.3 , pp. 404-411
    • Dyall, S.D.1    Johnson, P.J.2
  • 18
    • 0042733477 scopus 로고    scopus 로고
    • Trichomonas vaginalis Hmp35, a putative pore-forming hydrogenosomal membrane protein, can formacomplex inyeast mitochondria
    • Dyall SD, et al. 2003. Trichomonas vaginalis Hmp35, a putative pore-forming hydrogenosomal membrane protein, can formacomplex inyeast mitochondria. J. Biol. Chem. 278:30548-30561.
    • (2003) J. Biol. Chem , vol.278 , pp. 30548-30561
    • Dyall, S.D.1
  • 19
    • 3042666256 scopus 로고    scopus 로고
    • MUSCLE: Multiple sequence alignment with high accuracy and high throughput
    • Edgar RC. 2004. MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res. 32:1792-1797.
    • (2004) Nucleic Acids Res , vol.32 , pp. 1792-1797
    • Edgar, R.C.1
  • 20
    • 33645456207 scopus 로고    scopus 로고
    • Eukaryotic evolution, changes and challenges
    • Embley TM, Martin W. 2006. Eukaryotic evolution, changes and challenges. Nature 440:623-630.
    • (2006) Nature , vol.440 , pp. 623-630
    • Embley, T.M.1    Martin, W.2
  • 22
    • 0036529479 scopus 로고    scopus 로고
    • An efficient algorithm for large-scale detection of protein families
    • Enright AJ, Van Dongen S, Ouzounis CA. 2002. An efficient algorithm for large-scale detection of protein families. Nucleic Acids Res. 30:1575-1584.
    • (2002) Nucleic Acids Res , vol.30 , pp. 1575-1584
    • Enright, A.J.1    van Dongen, S.2    Ouzounis, C.A.3
  • 23
    • 34547793558 scopus 로고    scopus 로고
    • The origin of mitochondria in light of a fluid prokaryotic chromosome model
    • Esser C, Martin W, Dagan T. 2007. The origin of mitochondria in light of a fluid prokaryotic chromosome model. Biol. Lett. 3:180-184.
    • (2007) Biol. Lett , vol.3 , pp. 180-184
    • Esser, C.1    Martin, W.2    Dagan, T.3
  • 24
    • 33646023117 scopus 로고    scopus 로고
    • An introduction to ROC analysis
    • Fawcett T. 2006. An introduction to ROC analysis. Pattern Recognit. Lett. 27:861-874.
    • (2006) Pattern Recognit. Lett , vol.27 , pp. 861-874
    • Fawcett, T.1
  • 27
    • 0033525788 scopus 로고    scopus 로고
    • Mitochondrial evolution
    • Gray MW, Burger G, Lang BF. 1999. Mitochondrial evolution. Science 283:1476-1481.
    • (1999) Science , vol.283 , pp. 1476-1481
    • Gray, M.W.1    Burger, G.2    Lang, B.F.3
  • 29
    • 76749092270 scopus 로고    scopus 로고
    • The WEKA data mining software:An update
    • Hall M, et al. 2009. The WEKA data mining software: an update. SIGKDD Explor. Newls. 11:10-18.
    • (2009) SIGKDD Explor. Newls , vol.11 , pp. 10-18
    • Hall, M.1
  • 30
    • 34249761849 scopus 로고
    • Learning Bayesian networks:The combinationofknowledge and statistical data
    • Heckerman D, Geiger D, Chickering DM. 1995. Learning Bayesian networks: the combinationofknowledge and statistical data. Mach. Learn. 20:197-243.
    • (1995) Mach. Learn , vol.20 , pp. 197-243
    • Heckerman, D.1    Geiger, D.2    Chickering, D.M.3
  • 31
  • 33
    • 0025066941 scopus 로고
    • More powerful procedures for multiple significance testing
    • Hochberg Y, Benjamini Y. 1990. More powerful procedures for multiple significance testing. Stat. Med. 9:811-818.
    • (1990) Stat. Med , vol.9 , pp. 811-818
    • Hochberg, Y.1    Benjamini, Y.2
  • 34
    • 28844497273 scopus 로고    scopus 로고
    • Alternative pathwayofmetronidazole activation inTrichomonas vaginalishydrogeno-somes
    • Hrdý I, Cammack R, Stopka P, Kulda J, Tachezy J. 2005. Alternative pathwayofmetronidazole activation inTrichomonas vaginalishydrogeno-somes. Antimicrob. Agents Chemother. 49:5033-5036.
    • (2005) Antimicrob Agents Chemother , vol.49 , pp. 5033-5036
    • Hrdý, I.1    Cammack, R.2    Stopka, P.3    Kulda, J.4    Tachezy, J.5
  • 35
    • 10344254308 scopus 로고    scopus 로고
    • Trichomonas hydrogenosomes contain the NADH dehy-drogenase module of mitochondrial complex I
    • Hrdý I, et al. 2004. Trichomonas hydrogenosomes contain the NADH dehy-drogenase module of mitochondrial complex I. Nature 432:618 - 622.
    • (2004) Nature , vol.432 , pp. 618-622
    • Hrdý, I.1
  • 36
    • 0028874227 scopus 로고
    • Primary structure and eubacterial relationships of the pyruvate:Ferredoxin oxidoreductase of the amitochondriate eu-karyote Trichomonas vaginalis
    • Hrdý I, Müller M. 1995. Primary structure and eubacterial relationships of the pyruvate:ferredoxin oxidoreductase of the amitochondriate eu-karyote Trichomonas vaginalis. J. Mol. Evol. 41:388-396.
    • (1995) J. Mol. Evol , vol.41 , pp. 388-396
    • Hrdý, I.1    Müller, M.2
  • 37
    • 0142052944 scopus 로고    scopus 로고
    • A Bayesian networks approach for predicting protein-protein interactions from genomic data
    • Jansen R, et al. 2003. A Bayesian networks approach for predicting protein-protein interactions from genomic data. Science 302:449-453.
    • (2003) Science , vol.302 , pp. 449-453
    • Jansen, R.1
  • 38
    • 34250727580 scopus 로고    scopus 로고
    • The relationship between precision-recall and ROC curves
    • Association for Computing Machinery, New York, NY
    • Jesse D, Mark G. 2006. The relationship between precision-recall and ROC curves, p 233-240.In Proceedings of the 23rd International Conference on Machine Learning. Association for Computing Machinery, New York, NY.
    • (2006) In Proceedings of the 23rd International Conference On Machine Learning , pp. 233-240
    • Jesse, D.1    Mark, G.2
  • 40
    • 0033578684 scopus 로고    scopus 로고
    • Protein secondary structure prediction based on position-specific scoring matrices
    • Jones DT. 1999. Protein secondary structure prediction based on position-specific scoring matrices. J. Mol. Biol. 292:195-202.
    • (1999) J. Mol. Biol , vol.292 , pp. 195-202
    • Jones, D.T.1
  • 41
    • 0026691182 scopus 로고
    • The rapid generation of mutation data matrices from protein sequences
    • Jones DT, Taylor WR, Thornton JM. 1992. The rapid generation of mutation data matrices from protein sequences. Comput. Appl. Biosci. 8:275-282.
    • (1992) Comput. Appl. Biosci , vol.8 , pp. 275-282
    • Jones, D.T.1    Taylor, W.R.2    Thornton, J.M.3
  • 42
    • 47649126755 scopus 로고    scopus 로고
    • Integration of tail-anchored proteins into the mitochondrial outer membrane does not require any known import components
    • Kemper C, et al. 2008. Integration of tail-anchored proteins into the mitochondrial outer membrane does not require any known import components. J. Cell Sci. 121:1990-1998.
    • (2008) J. Cell Sci , vol.121 , pp. 1990-1998
    • Kemper, C.1
  • 43
    • 66449102561 scopus 로고    scopus 로고
    • DNA transfer from organelles to the nucleus: The idiosyncratic genetics of endosymbiosis
    • Kleine T, Maier UG, Leister D. 2009. DNA transfer from organelles to the nucleus: the idiosyncratic genetics of endosymbiosis. Annu. Rev. Plant Biol. 60:115-138.
    • (2009) Annu. Rev. Plant Biol , vol.60 , pp. 115-138
    • Kleine, T.1    Maier, U.G.2    Leister, D.3
  • 44
    • 0031381525 scopus 로고    scopus 로고
    • Wrappers for feature subset selection
    • Kohavi R, John GH. 1997. Wrappers for feature subset selection. Artif. Intell. 97:273-324.
    • (1997) Artif. Intell , vol.97 , pp. 273-324
    • Kohavi, R.1    John, G.H.2
  • 45
    • 0348093762 scopus 로고    scopus 로고
    • An essential role of Sam50 in the protein sorting and assembly machineryofthe mitochondrial outer membrane
    • Kozjak V, et al. 2003.An essential role of Sam50 in the protein sorting and assembly machineryofthe mitochondrial outer membrane. J.Biol. Chem. 278:48520-48523.
    • (2003) J.Biol. Chem , vol.278 , pp. 48520-48523
    • Kozjak, V.1
  • 46
    • 0033033761 scopus 로고    scopus 로고
    • Trichomonads, hydrogenosomes and drug resistance
    • Kulda J. 1999. Trichomonads, hydrogenosomes and drug resistance. Int. J. Parasitol. 29:199-212.
    • (1999) Int. J. Parasitol , vol.29 , pp. 199-212
    • Kulda, J.1
  • 47
    • 0020475449 scopus 로고
    • A simple method for displaying the hydropathic character of a protein
    • Kyte J, Doolittle RF. 1982. A simple method for displaying the hydropathic character of a protein. J. Mol. Biol. 157:105-132.
    • (1982) J. Mol. Biol , vol.157 , pp. 105-132
    • Kyte, J.1    Doolittle, R.F.2
  • 49
    • 0015731174 scopus 로고
    • Hydrogenosome, a cytoplasmic organelle of the anaerobic flagellate Tritrichomonas foetus, and its role in pyruvate metabolism
    • Lindmark DG, MüllerM. 1973. Hydrogenosome, a cytoplasmic organelle of the anaerobic flagellate Tritrichomonas foetus, and its role in pyruvate metabolism. J. Biol. Chem. 248:7724-7728.
    • (1973) J. Biol. Chem , vol.248 , pp. 7724-7728
    • Lindmark, D.G.1
  • 50
    • 77349095480 scopus 로고    scopus 로고
    • Evolution of macromolecular import pathways in mitochondria, hydrogenosomes and mitosomes
    • Lithgow T, Schneider A. 2010. Evolution of macromolecular import pathways in mitochondria, hydrogenosomes and mitosomes. Philos. Trans. R. Soc. Lond. B Biol. Sci. 365:799-817.
    • (2010) Philos. Trans. R. Soc. Lond. B Biol. Sci , vol.365 , pp. 799-817
    • Lithgow, T.1    Schneider, A.2
  • 51
    • 79551575924 scopus 로고    scopus 로고
    • Prediction and characterization of noncoding RNAs in C.elegans by integrating conservation, secondary structure, and high-throughput sequencing and array data
    • Lu ZJ, et al. 2011. Prediction and characterization of noncoding RNAs in C. elegans by integrating conservation, secondary structure, and high-throughput sequencing and array data. Genome Res. 21:276-285.
    • (2011) Genome Res , vol.21 , pp. 276-285
    • Lu, Z.J.1
  • 52
    • 78651285748 scopus 로고    scopus 로고
    • CDD: A Conserved Domain Database for the functional annotation of proteins
    • Marchler-Bauer A, et al. 2011. CDD: a Conserved Domain Database for the functional annotation of proteins. Nucleic Acids Res. 39:D225-D229.
    • (2011) Nucleic Acids Res , vol.39
    • Marchler-Bauer, A.1
  • 53
    • 54249088577 scopus 로고    scopus 로고
    • Protein import into hydrogenosomes of Trichomonas vaginalis involves both N-terminal and internal targeting signals:A case study of thioredoxin reductases
    • Mentel M, Zimorski V, Haferkamp P, Martin W, Henze K. 2008. Protein import into hydrogenosomes of Trichomonas vaginalis involves both N-terminal and internal targeting signals:a case study of thioredoxin reductases. Eukaryot. Cell 7:1750-1757.
    • (2008) Eukaryot Cell , vol.7 , pp. 1750-1757
    • Mentel, M.1    Zimorski, V.2    Haferkamp, P.3    Martin, W.4    Henze, K.5
  • 54
    • 0025047810 scopus 로고
    • Glucokinase and fructokinase of Trichomo-nas vaginalis and Tritrichomonas foetus
    • Mertens E, Müller M. 1990. Glucokinase and fructokinase of Trichomo-nas vaginalis and Tritrichomonas foetus. J. Protozool. 37:384-388.
    • (1990) J. Protozool , vol.37 , pp. 384-388
    • Mertens, E.1    Müller, M.2
  • 55
    • 40049097066 scopus 로고    scopus 로고
    • Factors associated with the prevalence and incidence of Trichomonas vaginalis infection among African American women in New York City who use drugs
    • Miller M, Liao Y, Gomez AM, Gaydos CA, D'Mellow D. 2008. Factors associated with the prevalence and incidence of Trichomonas vaginalis infection among African American women in New York City who use drugs. J. Infect. Dis. 197:503-509.
    • (2008) J. Infect. Dis , vol.197 , pp. 503-509
    • Miller, M.1    Liao, Y.2    Gomez, A.M.3    Gaydos, C.A.4    D'mellow, D.5
  • 56
    • 65249096152 scopus 로고    scopus 로고
    • Role of Tim50 in the transfer of precursor proteins from the outer to the inner membrane of mitochondria
    • Mokranjac D, et al. 2009. Role of Tim50 in the transfer of precursor proteins from the outer to the inner membrane of mitochondria. Mol. Biol. Cell 20:1400-1407.
    • (2009) Mol. Biol. Cell , vol.20 , pp. 1400-1407
    • Mokranjac, D.1
  • 58
    • 0022615157 scopus 로고
    • Reductive activation of nitroimidazoles in anaerobic microorganisms
    • Müller M. 1986. Reductive activation of nitroimidazoles in anaerobic microorganisms. Biochem. Pharmacol. 35:37-41.
    • (1986) Biochem Pharmacol , vol.35 , pp. 37-41
    • Müller, M.1
  • 59
    • 0027787578 scopus 로고
    • The hydrogenosome
    • Müller M. 1993. The hydrogenosome. J. Gen. Microbiol. 139:2879-2889.
    • (1993) J. Gen. Microbiol , vol.139 , pp. 2879-2889
    • Müller, M.1
  • 60
    • 0014757386 scopus 로고
    • A general method applicable to the search for similarities in the amino acid sequence of two proteins
    • Needleman SB, Wunsch CD. 1970. A general method applicable to the search for similarities in the amino acid sequence of two proteins. J. Mol. Biol. 48:443-453.
    • (1970) J. Mol. Biol , vol.48 , pp. 443-453
    • Needleman, S.B.1    Wunsch, C.D.2
  • 61
    • 54149091260 scopus 로고    scopus 로고
    • Analysis of two genomes from the mitochondrion-like organelle of the intestinal parasite Blastocystis: Complete sequences, gene content, and genome organization
    • Perez-Brocal V, Clark CG. 2008. Analysis of two genomes from the mitochondrion-like organelle of the intestinal parasite Blastocystis: complete sequences, gene content, and genome organization. Mol. Biol. Evol. 25:2475-2482.
    • (2008) Mol. Biol. Evol , vol.25 , pp. 2475-2482
    • Perez-Brocal, V.1    Clark, C.G.2
  • 62
    • 33846057724 scopus 로고    scopus 로고
    • NCBI reference sequences (RefSeq): A curated non-redundant sequence database of genomes, transcripts and proteins
    • Pruitt KD, Tatusova T, Maglott DR. 2007. NCBI reference sequences (RefSeq): a curated non-redundant sequence database of genomes, transcripts and proteins. Nucleic Acids Res. 35:D61-D65.
    • (2007) Nucleic Acids Res , vol.35
    • Pruitt, K.D.1    Tatusova, T.2    Maglott, D.R.3
  • 63
    • 33645060733 scopus 로고    scopus 로고
    • Fe-hydrogenase maturases in the hydrogenosomes of Trichomonas vaginalis
    • Pütz S, et al. 2006. Fe-hydrogenase maturases in the hydrogenosomes of Trichomonas vaginalis. Eukaryot. Cell 5:579-586.
    • (2006) Eukaryot. Cell , vol.5 , pp. 579-586
    • Pütz, S.1
  • 64
    • 20644461004 scopus 로고    scopus 로고
    • Rubrerythrin and peroxiredoxin: Two novel putative peroxidases in the hydrogeno-somes of the microaerophilic protozoon Trichomonas vaginalis
    • Pütz S, Gelius-Dietrich G, Piotrowski M, Henze K. 2005. Rubrerythrin and peroxiredoxin: two novel putative peroxidases in the hydrogeno-somes of the microaerophilic protozoon Trichomonas vaginalis. Mol. Biochem. Parasitol. 142:212-223.
    • (2005) Mol. Biochem. Parasitol , vol.142 , pp. 212-223
    • Pütz, S.1    Gelius-Dietrich, G.2    Piotrowski, M.3    Henze, K.4
  • 65
    • 80052868294 scopus 로고    scopus 로고
    • The core components of organelle biogenesis and membrane transport in the hydrogenosomes of Trichomonas vaginalis
    • Rada P, et al. 2011. The core components of organelle biogenesis and membrane transport in the hydrogenosomes of Trichomonas vaginalis. PLoS One 6:e24428.
    • (2011) PLoS One , vol.6
    • Rada, P.1
  • 66
    • 0034201441 scopus 로고    scopus 로고
    • EMBOSS: The European molecular biology open software suite
    • Rice P, Longden I, Bleasby A. 2000. EMBOSS: the European molecular biology open software suite. Trends Genet. 16:276-277.
    • (2000) Trends Genet , vol.16 , pp. 276-277
    • Rice, P.1    Longden, I.2    Bleasby, A.3
  • 67
    • 79551715713 scopus 로고    scopus 로고
    • Cell evolution: Gene transfer agents and the origin of mitochondria
    • Richards TA, Archibald JM. 2011. Cell evolution: gene transfer agents and the origin of mitochondria. Curr. Biol. 21:R112-114.
    • (2011) Curr. Biol , vol.21
    • Richards, T.A.1    Archibald, J.M.2
  • 68
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou N, Nei M. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4:406-425.
    • (1987) Mol. Biol. Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 69
    • 0035827328 scopus 로고    scopus 로고
    • Microbial genes in the human genome: Lateral transfer or gene loss?
    • Salzberg SL, White O, Peterson J, Eisen JA. 2001. Microbial genes in the human genome: lateral transfer or gene loss? Science 292:1903-1906.
    • (2001) Science , vol.292 , pp. 1903-1906
    • Salzberg, S.L.1    White, O.2    Peterson, J.3    Eisen, J.A.4
  • 70
    • 2942624227 scopus 로고    scopus 로고
    • Advances in the prediction of protein targeting signals
    • Schneider G, Fechner U. 2004. Advances in the prediction of protein targeting signals. Proteomics 4:1571-1580.
    • (2004) Proteomics , vol.4 , pp. 1571-1580
    • Schneider, G.1    Fechner, U.2
  • 72
    • 70350708134 scopus 로고    scopus 로고
    • Mgene: Accurate SVM-based gene finding with an application to nematode genomes
    • Schweikert G, et al. 2009. mGene: accurate SVM-based gene finding with an application to nematode genomes. Genome Res. 19:2133-2143.
    • (2009) Genome Res , vol.19 , pp. 2133-2143
    • Schweikert, G.1
  • 73
    • 77957955710 scopus 로고    scopus 로고
    • Mitochondrion-related organelles in eu-karyotic protists
    • Shiflett AM, Johnson PJ. 2010. Mitochondrion-related organelles in eu-karyotic protists. Annu. Rev. Microbiol. 64:409-429.
    • (2010) Annu. Rev. Microbiol , vol.64 , pp. 409-429
    • Shiflett, A.M.1    Johnson, P.J.2
  • 74
    • 3142746681 scopus 로고    scopus 로고
    • Mitochondrial-type assembly of FeS centers in the hydrogenosomes of the amitochondriate eukaryote Trichomonas vagina-lis
    • U. S. A
    • Sutak R, et al. 2004. Mitochondrial-type assembly of FeS centers in the hydrogenosomes of the amitochondriate eukaryote Trichomonas vagina-lis. Proc. Natl. Acad. Sci. U. S. A. 101:10368-10373.
    • (2004) Proc. Natl. Acad. Sci , vol.101 , pp. 10368-10373
    • Sutak, R.1
  • 75
    • 0034804608 scopus 로고    scopus 로고
    • Mitochondrial type iron-sulfur cluster assembly in the amitochondriate eukaryotes Trichomonas vaginalis and Giardia intestinalis, as indicated by the phylogeny of IscS
    • Tachezy J, Sanchez LB, Müller M. 2001. Mitochondrial type iron-sulfur cluster assembly in the amitochondriate eukaryotes Trichomonas vaginalis and Giardia intestinalis, as indicated by the phylogeny of IscS. Mol. Biol. Evol. 18:1919-1928.
    • (2001) Mol. Biol. Evol , vol.18 , pp. 1919-1928
    • Tachezy, J.1    Sanchez, L.B.2    Müller, M.3
  • 76
    • 0344633597 scopus 로고    scopus 로고
    • Mitochondrial remnant organelles of Giardia function in iron-sulphur protein maturation
    • Tovar J, et al. 2003. Mitochondrial remnant organelles of Giardia function in iron-sulphur protein maturation. Nature 426:172-176.
    • (2003) Nature , vol.426 , pp. 172-176
    • Tovar, J.1
  • 77
    • 0037447049 scopus 로고    scopus 로고
    • Mechanisms of protein import into mitochondria
    • Truscott KN, Brandner K, Pfanner N. 2003. Mechanisms of protein import into mitochondria. Curr. Biol. 13:R326-337.
    • (2003) Curr. Biol , vol.13
    • Truscott, K.N.1    Brandner, K.2    Pfanner, N.3
  • 78
    • 0035138734 scopus 로고    scopus 로고
    • Drug targets and mechanisms of resistance in the anaerobic protozoa
    • Upcroft P, Upcroft JA. 2001. Drug targets and mechanisms of resistance in the anaerobic protozoa. Clin. Microbiol. Rev. 14:150-164.
    • (2001) Clin. Microbiol Rev , vol.14 , pp. 150-164
    • Upcroft, P.1    Upcroft, J.A.2
  • 79
    • 38349131330 scopus 로고    scopus 로고
    • Acetate:Succinate CoA-transferase in the hydrogenosomes of Trichomonas vaginalis: Identification and characterization
    • van Grinsven KW, et al. 2008. Acetate:succinate CoA-transferase in the hydrogenosomes of Trichomonas vaginalis: identification and characterization. J. Biol. Chem. 283:1411-1418.
    • (2008) J. Biol. Chem , vol.283 , pp. 1411-1418
    • van Grinsven, K.W.1
  • 81
    • 56349137240 scopus 로고    scopus 로고
    • Biogenesis of mitochondrial outer membrane proteins
    • Walther DM, Rapaport D. 2009. Biogenesis of mitochondrial outer membrane proteins. Biochim. Biophys. Acta 1793:42-51.
    • (2009) Biochim. Biophys Acta , vol.1793 , pp. 42-51
    • Walther, D.M.1    Rapaport, D.2
  • 82
    • 51249116888 scopus 로고    scopus 로고
    • Complete circular DNA in the mitochondria-like organelles of Blastocystis hominis
    • Wawrzyniak I, et al. 2008. Complete circular DNA in the mitochondria-like organelles of Blastocystis hominis. Int. J. Parasitol. 38:1377-1382.
    • (2008) Int. J. Parasitol , vol.38 , pp. 1377-1382
    • Wawrzyniak, I.1
  • 83
    • 77952593611 scopus 로고    scopus 로고
    • Hydrogenosomes of laboratory-induced metronidazole-resistant Trichomo-nas vaginalis lines are downsized while those from clinically metronidazole-resistant isolates are not
    • Wright JM, Webb RI, O'Donoghue P, Upcroft P, Upcroft JA. 2010. Hydrogenosomes of laboratory-induced metronidazole-resistant Trichomo-nas vaginalis lines are downsized while those from clinically metronidazole-resistant isolates are not. J. Eukaryot. Microbiol. 57:171-176.
    • (2010) J. Eukaryot. Microbiol , vol.57 , pp. 171-176
    • Wright, J.M.1    Webb, R.I.2    O'Donoghue, P.3    Upcroft, P.4    Upcroft, J.A.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.