SCOPUS 정보 검색 플랫폼

ChemBioChem

Volumn 12, Issue 18, 2011, Pages 2871-2880

Design and synthesis of caged fluorescent nucleotides and application to live-cell RNA imaging

(6) Ikeda, Shuji a Kubota, Takeshi a Wang, Dan Ohtan a,b Yanagisawa, Hiroyuki a Umemoto, Tadashi a Okamoto, Akimitsu a

a RIKEN (Japan)

b KYOTO UNIVERSITY (Japan)

Author keywords

Fluorescence spectroscopy; Fluorescent probes; Nucleotides; Photochemistry; Photolysis; RNA recognition

Indexed keywords

COMPLEMENTARY RNA; FLUORESCENT DYE; NUCLEOTIDE; RNA; THIAZOLE;

ANIMAL CELL; ARTICLE; FLUORESCENCE IMAGING; HELA CELL; HUMAN; HUMAN CELL; HYBRIDIZATION; IRRADIATION; NONHUMAN; NUCLEIC ACID PROBE; NUCLEOTIDE METABOLISM; PHOTOACTIVATION; PHOTOLYSIS; PRIORITY JOURNAL; RAT;

DRUG DESIGN; FLUORESCENCE; NUCLEOTIDES; RNA;

EID: 83355171300 PISSN: 14394227 EISSN: 14397633 Source Type: Journal
DOI: 10.1002/cbic.201100523 Document Type: Article

Times cited : (15)

References (57)

1
- 0031585874
- S. Paillasson, M. Van De Corput, R. W. Dirks, H. J. Tanke, M. Robert-Nicoud, X. Ronot, Exp. Cell Res. 1997, 231, 226-233.
- (1997) Exp. Cell Res. , vol.231 , pp. 226-233
- Paillasson, S.¹ Van De Corput, M.² Dirks, R.W.³ Tanke, H.J.⁴ Robert-Nicoud, M.⁵ Ronot, X.⁶

2
- 0033137335
- K. Yamana, R. Iwase, S. Furutani, H. Tsuchida, H. Zako, T. Yamaoka, A. Murakami, Nucleic Acids Res. 1999, 27, 2387-2392.
- (1999) Nucleic Acids Res. , vol.27 , pp. 2387-2392
- Yamana, K.¹ Iwase, R.² Furutani, S.³ Tsuchida, H.⁴ Zako, H.⁵ Yamaoka, T.⁶ Murakami, A.⁷

3
- 0002726408
- e;
- C. Molenaar, S. A. Marras, J. C. M. Slats, J.-C. Truffert, M. Lemaître, A. K. Raap, R. W. Dirks, H. J. Tanke, Nucleic Acids Res. 2001, 29, e89.
- (2001) Nucleic Acids Res. , vol.29 , pp. 89
- Molenaar, C.¹ Marras, S.A.² Slats, J.C.M.³ Truffert, J.-C.⁴ Lemaître, M.⁵ Raap, A.K.⁶ Dirks, R.W.⁷ Tanke, H.J.⁸

4
- 0035106632
- R. W. Dirks, C. Molenaar, H. J. Tanke, Histochem. Cell Biol. 2001, 115, 3-11.
- (2001) Histochem. Cell Biol. , vol.115 , pp. 3-11
- Dirks, R.W.¹ Molenaar, C.² Tanke, H.J.³

5
- 33751536386
- J. Pernthaler, F.-O. Glöckner, W. Schönhuber, R. Amann, Methods Microbiol. 2001, 30, 207-226.
- (2001) Methods Microbiol. , vol.30 , pp. 207-226
- Pernthaler, J.¹ Glöckner, F.-O.² Schönhuber, W.³ Amann, R.⁴

6
- 12844274892
- G. J. Smith, T. R. Sosnick, N. F. Scherer, T. Pan, RNA 2005, 11, 234-239.
- (2005) RNA , vol.11 , pp. 234-239
- Smith, G.J.¹ Sosnick, T.R.² Scherer, N.F.³ Pan, T.⁴

7
- 33645962235
- U. Asseline, Curr. Org. Chem. 2006, 10, 491-518.
- (2006) Curr. Org. Chem. , vol.10 , pp. 491-518
- Asseline, U.¹

8
- 34447334212
- A. A. Martí, S. Jockusch, N. Stevens, J. Ju, N. J. Turro, Acc. Chem. Res. 2007, 40, 402-409.
- (2007) Acc. Chem. Res. , vol.40 , pp. 402-409
- Martí, A.A.¹ Jockusch, S.² Stevens, N.³ Ju, J.⁴ Turro, N.J.⁵

9
- 33845609243
- A. P. Silverman, E. T. Kool, Adv. Clin. Chem. 2007, 43, 79-115.
- (2007) Adv. Clin. Chem. , vol.43 , pp. 79-115
- Silverman, A.P.¹ Kool, E.T.²

10
- 58749101200
- K. Tokunaga, T. Tani, Curr. Protoc. Cell Biol. 2008, 22.13.1-22.13.20.
- (2008) Curr. Protoc. Cell Biol.
- Tokunaga, K.¹ Tani, T.²

11
- 33646847806
- R. W. Dirks, H. J. Tanke, BioTechniques 2006, 40, 489-496.
- (2006) BioTechniques , vol.40 , pp. 489-496
- Dirks, R.W.¹ Tanke, H.J.²

12
- 77956272199
- 2nd ed. (Eds.: R. D. Goldman, J. R. Swedlow, D. L. Spector), Cold Spring Harbor Laboratory Press, New York
- A. Bancaud, S. Huet, G. Rabut, J. Ellenberg in Live Cell Imaging: A Laboratory Manual, 2nd ed. (Eds.: R. D. Goldman, J. R. Swedlow, D. L. Spector), Cold Spring Harbor Laboratory Press, New York, 2010, pp. 67-94.
- (2010) Live Cell Imaging: A Laboratory Manual , pp. 67-94
- Bancaud, A.¹ Huet, S.² Rabut, G.³ Ellenberg, J.⁴

13
- 0035374872
- J. Lippincott-Schwartz, E. Snappl, A. Kenworthy, Nat. Rev. Mol. Cell Biol. 2001, 2, 444-456.
- (2001) Nat. Rev. Mol. Cell Biol. , vol.2 , pp. 444-456
- Lippincott-Schwartz, J.¹ Snappl, E.² Kenworthy, A.³

14
- 0036520682
- N. Klonis, M. Rug, I. Harper, M. Wickham, A. Cowman, L. Tilley, Eur. Biophys. J. 2002, 31, 36-51.
- (2002) Eur. Biophys. J. , vol.31 , pp. 36-51
- Klonis, N.¹ Rug, M.² Harper, I.³ Wickham, M.⁴ Cowman, A.⁵ Tilley, L.⁶

15
- 0030763228
- J. Ellenberg, E. D. Siggia, J. E. Moreira, C. L. Smith, J. F. Presley, H. J. Worman, J. Lippincott-Schwartz, J. Cell Biol. 1997, 138, 1193-1206.
- (1997) J. Cell Biol. , vol.138 , pp. 1193-1206
- Ellenberg, J.¹ Siggia, E.D.² Moreira, J.E.³ Smith, C.L.⁴ Presley, J.F.⁵ Worman, H.J.⁶ Lippincott-Schwartz, J.⁷

16
- 0037450726
- K. E. Handwerger, C. Murphy, J. G. Gall, J. Cell Biol. 2003, 160, 495-504.
- (2003) J. Cell Biol. , vol.160 , pp. 495-504
- Handwerger, K.E.¹ Murphy, C.² Gall, J.G.³

17
- 0029784190
- N. B. Cole, C. L. Smith, N. Sciaky, M. Terasaki, M. Edidin, J. Lippincott-Schwartz, Science 1996, 273, 797-801.
- (1996) Science , vol.273 , pp. 797-801
- Cole, N.B.¹ Smith, C.L.² Sciaky, N.³ Terasaki, M.⁴ Edidin, M.⁵ Lippincott-Schwartz, J.⁶

18
- 0035904235
- N. Belgareh, G. Rabut, S. Wei Baï, M. van Overbeek, J. Beaudouin, N. Daigle, O. V. Zatsepina, F. Pasteau, V. Labas, M. Fromont-Racine, J. Ellengerg, V. Doye, J. Cell Biol. 2001, 154, 1147-1160.
- (2001) J. Cell Biol. , vol.154 , pp. 1147-1160
- Belgareh, N.¹ Rabut, G.² Wei Baï, S.³ van Overbeek, M.⁴ Beaudouin, J.⁵ Daigle, N.⁶ Zatsepina, O.V.⁷ Pasteau, F.⁸ Labas, V.⁹ Fromont-Racine, M.¹⁰ Ellengerg, J.¹¹ Doye, V.¹²

19
- 0034611785
- R. D. Phair, T. Misteli, Nature 2000, 404, 604-609.
- (2000) Nature , vol.404 , pp. 604-609
- Phair, R.D.¹ Misteli, T.²

20
- 2242433534
- M. Dundr, U. Hoffmann-Rohrer, Q. Hu, I. Grummt, L. I. Rothblum, R. D. Phair, T. Misteli, Science 2002, 298, 1623-1626.
- (2002) Science , vol.298 , pp. 1623-1626
- Dundr, M.¹ Hoffmann-Rohrer, U.² Hu, Q.³ Grummt, I.⁴ Rothblum, L.I.⁵ Phair, R.D.⁶ Misteli, T.⁷

21
- 0036968859
- M. Dundr, J. G. McNally, J. Cohen, T. Misteli, J. Struct. Biol. 2002, 140, 92-99.
- (2002) J. Struct. Biol. , vol.140 , pp. 92-99
- Dundr, M.¹ McNally, J.G.² Cohen, J.³ Misteli, T.⁴

22
- 0024372719
- C. L. Berger, E. C. Svensson, D. D. Thomas, Proc. Natl. Acad. Sci. USA 1989, 86, 8753-8757.
- (1989) Proc. Natl. Acad. Sci. USA , vol.86 , pp. 8753-8757
- Berger, C.L.¹ Svensson, E.C.² Thomas, D.D.³

23
- 33845279305
- J. W. Walker, G. P. Reid, J. A. McCray, D. R. Trentham, J. Am. Chem. Soc. 1988, 110, 7170-7177.
- (1988) J. Am. Chem. Soc. , vol.110 , pp. 7170-7177
- Walker, J.W.¹ Reid, G.P.² McCray, J.A.³ Trentham, D.R.⁴

24
- 0031776739
- J. A. Dantzig, H. Higuchi, Y. E. Goldman, Methods Enzymol. 1998, 291, 307-348.
- (1998) Methods Enzymol. , vol.291 , pp. 307-348
- Dantzig, J.A.¹ Higuchi, H.² Goldman, Y.E.³

25
- 0027480532
- S. R. Adams, R. Y. Tsien, Annu. Rev. Physiol. 1993, 55, 755-784.
- (1993) Annu. Rev. Physiol. , vol.55 , pp. 755-784
- Adams, S.R.¹ Tsien, R.Y.²

26
- 0024577919
- J. A. McCray, D. R. Trentham, Annu. Rev. Biophys. Biophys. Chem. 1989, 18, 239-270.
- (1989) Annu. Rev. Biophys. Biophys. Chem. , vol.18 , pp. 239-270
- McCray, J.A.¹ Trentham, D.R.²

27
- 0031744556
- T. J. Mitchison, K. E. Sawin, J. A. Theriot, K. Gee, A. Mallavarapu, Methods Enzymol. 1998, 291, 63-78.
- (1998) Methods Enzymol. , vol.291 , pp. 63-78
- Mitchison, T.J.¹ Sawin, K.E.² Theriot, J.A.³ Gee, K.⁴ Mallavarapu, A.⁵

28
- 33746734322
- G. Mayer, A. Heckel, Angew. Chem. 2006, 118, 5020-5042; Angew. Chem. Int. Ed. 2006, 45, 4900-4921.
- (2006) Angew. Chem. 2006, 118, 5020-5042; Angew. Chem. Int. Ed. , vol.45 , pp. 4900-4921
- Mayer, G.¹ Heckel, A.²

29
- 0037151617
- S. Sando, E. T. Kool, J. Am. Chem. Soc. 2002, 124, 9686-9687.
- (2002) J. Am. Chem. Soc. , vol.124 , pp. 9686-9687
- Sando, S.¹ Kool, E.T.²

30
- 0037020361
- A. Mahara, R. Iwase, T. Sakamoto, K. Yamana, T. Yamaoka, A. Murakami, Angew. Chem. 2002, 114, 3800-3802; Angew. Chem. Int. Ed. 2002, 41, 3648-3650.
- (2002) Angew. Chem. 2002, 114, 3800-3802; Angew. Chem. Int. Ed. , vol.41 , pp. 3648-3650
- Mahara, A.¹ Iwase, R.² Sakamoto, T.³ Yamana, K.⁴ Yamaoka, T.⁵ Murakami, A.⁶

31
- 56749169576
- N. Nitin, G. Bao, Bioconjugate Chem. 2008, 19, 2205-2211.
- (2008) Bioconjugate Chem. , vol.19 , pp. 2205-2211
- Nitin, N.¹ Bao, G.²

32
- 34347254658
- M. M. Mhlanga, S. Tyagi, Nat. Protocols 2006, 1, 1392-1398.
- (2006) Nat. Protocols , vol.1 , pp. 1392-1398
- Mhlanga, M.M.¹ Tyagi, S.²

33
- 16444382036
- X.-H. Peng, Z.-H. Cao, J.-T. Xia, G. W. Carlson, M. M. Lewis, W. C. Wood, L. Yang, Cancer Res. 2005, 65, 1909-1917.
- (2005) Cancer Res. , vol.65 , pp. 1909-1917
- Peng, X.-H.¹ Cao, Z.-H.² Xia, J.-T.³ Carlson, G.W.⁴ Lewis, M.M.⁵ Wood, W.C.⁶ Yang, L.⁷

34
- 50249187299
- S. Ikeda, A. Okamoto, Chem. Asian J. 2008, 3, 958-968.
- (2008) Chem. Asian J. , vol.3 , pp. 958-968
- Ikeda, S.¹ Okamoto, A.²

35
- 50249090083
- S. Ikeda, T. Kubota, K. Kino, A. Okamoto, Bioconjugate Chem. 2008, 19, 1719-1725.
- (2008) Bioconjugate Chem. , vol.19 , pp. 1719-1725
- Ikeda, S.¹ Kubota, T.² Kino, K.³ Okamoto, A.⁴

36
- 70349932066
- S. Ikeda, T. Kubota, M. Yuki, A. Okamoto, Angew. Chem. 2009, 121, 6602-6606; Angew. Chem. Int. Ed. 2009, 48, 6480-6484.
- (2009) Angew. Chem. 2009, 121, 6602-6606; Angew. Chem. Int. Ed. , vol.48 , pp. 6480-6484
- Ikeda, S.¹ Kubota, T.² Yuki, M.³ Okamoto, A.⁴

37
- 79956284022
- S. Ikeda, H. Yanagisawa, A. Nakamura, D. O. Wang, M. Yuki, A. Okamoto, Org. Biomol. Chem. 2011, 9, 4199-4204.
- (2011) Org. Biomol. Chem. , vol.9 , pp. 4199-4204
- Ikeda, S.¹ Yanagisawa, H.² Nakamura, A.³ Wang, D.O.⁴ Yuki, M.⁵ Okamoto, A.⁶

38
- 58349122886
- T. Kubota, S. Ikeda, A. Okamoto, Bull. Chem. Soc. Jpn. 2009, 82, 110-117.
- (2009) Bull. Chem. Soc. Jpn. , vol.82 , pp. 110-117
- Kubota, T.¹ Ikeda, S.² Okamoto, A.³

39
- 67649211935
- T. Kubota, S. Ikeda, H. Yanagisawa, M. Yuki, A. Okamoto, Bioconjugate Chem. 2009, 20, 1256-1261.
- (2009) Bioconjugate Chem. , vol.20 , pp. 1256-1261
- Kubota, T.¹ Ikeda, S.² Yanagisawa, H.³ Yuki, M.⁴ Okamoto, A.⁵

40
- 70350445579
- S. Ikeda, M. Yuki, H. Yanagisawa, A. Okamoto, Tetrahedron Lett. 2009, 50, 7191-7195.
- (2009) Tetrahedron Lett. , vol.50 , pp. 7191-7195
- Ikeda, S.¹ Yuki, M.² Yanagisawa, H.³ Okamoto, A.⁴

41
- 75149196251
- S. Ikeda, T. Kubota, M. Yuki, H. Yanagisawa, S. Tsuruma, A. Okamoto, Org. Biomol. Chem. 2010, 8, 546-551.
- (2010) Org. Biomol. Chem. , vol.8 , pp. 546-551
- Ikeda, S.¹ Kubota, T.² Yuki, M.³ Yanagisawa, H.⁴ Tsuruma, S.⁵ Okamoto, A.⁶

42
- 75149139045
- A. Lezhava, T. Ishidao, Y. Ishizu, K. Naito, T. Hanami, A. Katayama, Y. Kogo, T. Soma, S. Ikeda, K. Murakami, C. Nogawa, M. Itoh, Y. Mitani, M. Harbers, A. Okamoto, Y. Hayashizaki, Hum. Mutat. 2010, 31, 208-217.
- (2010) Hum. Mutat. , vol.31 , pp. 208-217
- Lezhava, A.¹ Ishidao, T.² Ishizu, Y.³ Naito, K.⁴ Hanami, T.⁵ Katayama, A.⁶ Kogo, Y.⁷ Soma, T.⁸ Ikeda, S.⁹ Murakami, K.¹⁰ Nogawa, C.¹¹ Itoh, M.¹² Mitani, Y.¹³ Harbers, M.¹⁴ Okamoto, A.¹⁵ Hayashizaki, Y.¹⁶

43
- 77953657090
- A. Okamoto, Chem. Rec. 2010, 10, 188-196.
- (2010) Chem. Rec. , vol.10 , pp. 188-196
- Okamoto, A.¹

44
- 77958552723
- e;
- T. Kubota, S. Ikeda, H. Yanagisawa, M. Yuki, A. Okamoto, PLoS ONE 2010, 5, e13003.
- (2010) PLoS ONE , vol.5 , pp. 13003
- Kubota, T.¹ Ikeda, S.² Yanagisawa, H.³ Yuki, M.⁴ Okamoto, A.⁵

45
- 78650323199
- K. Sugizaki, A. Okamoto, Bioconjugate Chem. 2010, 21, 2276-2281.
- (2010) Bioconjugate Chem. , vol.21 , pp. 2276-2281
- Sugizaki, K.¹ Okamoto, A.²

46
- 80052739693
- S. Ikeda, T. Kubota, D. Ohtan Wang, H. Yanagisawa, M. Yuki, A. Okamoto, Org. Biomol. Chem. 2011, 9, 6598-6603.
- (2011) Org. Biomol. Chem. , vol.9 , pp. 6598-6603
- Ikeda, S.¹ Kubota, T.² Ohtan Wang, D.³ Yanagisawa, H.⁴ Yuki, M.⁵ Okamoto, A.⁶

47
- 80051779505
- T. Kubota, S. Ikeda, H. Yanagisawa, M. Yuki, A. Okamoto, Bioconjugate Chem. 2011, 22, 1625-1630.
- (2011) Bioconjugate Chem. , vol.22 , pp. 1625-1630
- Kubota, T.¹ Ikeda, S.² Yanagisawa, H.³ Yuki, M.⁴ Okamoto, A.⁵

48
- 75449145408
- M. Kasha, Radiat. Res. 1963, 20, 55-70.
- (1963) Radiat. Res. , vol.20 , pp. 55-70
- Kasha, M.¹

49
- 84913521777
- M. Kasha, H. R. Rawls, M. A. El-Bayoumi, Pure Appl. Chem. 1965, 11, 371-392.
- (1965) Pure Appl. Chem. , vol.11 , pp. 371-392
- Kasha, M.¹ Rawls, H.R.² El-Bayoumi, M.A.³

50
- 0000453184
- G. S. Levinson, W. T. Simpson, W. Curtis, J. Am. Chem. Soc. 1957, 79, 4314-4320.
- (1957) J. Am. Chem. Soc. , vol.79 , pp. 4314-4320
- Levinson, G.S.¹ Simpson, W.T.² Curtis, W.³

51
- 0000065351
- E. G. McRae, M. Kasha, J. Chem. Phys. 1958, 28, 721-722.
- (1958) J. Chem. Phys. , vol.28 , pp. 721-722
- McRae, E.G.¹ Kasha, M.²

52
- 0032723726
- R. G. Dyer, K. D. Turnbull, J. Org. Chem. 1999, 64, 7988-7995.
- (1999) J. Org. Chem. , vol.64 , pp. 7988-7995
- Dyer, R.G.¹ Turnbull, K.D.²

53
- 2142662109
- C. Molenaar, A. Abdulle, A. Gena, H. J. Tanke, R. W. Dirks, J. Cell Biol. 2004, 165, 191-202.
- (2004) J. Cell Biol. , vol.165 , pp. 191-202
- Molenaar, C.¹ Abdulle, A.² Gena, A.³ Tanke, H.J.⁴ Dirks, R.W.⁵

54
- 33645771977
- K. Tokunaga, T. Shibuya, Y. Ishihama, H. Tadakuma, M. Ide, M. Yoshida, T. Funatsu, Y. Ohshima, T. Tani, Genes Cells 2006, 11, 305-317.
- (2006) Genes Cells , vol.11 , pp. 305-317
- Tokunaga, K.¹ Shibuya, T.² Ishihama, Y.³ Tadakuma, H.⁴ Ide, M.⁵ Yoshida, M.⁶ Funatsu, T.⁷ Ohshima, Y.⁸ Tani, T.⁹

55
- 0037154838
- J. Enninga, D. E. Levy, G. Blobel, B. M. A. Fontoura, Science 2002, 295, 1523-1525.
- (2002) Science , vol.295 , pp. 1523-1525
- Enninga, J.¹ Levy, D.E.² Blobel, G.³ Fontoura, B.M.A.⁴

56
- 0033602460
- J. C. Politz, R. A. Tuft, T. Pederson, R. H. Singer, Curr. Biol. 1999, 9, 285-291.
- (1999) Curr. Biol. , vol.9 , pp. 285-291
- Politz, J.C.¹ Tuft, R.A.² Pederson, T.³ Singer, R.H.⁴

57
- 0026484980
- K. L. Taneja, L. M. Lifshitz, F. S. Fay, R. H. Singer, J. Cell Biol. 1992, 119, 1245-1260.
- (1992) J. Cell Biol. , vol.119 , pp. 1245-1260
- Taneja, K.L.¹ Lifshitz, L.M.² Fay, F.S.³ Singer, R.H.⁴

* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.