Rapid characterization of protein chips using microwave-assisted protein tryptic digestion and MALDI mass spectrometry

Langmuir

Volumn 27, Issue 16, 2011, Pages 10098-10105

  Ha, Na Young ^a   Kim, Shin Hye ^a   Lee, Tae Geol ^a   Han, Sang Yun ^a  

^a Korea Research Institute of Standards and Science   (South Korea)

Author keywords

[No Author keywords available]

Indexed keywords

DIGESTION EFFICIENCY; DIGESTION METHOD; ENZYMATIC DIGESTIONS; FETAL BOVINE SERUM; HIGH-SPEED; HIGH-THROUGHPUT; IMAGING MASS SPECTROMETRY; INCUBATION STUDY; INCUBATION TIME; LABEL FREE; MALDI-MASS SPECTROMETRY; MICROWAVE-ASSISTED; MODEL PROTEINS; ON CHIPS; PEPTIDE MASS FINGERPRINTING; PROTEIN ARRAYS; PROTEIN CHIP; SERUM ALBUMIN; SPECTROMETRY TECHNIQUE; SURFACE MASS; TRYPTIC DIGESTION;

BODY FLUIDS; CHARACTERIZATION; MASS SPECTROMETERS; MICROWAVES; SECONDARY ION MASS SPECTROMETRY; SELF ASSEMBLED MONOLAYERS; SPECTROMETRY;

PROTEINS;

BOVINE SERUM ALBUMIN; TRYPSIN; TUBULIN;

ANIMAL; ARTICLE; CATTLE; CHEMISTRY; MASS SPECTROMETRY; METABOLISM; METHODOLOGY; MICROWAVE RADIATION; PROTEIN MICROARRAY;

ANIMALS; CATTLE; MICROWAVES; PROTEIN ARRAY ANALYSIS; SERUM ALBUMIN, BOVINE; SPECTROMETRY, MASS, MATRIX-ASSISTED LASER DESORPTION-IONIZATION; TRYPSIN; TUBULIN;

EID: 80051540049     PISSN: 07437463     EISSN: 15205827     Source Type: Journal    
DOI: 10.1021/la201812a     Document Type: Article

References (40)

1. Hillenkamp, F.; Peter-Katalinic, J. MALDI MS: A Practical Guide to Instrumentation, Methods, and Application; Wiley-VCH: Weinheim, Germany, 2007.
2. Aebersold, R.; Mann, M. Nature 2003, 422, 198-207
3. Cornett, D. S.; Reyzer, M. L.; Chaurand, P.; Caprioli, R. M. Nat. Methods 2007, 4, 828-833
4. McDonnell, L. A.; Heeren, R. M. A. Mass Spectrom. Rev. 2007, 26, 606-643
5. Gurard-Levin, Z. A.; Mrksich, M. Annu. Rev. Anal. Chem. 2008, 767-800
6. Mitchell, P. Nat. Biotechnol. 2002, 20, 225-229
7. Lee, Y. S.; Mrksich, M. Trends Biotechnol. 2002, 20, S14-S18
8. Evans-Nguyen, K. M.; Tao, S. C.; Zhu, H.; Cotter, R. Anal. Chem. 2008, 80, 1448-1458
9. Groseclose, M. R.; Andersson, M.; Hardesty, W. M.; Caprioli, R. M. J. Mass. Spectrom. 2007, 42, 254-262
10. Stauber, J.; MacAleese, L.; Franck, J.; Claude, E.; Snel, M.; Kaletas, B. K.; Wiel, I. M. V. D.; Wisztorski, M.; Fournier, I.; Heeren, R. M. A. J. Am. Soc. Mass Spectrom. 2010, 21, 338-347
11. Jungmann, J. H.; MacAleese, L.; Buijs, R.; Giskes, F.; de Snaijer, A.; Visser, J.; Visschers, J.; Vrakking, M. J. J.; Heeren, R. M. A. J. Am. Soc. Mass Spectrom. 2010, 21, 2023-2030
12. Love, J. C.; Estroff, L. A.; Kriebel, J. K.; Nuzzo, R. G.; Whitesides, G. M. Chem. Rev. 2005, 105, 1103-1169
13. Mrksich, M. ACS Nano 2008, 2, 7-18
14. Su, J.; Mrksich, M. Langmuir 2003, 19, 4867-4870
15. Su, J.; Mrksich, M. Angew. Chem., Int. Ed. 2002, 41, 4715-4718
16. Ha, T. K.; Lee, T. G.; Song, N. W.; Moon, D. W.; Han, S. Y. Anal. Chem. 2008, 80, 8526-8531
17. Ha, T. K.; Oh, H. B.; Chung, J.; Lee, T. G.; Han, S. Y. Langmuir 2009, 25, 3692-3697
18. Min, D.; Tang, W.; Mrksich, M. Nat. Biotechnol. 2004, 22, 717-723
19. Min, D.; Yeo, W.; Mrksich, M. Anal. Chem. 2004, 76, 3923-3929
20. Tsubery, H.; Mrksich, M. Langmuir 2008, 24, 5433-5438
21. Yeo, W.; Min, D.; Hsieh, R.; Greene, G.; Mrksich, M. Angew. Chem., Int. Ed. 2005, 44, 5480-5483
22. Marin, V.; Bayburt, T.; Sligar, S.; Mrksich, M. Angew. Chem., Int. Ed. 2007, 46, 8796-8798
23. Patrie, S.; Mrksich, M. Anal. Chem. 2007, 79, 5878-5887
24. Kyo, M.; Usui-Aoki, K.; Koga, H. Anal. Chem. 2005, 77, 7115-7121
25. Nedelkov, D.; Neolson, R. W. Trends Biotechnol. 2003, 21, 301-305
26. Nedelkov, D. Anal. Chem. 2007, 79, 5987-5990
27. Bellon, S.; Buchmann, W.; Gonnet, F.; Jarroux, N.; Anger-Leroy, M.; Guillonneau, F.; Daniel, R. Anal. Chem. 2009, 81, 7695-7702
28. Pappin, D. J.; Hojrup, P.; Bleasby, A. J. Curr. Biol. 1993, 3, 327-332
29. Yates, J. R.; Speicher, S.; Griffin, P. R.; Hunkapiller, T. Anal. Biochem. 1993, 214, 397-408
30. Caputo, E.; Moharram, R.; Martin, B. M. Anal. Biochem. 2003, 321, 116-124
31. Ge, Y.; Gibbs, B. F.; Masse, R. Anal. Chem. 2005, 77, 3644-3650
32. Tang, N.; Tornatore, P.; Weinberger, S. R. Mass Spectrom. Rev. 2004, 23, 34-44
33. Seok, H. J.; Hong, M. Y.; Kim, Y. J.; Han, M. K.; Lee, D.; Lee, J. H.; Yoo, J. S.; Kim, H. S. Anal. Biochem. 2005, 337, 294-307
34. Lill, J. R.; Ingle, E. S.; Liu, P. S.; Pham, V.; Sandoval, W. N. Mass Spectrom. Rev. 2007, 26, 657-671
35. Pramanik, B. N.; Mirza, U. A.; Ing, Y. H.; Liu, Y. H.; Bartner, P. L.; Weber, P. C.; Bose, A. K. Protein Sci. 2002, 11, 2676-2687
36. Sun, W.; Gao, S.; Wang, L.; Chen, Y.; Wu, S.; Wang, X.; Zheng, D.; Gao, Y. Mol. Cell. Proteomics 2006, 5, 769-776
37. Lin, S.; Yao, G.; Qi, D.; Li, Y.; Deng, C.; Yang, P.; Zhang, X. Anal. Chem. 2008, 80, 3655-3665
38. Chen, W. Y.; Chen, Y. C. Anal. Chem. 2007, 79, 2394-2401
39. Hahn, H. W.; Rainer, M.; Ringer, T.; Huck, C. W.; Bonn, G. K. J. Proteome Res. 2009, 8, 4225-4230
40. Bose, A. K.; Banik, B. K.; Lavlinskaia, N.; Jayaraman, M.; Manhas, M. S. CHEMTECH 1997, 27, 18-24