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Volumn 6, Issue 9, 2011, Pages

Identification and functional clustering of genes regulating muscle protein degradation from amongst the known C. elegans muscle mutants

Author keywords

[No Author keywords available]

Indexed keywords

CALCIUM; GROWTH FACTOR; MUSCLE PROTEIN; PROTEINASE;

EID: 80053216685     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0024686     Document Type: Article
Times cited : (26)

References (42)
  • 1
    • 23944501319 scopus 로고    scopus 로고
    • Signal-transduction networks and the regulation of muscle protein degradation
    • Szewczyk NJ, Jacobson LA, (2005) Signal-transduction networks and the regulation of muscle protein degradation. Int J Biochem Cell Biol 37: 1997-2011.
    • (2005) Int J Biochem Cell Biol , vol.37 , pp. 1997-2011
    • Szewczyk, N.J.1    Jacobson, L.A.2
  • 2
  • 3
    • 78149452881 scopus 로고    scopus 로고
    • Protein homeostasis and the phenotypic manifestation of genetic diversity: principles and mechanisms
    • Jarosz DF, Taipale M, Lindquist S, (2010) Protein homeostasis and the phenotypic manifestation of genetic diversity: principles and mechanisms. Annu Rev Genet 44: 189-216.
    • (2010) Annu Rev Genet , vol.44 , pp. 189-216
    • Jarosz, D.F.1    Taipale, M.2    Lindquist, S.3
  • 4
    • 79951987952 scopus 로고    scopus 로고
    • Molecular mechanisms and treatment options for muscle wasting diseases
    • Ruegg MA, Glass DJ, (2011) Molecular mechanisms and treatment options for muscle wasting diseases. Annu Rev Pharmacol Toxicol 51: 373-395.
    • (2011) Annu Rev Pharmacol Toxicol , vol.51 , pp. 373-395
    • Ruegg, M.A.1    Glass, D.J.2
  • 5
    • 14644404350 scopus 로고    scopus 로고
    • Molecular mechanisms involved in muscle wasting in cancer and ageing: cachexia versus sarcopenia
    • Argiles JM, Busquets S, Felipe A, Lopez-Soriano FJ, (2005) Molecular mechanisms involved in muscle wasting in cancer and ageing: cachexia versus sarcopenia. Int J Biochem Cell Biol 37: 1084-1104.
    • (2005) Int J Biochem Cell Biol , vol.37 , pp. 1084-1104
    • Argiles, J.M.1    Busquets, S.2    Felipe, A.3    Lopez-Soriano, F.J.4
  • 6
    • 49049083353 scopus 로고    scopus 로고
    • Signaling in muscle atrophy and hypertrophy
    • Sandri M, (2008) Signaling in muscle atrophy and hypertrophy. Physiology (Bethesda) 23: 160-170.
    • (2008) Physiology (Bethesda) , vol.23 , pp. 160-170
    • Sandri, M.1
  • 7
    • 0034045950 scopus 로고    scopus 로고
    • Genetic defects in acetylcholine signalling promote protein degradation in muscle cells of Caenorhabditis elegans
    • Szewczyk NJ, Hartman JJ, Barmada SJ, Jacobson LA, (2000) Genetic defects in acetylcholine signalling promote protein degradation in muscle cells of Caenorhabditis elegans. J Cell Sci 113: 2003-2010.
    • (2000) J Cell Sci , vol.113 , pp. 2003-2010
    • Szewczyk, N.J.1    Hartman, J.J.2    Barmada, S.J.3    Jacobson, L.A.4
  • 8
    • 0141865502 scopus 로고    scopus 로고
    • Activated EGL-15 FGF receptor promotes protein degradation in muscles of Caenorhabditis elegans
    • Szewczyk NJ, Jacobson LA, (2003) Activated EGL-15 FGF receptor promotes protein degradation in muscles of Caenorhabditis elegans. EMBO J 22: 5058-5067.
    • (2003) EMBO J , vol.22 , pp. 5058-5067
    • Szewczyk, N.J.1    Jacobson, L.A.2
  • 9
    • 0036261726 scopus 로고    scopus 로고
    • Activation of Ras and the MAP kinase pathway promotes protein degradation in muscle cells of Caenorhabditis elegans
    • Szewczyk NJ, Peterson BK, Jacobson LA, (2002) Activation of Ras and the MAP kinase pathway promotes protein degradation in muscle cells of Caenorhabditis elegans. Mol Cell Biol 22: 4181-4188.
    • (2002) Mol Cell Biol , vol.22 , pp. 4181-4188
    • Szewczyk, N.J.1    Peterson, B.K.2    Jacobson, L.A.3
  • 10
    • 33847192463 scopus 로고    scopus 로고
    • Opposed growth factor signals control protein degradation in muscles of Caenorhabditis elegans
    • Szewczyk NJ, Peterson BK, Barmada SJ, Parkinson LP, Jacobson LA, (2007) Opposed growth factor signals control protein degradation in muscles of Caenorhabditis elegans. EMBO J 26: 935-943.
    • (2007) EMBO J , vol.26 , pp. 935-943
    • Szewczyk, N.J.1    Peterson, B.K.2    Barmada, S.J.3    Parkinson, L.P.4    Jacobson, L.A.5
  • 11
    • 77954035435 scopus 로고    scopus 로고
    • Caenorhabditis elegans behavioral genetics: where are the knobs?
    • Avery L, (2010) Caenorhabditis elegans behavioral genetics: where are the knobs? BMC Biol 8: 69.
    • (2010) BMC Biol , vol.8 , pp. 69
    • Avery, L.1
  • 12
    • 0016063911 scopus 로고
    • The genetics of Caenorhabditis elegans
    • Brenner S, (1974) The genetics of Caenorhabditis elegans. Genetics 77: 71-94.
    • (1974) Genetics , vol.77 , pp. 71-94
    • Brenner, S.1
  • 14
    • 0027528788 scopus 로고
    • The genetics of feeding in Caenorhabditis elegans
    • Avery L, (1993) The genetics of feeding in Caenorhabditis elegans. Genetics 133: 897-917.
    • (1993) Genetics , vol.133 , pp. 897-917
    • Avery, L.1
  • 15
    • 0025254082 scopus 로고
    • Genetic analysis of defecation in Caenorhabditis elegans
    • Thomas JH, (1990) Genetic analysis of defecation in Caenorhabditis elegans. Genetics 124: 855-872.
    • (1990) Genetics , vol.124 , pp. 855-872
    • Thomas, J.H.1
  • 16
    • 0034079756 scopus 로고    scopus 로고
    • Fragile skeletal muscle attachments in dystrophic mutants of Caenorhabditis elegans: isolation and characterization of the mua genes
    • Plenefisch JD, Zhu X, Hedgecock EM, (2000) Fragile skeletal muscle attachments in dystrophic mutants of Caenorhabditis elegans: isolation and characterization of the mua genes. Development 127: 1197-1207.
    • (2000) Development , vol.127 , pp. 1197-1207
    • Plenefisch, J.D.1    Zhu, X.2    Hedgecock, E.M.3
  • 17
    • 0032545933 scopus 로고    scopus 로고
    • Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans
    • Fire A, Xu S, Montgomery MK, Kostas SA, Driver SE, et al. (1998) Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans. Nature 391: 806-811.
    • (1998) Nature , vol.391 , pp. 806-811
    • Fire, A.1    Xu, S.2    Montgomery, M.K.3    Kostas, S.A.4    Driver, S.E.5
  • 18
    • 33749023011 scopus 로고    scopus 로고
    • Minimizing the risk of reporting false positives in large-scale RNAi screens
    • Echeverri CJ, Beachy PA, Baum B, Boutros M, Buchholz F, et al. (2006) Minimizing the risk of reporting false positives in large-scale RNAi screens. Nat Methods 3: 777-779.
    • (2006) Nat Methods , vol.3 , pp. 777-779
    • Echeverri, C.J.1    Beachy, P.A.2    Baum, B.3    Boutros, M.4    Buchholz, F.5
  • 19
    • 0034676457 scopus 로고    scopus 로고
    • Functional genomic analysis of C. elegans chromosome I by systematic RNA interference
    • Fraser AG, Kamath RS, Zipperlen P, Martinez-Campos M, Sohrmann M, et al. (2000) Functional genomic analysis of C. elegans chromosome I by systematic RNA interference. Nature 408: 325-330.
    • (2000) Nature , vol.408 , pp. 325-330
    • Fraser, A.G.1    Kamath, R.S.2    Zipperlen, P.3    Martinez-Campos, M.4    Sohrmann, M.5
  • 20
    • 0037448540 scopus 로고    scopus 로고
    • Systematic functional analysis of the Caenorhabditis elegans genome using RNAi
    • Kamath RS, Fraser AG, Dong Y, Poulin G, Durbin R, et al. (2003) Systematic functional analysis of the Caenorhabditis elegans genome using RNAi. Nature 421: 231-237.
    • (2003) Nature , vol.421 , pp. 231-237
    • Kamath, R.S.1    Fraser, A.G.2    Dong, Y.3    Poulin, G.4    Durbin, R.5
  • 21
    • 7444270371 scopus 로고    scopus 로고
    • Toward improving Caenorhabditis elegans phenome mapping with an ORFeome-based RNAi library
    • Rual JF, Ceron J, Koreth J, Hao T, Nicot AS, et al. (2004) Toward improving Caenorhabditis elegans phenome mapping with an ORFeome-based RNAi library. Genome Res 14: 2162-2168.
    • (2004) Genome Res , vol.14 , pp. 2162-2168
    • Rual, J.F.1    Ceron, J.2    Koreth, J.3    Hao, T.4    Nicot, A.S.5
  • 22
    • 0141852285 scopus 로고    scopus 로고
    • Degradation of transgene-coded and endogenous proteins in the muscles of Caenorhabditis elegans
    • Fostel JL, Coste LB, Jacobson LA, (2003) Degradation of transgene-coded and endogenous proteins in the muscles of Caenorhabditis elegans. Biochem Biophys Res Commun 312: 173-177.
    • (2003) Biochem Biophys Res Commun , vol.312 , pp. 173-177
    • Fostel, J.L.1    Coste, L.B.2    Jacobson, L.A.3
  • 23
    • 0030884259 scopus 로고    scopus 로고
    • Transgene-coded chimeric proteins as reporters of intracellular proteolysis: starvation-induced catabolism of a lacZ fusion protein in muscle cells of Caenorhabditis elegans
    • Zdinak LA, Greenberg IB, Szewczyk NJ, Barmada SJ, Cardamone Rayner M, et al. (1997) Transgene-coded chimeric proteins as reporters of intracellular proteolysis: starvation-induced catabolism of a lacZ fusion protein in muscle cells of Caenorhabditis elegans. J Cell Biochem 67: 143-153.
    • (1997) J Cell Biochem , vol.67 , pp. 143-153
    • Zdinak, L.A.1    Greenberg, I.B.2    Szewczyk, N.J.3    Barmada, S.J.4    Cardamone Rayner, M.5
  • 24
    • 48549107440 scopus 로고    scopus 로고
    • Differential effects of resistance and endurance exercise in the fed state on signalling molecule phosphorylation and protein synthesis in human muscle
    • Wilkinson SB, Phillips SM, Atherton PJ, Patel R, Yarasheski KE, et al. (2008) Differential effects of resistance and endurance exercise in the fed state on signalling molecule phosphorylation and protein synthesis in human muscle. J Physiol 586: 3701-3717.
    • (2008) J Physiol , vol.586 , pp. 3701-3717
    • Wilkinson, S.B.1    Phillips, S.M.2    Atherton, P.J.3    Patel, R.4    Yarasheski, K.E.5
  • 25
    • 0037174629 scopus 로고    scopus 로고
    • Timing requirements for insulin/IGF-1 signaling in C. elegans
    • Dillin A, Crawford DK, Kenyon C, (2002) Timing requirements for insulin/IGF-1 signaling in C. elegans. Science 298: 830-834.
    • (2002) Science , vol.298 , pp. 830-834
    • Dillin, A.1    Crawford, D.K.2    Kenyon, C.3
  • 26
    • 41349102391 scopus 로고    scopus 로고
    • Evolutionary plasticity of genetic interaction networks
    • Tischler J, Lehner B, Fraser AG, (2008) Evolutionary plasticity of genetic interaction networks. Nat Genet 40: 390-391.
    • (2008) Nat Genet , vol.40 , pp. 390-391
    • Tischler, J.1    Lehner, B.2    Fraser, A.G.3
  • 27
  • 28
    • 0028810710 scopus 로고
    • Analysis of dominant mutations affecting muscle excitation in Caenorhabditis elegans
    • Reiner DJ, Weinshenker D, Thomas JH, (1995) Analysis of dominant mutations affecting muscle excitation in Caenorhabditis elegans. Genetics 141: 961-976.
    • (1995) Genetics , vol.141 , pp. 961-976
    • Reiner, D.J.1    Weinshenker, D.2    Thomas, J.H.3
  • 29
    • 34548299555 scopus 로고    scopus 로고
    • Linking of autophagy to ubiquitin-proteasome system is important for the regulation of endoplasmic reticulum stress and cell viability
    • Ding WX, Ni HM, Gao W, Yoshimori T, Stolz DB, et al. (2007) Linking of autophagy to ubiquitin-proteasome system is important for the regulation of endoplasmic reticulum stress and cell viability. Am J Pathol 171: 513-524.
    • (2007) Am J Pathol , vol.171 , pp. 513-524
    • Ding, W.X.1    Ni, H.M.2    Gao, W.3    Yoshimori, T.4    Stolz, D.B.5
  • 30
    • 20644440418 scopus 로고    scopus 로고
    • The kinase domain of titin controls muscle gene expression and protein turnover
    • Lange S, Xiang F, Yakovenko A, Vihola A, Hackman P, et al. (2005) The kinase domain of titin controls muscle gene expression and protein turnover. Science 308: 1599-1603.
    • (2005) Science , vol.308 , pp. 1599-1603
    • Lange, S.1    Xiang, F.2    Yakovenko, A.3    Vihola, A.4    Hackman, P.5
  • 31
    • 0037194732 scopus 로고    scopus 로고
    • Chromosomal clustering of muscle-expressed genes in Caenorhabditis elegans
    • Roy PJ, Stuart JM, Lund J, Kim SK, (2002) Chromosomal clustering of muscle-expressed genes in Caenorhabditis elegans. Nature 418: 975-979.
    • (2002) Nature , vol.418 , pp. 975-979
    • Roy, P.J.1    Stuart, J.M.2    Lund, J.3    Kim, S.K.4
  • 32
    • 67651238706 scopus 로고    scopus 로고
    • An integrated strategy to study muscle development and myofilament structure in Caenorhabditis elegans
    • Meissner B, Warner A, Wong K, Dube N, Lorch A, et al. (2009) An integrated strategy to study muscle development and myofilament structure in Caenorhabditis elegans. PLoS Genet 5: e1000537.
    • (2009) PLoS Genet , vol.5
    • Meissner, B.1    Warner, A.2    Wong, K.3    Dube, N.4    Lorch, A.5
  • 34
    • 34250158739 scopus 로고    scopus 로고
    • The C. elegans dense body: anchoring and signaling structure of the muscle
    • Lecroisey C, Segalat L, Gieseler K, (2007) The C. elegans dense body: anchoring and signaling structure of the muscle. J Muscle Res Cell Motil 28: 79-87.
    • (2007) J Muscle Res Cell Motil , vol.28 , pp. 79-87
    • Lecroisey, C.1    Segalat, L.2    Gieseler, K.3
  • 36
    • 36248980418 scopus 로고    scopus 로고
    • Neuronal signaling modulates protein homeostasis in Caenorhabditis elegans post-synaptic muscle cells
    • Garcia SM, Casanueva MO, Silva MC, Amaral MD, Morimoto RI, (2007) Neuronal signaling modulates protein homeostasis in Caenorhabditis elegans post-synaptic muscle cells. Genes Dev 21: 3006-3016.
    • (2007) Genes Dev , vol.21 , pp. 3006-3016
    • Garcia, S.M.1    Casanueva, M.O.2    Silva, M.C.3    Amaral, M.D.4    Morimoto, R.I.5
  • 37
    • 40149095757 scopus 로고    scopus 로고
    • Partial restoration of mutant enzyme homeostasis in three distinct lysosomal storage disease cell lines by altering calcium homeostasis
    • Mu TW, Fowler DM, Kelly JW, (2008) Partial restoration of mutant enzyme homeostasis in three distinct lysosomal storage disease cell lines by altering calcium homeostasis. PLoS Biol 6: e26.
    • (2008) PLoS Biol , vol.6
    • Mu, T.W.1    Fowler, D.M.2    Kelly, J.W.3
  • 38
    • 77952501011 scopus 로고    scopus 로고
    • Endoplasmic reticulum Ca2+ increases enhance mutant glucocerebrosidase proteostasis
    • Ong DS, Mu TW, Palmer AE, Kelly JW, (2010) Endoplasmic reticulum Ca2+ increases enhance mutant glucocerebrosidase proteostasis. Nat Chem Biol 6: 424-432.
    • (2010) Nat Chem Biol , vol.6 , pp. 424-432
    • Ong, D.S.1    Mu, T.W.2    Palmer, A.E.3    Kelly, J.W.4
  • 40
  • 41
    • 77957124347 scopus 로고    scopus 로고
    • The beta subunit of voltage-gated Ca2+ channels
    • Buraei Z, Yang J, (2010) The beta subunit of voltage-gated Ca2+ channels. Physiol Rev 90: 1461-1506.
    • (2010) Physiol Rev , vol.90 , pp. 1461-1506
    • Buraei, Z.1    Yang, J.2
  • 42
    • 0030731428 scopus 로고    scopus 로고
    • Regulation of stability and function of the epithelial Na+ channel (ENaC) by ubiquitination
    • Staub O, Gautschi I, Ishikawa T, Breitschopf K, Ciechanover A, et al. (1997) Regulation of stability and function of the epithelial Na+ channel (ENaC) by ubiquitination. EMBO J 16: 6325-6336.
    • (1997) EMBO J , vol.16 , pp. 6325-6336
    • Staub, O.1    Gautschi, I.2    Ishikawa, T.3    Breitschopf, K.4    Ciechanover, A.5


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