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Volumn 22, Issue 10, 2011, Pages 1784-1793

ETD in a traveling wave ion guide at tuned Z-spray ion source conditions allows for site-specific hydrogen/deuterium exchange measurements

Author keywords

Electron transfer dissociation; Hydrogen deuterium exchange; Protein conformation; Supplemental activation; Traveling wave ion guide

Indexed keywords

ELECTRON TRANSFER DISSOCIATION; HYDROGEN/DEUTERIUM EXCHANGE; PROTEIN CONFORMATION; SUPPLEMENTAL ACTIVATION; TRAVELING WAVE;

EID: 80855156910     PISSN: 10440305     EISSN: 18791123     Source Type: Journal    
DOI: 10.1007/s13361-011-0196-7     Document Type: Article
Times cited : (70)

References (31)
  • 1
    • 79951887389 scopus 로고    scopus 로고
    • Hydrogen exchange mass spectrometry for studying protein structure and dynamics
    • Konermann, L., Pan, J., Liu, Y. H.: Hydrogen exchange mass spectrometry for studying protein structure and dynamics. Chem. Soc. Rev. 40, 1224-1234 (2010)
    • (2010) Chem. Soc. Rev. , vol.40 , pp. 1224-1234
    • Konermann, L.1    Pan, J.2    Liu, Y.H.3
  • 3
    • 33644761306 scopus 로고    scopus 로고
    • Hydrogen exchange mass spectrometry for the analysis of protein dynamics
    • Wales, T. E., Engen, J. R.: Hydrogen exchange mass spectrometry for the analysis of protein dynamics. Mass Spectrom. Rev. 25, 158-170 (2006)
    • (2006) Mass Spectrom. Rev. , vol.25 , pp. 158-170
    • Wales, T.E.1    Engen, J.R.2
  • 5
    • 0031912073 scopus 로고    scopus 로고
    • Determinants of protein hydrogen exchange studied in equine cytochrome c
    • Milne, J. S., Mayne, L., Roder, H., Wand, A. J., Englander, S. W.: Determinants of protein hydrogen exchange studied in equine cytochrome c. Protein Sci. 7, 739-745 (1998) (Pubitemid 28130896)
    • (1998) Protein Science , vol.7 , Issue.3 , pp. 739-745
    • Milne, J.S.1    Mayne, L.2    Roder, H.3    Wand, A.J.4    Englander, S.W.5
  • 7
    • 0000944563 scopus 로고    scopus 로고
    • Electron capture dissociation of multiply charged protein cations. A nonergodic process
    • Zubarev, R. A., Kelleher, N. L., McLafferty, F. W.: Electron capture dissociation of multiply charged protein cations. A nonergodic process. J. Am. Chem. Soc. 120, 3265-3266 (1998)
    • (1998) J. Am. Chem. Soc. , vol.120 , pp. 3265-3266
    • Zubarev, R.A.1    Kelleher, N.L.2    McLafferty, F.W.3
  • 8
    • 38649092998 scopus 로고    scopus 로고
    • Electron capture dissociation proceeds with a low degree of intramolecular migration of peptide amide hydrogens
    • DOI 10.1021/ja076448i
    • Rand, K. D., Adams, C. M., Zubarev, R. A., Jorgensen, T. J. D.: Electron capture dissociation proceeds with a low degree of intramolecular migration of peptide amide hydrogens. J. Am. Chem. Soc. 130, 1341-1349 (2008) (Pubitemid 351171014)
    • (2008) Journal of the American Chemical Society , vol.130 , Issue.4 , pp. 1341-1349
    • Rand, K.D.1    Adams, C.M.2    Zubarev, R.A.3    Jorgensen, T.J.D.4
  • 9
    • 78649703780 scopus 로고    scopus 로고
    • Loss of ammonia during electron-transfer dissociation of deuterated peptides as an inherent gauge of gas-phase hydrogen scrambling
    • Rand, K. D., Zehl, M., Jensen, O. N., Jorgensen, T. J.: Loss of ammonia during electron-transfer dissociation of deuterated peptides as an inherent gauge of gas-phase hydrogen scrambling. Anal. Chem. 82, 9755-9762 (2010)
    • (2010) Anal. Chem. , vol.82 , pp. 9755-9762
    • Rand, K.D.1    Zehl, M.2    Jensen, O.N.3    Jorgensen, T.J.4
  • 10
    • 67650756766 scopus 로고    scopus 로고
    • Protein hydrogen exchange measured at single-residue resolution by electron transfer dissociation mass spectrometry
    • Rand, K. D., Zehl, M., Jensen, O. N., Jørgensen, T. J. D.: Protein hydrogen exchange measured at single-residue resolution by electron transfer dissociation mass spectrometry. Anal. Chem. 81, 5577-5584 (2009)
    • (2009) Anal. Chem. , vol.81 , pp. 5577-5584
    • Rand, K.D.1    Zehl, M.2    Jensen, O.N.3    Jørgensen, T.J.D.4
  • 11
    • 67749127567 scopus 로고    scopus 로고
    • Electron transfer dissociation facilitates the measurement of deuterium incorporation into selectively labeled peptides with single residue resolution
    • Zehl, M., Rand, K. D., Jensen, O. N., Jørgensen, T. J. D.: Electron transfer dissociation facilitates the measurement of deuterium incorporation into selectively labeled peptides with single residue resolution. J. Am. Chem. Soc. 130, 17453-17459 (2008)
    • (2008) J. Am. Chem. Soc. , vol.130 , pp. 17453-17459
    • Zehl, M.1    Rand, K.D.2    Jensen, O.N.3    Jørgensen, T.J.D.4
  • 12
    • 67650763014 scopus 로고    scopus 로고
    • Protein conformations can be probed in top-down HDX MS experiments utilizing electron transfer dissociation of protein ions without hydrogen scrambling
    • Abzalimov, R. R., Kaplan, D. A., Easterling, M. L., Kaltashov, I. A.: Protein conformations can be probed in top-down HDX MS experiments utilizing electron transfer dissociation of protein ions without hydrogen scrambling. J. Am. Soc. Mass. Spectrom. 20, 1514-1517 (2009)
    • (2009) J. Am. Soc. Mass. Spectrom. , vol.20 , pp. 1514-1517
    • Abzalimov, R.R.1    Kaplan, D.A.2    Easterling, M.L.3    Kaltashov, I.A.4
  • 13
    • 51349168541 scopus 로고    scopus 로고
    • Electron capture dissociation of electrosprayed protein ions for spatially resolved hydrogen exchange measurements
    • Pan, J., Han, J., Borchers, C. H., Konermann, L.: Electron capture dissociation of electrosprayed protein ions for spatially resolved hydrogen exchange measurements. J. Am. Chem. Soc. 130, 11574-11575 (2008)
    • (2008) J. Am. Chem. Soc. , vol.130 , pp. 11574-11575
    • Pan, J.1    Han, J.2    Borchers, C.H.3    Konermann, L.4
  • 14
    • 69849083391 scopus 로고    scopus 로고
    • Hydrogen/deuterium exchange mass spectrometry with top-down electron capture dissociation for characterizing structural transitions of a 17 kDa protein
    • Pan, J., Han, J., Borchers, C. H., Konermann, L: Hydrogen/deuterium exchange mass spectrometry with top-down electron capture dissociation for characterizing structural transitions of a 17 kDa protein. J. Am. Chem. Soc. 131, 12801-12808 (2009)
    • (2009) J. Am. Chem. Soc. , vol.131 , pp. 12801-12808
    • Pan, J.1    Han, J.2    Borchers, C.H.3    Konermann, L.4
  • 15
    • 70349632883 scopus 로고    scopus 로고
    • H/D exchange and mass sspectrometry in the studies of protein conformation and dynamics: Is there a need for a top-down approach?
    • Kaltashov, I. A., Bobst, C. E., Abzalimov, R. R.: H/D exchange and mass sspectrometry in the studies of protein conformation and dynamics: Is there a need for a top-down approach? Anal. Chem. 81, 7892-7899 (2009)
    • (2009) Anal. Chem. , vol.81 , pp. 7892-7899
    • Kaltashov, I.A.1    Bobst, C.E.2    Abzalimov, R.R.3
  • 16
    • 84988143834 scopus 로고
    • Proton mobility within electrosprayed peptide ions
    • Johnson, R. S., Krylov, D., Walsh, K. A.: Proton mobility within electrosprayed peptide ions. J. Mass Spectrom. 30, 386-387 (1995)
    • (1995) J. Mass Spectrom. , vol.30 , pp. 386-387
    • Johnson, R.S.1    Krylov, D.2    Walsh, K.A.3
  • 17
    • 84987044301 scopus 로고
    • Hydrogen transferreactions in the formation of Y + 2 sequence ions from protonated peptides
    • Mueller, D. R., Eckersley, M., Richter, W. J.: Hydrogen transferreactions in the formation of Y + 2 sequence ions from protonated peptides. Org. Mass Spectrom. 23, 217-222 (1988)
    • (1988) Org. Mass Spectrom. , vol.23 , pp. 217-222
    • Mueller, D.R.1    Eckersley, M.2    Richter, W.J.3
  • 18
    • 14744272834 scopus 로고    scopus 로고
    • Intramolecular migration of amide hydrogens in protonated peptides upon collisional activation
    • DOI 10.1021/ja043789c
    • Jorgensen, T. J. D., Gardsvoll, H., Ploug, M., Roepstorff, P.: Intramolecular migration of amide hydrogens in protonated peptides upon collisional activation. J. Am. Chem. Soc. 127, 2785-2793 (2005) (Pubitemid 40327841)
    • (2005) Journal of the American Chemical Society , vol.127 , Issue.8 , pp. 2785-2793
    • Jorgensen, T.J.D.1    Gardsvoll, H.2    Ploug, M.3    Roepstorff, P.4
  • 19
    • 36448938198 scopus 로고    scopus 로고
    • 2H) scrambling upon gas-phase fragmentation
    • DOI 10.1021/ac0710782
    • Rand, K. D., Jorgensen, T. J.: Development of a peptide probe for the occurrence of hydrogen ((1) H/(2) H) scrambling upon gas-phase fragmentation. Anal. Chem. 79, 8686-8693 (2007) (Pubitemid 350171380)
    • (2007) Analytical Chemistry , vol.79 , Issue.22 , pp. 8686-8693
    • Rand, K.D.1    Jorgensen, T.J.D.2
  • 20
    • 72449155492 scopus 로고    scopus 로고
    • Gas-phase hydrogen/deuterium exchange in a traveling wave ion guide for the examination of protein conformations
    • Rand, K. D., Pringle, S. D., Murphy, J. P., Fadgen, K. E., Brown, J., Engen, J. R.: Gas-phase hydrogen/deuterium exchange in a traveling wave ion guide for the examination of protein conformations. Anal. Chem. 81, 10019-10028 (2009)
    • (2009) Anal. Chem. , vol.81 , pp. 10019-10028
    • Rand, K.D.1    Pringle, S.D.2    Murphy, J.P.3    Fadgen, K.E.4    Brown, J.5    Engen, J.R.6
  • 21
    • 77950863538 scopus 로고    scopus 로고
    • Conformational dynamics of the Escherichia coli DNA polymerase manager proteins UmuD and UmuD'
    • Fang, J., Rand, K. D., Silva, M. C., Wales, T. E., Engen, J. R., Beuning, P. J.: Conformational dynamics of the Escherichia coli DNA polymerase manager proteins UmuD and UmuD'. J. Mol. Biol. 398, 40-53 (2010)
    • (2010) J. Mol. Biol. , vol.398 , pp. 40-53
    • Fang, J.1    Rand, K.D.2    Silva, M.C.3    Wales, T.E.4    Engen, J.R.5    Beuning, P.J.6
  • 22
    • 70649091226 scopus 로고    scopus 로고
    • Online hydrogen/deuterium exchange performed in the ion mobility cell of a hybrid mass spectrometer
    • Nagy, K., Redeuil, K., Rezzi, S.: Online hydrogen/deuterium exchange performed in the ion mobility cell of a hybrid mass spectrometer. Anal. Chem. 81, 9365-9371 (2009)
    • (2009) Anal. Chem. , vol.81 , pp. 9365-9371
    • Nagy, K.1    Redeuil, K.2    Rezzi, S.3
  • 23
    • 77954794218 scopus 로고    scopus 로고
    • Identifying drug metallation sites on peptides using electron transfer dissociation (ETD), collision induced dissociation (CID), and ion mobility-mass spectrometry (IM-MS)
    • Williams, J. P., Brown, J. M., Campuzano, I., Sadler, P. J.: Identifying drug metallation sites on peptides using Electron Transfer Dissociation (ETD), Collision Induced Dissociation (CID), and Ion Mobility-Mass Spectrometry (IM-MS). Chem. Commun. 46, 5458-5460 (2010)
    • (2010) Chem. Commun. , vol.46 , pp. 5458-5460
    • Williams, J.P.1    Brown, J.M.2    Campuzano, I.3    Sadler, P.J.4
  • 24
    • 56149087277 scopus 로고    scopus 로고
    • Native mass spectrometry: A bridge between interactomics and structural biology
    • Heck, A. J. R.: Native mass spectrometry: A bridge between interactomics and structural biology. Nat. Methods 5, 927-933 (2008)
    • (2008) Nat. Methods , vol.5 , pp. 927-933
    • Heck, A.J.R.1
  • 26
    • 78649748259 scopus 로고    scopus 로고
    • Ion mobility mass spectrometry of two tetrameric membrane protein complexes reveals compact structures and differences in stability and packing
    • Wang, S. C., Politis, A., Di Bartolo, N., Bavro, V. N., Tucker, S. J., Booth, P. J., Barrera, N. P., Robinson, C. V.: Ion mobility mass spectrometry of two tetrameric membrane protein complexes reveals compact structures and differences in stability and packing. J. Am. Chem. Soc. 132, 15468-15470 (2010)
    • (2010) J. Am. Chem. Soc. , vol.132 , pp. 15468-15470
    • Wang, S.C.1    Politis, A.2    Di Bartolo, N.3    Bavro, V.N.4    Tucker, S.J.5    Booth, P.J.6    Barrera, N.P.7    Robinson, C.V.8
  • 27
    • 34548215681 scopus 로고    scopus 로고
    • Protein complexes in the gas phase: Technology for structural genomics and proteomics
    • Benesch, J. L. P., Ruotolo, B. T., Simmons, D. A., Robinson, C. V.: Protein complexes in the gas phase: Technology for structural genomics and proteomics. Chem. Rev. 107, 3544 (2007)
    • (2007) Chem. Rev. , vol.107 , pp. 3544
    • Benesch, J.L.P.1    Ruotolo, B.T.2    Simmons, D.A.3    Robinson, C.V.4
  • 29
    • 24644436322 scopus 로고    scopus 로고
    • Electron-transfer ion/ion reactions of doubly protonated peptides: Effect of elevated bath gas temperature
    • DOI 10.1021/ac050666h
    • Pitteri, S. J., Chrisman, P. A., McLuckey, S. A.: Electron-transfer ion/ion reactions of doubly protonated peptides: Effect of elevated bath gas temperature. Anal. Chem. 77, 5662-5669 (2005) (Pubitemid 41266062)
    • (2005) Analytical Chemistry , vol.77 , Issue.17 , pp. 5662-5669
    • Pitteri, S.J.1    Chrisman, P.A.2    McLuckey, S.A.3
  • 30
    • 33846269339 scopus 로고    scopus 로고
    • Supplemental activation method for high-efficiency electron-transfer dissociation of doubly protonated peptide precursors
    • DOI 10.1021/ac061457f
    • Swaney, D. L., McAlister, G. C., Wirtala, M., Schwartz, J. C., Syka, J. E., Coon, J. J.: Supplemental activation method for high-efficiency electrontransfer dissociation of doubly protonated peptide precursors. Anal. Chem. 79, 477-485 (2007) (Pubitemid 46110632)
    • (2007) Analytical Chemistry , vol.79 , Issue.2 , pp. 477-485
    • Swaney, D.L.1    McAlister, G.C.2    Wirtala, M.3    Schwartz, J.C.4    Syka, J.E.P.5    Coon, J.J.6


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