메뉴 건너뛰기




Volumn 31, Issue 2, 2010, Pages 208-217

Exciton primer-mediated SNP detection in SmartAmp2 reactions

Author keywords

Exciton primer; Multiplex reaction; SmartAmp2; SNP detection; Visual endpoint detection; VKORC1; Warfarin

Indexed keywords

DYE; ENZYME; EPIDERMAL GROWTH FACTOR RECEPTOR; EXCITON PRIMER; OLIGONUCLEOTIDE; UNCLASSIFIED DRUG; VITAMIN K EPOXIDE REDUCTASE COMPLEX SUBUNIT 1; WARFARIN;

EID: 75149139045     PISSN: 10597794     EISSN: 10981004     Source Type: Journal    
DOI: 10.1002/humu.21177     Document Type: Article
Times cited : (32)

References (39)
  • 1
    • 0343938892 scopus 로고    scopus 로고
    • Identification and characterization of immunoglobulin G in blood as a major inhibitor of diagnostic PCR
    • Al-Soud WA, Jonsson LJ, Radstrom P. 2000. Identification and characterization of immunoglobulin G in blood as a major inhibitor of diagnostic PCR. J Clin Microbiol 38:345-350.
    • (2000) J Clin Microbiol , vol.38 , pp. 345-350
    • Al-Soud, W.A.1    Jonsson, L.J.2    Radstrom, P.3
  • 2
    • 64149111606 scopus 로고    scopus 로고
    • Aomori T, Yamamoto K, Oguchi-Katayama A, Kawai Y, Ishidao T, Mitani Y, Kogo Y, Lezhava A, Fujita Y, Obayashi K, Nakamura K. 2009. Rapid single-nucleotide reductase (VKORC1) genes for the warfarin dose adjustment by the SMart-amplification process version 2. Clin Chem 55:804-812
    • Aomori T, Yamamoto K, Oguchi-Katayama A, Kawai Y, Ishidao T, Mitani Y, Kogo Y, Lezhava A, Fujita Y, Obayashi K, Nakamura K. 2009. Rapid single-nucleotide reductase (VKORC1) genes for the warfarin dose adjustment by the SMart-amplification process version 2. Clin Chem 55:804-812.
  • 5
    • 0031804089 scopus 로고    scopus 로고
    • A homogeneous, ligase-mediated DNA diagnostic test
    • Chen X, Livak KJ, Kwok PY. 1998. A homogeneous, ligase-mediated DNA diagnostic test. Genome Res 8:549-556.
    • (1998) Genome Res , vol.8 , pp. 549-556
    • Chen, X.1    Livak, K.J.2    Kwok, P.Y.3
  • 6
    • 0028924992 scopus 로고
    • Fluorescence resonance energy transfer
    • Clegg RM. 1995. Fluorescence resonance energy transfer. Curr Opin Biotechnol 6:103-110.
    • (1995) Curr Opin Biotechnol , vol.6 , pp. 103-110
    • Clegg, R.M.1
  • 7
    • 0035009916 scopus 로고    scopus 로고
    • One-tube real-time isothermal amplification assay to identify and distinguish human immunodeficiency virus type 1 subtypes A, B, and C and circulating recombinant forms AE and AG
    • de Baar MP, Timmermans EC, Bakker M, de Rooij E, van Gemen B, Goudsmit J. 2001. One-tube real-time isothermal amplification assay to identify and distinguish human immunodeficiency virus type 1 subtypes A, B, and C and circulating recombinant forms AE and AG. J Clin Microbiol 39:1895-1902.
    • (2001) J Clin Microbiol , vol.39 , pp. 1895-1902
    • de Baar, M.P.1    Timmermans, E.C.2    Bakker, M.3    de Rooij, E.4    van Gemen, B.5    Goudsmit, J.6
  • 8
    • 38049181030 scopus 로고    scopus 로고
    • Pharmacogenetics of warfarin: Regulatory, scientific, and clinical issues
    • Gage BF, Lesko LJ. 2008. Pharmacogenetics of warfarin: regulatory, scientific, and clinical issues. J Thromb Thrombolysis 25:45-51.
    • (2008) J Thromb Thrombolysis , vol.25 , pp. 45-51
    • Gage, B.F.1    Lesko, L.J.2
  • 9
    • 38949113780 scopus 로고    scopus 로고
    • Nucleic acid isothermal amplification technologies: A review
    • Gill P, Ghaemi A. 2008. Nucleic acid isothermal amplification technologies: a review. Nucleosides Nucleotides Nucleic Acids 27:224-243.
    • (2008) Nucleosides Nucleotides Nucleic Acids , vol.27 , pp. 224-243
    • Gill, P.1    Ghaemi, A.2
  • 10
    • 0031030886 scopus 로고    scopus 로고
    • Energy-transfer fluorescent reagents for DNA analyses
    • Glazer AN, Mathies RA. 1997. Energy-transfer fluorescent reagents for DNA analyses. Curr Opin Biotechnol 8:94-102.
    • (1997) Curr Opin Biotechnol , vol.8 , pp. 94-102
    • Glazer, A.N.1    Mathies, R.A.2
  • 12
    • 25144494269 scopus 로고    scopus 로고
    • Point-of-care molecular diagnostic systems - past, present and future
    • Holland CA, Kiechle FL. 2005. Point-of-care molecular diagnostic systems - past, present and future. Curr Opin Microbiol 8:504-509.
    • (2005) Curr Opin Microbiol , vol.8 , pp. 504-509
    • Holland, C.A.1    Kiechle, F.L.2
  • 14
    • 2442562584 scopus 로고    scopus 로고
    • Practical considerations in design of internal amplification controls for diagnostic PCR assays
    • Hoorfar J, Malorny B, Abdulmawjood A, Cook N, Wagner M, Fach P. 2004. Practical considerations in design of internal amplification controls for diagnostic PCR assays. J Clin Microbiol 42:1863-1868.
    • (2004) J Clin Microbiol , vol.42 , pp. 1863-1868
    • Hoorfar, J.1    Malorny, B.2    Abdulmawjood, A.3    Cook, N.4    Wagner, M.5    Fach, P.6
  • 16
    • 50249090083 scopus 로고    scopus 로고
    • Sequence dependence of fluorescence emission and quenching of doubly thiazole orange labeled DNA: Effective design of a hybridization-sensitive probe
    • Ikeda S, Kubota T, Kino K, Okamoto A. 2008. Sequence dependence of fluorescence emission and quenching of doubly thiazole orange labeled DNA: effective design of a hybridization-sensitive probe. Bioconjug Chem 19:1719-1725.
    • (2008) Bioconjug Chem , vol.19 , pp. 1719-1725
    • Ikeda, S.1    Kubota, T.2    Kino, K.3    Okamoto, A.4
  • 17
    • 70349932066 scopus 로고    scopus 로고
    • Exciton-controlled hybridization-sensitive fluorescent probes: Multicolor detection of nucleic acids
    • Ikeda S, Kubota T, Yuki M, Okamoto A. 2009. Exciton-controlled hybridization-sensitive fluorescent probes: multicolor detection of nucleic acids. Angew Chem Int Ed Engl 48:6480-6484.
    • (2009) Angew Chem Int Ed Engl , vol.48 , pp. 6480-6484
    • Ikeda, S.1    Kubota, T.2    Yuki, M.3    Okamoto, A.4
  • 18
    • 50249187299 scopus 로고    scopus 로고
    • Hybridization-sensitive on-off DNA probe: Application of the exciton coupling effect to effective fluorescence quenching
    • Ikeda S, Okamoto A. 2008. Hybridization-sensitive on-off DNA probe: application of the exciton coupling effect to effective fluorescence quenching. Chem Asian J 3:958-968.
    • (2008) Chem Asian , vol.J 3 , pp. 958-968
    • Ikeda, S.1    Okamoto, A.2
  • 20
    • 67651164928 scopus 로고    scopus 로고
    • Molecular beacons in biomedical detection and clinical diagnosis
    • Kim Y, Sohn D, Tan W. 2008. Molecular beacons in biomedical detection and clinical diagnosis. Int J Clin Exp Pathol 1:105-116.
    • (2008) Int J Clin Exp Pathol , vol.1 , pp. 105-116
    • Kim, Y.1    Sohn, D.2    Tan, W.3
  • 22
    • 73449131939 scopus 로고    scopus 로고
    • Detection of SNP by the isothermal smart amplification method
    • Lezhava A, Hayashizaki Y. 2009. Detection of SNP by the isothermal smart amplification method. Methods Mol Biol 578:437-451.
    • (2009) Methods Mol Biol , vol.578 , pp. 437-451
    • Lezhava, A.1    Hayashizaki, Y.2
  • 24
    • 44449177729 scopus 로고    scopus 로고
    • Interactive fluorophore and quencher pairs for labeling fluorescent nucleic acid hybridization probes
    • Marras SA. 2008. Interactive fluorophore and quencher pairs for labeling fluorescent nucleic acid hybridization probes. Mol Biotechnol 38:247-255.
    • (2008) Mol Biotechnol , vol.38 , pp. 247-255
    • Marras, S.A.1
  • 27
    • 2442610695 scopus 로고    scopus 로고
    • Real-time turbidimetry of LAMP reaction for quantifying template DNA
    • Mori Y, Kitao M, Tomita N, Notomi T. 2004. Real-time turbidimetry of LAMP reaction for quantifying template DNA. J Biochem Biophys Methods 59:145-157.
    • (2004) J Biochem Biophys Methods , vol.59 , pp. 145-157
    • Mori, Y.1    Kitao, M.2    Tomita, N.3    Notomi, T.4
  • 28
    • 36048970749 scopus 로고    scopus 로고
    • Homogeneous detection of nucleic acids using self-quenched polymerase chain reaction primers labeled with a single fluorophore (LUX primers)
    • Nazarenko I. 2006. Homogeneous detection of nucleic acids using self-quenched polymerase chain reaction primers labeled with a single fluorophore (LUX primers). Methods Mol Biol 335:95-114.
    • (2006) Methods Mol Biol , vol.335 , pp. 95-114
    • Nazarenko, I.1
  • 30
    • 0028911538 scopus 로고    scopus 로고
    • polymorphism detection of cytochrome P450 (CYP2C9) and vitamin K epoxide Schneeberger C, Speiser P, Kury F, Zeillinger R. 1995. Quantitative detection of reverse transcriptase-PCR products by means of a novel and sensitive DNA stain. PCR Methods Appl 4:234-238.
    • polymorphism detection of cytochrome P450 (CYP2C9) and vitamin K epoxide Schneeberger C, Speiser P, Kury F, Zeillinger R. 1995. Quantitative detection of reverse transcriptase-PCR products by means of a novel and sensitive DNA stain. PCR Methods Appl 4:234-238.
  • 33
  • 34
    • 34250882734 scopus 로고    scopus 로고
    • Faster, simpler, more-specific methods for improved molecular detection of Phytophthora ramorum in the field
    • Tomlinson JA, Barker I, Boonham N. 2007. Faster, simpler, more-specific methods for improved molecular detection of Phytophthora ramorum in the field. Appl Environ Microbiol 73:4040-4047.
    • (2007) Appl Environ Microbiol , vol.73 , pp. 4040-4047
    • Tomlinson, J.A.1    Barker, I.2    Boonham, N.3
  • 37
    • 51649084617 scopus 로고    scopus 로고
    • Regulatory polymorphism in vitamin K epoxide reductase complex subunit 1 (VKORC1) affects gene expression and warfarin dose requirement
    • Wang D, Chen H, Momary KM, Cavallari LH, Johnson JA, Sadee W. 2008. Regulatory polymorphism in vitamin K epoxide reductase complex subunit 1 (VKORC1) affects gene expression and warfarin dose requirement. Blood 112:1013-1021.
    • (2008) Blood , vol.112 , pp. 1013-1021
    • Wang, D.1    Chen, H.2    Momary, K.M.3    Cavallari, L.H.4    Johnson, J.A.5    Sadee, W.6
  • 38
    • 33746234772 scopus 로고    scopus 로고
    • Molecular Zipper: A fluorescent probe for real-time isothermal DNA amplification
    • Yi J, Zhang W, Zhang DY. 2006. Molecular Zipper: a fluorescent probe for real-time isothermal DNA amplification. Nucleic Acids Res 34:e81.
    • (2006) Nucleic Acids Res , vol.34
    • Yi, J.1    Zhang, W.2    Zhang, D.Y.3
  • 39
    • 3142708522 scopus 로고    scopus 로고
    • Investigations on DNA intercalation and surface binding by SYBR Green I, its structure determination and methodological implications
    • Zipper H, Brunner H, Bernhagen J, Vitzthum F. 2004. Investigations on DNA intercalation and surface binding by SYBR Green I, its structure determination and methodological implications. Nucleic Acids Res 32:e103.
    • (2004) Nucleic Acids Res , vol.32
    • Zipper, H.1    Brunner, H.2    Bernhagen, J.3    Vitzthum, F.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.