Gas-phase hydrogen/deuterium exchange in a traveling wave ion guide for the examination of protein conformations

Analytical Chemistry

Volumn 81, Issue 24, 2009, Pages 10019-10028

  Rand, Kasper D ^a   Pringle, Steven D ^b   Murphy III, James P ^c   Fadgen, Keith E ^c   Brown, Jeff ^b   Engen, John R ^a  

^a NORTHEASTERN UNIVERSITY   (United States)

^b MICROMASS UK LTD   (United Kingdom)

^c WATERS CORPORATION   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

APOMYOGLOBIN; CYTOCHROME C; DEUTERIUM LABELING; GASPHASE; GLOBULAR PROTEINS; HIGHLY SENSITIVE; HYDROGEN/DEUTERIUM EXCHANGE; ION GUIDE; ION MOBILITY CELLS; ION MOBILITY SPECTROMETRY; MODEL PEPTIDES; PROTEIN ASSEMBLY; PROTEIN CONFORMATION; PROTEIN IONS; SOLUTION-PHASE CONFORMATIONS; TIME OF FLIGHT; TIME-SCALES; TRAVELING WAVE; UBIQUITIN;

AMINES; CONFORMATIONS; DEUTERIUM; ELECTROSPRAY IONIZATION; GASES; IONIZATION OF GASES; IONS; LABELING; MASS SPECTROMETRY; PEPTIDES;

ION EXCHANGE;

APOMYOGLOBIN; CYTOCHROME C; DEUTERIUM; HYDROGEN; ION; LYSOZYME; UBIQUITIN;

ARTICLE; CONTROLLED STUDY; DEUTERIUM HYDROGEN EXCHANGE; GAS; ION CURRENT; ION MOBILITY SPECTROMETRY; MASS SPECTROMETRY; PROTEIN CONFORMATION; TIME OF FLIGHT MASS SPECTROMETRY;

ANIMALS; CATTLE; CHICKENS; CYTOCHROMES C; DEUTERIUM; DEUTERIUM EXCHANGE MEASUREMENT; GASES; HYDROGEN; MURAMIDASE; MYOGLOBIN; PEPTIDES; PROTEIN CONFORMATION; SPECTROMETRY, MASS, ELECTROSPRAY IONIZATION; UBIQUITIN;

EID: 72449155492     PISSN: 00032700     EISSN: None     Source Type: Journal    
DOI: 10.1021/ac901897x     Document Type: Article

References (54)

1. Benesch, J. L.; Robinson, C. V. Curr. Opin. Struct. Biol. 2006, 16, 245-251.
2. Loo, A. J. J. Mass Spectrom. 1995, 30, 180-183.
3. Loo, J. A. Mass Spectrom. Rev. 1997, 16, 1-23.
4. Sobott, F.; McCammon, M. G.; Hernandez, H.; Robinson, C. V. Philos. Trans. R. Soc. London, Ser. A 2005, 363, 379-389.
5. Jarrold, M. F. Annu. Rev. Phys. Chem. 2000, 51, 179-207.
6. Badman, E. R.; Hoaglund-Hyzer, C. S.; Clemmer, D. E. Anal. Chem. 2001, 73, 6000-6007.
7. Badman, E. R.; Myung, S.; Clemmer, D. E. J. Am. Soc. Mass Spectrom. 2005, 16, 1493-1497.
8. Breuker, K.; McLafferty, F. W. Proc. Natl. Acad. Sci. U.S.A. 2008, 105, 18145-18152.
9. Breuker, K.; Oh, H. B.; Horn, D. M.; Cerda, B. A.; McLafferty, F. W. J. Am. Chem. Soc. 2002, 124, 6407-6420.
10. Steinberg, M. Z.; Elber, R.; McLafferty, F. W.; Gerber, R. B.; Breuker, K. ChemBioChem 2008, 9, 2417-2423.
11. Bohrer, B. C.; Mererbloom, S. I.; Koeniger, S. L.; Hilderbrand, A. E.; Clemmer, D. E. Annu. Rev. Anal. Chem. 2008, 1, 293-327.
12. Gross, D. S.; Schnier, P. D.; Rodriguez-Cruz, S. E.; Fagerquist, C. K.; Williams, E. R. Proc. Natl. Acad. Sci. U.S.A 1996, 93, 3143-3148.
13. Loo, R. R. O.; Winger, B. E.; Smith, R. D. J. Am. Soc. Mass Spectrom. 1994, 5, 1064-1071.
14. Williams, E. R. J. Mass Spectrom. 1996, 31, 831-842.
15. Suckau, D.; Shi, Y.; Beu, S. C.; Senko, M. W.; Quinn, J. P.; Wampler, F. M., III; McLafferty, F. W. Proc. Natl. Acad. Sci. U.S.A. 1993, 90, 790-793.
16. Winger, B. E.; Light-Wahl, K. J.; Rockwood, A. L.; Smith, R. D. J. Am. Chem. Soc. 2002, 114, 5897.
17. Pringle, S. D.; Giles, K.; Wildgoose, J. L.; Williams, J. P.; Slade, S. E.; Thalassinos, K.; Bateman, R. H.; Bowers, M. T.; Scrivens, J. H. Int. J. Mass Spectrom. 2007, 261, 1-12.
18. Freitas, M. A.; Hendrickson, C. L.; Emmett, M. R.; Marshall, A. G. Int. J. Mass Spectrom. 1999, 187, 565-575.
19. McLafferty, F. W.; Guan, Z.; Haupts, U.; Wood, T. D.; Kelleher, N. L. J. Am. Chem. Soc. 1998, 120, 4732-4740.
20. Robinson, E. W.; Williams, E. R. J. Am. Soc. Mass Spectrom. 2005, 16, 1427-1437.
21. Wales, T. E.; Engen, J. R. Mass Spectrom. Rev. 2006, 25, 158-170.
22. Yan, X.; Maier, C. S. In Mass Spectrometry of Proteins and Peptides; Pasa- Tolic, L., Lipton, Mary S., Eds.; Humana Press: New York, 2009; pp 255-271.
23. Rand, K. D.; Adams, C. M.; Zubarev, R. A.; Jorgensen, T. J. D. J. Am. Chem. Soc. 2008, 130, 1341-1349.
24. Zehl, M.; Rand, K. D.; Jensen, O. N.; Jørgensen, T. J. D. J. Am. Chem. Soc. 2008, 130, 17453-17459.
25. Pan, J.; Han, J.; Borchers, C. H.; Konermann, L. J. Am. Chem. Soc. 2008, 130, 11574-11575.
26. Pan, J.; Han, J.; Borchers, C. H.; Konermann, L. J. Am. Chem. Soc. 2009, 131, 12801-12808.
27. Rand, K. D.; Zehl, M.; Jensen, O. N.; Jørgensen, T. J. D. Anal. Chem. 2009, 81, 5577-5584.
28. Heck, A. J. R. Nat. Methods 2008, 5, 927-933.
29. Rand, K. D.; Pringle, S. D.; Murphy, J. P., III; Fadgen, K. E.; Brown, J.; Engen, J. R. Proceedings of the 57th Conference on Mass Spectrometry and Allied Topics, May 31-June 4, 2009; WPR 421.
30. Giles, K.; Pringle, S. D.; Worthington, K. R.; Little, D.; Wildgoose, J. L.; Bateman, R. H. Rapid Commun. Mass Spectrom. 2004, 18, 2401-2414.
31. Hofstadler, S. A.; Kristin, A. S.-L.; Richard, H. G. J. Mass Spectrom. 2000, 35, 62-70.
32. Mo, J.; Hakansson, K. Anal. Chem. 2007, 79, 7893-7898.
33. Sannes-Lowery, K.; Griffey, R. H.; Kruppa, G. H.; Speir, J. P.; Hofstadler, S. A. Rapid Commun. Mass Spectrom. 1998, 12, 1957-1961.
34. Hofstadler, S. A.; Kristin, A. S.-L.; Richard, H. G. Rapid Commun. Mass Spectrom. 1999, 13, 1971-1979.
35. Witt, M.; Fuchser, J.; Baykut, G. J. Am. Soc. Mass Spectrom. 2002, 13, 308-317.
36. Cheng, X.; Fenselau, C. Int. J. Mass Spectrom. Ion Processes 1992, 122, 109-119.
37. Campbell, S.; Rodgers, M. T.; Marzluff, E. M.; Beauchamp, J. L. J. Am. Chem. Soc. 1994, 116, 9765-9766.
38. Lifshitz, C. Int. J. Mass Spectrom. 2004, 234, 63-70.
39. Ranasinghe, A.; Cooks, G. R.; Sethi, K. S. K. Org. Mass Spectrom. 1992, 27, 77-88.
40. Ausloos, P.; Lias, S. G. J. Am. Chem. Soc. 1981, 103, 3641-3647.
41. Valentine, S. J.; Clemmer, D. E. J. Am. Chem. Soc. 1997, 119, 3558.
42. Myung, S.; Badman, E. R.; Lee, Y. J.; Clemmer, D. E. J. Phys. Chem. A 2002, 106, 9976-9982.
43. Valentine, S. J.; Counterman, A. E.; Clemmer, D. E. J. Am. Soc. Mass Spectrom. 1997, 8, 954-961.
44. Clemmer, D. E.; Hudgins, R. R.; Jarrold, M. F. J. Am. Chem. Soc. 1995, 117, 10141-10142.
45. Wright, P. J.; Zhang, J.; Douglas, D. J. J. Am. Soc. Mass Spectrom. 2008, 19, 1906-1913.
46. McLafferty, F. W.; Guan, Z. Q.; Haupts, U.; Wood, T. D.; Kelleher, N. L. J. Am. Chem. Soc. 1998, 120, 4732-4740.
47. Geller, O.; Lifshitz, C. Int. J. Mass Spectrom. 2004, 233, 125-129.
48. Reuben, B. G.; Ritov, Y.; Geller, O.; McFarland, M. A.; Marshall, A. G.; Lifshitz, C. Chem. Phys. Lett. 2003, 380, 88-94.
49. Geller, O.; Lifshitz, C. J. Phys. Chem. A 2005, 109, 2217-2222.
50. Campbell, S.; Rodgers, M. T.; Marzluff, E. M.; Beauchamp, J. L. J. Am. Chem. Soc. 1995, 117, 12840-12854.
51. Squires, R. R.; Bierbaum, V. M.; Grabowski, J. J.; DePuy, C. H. J. Am. Chem. Soc. 1983, 105, 5185-5192.
52. Sullivan, P. A.; Axelsson, J.; Altmann, S.; Quist, A. P.; Sunqvist, B. U. R.; Reimann, C. T. J. Am. Soc. Mass Spectrom. 1996, 7, 329-341.
53. Reimann, C. T.; Sullivan, P. A.; Axelsson, J.; Quist, A. P.; Altmann, S.; Roepstorff, P.; Velazquez, I.; Tapia, O. J. Am. Chem. Soc. 1998, 120, 7608-7616.
54. Hemling, M. E.; Conboy, J. J.; Bean, M. F.; Mentzer, M.; Carr, S. A. J. Am. Soc. Mass Spectrom. 1994, 5, 434-442.