메뉴 건너뛰기




Volumn 22, Issue 8, 2011, Pages 1625-1630

Cy5-conjugated hybridization-sensitive fluorescent oligonucleotides for ratiometric analysis of nuclear poly(A)+ RNA

Author keywords

[No Author keywords available]

Indexed keywords

FLUORESCENCE; MAMMALS; OLIGONUCLEOTIDES; RNA;

EID: 80051779505     PISSN: 10431802     EISSN: 15204812     Source Type: Journal    
DOI: 10.1021/bc200184a     Document Type: Article
Times cited : (9)

References (21)
  • 1
    • 1842376906 scopus 로고    scopus 로고
    • The dynamics of a pre-mRNA splicing factor in living cells
    • DOI 10.1038/387523a0
    • Misteli, T., Cáceres, J. F., and Spector, D. L. (1997) The dynamics of a pre-mRNA splicing factor in living cells Nature 387, 523-527 (Pubitemid 27235473)
    • (1997) Nature , vol.387 , Issue.6632 , pp. 523-527
    • Misteli, T.1    Caceres, J.F.2    Spector, D.L.3
  • 2
    • 0041669439 scopus 로고    scopus 로고
    • Nuclear speckles: A model for nuclear organelles
    • DOI 10.1038/nrm1172
    • Lamond, A. I. and Spector, D. L. (2003) Nuclear speckles: a model for nuclear organelles Nat. Rev. Mol. Cell Biol. 4, 605-612 (Pubitemid 36934962)
    • (2003) Nature Reviews Molecular Cell Biology , vol.4 , Issue.8 , pp. 605-612
    • Lamond, A.I.1    Spector, D.L.2
  • 3
    • 33645771977 scopus 로고    scopus 로고
    • Nucleocytoplasmic transport of fluorescent mRNA in living mammalian cells: Nuclear mRNA export is coupled to ongoing gene transcription
    • Tokunaga, K., Shibuya, T., Ishihama, Y., Tadakuma, H., Ide, M., Yoshida, M., Funatsu, T., Ohshima, Y., and Tani, T. (2006) Nucleocytoplasmic transport of fluorescent mRNA in living mammalian cells: nuclear mRNA export is coupled to ongoing gene transcription Genes Cells 11, 305-317
    • (2006) Genes Cells , vol.11 , pp. 305-317
    • Tokunaga, K.1    Shibuya, T.2    Ishihama, Y.3    Tadakuma, H.4    Ide, M.5    Yoshida, M.6    Funatsu, T.7    Ohshima, Y.8    Tani, T.9
  • 4
    • 0037154838 scopus 로고    scopus 로고
    • Role of nucleoporin induction in releasing an mRNA nuclear export block
    • DOI 10.1126/science.1067861
    • Enninga, J., Levy, D. E., Blobel, G., and Fontoura, B. M. (2002) Role of nucleoporin induction in releasing an mRNA nuclear export block Science 295, 1523-1525 (Pubitemid 34174007)
    • (2002) Science , vol.295 , Issue.5559 , pp. 1523-1525
    • Enninga, J.1    Levy, D.E.2    Blobel, G.3    Fontoura, B.M.A.4
  • 5
    • 0033602460 scopus 로고    scopus 로고
    • Movement of nuclear poly(A) RNA throughout the interchromatin space in living cells
    • DOI 10.1016/S0960-9822(99)80136-5
    • Politz, J. C., Tuft, R. A., Pederson, T., and Singer, R. H. (1999) Movement of nuclear poly(A) RNA throughout the interchromatin space in living cells Curr. Biol. 9, 285-291 (Pubitemid 29181834)
    • (1999) Current Biology , vol.9 , Issue.6 , pp. 285-291
    • Politz, J.C.1    Tuft, R.A.2    Pederson, T.3    Singer, R.H.4
  • 6
    • 0026484980 scopus 로고
    • Poly(A) RNA codistribution with microfilaments: Evaluation by in situ hybridization and quantitative digital imaging microscopy
    • Taneja, K. L., Lifshitz, L. M., Fay, F. S., and Singer, R. H. (1992) Poly(A) RNA codistribution with microfilaments: evaluation by in situ hybridization and quantitative digital imaging microscopy J. Cell Biol. 119, 1245-1260
    • (1992) J. Cell Biol. , vol.119 , pp. 1245-1260
    • Taneja, K.L.1    Lifshitz, L.M.2    Fay, F.S.3    Singer, R.H.4
  • 7
    • 0029670262 scopus 로고    scopus 로고
    • Molecular beacons: Probes that fluoresce upon hybridization
    • Tyagi, S. and Kramer, F. R. (1996) Molecular beacons: Probes that fluoresce upon hybridization Nat. Biotechnol. 14, 303-308
    • (1996) Nat. Biotechnol. , vol.14 , pp. 303-308
    • Tyagi, S.1    Kramer, F.R.2
  • 8
    • 0037151617 scopus 로고    scopus 로고
    • Imaging of RNA in bacteria with self-ligating quenched probes
    • Sando, S. and Kool, E. T. (2002) Imaging of RNA in bacteria with self-ligating quenched probes J. Am. Chem. Soc. 124, 9686-9687
    • (2002) J. Am. Chem. Soc. , vol.124 , pp. 9686-9687
    • Sando, S.1    Kool, E.T.2
  • 9
    • 0037020361 scopus 로고    scopus 로고
    • Bispyrene-conjugated 2′-O-methyloligonucleotide as a highly specific RNA-recognition probe
    • DOI 10.1002/1521-3773(20021004)41:19<3648::AID-ANIE3648>3.0.CO;2-Y
    • Mahara, A., Iwase, R., Sakamoto, T., Yamana, K., Yamaoka, T., and Murakami, A. (2002) Bispyrene-conjugated 2′-O-methyloligonucleotide as a highly specific RNA-recognition probe Angew. Chem., Int. Ed. 41, 3648-3650 (Pubitemid 35190475)
    • (2002) Angewandte Chemie - International Edition , vol.41 , Issue.19 , pp. 3648-3650
    • Mahara, A.1    Iwase, R.2    Sakamoto, T.3    Yamana, K.4    Yamaoka, T.5    Murakami, A.6
  • 10
    • 50249187299 scopus 로고    scopus 로고
    • Hybridization-sensitive on-off DNA probe: Application of the exciton coupling effect to effective fluorescence quenching
    • Ikeda, S. and Okamoto, A. (2008) Hybridization-sensitive on-off DNA probe: Application of the exciton coupling effect to effective fluorescence quenching Chem. -Asian J. 3, 958-968
    • (2008) Chem. -Asian J. , vol.3 , pp. 958-968
    • Ikeda, S.1    Okamoto, A.2
  • 11
    • 50249090083 scopus 로고    scopus 로고
    • Sequence dependence of fluorescence emission and quenching of doubly thiazole orange-labeled DNA: Effective design of a hybridization-sensitive probe
    • Ikeda, S., Kubota, T., Kino, K., and Okamoto, A. (2008) Sequence dependence of fluorescence emission and quenching of doubly thiazole orange-labeled DNA: Effective design of a hybridization-sensitive probe Bioconjugate Chem. 19, 1719-1725
    • (2008) Bioconjugate Chem. , vol.19 , pp. 1719-1725
    • Ikeda, S.1    Kubota, T.2    Kino, K.3    Okamoto, A.4
  • 12
    • 6344254582 scopus 로고    scopus 로고
    • Exciton interactions in cyanine dye-hyaluronic acid (HA) complex: Reversible and biphasic molecular switching of chromophores induced by random coil-to-double-helix phase transition of HA
    • DOI 10.1039/b408032g
    • Sagawa, T., Tobata, H., and Ihara, H. (2004) Exciton interactions in cyanine dye-hyaluronic acid (HA) complex: reversible and biphasic molecular switching of chromophores induced by random coil-to-double-helix phase transition of HA Chem. Commun. 2090-2091 (Pubitemid 39389526)
    • (2004) Chemical Communications , Issue.18 , pp. 2090-2091
    • Sagawa, T.1    Tobata, H.2    Ihara, H.3
  • 13
    • 0011116076 scopus 로고
    • The dimeric state of cyanine dyes
    • West, W. and Sandra, P. (1965) The dimeric state of cyanine dyes J. Phys. Chem. 69, 1894-1903
    • (1965) J. Phys. Chem. , vol.69 , pp. 1894-1903
    • West, W.1    Sandra, P.2
  • 14
    • 0001387224 scopus 로고    scopus 로고
    • Photophysics of cyanine dyes: Subnanosecond relaxation dynamics in monomers, dimers, and H- and J-aggregates in solution
    • Khairutdinov, R. F. and Serpone, N. (1997) Photophysics of cyanine dyes: Subnanosecond relaxation dynamics in monomers, dimers, and H- and J-aggregates in solution J. Phys. Chem. B 101, 2602-2610 (Pubitemid 127581055)
    • (1997) Journal of Physical Chemistry B , vol.101 , Issue.14 , pp. 2602-2610
    • Khairutdinov, R.F.1    Serpone, N.2
  • 15
    • 58349122886 scopus 로고    scopus 로고
    • Doubly thiazole orange-labeled DNA for live cell RNA imaging
    • Kubota, T., Ikeda, S., and Okamoto, A. (2009) Doubly thiazole orange-labeled DNA for live cell RNA imaging Bull. Chem. Soc. Jpn. 82, 110-117
    • (2009) Bull. Chem. Soc. Jpn. , vol.82 , pp. 110-117
    • Kubota, T.1    Ikeda, S.2    Okamoto, A.3
  • 16
    • 77958552723 scopus 로고    scopus 로고
    • Sets of RNA repeated tags and hybridization-sensitive fluorescent probes for distinct images of RNA in a living cell
    • Kubota, T., Ikeda, S., Yanagisawa, H., Yuki, M., and Okamoto, A. (2010) Sets of RNA repeated tags and hybridization-sensitive fluorescent probes for distinct images of RNA in a living cell PLoS ONE 5, e13003
    • (2010) PLoS ONE , vol.5 , pp. 13003
    • Kubota, T.1    Ikeda, S.2    Yanagisawa, H.3    Yuki, M.4    Okamoto, A.5
  • 17
    • 0023651145 scopus 로고
    • Synthesis and hybridization studies on two complementary nona(2′-O-methyl)ribonucleotides
    • Inoue, H., Hayase, Y., Imura, A., Iwai, S., Miura, K., and Ohtsuka, E. (1987) Synthesis and hybridization studies on two complementary nona(2′-O-methyl)ribonucleotides Nucleic Acids Res. 15, 6131-6148
    • (1987) Nucleic Acids Res. , vol.15 , pp. 6131-6148
    • Inoue, H.1    Hayase, Y.2    Imura, A.3    Iwai, S.4    Miura, K.5    Ohtsuka, E.6
  • 18
    • 0032077477 scopus 로고    scopus 로고
    • Advantages of 2'-O-methyl oligoribonucleotide probes for detecting RNA targets
    • DOI 10.1093/nar/26.9.2224
    • Majlessi, M., Nelon, N. C., and Becker, M. M. (1998) Advantages of 2′-O-methyl oligoribonucleotide probes for detecting RNA targets Nucleic Acids Res. 26, 2224-2229 (Pubitemid 28291770)
    • (1998) Nucleic Acids Research , vol.26 , Issue.9 , pp. 2224-2229
    • Majlessi, M.1    Nelson, N.C.2    Becker, M.M.3
  • 19
    • 67649211935 scopus 로고    scopus 로고
    • Hybridization-sensitive fluorescent probe for long-term monitoring of intracellular RNA
    • Kubota, T., Ikeda, S., Yanagisawa, H., Yuki, M., and Okamoto, A. (2009) Hybridization-sensitive fluorescent probe for long-term monitoring of intracellular RNA Bioconjugate Chem. 20, 1256-1261
    • (2009) Bioconjugate Chem. , vol.20 , pp. 1256-1261
    • Kubota, T.1    Ikeda, S.2    Yanagisawa, H.3    Yuki, M.4    Okamoto, A.5
  • 20
    • 33751403421 scopus 로고    scopus 로고
    • Heterochromatin diversity and its co-localization with 5S and 45S rDNA sites in chromosomes of four Maxillaria species (Orchidaceae)
    • Cabral, J. S., Felix, L. P., and Guerra, M. (2006) Heterochromatin diversity and its co-localization with 5S and 45S rRNA sites in chromosomes of four Maxillaria species (Orchidaceae) Genet. Mol. Biol. 29, 659-664 (Pubitemid 44816900)
    • (2006) Genetics and Molecular Biology , vol.29 , Issue.4 , pp. 659-664
    • Cabral, J.S.1    Felix, L.P.2    Guerra, M.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.