-
1
-
-
0018036889
-
Mobility of histones on the chromosome of simian virus 40
-
P. Beard Mobility of histones on the chromosome of simian virus 40 Cell 15 1978 955 967
-
(1978)
Cell
, vol.15
, pp. 955-967
-
-
Beard, P.1
-
2
-
-
0037133348
-
Mechanical disruption of individual nucleosomes reveals a reversible multistage release of DNA
-
DOI 10.1073/pnas.022638399
-
B.D. Brower-Toland, C.L. Smith, R.C. Yeh, J.T. Lis, C.L. Peterson, and M.D. Wang Mechanical disruption of individual nucleosomes reveals a reversible multistage release of DNA Proc. Natl. Acad. Sci. USA 99 2002 1960 1965 (Pubitemid 34168997)
-
(2002)
Proceedings of the National Academy of Sciences of the United States of America
, vol.99
, Issue.4
, pp. 1960-1965
-
-
Brower-Toland, B.D.1
Smith, C.L.2
Yeh, R.C.3
Lis, J.T.4
Peterson, C.L.5
Wang, M.D.6
-
3
-
-
0023040461
-
Escherichia coli single-strand binding protein forms multiple, distinct complexes with single-stranded DNA
-
W. Bujalowski, and T.M. Lohman Escherichia coli single-strand binding protein forms multiple, distinct complexes with single-stranded DNA Biochemistry 25 1986 7799 7802
-
(1986)
Biochemistry
, vol.25
, pp. 7799-7802
-
-
Bujalowski, W.1
Lohman, T.M.2
-
5
-
-
33847795537
-
Regulation of bacterial RecA protein function
-
DOI 10.1080/10409230701260258, PII 772603338
-
M.M. Cox Regulation of bacterial RecA protein function Crit. Rev. Biochem. Mol. Biol. 42 2007 41 63 (Pubitemid 46391133)
-
(2007)
Critical Reviews in Biochemistry and Molecular Biology
, vol.42
, Issue.1
, pp. 41-63
-
-
Cox, M.M.1
-
6
-
-
35148860246
-
Reptation of a Polymer Chain in the Presence of Fixed Obstacles
-
P.G. de Gennes Reptation of a Polymer Chain in the Presence of Fixed Obstacles J. Chem. Phys. 55 1971 572 579
-
(1971)
J. Chem. Phys.
, vol.55
, pp. 572-579
-
-
De Gennes, P.G.1
-
7
-
-
33645004171
-
Intrinsic rates and activation free energies from single-molecule pulling experiments
-
O.K. Dudko, G. Hummer, and A. Szabo Intrinsic rates and activation free energies from single-molecule pulling experiments Phys. Rev. Lett. 96 2006 108101
-
(2006)
Phys. Rev. Lett.
, vol.96
, pp. 108101
-
-
Dudko, O.K.1
Hummer, G.2
Szabo, A.3
-
8
-
-
57349124448
-
Theory, analysis, and interpretation of single-molecule force spectroscopy experiments
-
O.K. Dudko, G. Hummer, and A. Szabo Theory, analysis, and interpretation of single-molecule force spectroscopy experiments Proc. Natl. Acad. Sci. USA 105 2008 15755 15760
-
(2008)
Proc. Natl. Acad. Sci. USA
, vol.105
, pp. 15755-15760
-
-
Dudko, O.K.1
Hummer, G.2
Szabo, A.3
-
9
-
-
49449107340
-
Visualizing one-dimensional diffusion of proteins along DNA
-
J. Gorman, and E.C. Greene Visualizing one-dimensional diffusion of proteins along DNA Nat. Struct. Mol. Biol. 15 2008 768 774
-
(2008)
Nat. Struct. Mol. Biol.
, vol.15
, pp. 768-774
-
-
Gorman, J.1
Greene, E.C.2
-
10
-
-
38849204944
-
Direct observation of hierarchical folding in single riboswitch aptamers
-
DOI 10.1126/science.1151298
-
W.J. Greenleaf, K.L. Frieda, D.A. Foster, M.T. Woodside, and S.M. Block Direct observation of hierarchical folding in single riboswitch aptamers Science 319 2008 630 633 (Pubitemid 351197067)
-
(2008)
Science
, vol.319
, Issue.5863
, pp. 630-633
-
-
Greenleaf, W.J.1
Frieda, K.L.2
Foster, D.A.N.3
Woodside, M.T.4
Block, S.M.5
-
11
-
-
0029987587
-
Probing the interaction between two single molecules: Fluorescence resonance energy transfer between a single donor and a single acceptor
-
DOI 10.1073/pnas.93.13.6264
-
T. Ha, T. Enderle, D.F. Ogletree, D.S. Chemla, P.R. Selvin, and S. Weiss Probing the interaction between two single molecules: fluorescence resonance energy transfer between a single donor and a single acceptor Proc. Natl. Acad. Sci. USA 93 1996 6264 6268 (Pubitemid 26230293)
-
(1996)
Proceedings of the National Academy of Sciences of the United States of America
, vol.93
, Issue.13
, pp. 6264-6268
-
-
Ha, T.1
Enderle, Th.2
Ogletree, D.F.3
Chemla, D.S.4
Selvin, P.R.5
Weiss, S.6
-
12
-
-
0037057630
-
Initiation and re-initiation of DNA unwinding by the Escherichia coli Rep helicase
-
T. Ha, I. Rasnik, W. Cheng, H.P. Babcock, G.H. Gauss, T.M. Lohman, and S. Chu Initiation and re-initiation of DNA unwinding by the Escherichia coli Rep helicase Nature 419 2002 638 641
-
(2002)
Nature
, vol.419
, pp. 638-641
-
-
Ha, T.1
Rasnik, I.2
Cheng, W.3
Babcock, H.P.4
Gauss, G.H.5
Lohman, T.M.6
Chu, S.7
-
13
-
-
34248647207
-
SSB protein limits RecOR binding onto single-stranded DNA
-
DOI 10.1074/jbc.M611007200
-
M.D. Hobbs, A. Sakai, and M.M. Cox SSB protein limits RecOR binding onto single-stranded DNA J. Biol. Chem. 282 2007 11058 11067 (Pubitemid 47100735)
-
(2007)
Journal of Biological Chemistry
, vol.282
, Issue.15
, pp. 11058-11067
-
-
Hobbs, M.D.1
Sakai, A.2
Cox, M.M.3
-
14
-
-
68149120313
-
Nucleosomal fluctuations govern the transcription dynamics of RNA polymerase II
-
C. Hodges, L. Bintu, L. Lubkowska, M. Kashlev, and C. Bustamante Nucleosomal fluctuations govern the transcription dynamics of RNA polymerase II Science 325 2009 626 628
-
(2009)
Science
, vol.325
, pp. 626-628
-
-
Hodges, C.1
Bintu, L.2
Lubkowska, L.3
Kashlev, M.4
Bustamante, C.5
-
15
-
-
35348897239
-
Fluorescence-force spectroscopy maps two-dimensional reaction landscape of the holliday junction
-
DOI 10.1126/science.1146113
-
S. Hohng, R. Zhou, M.K. Nahas, J. Yu, K. Schulten, D.M. Lilley, and T. Ha Fluorescence-force spectroscopy maps two-dimensional reaction landscape of the holliday junction Science 318 2007 279 283 (Pubitemid 47574856)
-
(2007)
Science
, vol.318
, Issue.5848
, pp. 279-283
-
-
Hohng, S.1
Zhou, R.2
Nahas, M.K.3
Yu, J.4
Schulten, K.5
Lilley, D.M.J.6
Ha, T.7
-
16
-
-
0037180443
-
Escherichia coli RecO protein anneals ssDNA complexed with its cognate ssDNA-binding protein: A common step in genetic recombination
-
DOI 10.1073/pnas.252633399
-
N. Kantake, M.V. Madiraju, T. Sugiyama, and S.C. Kowalczykowski Escherichia coli RecO protein anneals ssDNA complexed with its cognate ssDNA-binding protein: A common step in genetic recombination Proc. Natl. Acad. Sci. USA 99 2002 15327 15332 (Pubitemid 35403934)
-
(2002)
Proceedings of the National Academy of Sciences of the United States of America
, vol.99
, Issue.24
, pp. 15327-15332
-
-
Kantake, N.1
Madiraju, M.V.V.M.2
Sugiyama, T.3
Kowalczykowski, S.C.4
-
17
-
-
0037006790
-
2+-dependent conformational change of RNA studied by fluorescence correlation and FRET on immobilized single molecules
-
DOI 10.1073/pnas.032077799
-
H.D. Kim, G.U. Nienhaus, T. Ha, J.W. Orr, J.R. Williamson, and S. Chu Mg2+-dependent conformational change of RNA studied by fluorescence correlation and FRET on immobilized single molecules Proc. Natl. Acad. Sci. USA 99 2002 4284 4289 (Pubitemid 34285977)
-
(2002)
Proceedings of the National Academy of Sciences of the United States of America
, vol.99
, Issue.7
, pp. 4284-4289
-
-
Kim, H.D.1
Nienhaus, G.U.2
Ha, T.3
Orr, J.W.4
Williamson, J.R.5
Chu, S.6
-
18
-
-
0037076536
-
Stopped-flow studies of the kinetics of single-stranded DNA binding and wrapping around the Escherichia coli SSB tetramer
-
DOI 10.1021/bi020122z
-
A.G. Kozlov, and T.M. Lohman Stopped-flow studies of the kinetics of single-stranded DNA binding and wrapping around the Escherichia coli SSB tetramer Biochemistry 41 2002 6032 6044 (Pubitemid 34498909)
-
(2002)
Biochemistry
, vol.41
, Issue.19
, pp. 6032-6044
-
-
Kozlov, A.G.1
Lohman, T.M.2
-
19
-
-
77952783935
-
Regulation of single-stranded DNA binding by the C termini of Escherichia coli single-stranded DNA-binding (SSB) protein
-
A.G. Kozlov, M.M. Cox, and T.M. Lohman Regulation of single-stranded DNA binding by the C termini of Escherichia coli single-stranded DNA-binding (SSB) protein J. Biol. Chem. 285 2010 17246 17252
-
(2010)
J. Biol. Chem.
, vol.285
, pp. 17246-17252
-
-
Kozlov, A.G.1
Cox, M.M.2
Lohman, T.M.3
-
20
-
-
0242677113
-
Chromatin dynamics: Nucleosomes go mobile through twist defects
-
I.M. Kulić, and H. Schiessel Chromatin dynamics: nucleosomes go mobile through twist defects Phys. Rev. Lett. 91 2003 148103
-
(2003)
Phys. Rev. Lett.
, vol.91
, pp. 148103
-
-
Kulić, I.M.1
Schiessel, H.2
-
21
-
-
0038298709
-
Nucleosome repositioning via loop formation
-
I.M. Kulić, and H. Schiessel Nucleosome repositioning via loop formation Biophys. J. 84 2003 3197 3211 (Pubitemid 36531767)
-
(2003)
Biophysical Journal
, vol.84
, Issue.5
, pp. 3197-3211
-
-
Kulic, I.M.1
Schiessel, H.2
-
22
-
-
33749354956
-
Saccharomyces cerevisiae replication protein A binds to single-stranded DNA in multiple salt-dependent modes
-
DOI 10.1021/bi060994r
-
S. Kumaran, A.G. Kozlov, and T.M. Lohman Saccharomyces cerevisiae replication protein A binds to single-stranded DNA in multiple salt-dependent modes Biochemistry 45 2006 11958 11973 (Pubitemid 44497821)
-
(2006)
Biochemistry
, vol.45
, Issue.39
, pp. 11958-11973
-
-
Kumaran, S.1
Kozlov, A.G.2
Lohman, T.M.3
-
23
-
-
33646205283
-
Microsecond dynamics of protein-DNA interactions: Direct observation of the wrapping/unwrapping kinetics of single-stranded DNA around the E. coli SSB tetramer
-
S.V. Kuznetsov, A.G. Kozlov, T.M. Lohman, and A. Ansari Microsecond dynamics of protein-DNA interactions: direct observation of the wrapping/unwrapping kinetics of single-stranded DNA around the E. coli SSB tetramer J. Mol. Biol. 359 2006 55 65
-
(2006)
J. Mol. Biol.
, vol.359
, pp. 55-65
-
-
Kuznetsov, S.V.1
Kozlov, A.G.2
Lohman, T.M.3
Ansari, A.4
-
24
-
-
0036284131
-
An automated two-dimensional optical force clamp for single molecule studies
-
M.J. Lang, C.L. Asbury, J.W. Shaevitz, and S.M. Block An automated two-dimensional optical force clamp for single molecule studies Biophys. J. 83 2002 491 501 (Pubitemid 34694752)
-
(2002)
Biophysical Journal
, vol.83
, Issue.1
, pp. 491-501
-
-
Lang, M.J.1
Asbury, C.L.2
Shaevitz, J.W.3
Block, S.M.4
-
25
-
-
11444262202
-
Rapid spontaneous accessibility of nucleosomal DNA
-
DOI 10.1038/nsmb869
-
G. Li, M. Levitus, C. Bustamante, and J. Widom Rapid spontaneous accessibility of nucleosomal DNA Nat. Struct. Mol. Biol. 12 2005 46 53 (Pubitemid 40082916)
-
(2005)
Nature Structural and Molecular Biology
, vol.12
, Issue.1
, pp. 46-53
-
-
Li, G.1
Levitus, M.2
Bustamante, C.3
Widom, J.4
-
26
-
-
0021770892
-
Kinetics and mechanism of dissociation of cooperatively bound T4 gene 32 protein-single-stranded nucleic acid complexes. 1. Irreversible dissociation induced by sodium chloride concentration jumps
-
T.M. Lohman Kinetics and mechanism of dissociation of cooperatively bound T4 gene 32 protein-single-stranded nucleic acid complexes. 1. Irreversible dissociation induced by sodium chloride concentration jumps Biochemistry 23 1984 4656 4665
-
(1984)
Biochemistry
, vol.23
, pp. 4656-4665
-
-
Lohman, T.M.1
-
27
-
-
0028246888
-
Escherichia coli single-stranded DNA-binding protein: Multiple DNA-binding modes and cooperativities
-
T.M. Lohman, and M.E. Ferrari Escherichia coli single-stranded DNA-binding protein: multiple DNA-binding modes and cooperativities Annu. Rev. Biochem. 63 1994 527 570
-
(1994)
Annu. Rev. Biochem.
, vol.63
, pp. 527-570
-
-
Lohman, T.M.1
Ferrari, M.E.2
-
28
-
-
0021920551
-
Two binding modes in Escherichia coli single strand binding protein-single stranded DNA complexes. Modulation by NaCl concentration
-
T.M. Lohman, and L.B. Overman Two binding modes in Escherichia coli single strand binding protein-single stranded DNA complexes. Modulation by NaCl concentration J. Biol. Chem. 260 1985 3594 3603 (Pubitemid 15114361)
-
(1985)
Journal of Biological Chemistry
, vol.260
, Issue.6
, pp. 3594-3603
-
-
Lohman, T.M.1
Overman, L.B.2
-
29
-
-
0022493915
-
Large-scale overproduction and rapid purification of the Escherichia coli ssb gene product. Expression of the ssb gene under λ P(L) control
-
T.M. Lohman, J.M. Green, and R.S. Beyer Large-scale overproduction and rapid purification of the Escherichia coli ssb gene product. Expression of the ssb gene under lambda PL control Biochemistry 25 1986 21 25 (Pubitemid 16053074)
-
(1986)
Biochemistry
, vol.25
, Issue.1
, pp. 21-25
-
-
Lohman, T.M.1
Green, J.M.2
Beyer, R.S.3
-
30
-
-
1842411320
-
Crystal structure of the nucleosome core particle at 2.8 Å resolution
-
DOI 10.1038/38444
-
K. Luger, A.W. Mäder, R.K. Richmond, D.F. Sargent, and T.J. Richmond Crystal structure of the nucleosome core particle at 2.8 A resolution Nature 389 1997 251 260 (Pubitemid 27406632)
-
(1997)
Nature
, vol.389
, Issue.6648
, pp. 251-260
-
-
Luger, K.1
Mader, A.W.2
Richmond, R.K.3
Sargent, D.F.4
Richmond, T.J.5
-
31
-
-
0028330518
-
Purification and characterization of the Escherichia coli RecO protein. Renaturation of complementary single-stranded DNA molecules catalyzed by the RecO protein
-
C. Luisi-DeLuca, and R. Kolodner Purification and characterization of the Escherichia coli RecO protein. Renaturation of complementary single-stranded DNA molecules catalyzed by the RecO protein J. Mol. Biol. 236 1994 124 138
-
(1994)
J. Mol. Biol.
, vol.236
, pp. 124-138
-
-
Luisi-Deluca, C.1
Kolodner, R.2
-
32
-
-
4644266683
-
A novel structure of DNA repair protein RecO from Deinococcus radiodurans
-
DOI 10.1016/j.str.2004.08.006, PII S0969212604003119
-
N. Makharashvili, O. Koroleva, S. Bera, D.P. Grandgenett, and S. Korolev A novel structure of DNA repair protein RecO from Deinococcus radiodurans Structure 12 2004 1881 1889 (Pubitemid 39298971)
-
(2004)
Structure
, vol.12
, Issue.10
, pp. 1881-1889
-
-
Makharashvili, N.1
Koroleva, O.2
Bera, S.3
Grandgenett, D.P.4
Korolev, S.5
-
33
-
-
59449105411
-
RecR-mediated modulation of RecF dimer specificity for single- and double-stranded DNA
-
N. Makharashvili, T. Mi, O. Koroleva, and S. Korolev RecR-mediated modulation of RecF dimer specificity for single- and double-stranded DNA J. Biol. Chem. 284 2009 1425 1434
-
(2009)
J. Biol. Chem.
, vol.284
, pp. 1425-1434
-
-
Makharashvili, N.1
Mi, T.2
Koroleva, O.3
Korolev, S.4
-
34
-
-
54049101177
-
Bacillus subtilis RecO nucleates RecA onto SsbA-coated single-stranded DNA
-
C. Manfredi, B. Carrasco, S. Ayora, and J.C. Alonso Bacillus subtilis RecO nucleates RecA onto SsbA-coated single-stranded DNA J. Biol. Chem. 283 2008 24837 24847
-
(2008)
J. Biol. Chem.
, vol.283
, pp. 24837-24847
-
-
Manfredi, C.1
Carrasco, B.2
Ayora, S.3
Alonso, J.C.4
-
35
-
-
33750449330
-
Effect of force on mononucleosomal dynamics
-
DOI 10.1073/pnas.0607526103
-
S. Mihardja, A.J. Spakowitz, Y. Zhang, and C. Bustamante Effect of force on mononucleosomal dynamics Proc. Natl. Acad. Sci. USA 103 2006 15871 15876 (Pubitemid 44657559)
-
(2006)
Proceedings of the National Academy of Sciences of the United States of America
, vol.103
, Issue.43
, pp. 15871-15876
-
-
Mihardja, S.1
Spakowitz, A.J.2
Zhang, Y.3
Bustamante, C.4
-
36
-
-
1942423138
-
Probing single-stranded DNA conformational flexibility using fluorescence spectroscopy
-
M.C. Murphy, I. Rasnik, W. Cheng, T.M. Lohman, and T. Ha Probing single-stranded DNA conformational flexibility using fluorescence spectroscopy Biophys. J. 86 2004 2530 2537 (Pubitemid 38524439)
-
(2004)
Biophysical Journal
, vol.86
, Issue.4
, pp. 2530-2537
-
-
Murphy, M.C.1
Rasnik, I.2
Cheng, W.3
Lohman, T.M.4
Ha, T.5
-
37
-
-
0028766432
-
Direct observation of tube-like motion of a single polymer chain
-
T.T. Perkins, D.E. Smith, and S. Chu Direct observation of tube-like motion of a single polymer chain Science 264 1994 819 822 (Pubitemid 24194329)
-
(1994)
Science
, vol.264
, Issue.5160
, pp. 819-822
-
-
Perkins, T.T.1
Smith, D.E.2
Chu, S.3
-
38
-
-
0028791330
-
Mechanism of protein access to specific DNA sequences in chromatin: A dynamic equilibrium model for gene regulation
-
K.J. Polach, and J. Widom Mechanism of protein access to specific DNA sequences in chromatin: a dynamic equilibrium model for gene regulation J. Mol. Biol. 254 1995 130 149
-
(1995)
J. Mol. Biol.
, vol.254
, pp. 130-149
-
-
Polach, K.J.1
Widom, J.2
-
39
-
-
0033887437
-
Structure of the DNA binding domain of E. coli SSB bound to ssDNA
-
DOI 10.1038/77943
-
S. Raghunathan, A.G. Kozlov, T.M. Lohman, and G. Waksman Structure of the DNA binding domain of E. coli SSB bound to ssDNA Nat. Struct. Biol. 7 2000 648 652 (Pubitemid 30636675)
-
(2000)
Nature Structural Biology
, vol.7
, Issue.8
, pp. 648-652
-
-
Raghunathan, S.1
Kozlov, A.G.2
Lohman, T.M.3
Waksman, G.4
-
41
-
-
70350491426
-
Multiple human single-stranded DNA binding proteins function in genome maintenance: Structural, biochemical and functional analysis
-
D.J. Richard, E. Bolderson, and K.K. Khanna Multiple human single-stranded DNA binding proteins function in genome maintenance: structural, biochemical and functional analysis Crit. Rev. Biochem. Mol. Biol. 44 2009 98 116
-
(2009)
Crit. Rev. Biochem. Mol. Biol.
, vol.44
, pp. 98-116
-
-
Richard, D.J.1
Bolderson, E.2
Khanna, K.K.3
-
42
-
-
0021755212
-
Escherichia coli single-stranded DNA binding protein is mobile on DNA: 1H NMR study of its interaction with oligo- and polynucleotides
-
R. Römer, U. Schomburg, G. Krauss, and G. Maass Escherichia coli single-stranded DNA binding protein is mobile on DNA: 1H NMR study of its interaction with oligo- and polynucleotides Biochemistry 23 1984 6132 6137
-
(1984)
Biochemistry
, vol.23
, pp. 6132-6137
-
-
Römer, R.1
Schomburg, U.2
Krauss, G.3
Maass, G.4
-
43
-
-
34248664689
-
Dynamic structural rearrangements between DNA binding modes of E. coli SSB protein
-
DOI 10.1016/j.jmb.2007.03.079, PII S0022283607004561
-
R. Roy, A.G. Kozlov, T.M. Lohman, and T. Ha Dynamic structural rearrangements between DNA binding modes of E. coli SSB protein J. Mol. Biol. 369 2007 1244 1257 (Pubitemid 46770769)
-
(2007)
Journal of Molecular Biology
, vol.369
, Issue.5
, pp. 1244-1257
-
-
Roy, R.1
Kozlov, A.G.2
Lohman, T.M.3
Ha, T.4
-
44
-
-
44449134820
-
A practical guide to single-molecule FRET
-
DOI 10.1038/nmeth.1208, PII NMETH.1208
-
R. Roy, S. Hohng, and T. Ha A practical guide to single-molecule FRET Nat. Methods 5 2008 507 516 (Pubitemid 351761757)
-
(2008)
Nature Methods
, vol.5
, Issue.6
, pp. 507-516
-
-
Roy, R.1
Hohng, S.2
Ha, T.3
-
45
-
-
70350488396
-
SSB protein diffusion on single-stranded DNA stimulates RecA filament formation
-
R. Roy, A.G. Kozlov, T.M. Lohman, and T. Ha SSB protein diffusion on single-stranded DNA stimulates RecA filament formation Nature 461 2009 1092 1097
-
(2009)
Nature
, vol.461
, pp. 1092-1097
-
-
Roy, R.1
Kozlov, A.G.2
Lohman, T.M.3
Ha, T.4
-
46
-
-
79960790784
-
Mechanism of RecO recruitment to DNA by single-stranded DNA binding protein
-
in press. Published online April 18, 2011
-
M. Ryzhikov, O. Koroleva, D. Postnov, A. Tran, and S. Korolev Mechanism of RecO recruitment to DNA by single-stranded DNA binding protein Nucleic Acids Res. 2011 in press. Published online April 18, 2011
-
(2011)
Nucleic Acids Res.
-
-
Ryzhikov, M.1
Koroleva, O.2
Postnov, D.3
Tran, A.4
Korolev, S.5
-
47
-
-
59149085483
-
RecFOR and RecOR as distinct RecA loading pathways
-
A. Sakai, and M.M. Cox RecFOR and RecOR as distinct RecA loading pathways J. Biol. Chem. 284 2009 3264 3272
-
(2009)
J. Biol. Chem.
, vol.284
, pp. 3264-3272
-
-
Sakai, A.1
Cox, M.M.2
-
48
-
-
0035820523
-
Polymer reptation and nucleosome repositioning
-
DOI 10.1103/PhysRevLett.86.4414
-
H. Schiessel, J. Widom, R.F. Bruinsma, and W.M. Gelbart Polymer reptation and nucleosome repositioning Phys. Rev. Lett. 86 2001 4414 4417 (Pubitemid 32469567)
-
(2001)
Physical Review Letters
, vol.86
, Issue.19
, pp. 4414-4417
-
-
Schiessel, H.1
Widom, J.2
Bruinsma, R.F.3
Gelbart, W.M.4
-
49
-
-
54349118941
-
SSB as an organizer/mobilizer of genome maintenance complexes
-
R.D. Shereda, A.G. Kozlov, T.M. Lohman, M.M. Cox, and J.L. Keck SSB as an organizer/mobilizer of genome maintenance complexes Crit. Rev. Biochem. Mol. Biol. 43 2008 289 318
-
(2008)
Crit. Rev. Biochem. Mol. Biol.
, vol.43
, pp. 289-318
-
-
Shereda, R.D.1
Kozlov, A.G.2
Lohman, T.M.3
Cox, M.M.4
Keck, J.L.5
-
50
-
-
0343022265
-
Material science: Diffusion of a polymer 'pancake'
-
DOI 10.1038/35018166
-
S.A. Sukhishvili, Y. Chen, J.D. Muller, E. Gratton, K.S. Schweizer, and S. Granick Materials science. Diffusion of a polymer 'pancake' Nature 406 2000 146 (Pubitemid 30468987)
-
(2000)
Nature
, vol.406
, Issue.6792
, pp. 146
-
-
Sukhishvili, S.A.1
Chen, Y.2
Muller, J.D.3
Gratton, E.4
Schweizer, K.S.5
Granick, S.6
-
51
-
-
0028034452
-
Protein interactions in genetic recombination in Escherichia coli. Interactions involving RecO and RecR overcome the inhibition of RecA by single-stranded DNA-binding protein
-
K. Umezu, and R.D. Kolodner Protein interactions in genetic recombination in Escherichia coli. Interactions involving RecO and RecR overcome the inhibition of RecA by single-stranded DNA-binding protein J. Biol. Chem. 269 1994 30005 30013
-
(1994)
J. Biol. Chem.
, vol.269
, pp. 30005-30013
-
-
Umezu, K.1
Kolodner, R.D.2
-
52
-
-
0034069612
-
Single-molecule studies of DNA mechanics
-
DOI 10.1016/S0959-440X(00)00085-3
-
Bustamante, C., Smith, S.B., Liphardt, J., and Smith, D. (2000). Single-molecule studies of DNA mechanics. Curr. Opin. Struct. Biol. 10, 279-285. (Pubitemid 30333096)
-
(2000)
Current Opinion in Structural Biology
, vol.10
, Issue.3
, pp. 279-285
-
-
Bustamante, C.1
Smith, S.B.2
Liphardt, J.3
Smith, D.4
-
53
-
-
0022555837
-
Single-stranded DNA binding proteins required for DNA replication
-
Chase, J.W., and Williams, K.R. (1986). Single-stranded DNA binding proteins required for DNA replication. Annu. Rev. Biochem. 55, 103-136. (Pubitemid 16070765)
-
(1986)
Annual Review of Biochemistry
, vol.VOL. 55
, pp. 103-136
-
-
Chase, J.W.1
Williams, K.R.2
-
54
-
-
0037057630
-
Initiation and re-initiation of DNA unwinding by the Escherichia coli Rep helicase
-
Ha, T., Rasnik, I., Cheng, W., Babcock, H.P., Gauss, G.H., Lohman, T.M., and Chu, S. (2002). Initiation and re-initiation of DNA unwinding by the Escherichia coli Rep helicase. Nature 419, 638-641.
-
(2002)
Nature
, vol.419
, pp. 638-641
-
-
Ha, T.1
Rasnik, I.2
Cheng, W.3
Babcock, H.P.4
Gauss, G.H.5
Lohman, T.M.6
Chu, S.7
-
55
-
-
85003238673
-
Photodestruction intermediates probed by an adjacent reporter molecule
-
Ha, T., and Xu, J. (2003). Photodestruction intermediates probed by an adjacent reporter molecule. Phys. Rev. Lett. 90, 223002.
-
(2003)
Phys. Rev. Lett.
, vol.90
, pp. 223002
-
-
Ha, T.1
Xu, J.2
-
56
-
-
35348897239
-
Fluorescence-force spectroscopy maps two-dimensional reaction landscape of the holliday junction
-
DOI 10.1126/science.1146113
-
Hohng, S., Zhou, R., Nahas, M.K., Yu, J., Schulten, K., Lilley, D.M., and Ha, T. (2007). Fluorescence-force spectroscopy maps two-dimensional reaction landscape of the holliday junction. Science 318, 279-283. (Pubitemid 47574856)
-
(2007)
Science
, vol.318
, Issue.5848
, pp. 279-283
-
-
Hohng, S.1
Zhou, R.2
Nahas, M.K.3
Yu, J.4
Schulten, K.5
Lilley, D.M.J.6
Ha, T.7
-
57
-
-
77951690386
-
Binding specificity of Escherichia coli single-stranded DNA binding protein for the chi subunit of DNA pol III holoenzyme and PriA helicase
-
Kozlov, A.G., Jezewska, M.J., Bujalowski, W., and Lohman, T.M. (2010). Binding specificity of Escherichia coli single-stranded DNA binding protein for the chi subunit of DNA pol III holoenzyme and PriA helicase. Biochemistry 49, 3555-3566.
-
(2010)
Biochemistry
, vol.49
, pp. 3555-3566
-
-
Kozlov, A.G.1
Jezewska, M.J.2
Bujalowski, W.3
Lohman, T.M.4
-
58
-
-
0028246888
-
Escherichia coli single-stranded DNA-binding protein: Multiple DNA-binding modes and cooperativities
-
Lohman, T.M., and Ferrari, M.E. (1994). Escherichia coli single-stranded DNA-binding protein: multiple DNA-binding modes and cooperativities. Annu. Rev. Biochem. 63, 527-570.
-
(1994)
Annu. Rev. Biochem.
, vol.63
, pp. 527-570
-
-
Lohman, T.M.1
Ferrari, M.E.2
-
59
-
-
1942423138
-
Probing single-stranded DNA conformational flexibility using fluorescence spectroscopy
-
Murphy, M.C., Rasnik, I., Cheng, W., Lohman, T.M., and Ha, T. (2004). Probing single-stranded DNA conformational flexibility using fluorescence spectroscopy. Biophys. J. 86, 2530-2537. (Pubitemid 38524439)
-
(2004)
Biophysical Journal
, vol.86
, Issue.4
, pp. 2530-2537
-
-
Murphy, M.C.1
Rasnik, I.2
Cheng, W.3
Lohman, T.M.4
Ha, T.5
-
60
-
-
44449134820
-
A practical guide to single-molecule FRET
-
DOI 10.1038/nmeth.1208, PII NMETH.1208
-
Roy, R., Hohng, S., and Ha, T. (2008). A practical guide to single-molecule FRET. Nat. Methods 5, 507-516. (Pubitemid 351761757)
-
(2008)
Nature Methods
, vol.5
, Issue.6
, pp. 507-516
-
-
Roy, R.1
Hohng, S.2
Ha, T.3
-
61
-
-
70350488396
-
SSB protein diffusion on single-stranded DNA stimulates RecA filament formation
-
Roy, R., Kozlov, A.G., Lohman, T.M., and Ha, T. (2009). SSB protein diffusion on single-stranded DNA stimulates RecA filament formation. Nature 461, 1092-1097.
-
(2009)
Nature
, vol.461
, pp. 1092-1097
-
-
Roy, R.1
Kozlov, A.G.2
Lohman, T.M.3
Ha, T.4
-
62
-
-
0030024985
-
Overstretching B-DNA: The elastic response of individual double-stranded and single-stranded DNA molecules
-
Smith, S.B., Cui, Y., and Bustamante, C. (1996). Overstretching B-DNA: the elastic response of individual double-stranded and single-stranded DNA molecules. Science 271, 795-799.
-
(1996)
Science
, vol.271
, pp. 795-799
-
-
Smith, S.B.1
Cui, Y.2
Bustamante, C.3
-
63
-
-
59649116344
-
Counting RAD51 proteins disassembling from nucleoprotein filaments under tension
-
van Mameren, J., Modesti, M., Kanaar, R., Wyman, C., Peterman, E.J., and Wuite, G.J. (2009). Counting RAD51 proteins disassembling from nucleoprotein filaments under tension. Nature 457, 745-748.
-
(2009)
Nature
, vol.457
, pp. 745-748
-
-
Van Mameren, J.1
Modesti, M.2
Kanaar, R.3
Wyman, C.4
Peterman, E.J.5
Wuite, G.J.6
|