-
1
-
-
34447269248
-
In vivo visualization of actin dynamics and actin interactions by BiFC
-
Anderie, I., and Schmid, A. (2007) In vivo visualization of actin dynamics and actin interactions by BiFC. Cell Biol Int 31: 1131-1135.
-
(2007)
Cell Biol Int
, vol.31
, pp. 1131-1135
-
-
Anderie, I.1
Schmid, A.2
-
2
-
-
0344430112
-
Aptamers switch on fluorescence of triphenylmethane dyes
-
Babendure, J.R., Adams, S.R., and Tsien, R.Y. (2003) Aptamers switch on fluorescence of triphenylmethane dyes. J Am Chem Soc 125: 14716-14717.
-
(2003)
J Am Chem Soc
, vol.125
, pp. 14716-14717
-
-
Babendure, J.R.1
Adams, S.R.2
Tsien, R.Y.3
-
3
-
-
0033519623
-
Localization and anchoring of mRNA in budding yeast
-
Beach, D.L., Salmon, E.D., and Bloom, K. (1999) Localization and anchoring of mRNA in budding yeast. Curr Biol 9: 569-578.
-
(1999)
Curr Biol
, vol.9
, pp. 569-578
-
-
Beach, D.L.1
Salmon, E.D.2
Bloom, K.3
-
4
-
-
0037162469
-
Global analysis of mRNA decay and abundance in Escherichia coli at single-gene resolution using two-color fluorescent DNA microarrays
-
Bernstein, J.A., Khodursky, A.B., Lin, P.H., Lin-Chao, S., and Cohen, S.N. (2002) Global analysis of mRNA decay and abundance in Escherichia coli at single-gene resolution using two-color fluorescent DNA microarrays. Proc Natl Acad Sci USA 99: 9697-9702.
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 9697-9702
-
-
Bernstein, J.A.1
Khodursky, A.B.2
Lin, P.H.3
Lin-Chao, S.4
Cohen, S.N.5
-
5
-
-
0032185810
-
Localization of ASH1 mRNA particles in living yeast
-
Bertrand, E., Chartrand, P., Schaefer, M., Shenoy, S.M., Singer, R.H., and Long, R.M. (1998) Localization of ASH1 mRNA particles in living yeast. Mol Cell 2: 437-445.
-
(1998)
Mol Cell
, vol.2
, pp. 437-445
-
-
Bertrand, E.1
Chartrand, P.2
Schaefer, M.3
Shenoy, S.M.4
Singer, R.H.5
Long, R.M.6
-
6
-
-
33747179417
-
Imaging intracellular fluorescent proteins at nanometer resolution
-
Betzig, E., Patterson, G.H., Sougrat, R., Lindwasser, O.W., Olenych, S., Bonifacino, J.S., etal. (2006) Imaging intracellular fluorescent proteins at nanometer resolution. Science 313: 1642-1645.
-
(2006)
Science
, vol.313
, pp. 1642-1645
-
-
Betzig, E.1
Patterson, G.H.2
Sougrat, R.3
Lindwasser, O.W.4
Olenych, S.5
Bonifacino, J.S.6
-
7
-
-
56149118370
-
Super-resolution imaging in live Caulobacter crescentus cells using photoswitchable EYFP
-
Biteen, J.S., Thompson, M.A., Tselentis, N.K., Bowman, G.R., Shapiro, L., and Moerner, W.E. (2008) Super-resolution imaging in live Caulobacter crescentus cells using photoswitchable EYFP. Nat Methods 5: 947-949.
-
(2008)
Nat Methods
, vol.5
, pp. 947-949
-
-
Biteen, J.S.1
Thompson, M.A.2
Tselentis, N.K.3
Bowman, G.R.4
Shapiro, L.5
Moerner, W.E.6
-
8
-
-
0242416539
-
Noise in eukaryotic gene expression
-
Blake, W.J., Kaern, M., Cantor, C.R., and Collins, J.J. (2003) Noise in eukaryotic gene expression. Nature 422: 633-637.
-
(2003)
Nature
, vol.422
, pp. 633-637
-
-
Blake, W.J.1
Kaern, M.2
Cantor, C.R.3
Collins, J.J.4
-
9
-
-
27144515901
-
Movement of eukaryotic mRNAs between polysomes and cytoplasmic processing bodies
-
Brengues, M., Teixeira, D., and Parker, R. (2005) Movement of eukaryotic mRNAs between polysomes and cytoplasmic processing bodies. Science 310: 486-489.
-
(2005)
Science
, vol.310
, pp. 486-489
-
-
Brengues, M.1
Teixeira, D.2
Parker, R.3
-
10
-
-
0034544815
-
Pre-mRNA processing factors are required for nuclear export
-
Brodsky, A.S., and Silver, P.A. (2000) Pre-mRNA processing factors are required for nuclear export. RNA 6: 1737-1749.
-
(2000)
RNA
, vol.6
, pp. 1737-1749
-
-
Brodsky, A.S.1
Silver, P.A.2
-
11
-
-
33645027986
-
Stochastic protein expression in individual cells at the single molecule level
-
Cai, L., Friedman, N., and Xie, X.S. (2006) Stochastic protein expression in individual cells at the single molecule level. Nature 440: 358-362.
-
(2006)
Nature
, vol.440
, pp. 358-362
-
-
Cai, L.1
Friedman, N.2
Xie, X.S.3
-
12
-
-
35548995356
-
The RNA degradosome of Escherichia coli: an mRNA-degrading machine assembled on RNase E
-
Carpousis, A.J. (2007) The RNA degradosome of Escherichia coli: an mRNA-degrading machine assembled on RNase E. Annu Rev Microbiol 61: 71-87.
-
(2007)
Annu Rev Microbiol
, vol.61
, pp. 71-87
-
-
Carpousis, A.J.1
-
13
-
-
0034700086
-
Crystal structure of yeast initiation factor 4A, a DEAD-box RNA helicase
-
Caruthers, J.M., Johnson, E.R., and McKay, D.B. (2000) Crystal structure of yeast initiation factor 4A, a DEAD-box RNA helicase. Proc Natl Acad Sci USA 97: 13080-13085.
-
(2000)
Proc Natl Acad Sci USA
, vol.97
, pp. 13080-13085
-
-
Caruthers, J.M.1
Johnson, E.R.2
McKay, D.B.3
-
14
-
-
33646591544
-
Transcriptional pulsing of a developmental gene
-
Chubb, J.R., Trcek, T., Shenoy, S.M., and Singer, R.H. (2006) Transcriptional pulsing of a developmental gene. Curr Biol 16: 1018-1025.
-
(2006)
Curr Biol
, vol.16
, pp. 1018-1025
-
-
Chubb, J.R.1
Trcek, T.2
Shenoy, S.M.3
Singer, R.H.4
-
15
-
-
77955640606
-
Fluorescent proteins and their applications in imaging living cells and tissues
-
Chudakov, D.M., Matz, M.V., Lukyanov, S., and Lukyanov, K.A. (2010) Fluorescent proteins and their applications in imaging living cells and tissues. Physiol Rev 90: 1103-1163.
-
(2010)
Physiol Rev
, vol.90
, pp. 1103-1163
-
-
Chudakov, D.M.1
Matz, M.V.2
Lukyanov, S.3
Lukyanov, K.A.4
-
16
-
-
33947632303
-
Use of bimolecular fluorescence complementation to study in vivo interactions between Cdc42p and Rdi1p of Saccharomyces cerevisiae
-
Cole, K.C., McLaughlin, H.W., and Johnson, D.I. (2007) Use of bimolecular fluorescence complementation to study in vivo interactions between Cdc42p and Rdi1p of Saccharomyces cerevisiae. Eukaryot Cell 6: 378-387.
-
(2007)
Eukaryot Cell
, vol.6
, pp. 378-387
-
-
Cole, K.C.1
McLaughlin, H.W.2
Johnson, D.I.3
-
17
-
-
34548524489
-
Spatial complexity and control of a bacterial cell cycle
-
Collier, J., and Shapiro, L. (2007) Spatial complexity and control of a bacterial cell cycle. Curr Opin Biotechnol 18: 333-340.
-
(2007)
Curr Opin Biotechnol
, vol.18
, pp. 333-340
-
-
Collier, J.1
Shapiro, L.2
-
18
-
-
34547637607
-
LambdaN-GFP: an RNA reporter system for live-cell imaging
-
Daigle, N., and Ellenberg, J. (2007) LambdaN-GFP: an RNA reporter system for live-cell imaging. Nat Methods 4: 633-636.
-
(2007)
Nat Methods
, vol.4
, pp. 633-636
-
-
Daigle, N.1
Ellenberg, J.2
-
19
-
-
78349254943
-
Subcellular communication through RNA transport and localized protein synthesis
-
Donnelly, C.J., Fainzilber, M., and Twiss, J.L. (2010) Subcellular communication through RNA transport and localized protein synthesis. Traffic 11: 1498-1505.
-
(2010)
Traffic
, vol.11
, pp. 1498-1505
-
-
Donnelly, C.J.1
Fainzilber, M.2
Twiss, J.L.3
-
20
-
-
0037119587
-
Stochastic gene expression in a single cell
-
Elowitz, M.B., Levine, A.J., Siggia, E.D., and Swain, P.S. (2002) Stochastic gene expression in a single cell. Science 297: 1183-1186.
-
(2002)
Science
, vol.297
, pp. 1183-1186
-
-
Elowitz, M.B.1
Levine, A.J.2
Siggia, E.D.3
Swain, P.S.4
-
21
-
-
77649190126
-
A binary Cy3 aptamer probe composed of folded modules
-
Endo, K., and Nakamura, Y. (2010) A binary Cy3 aptamer probe composed of folded modules. Anal Biochem 400: 103-109.
-
(2010)
Anal Biochem
, vol.400
, pp. 103-109
-
-
Endo, K.1
Nakamura, Y.2
-
22
-
-
78349284400
-
Automated quantitative live cell fluorescence microscopy
-
Fero, M., and Pogliano, K. (2010) Automated quantitative live cell fluorescence microscopy. Cold Spring Harb Perspect Biol 2: a000455.
-
(2010)
Cold Spring Harb Perspect Biol
, vol.2
-
-
Fero, M.1
Pogliano, K.2
-
23
-
-
0038376482
-
Live imaging of endogenous RNA reveals a diffusion and entrapment mechanism for nanos mRNA localization in Drosophila
-
Forrest, K.M., and Gavis, E.R. (2003) Live imaging of endogenous RNA reveals a diffusion and entrapment mechanism for nanos mRNA localization in Drosophila. Curr Biol 13: 1159-1168.
-
(2003)
Curr Biol
, vol.13
, pp. 1159-1168
-
-
Forrest, K.M.1
Gavis, E.R.2
-
24
-
-
62449123034
-
A chance at survival: gene expression noise and phenotypic diversification strategies
-
Fraser, D., and Kaern, M. (2009) A chance at survival: gene expression noise and phenotypic diversification strategies. Mol Microbiol 71: 1333-1340.
-
(2009)
Mol Microbiol
, vol.71
, pp. 1333-1340
-
-
Fraser, D.1
Kaern, M.2
-
25
-
-
33750247101
-
Linking stochastic dynamics to population distribution: an analytical framework of gene expression
-
Friedman, N., Cai, L., and Xie, X.S. (2006) Linking stochastic dynamics to population distribution: an analytical framework of gene expression. Phys Rev Lett 97: 168302.
-
(2006)
Phys Rev Lett
, vol.97
, pp. 168302
-
-
Friedman, N.1
Cai, L.2
Xie, X.S.3
-
26
-
-
66349113402
-
New fluorescence microscopy methods for microbiology: sharper, faster, and quantitative
-
Gitai, Z. (2009) New fluorescence microscopy methods for microbiology: sharper, faster, and quantitative. Curr Opin Microbiol 12: 341-346.
-
(2009)
Curr Opin Microbiol
, vol.12
, pp. 341-346
-
-
Gitai, Z.1
-
27
-
-
3843126332
-
RNA dynamics in live Escherichia coli cells
-
Golding, I., and Cox, E.C. (2004) RNA dynamics in live Escherichia coli cells. Proc Natl Acad Sci USA 101: 11310-11315.
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, pp. 11310-11315
-
-
Golding, I.1
Cox, E.C.2
-
28
-
-
28944434119
-
Real-time kinetics of gene activity in individual bacteria
-
Golding, I., Paulsson, J., Zawilski, S.M., and Cox, E.C. (2005) Real-time kinetics of gene activity in individual bacteria. Cell 123: 1025-1036.
-
(2005)
Cell
, vol.123
, pp. 1025-1036
-
-
Golding, I.1
Paulsson, J.2
Zawilski, S.M.3
Cox, E.C.4
-
29
-
-
35848966372
-
Cytoskeletal elements in bacteria
-
Graumann, P.L. (2007) Cytoskeletal elements in bacteria. Annu Rev Microbiol 61: 589-618.
-
(2007)
Annu Rev Microbiol
, vol.61
, pp. 589-618
-
-
Graumann, P.L.1
-
30
-
-
67649922591
-
Self-organization of the Escherichia coli chemotaxis network imaged with super-resolution light microscopy
-
Greenfield, D., McEvoy, A.L., Shroff, H., Crooks, G.E., Wingreen, N.S., Betzig, E., and Liphardt, J. (2009) Self-organization of the Escherichia coli chemotaxis network imaged with super-resolution light microscopy. PLoS Biol 7: e1000137.
-
(2009)
PLoS Biol
, vol.7
-
-
Greenfield, D.1
McEvoy, A.L.2
Shroff, H.3
Crooks, G.E.4
Wingreen, N.S.5
Betzig, E.6
Liphardt, J.7
-
31
-
-
47249130893
-
Minimally invasive determination of mRNA concentration in single living bacteria
-
Guet, C.C., Bruneaux, L., Min, T.L., Siegal-Gaskins, D., Figueroa, I., Emonet, T., and Cluzel, P. (2008) Minimally invasive determination of mRNA concentration in single living bacteria. Nucleic Acids Res 36: e73.
-
(2008)
Nucleic Acids Res
, vol.36
-
-
Guet, C.C.1
Bruneaux, L.2
Min, T.L.3
Siegal-Gaskins, D.4
Figueroa, I.5
Emonet, T.6
Cluzel, P.7
-
32
-
-
12544250874
-
Phospholipase Cb2 binds to and inhibits phospholipase Cd1
-
Guo, Y., Rebecchi, M., and Scarlata, S. (2005) Phospholipase Cb2 binds to and inhibits phospholipase Cd1. J Biol Chem 280: 1438-1447.
-
(2005)
J Biol Chem
, vol.280
, pp. 1438-1447
-
-
Guo, Y.1
Rebecchi, M.2
Scarlata, S.3
-
33
-
-
0028580734
-
Wavelength mutations and posttranslational autoxidation of green fluorescent protein
-
Heim, R., Prasher, D.C., and Tsien, R.Y. (1994) Wavelength mutations and posttranslational autoxidation of green fluorescent protein. Proc Natl Acad Sci USA 91: 12501-12504.
-
(1994)
Proc Natl Acad Sci USA
, vol.91
, pp. 12501-12504
-
-
Heim, R.1
Prasher, D.C.2
Tsien, R.Y.3
-
34
-
-
33845360042
-
Ultra-high resolution imaging by fluorescence photoactivation localization microscopy (FPALM)
-
Hess, S.T., Girirajan, T., and Mason, M.D. (2006) Ultra-high resolution imaging by fluorescence photoactivation localization microscopy (FPALM). Biophys J 91: 4258-4272.
-
(2006)
Biophys J
, vol.91
, pp. 4258-4272
-
-
Hess, S.T.1
Girirajan, T.2
Mason, M.D.3
-
35
-
-
36849053761
-
Dynamic clustered distribution of hemagglutinin resolved at 40 nm in living cell membranes discriminates between raft theories
-
Hess, S.T., Gould, T.J., Gudheti, M.V., Maas, S.A., Mills, K.D., and Zimmerberg, J. (2007) Dynamic clustered distribution of hemagglutinin resolved at 40 nm in living cell membranes discriminates between raft theories. Proc Natl Acad Sci USA 104: 17370-17375.
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, pp. 17370-17375
-
-
Hess, S.T.1
Gould, T.J.2
Gudheti, M.V.3
Maas, S.A.4
Mills, K.D.5
Zimmerberg, J.6
-
36
-
-
0036241055
-
Visualization of interactions among bZIP and Rel family proteins in living cells using bimolecular fluorescence complementation
-
Hu, C.D., Chinenov, Y., and Kerppola, T.K. (2002) Visualization of interactions among bZIP and Rel family proteins in living cells using bimolecular fluorescence complementation. Mol Cell 9: 789-798.
-
(2002)
Mol Cell
, vol.9
, pp. 789-798
-
-
Hu, C.D.1
Chinenov, Y.2
Kerppola, T.K.3
-
37
-
-
28544443162
-
Spatial regulation of beta-actin translation by Src-dependent phosphorylation of ZBP1
-
Hüttelmaier, S., Zenklusen, D., Lederer, M., Dictenberg, J., Lorenz, M., Meng, X., etal. (2005) Spatial regulation of beta-actin translation by Src-dependent phosphorylation of ZBP1. Nature 438: 512-515.
-
(2005)
Nature
, vol.438
, pp. 512-515
-
-
Hüttelmaier, S.1
Zenklusen, D.2
Lederer, M.3
Dictenberg, J.4
Lorenz, M.5
Meng, X.6
-
38
-
-
51349119090
-
Dark proteins: effect of inclusion body formation on quantification of protein expression
-
Iafolla, M.A., Mazumder, M., Sardana, V., Velauthapillai, T., Pannu, K., and McMillen, D.R. (2008) Dark proteins: effect of inclusion body formation on quantification of protein expression. Proteins 72: 1233-1242.
-
(2008)
Proteins
, vol.72
, pp. 1233-1242
-
-
Iafolla, M.A.1
Mazumder, M.2
Sardana, V.3
Velauthapillai, T.4
Pannu, K.5
McMillen, D.R.6
-
39
-
-
12144289862
-
From silencing to gene expression: real-time analysis in single cells
-
Janicki, S.M., Tsukamoto, T., Salghetti, S.E., Tansey, W.P., Sachidanandam, R., Prasanth, K.V., etal. (2004) From silencing to gene expression: real-time analysis in single cells. Cell 116: 683-698.
-
(2004)
Cell
, vol.116
, pp. 683-698
-
-
Janicki, S.M.1
Tsukamoto, T.2
Salghetti, S.E.3
Tansey, W.P.4
Sachidanandam, R.5
Prasanth, K.V.6
-
40
-
-
38549126635
-
Concurrent fast and slow cycling of a transcriptional activator at an endogenous promoter
-
Karpova, T.S., Kim, M.J., Spriet, C., Nalley, K., Stasevich, T.J., Kherrouche, Z., etal. (2008) Concurrent fast and slow cycling of a transcriptional activator at an endogenous promoter. Science 319: 466-469.
-
(2008)
Science
, vol.319
, pp. 466-469
-
-
Karpova, T.S.1
Kim, M.J.2
Spriet, C.3
Nalley, K.4
Stasevich, T.J.5
Kherrouche, Z.6
-
41
-
-
33745785300
-
Visualization of molecular interactions by fluorescence complementation
-
Kerppola, T.K. (2006) Visualization of molecular interactions by fluorescence complementation. Nat Rev Mol Cell Biol 7: 449-456.
-
(2006)
Nat Rev Mol Cell Biol
, vol.7
, pp. 449-456
-
-
Kerppola, T.K.1
-
42
-
-
54249138245
-
The RNase E of Escherichia coli is a membrane-binding protein
-
Khemici, V., Poljak, L., Luisi, B.F., and Carpousis, A.J. (2008) The RNase E of Escherichia coli is a membrane-binding protein. Mol Microbiol 70: 799-813.
-
(2008)
Mol Microbiol
, vol.70
, pp. 799-813
-
-
Khemici, V.1
Poljak, L.2
Luisi, B.F.3
Carpousis, A.J.4
-
43
-
-
24744465188
-
Binary malachite green aptamer for fluorescent detection of nucleic acids
-
Kolpashchikov, D.M. (2005) Binary malachite green aptamer for fluorescent detection of nucleic acids. J Am Chem Soc 127: 12442-12443.
-
(2005)
J Am Chem Soc
, vol.127
, pp. 12442-12443
-
-
Kolpashchikov, D.M.1
-
44
-
-
0842332406
-
Dynamics of the p53-Mdm2 feedback loop in individual cells
-
Lahav, G., Rosenfeld, N., Sigal, A., Geva-Zatorsky, N., Levine, A.J., Elowitz, M.B., and Alon, U. (2004) Dynamics of the p53-Mdm2 feedback loop in individual cells. Nat Genet 36: 147-150.
-
(2004)
Nat Genet
, vol.36
, pp. 147-150
-
-
Lahav, G.1
Rosenfeld, N.2
Sigal, A.3
Geva-Zatorsky, N.4
Levine, A.J.5
Elowitz, M.B.6
Alon, U.7
-
45
-
-
47849121275
-
Simultaneous transport of different localized mRNA species revealed by live-cell imaging
-
Lange, S., Katayama, Y., Schmid, M., Burkacky, O., Bräuchle, C., Lamb, D.C., and Jansen, R.P. (2008) Simultaneous transport of different localized mRNA species revealed by live-cell imaging. Traffic 9: 1256-1267.
-
(2008)
Traffic
, vol.9
, pp. 1256-1267
-
-
Lange, S.1
Katayama, Y.2
Schmid, M.3
Burkacky, O.4
Bräuchle, C.5
Lamb, D.C.6
Jansen, R.P.7
-
46
-
-
70350344043
-
A single molecule view of gene expression
-
Larson, D.R., Singer, R.H., and Zenklusen, D. (2009) A single molecule view of gene expression. Trends Cell Biol 19: 630-637.
-
(2009)
Trends Cell Biol
, vol.19
, pp. 630-637
-
-
Larson, D.R.1
Singer, R.H.2
Zenklusen, D.3
-
47
-
-
21544473153
-
Real-time RNA profiling within a single bacterium
-
Le, T.T., Harlepp, S., Guet, C.C., Dittmar, K., Emonet, T., Pan, T., and Cluzel, P. (2005) Real-time RNA profiling within a single bacterium. Proc Natl Acad Sci USA 102: 9160-9164.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 9160-9164
-
-
Le, T.T.1
Harlepp, S.2
Guet, C.C.3
Dittmar, K.4
Emonet, T.5
Pan, T.6
Cluzel, P.7
-
48
-
-
33646147144
-
Dynamical determinants of drug-inducible gene expression in a single bacterium
-
Le, T.T., Emonet, T., Harlepp, S., Guet, C.C., and Cluzel, P. (2006) Dynamical determinants of drug-inducible gene expression in a single bacterium. Biophys J 90: 3315-3321.
-
(2006)
Biophys J
, vol.90
, pp. 3315-3321
-
-
Le, T.T.1
Emonet, T.2
Harlepp, S.3
Guet, C.C.4
Cluzel, P.5
-
49
-
-
0037213715
-
Gene expression and the myth of the average cell
-
Levsky, J.M., and Singer, R.H. (2003) Gene expression and the myth of the average cell. Trends Cell Biol 13: 4-6.
-
(2003)
Trends Cell Biol
, vol.13
, pp. 4-6
-
-
Levsky, J.M.1
Singer, R.H.2
-
50
-
-
0034651795
-
Compartmentalization of transcription and translation in Bacillus subtilis
-
Lewis, P.J., Thaker, S.D., and Errington, J. (2000) Compartmentalization of transcription and translation in Bacillus subtilis. EMBO J 19: 710-718.
-
(2000)
EMBO J
, vol.19
, pp. 710-718
-
-
Lewis, P.J.1
Thaker, S.D.2
Errington, J.3
-
51
-
-
11844252081
-
Detecting protein-protein interactions with a green fluorescent protein fragment reassembly trap: scope and mechanism
-
Magliery, T.J., Wilson, C.G., Pan, W., Mishler, D., Ghosh, I., Hamilton, A.D., and Regan, L. (2005) Detecting protein-protein interactions with a green fluorescent protein fragment reassembly trap: scope and mechanism. J Am Chem Soc 127: 146-157.
-
(2005)
J Am Chem Soc
, vol.127
, pp. 146-157
-
-
Magliery, T.J.1
Wilson, C.G.2
Pan, W.3
Mishler, D.4
Ghosh, I.5
Hamilton, A.D.6
Regan, L.7
-
52
-
-
0034859439
-
Specific polar localization of ribosomes in Bacillus subtilis depends on active transcription
-
Mascarenhas, J., Weber, M.H., and Graumann, P.L. (2001) Specific polar localization of ribosomes in Bacillus subtilis depends on active transcription. EMBO Rep 2: 685-689.
-
(2001)
EMBO Rep
, vol.2
, pp. 685-689
-
-
Mascarenhas, J.1
Weber, M.H.2
Graumann, P.L.3
-
53
-
-
0344687406
-
Protein fragment complementation strategies for biochemical network mapping
-
Michnick, S.W. (2003) Protein fragment complementation strategies for biochemical network mapping. Curr Opin Biotechnol 14: 610-617.
-
(2003)
Curr Opin Biotechnol
, vol.14
, pp. 610-617
-
-
Michnick, S.W.1
-
54
-
-
34250870249
-
Single-cell analysis of gene expression by fluorescence microscopy
-
Miyashiro, T., and Goulian, M. (2007) Single-cell analysis of gene expression by fluorescence microscopy. Methods Enzymol 423: 458-475.
-
(2007)
Methods Enzymol
, vol.423
, pp. 458-475
-
-
Miyashiro, T.1
Goulian, M.2
-
55
-
-
12344260570
-
Increasing complexity of the bacterial cytoskeleton
-
Moller-Jensen, J., and Löwe, J. (2005) Increasing complexity of the bacterial cytoskeleton. Curr Opin Cell Biol 17: 75-81.
-
(2005)
Curr Opin Cell Biol
, vol.17
, pp. 75-81
-
-
Moller-Jensen, J.1
Löwe, J.2
-
56
-
-
77954242830
-
Spatial organization of the flow of genetic information in bacteria
-
Montero Llopis, P.M., Jackson, A.F., Sliusarenko, O., Surovtsev, I., Heinritz, J., Emonet, T., and Jacobs-Wagner, C. (2010) Spatial organization of the flow of genetic information in bacteria. Nature 466: 77-81.
-
(2010)
Nature
, vol.466
, pp. 77-81
-
-
Montero Llopis, P.M.1
Jackson, A.F.2
Sliusarenko, O.3
Surovtsev, I.4
Heinritz, J.5
Emonet, T.6
Jacobs-Wagner, C.7
-
57
-
-
52649104026
-
Monitoring the interference of protein-protein interactions in vivo by bimolecular fluorescence complementation: the DnaK case
-
Morell, M., Czihal, P., Hoffmann, R., Otvos, L., Avilés, F.X., and Ventura, S. (2008) Monitoring the interference of protein-protein interactions in vivo by bimolecular fluorescence complementation: the DnaK case. Proteomics 8: 3433-3442.
-
(2008)
Proteomics
, vol.8
, pp. 3433-3442
-
-
Morell, M.1
Czihal, P.2
Hoffmann, R.3
Otvos, L.4
Avilés, F.X.5
Ventura, S.6
-
58
-
-
79952066011
-
Translation-independent localization of mRNA in E. coli
-
Nevo-Dinur, K., Nussbaum-Shochat, A., Ben-Yehuda, S., and Amster-Choder, O. (2011) Translation-independent localization of mRNA in E. coli. Science 331: 1081-1084.
-
(2011)
Science
, vol.331
, pp. 1081-1084
-
-
Nevo-Dinur, K.1
Nussbaum-Shochat, A.2
Ben-Yehuda, S.3
Amster-Choder, O.4
-
59
-
-
50349088658
-
Investigating intracellular dynamics of FtsZ cytoskeleton with photoactivation single-molecule tracking
-
Niu, L., and Yu, J. (2008) Investigating intracellular dynamics of FtsZ cytoskeleton with photoactivation single-molecule tracking. Biophys J 95: 2009-2016.
-
(2008)
Biophys J
, vol.95
, pp. 2009-2016
-
-
Niu, L.1
Yu, J.2
-
60
-
-
0037378193
-
RNA aptamers to initiation factor 4A helicase hinder cap-dependent translation by blocking ATP hydrolysis
-
Oguro, A., Ohtsu, T., Svitkin, Y.V., Sonenberg, N., and Nakamura, Y. (2003) RNA aptamers to initiation factor 4A helicase hinder cap-dependent translation by blocking ATP hydrolysis. RNA 9: 394-407.
-
(2003)
RNA
, vol.9
, pp. 394-407
-
-
Oguro, A.1
Ohtsu, T.2
Svitkin, Y.V.3
Sonenberg, N.4
Nakamura, Y.5
-
61
-
-
63049113238
-
Protein reconstitution methods for visualizing biomolecular function in living cells
-
Ozawa, T. (2009) Protein reconstitution methods for visualizing biomolecular function in living cells. Yakugaku Zasshi 129: 289-295.
-
(2009)
Yakugaku Zasshi
, vol.129
, pp. 289-295
-
-
Ozawa, T.1
-
62
-
-
34250210525
-
Imaging dynamics of endogenous mitochondrial RNA in single living cells
-
Ozawa, T., Natori, Y., Sato, M., and Umezawa, Y. (2007) Imaging dynamics of endogenous mitochondrial RNA in single living cells. Nat Methods 4: 413-419.
-
(2007)
Nat Methods
, vol.4
, pp. 413-419
-
-
Ozawa, T.1
Natori, Y.2
Sato, M.3
Umezawa, Y.4
-
63
-
-
0036578645
-
Regulation of noise in the expression of a single gene
-
Ozbudak, E.M., Thattai, M., Kurtser, I., Grossman, A.D., and van Oudenaarden, A. (2002) Regulation of noise in the expression of a single gene. Nat Genet 31: 69-73.
-
(2002)
Nat Genet
, vol.31
, pp. 69-73
-
-
Ozbudak, E.M.1
Thattai, M.2
Kurtser, I.3
Grossman, A.D.4
van Oudenaarden, A.5
-
64
-
-
77951699145
-
Superresolution imaging using single-molecule localization
-
Patterson, G., Davidson, M., Manley, S., and Lippincott-Schwartz, J. (2010) Superresolution imaging using single-molecule localization. Annu Rev Phys Chem 61: 345-367.
-
(2010)
Annu Rev Phys Chem
, vol.61
, pp. 345-367
-
-
Patterson, G.1
Davidson, M.2
Manley, S.3
Lippincott-Schwartz, J.4
-
65
-
-
62649145487
-
Fluorescence in situ hybridization for intracellular localization of nifH mRNA
-
Pilhofer, M., Pavlekovic, M., Lee, N.M., Ludwig, W., and Schleifer, K.H. (2009) Fluorescence in situ hybridization for intracellular localization of nifH mRNA. Syst Appl Microbiol 2: 186-192.
-
(2009)
Syst Appl Microbiol
, vol.2
, pp. 186-192
-
-
Pilhofer, M.1
Pavlekovic, M.2
Lee, N.M.3
Ludwig, W.4
Schleifer, K.H.5
-
66
-
-
4444285375
-
Visualization of RNA-protein interactions in living cells: FMRP and IMP1 interact on mRNAs
-
Rackham, O., and Brown, C.M. (2004) Visualization of RNA-protein interactions in living cells: FMRP and IMP1 interact on mRNAs. EMBO J 23: 3346-3355.
-
(2004)
EMBO J
, vol.23
, pp. 3346-3355
-
-
Rackham, O.1
Brown, C.M.2
-
67
-
-
2942718723
-
Control of stochasticity in eukaryotic gene expression
-
Raser, J.M., and O'Shea, E.K. (2004) Control of stochasticity in eukaryotic gene expression. Science 304: 1811-1814.
-
(2004)
Science
, vol.304
, pp. 1811-1814
-
-
Raser, J.M.1
O'Shea, E.K.2
-
68
-
-
0034257926
-
CaMKIIalpha 3' untranslated region-directed mRNA translocation in living neurons: visualization by GFP linkage
-
Rook, M.S., Lu, M., and Kosik, K.S. (2000) CaMKIIalpha 3' untranslated region-directed mRNA translocation in living neurons: visualization by GFP linkage. J Neurosci 20: 6385-6393.
-
(2000)
J Neurosci
, vol.20
, pp. 6385-6393
-
-
Rook, M.S.1
Lu, M.2
Kosik, K.S.3
-
69
-
-
15544371346
-
Gene regulation at the single-cell level
-
Rosenfeld, N., Young, J.W., Alon, U., Swain, P.S., and Elowitz, M.B. (2005) Gene regulation at the single-cell level. Science 307: 1962-1965.
-
(2005)
Science
, vol.307
, pp. 1962-1965
-
-
Rosenfeld, N.1
Young, J.W.2
Alon, U.3
Swain, P.S.4
Elowitz, M.B.5
-
70
-
-
70349490822
-
Subcellular localization of a bacterial regulatory RNA
-
Russell, J.H., and Keiler, K.C. (2009) Subcellular localization of a bacterial regulatory RNA. Proc Natl Acad Sci USA 106: 16405-16409.
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, pp. 16405-16409
-
-
Russell, J.H.1
Keiler, K.C.2
-
71
-
-
33749026335
-
Sub-diffraction-limit imaging by stochastic optical reconstruction microscopy (STORM)
-
Rust, M.J., Bates, M., and Zhuang, X. (2006) Sub-diffraction-limit imaging by stochastic optical reconstruction microscopy (STORM). Nat Methods 3: 793-795.
-
(2006)
Nat Methods
, vol.3
, pp. 793-795
-
-
Rust, M.J.1
Bates, M.2
Zhuang, X.3
-
72
-
-
76149125466
-
In vivo expression and purification of aptamer-tagged small RNA regulators
-
Said, N., Rieder, R., Hurwitz, R., Deckert, J., Urlaub, H., and Vogel, J. (2009) In vivo expression and purification of aptamer-tagged small RNA regulators. Nucleic Acids Res 37: e133.
-
(2009)
Nucleic Acids Res
, vol.37
-
-
Said, N.1
Rieder, R.2
Hurwitz, R.3
Deckert, J.4
Urlaub, H.5
Vogel, J.6
-
73
-
-
10744225575
-
Mechanisms of proinflammatory cytokine-induced biphasic NF-kappa B activation
-
Schmidt, C., Peng, B., Li, Z., Sclabas, G.M., Fujioka, S., Niu, J., etal. (2003) Mechanisms of proinflammatory cytokine-induced biphasic NF-kappa B activation. Mol Cell 12: 1287-1300.
-
(2003)
Mol Cell
, vol.12
, pp. 1287-1300
-
-
Schmidt, C.1
Peng, B.2
Li, Z.3
Sclabas, G.M.4
Fujioka, S.5
Niu, J.6
-
74
-
-
0037315564
-
Global RNA half-life analysis in Escherichia coli reveals positional patterns of transcript degradation
-
Selinger, D.W., Saxena, R.M., Cheung, K.J., Church, G.M., and Rosenow, C. (2003) Global RNA half-life analysis in Escherichia coli reveals positional patterns of transcript degradation. Genome Res 13: 216-223.
-
(2003)
Genome Res
, vol.13
, pp. 216-223
-
-
Selinger, D.W.1
Saxena, R.M.2
Cheung, K.J.3
Church, G.M.4
Rosenow, C.5
-
75
-
-
30944467113
-
A guide to choosing fluorescent proteins
-
Shaner, N.C., Steinbach, P.A., and Tsien, R.Y. (2005) A guide to choosing fluorescent proteins. Nat Methods 2: 905-909.
-
(2005)
Nat Methods
, vol.2
, pp. 905-909
-
-
Shaner, N.C.1
Steinbach, P.A.2
Tsien, R.Y.3
-
76
-
-
2942733310
-
Dynamics of single mRNPs in nuclei of living cells
-
Shav-Tal, Y., Darzacq, X., Shenoy, S.M., Fusco, D., Janicki, S.M., Spector, D.L., and Singer, R.H. (2004) Dynamics of single mRNPs in nuclei of living cells. Science 304: 1797-1800.
-
(2004)
Science
, vol.304
, pp. 1797-1800
-
-
Shav-Tal, Y.1
Darzacq, X.2
Shenoy, S.M.3
Fusco, D.4
Janicki, S.M.5
Spector, D.L.6
Singer, R.H.7
-
77
-
-
0035912805
-
The physiological significance of beta-actin mRNA localization in determining cell polarity and directional motility
-
Shestakova, E.A., Singer, R.H., and Condeelis, J. (2001) The physiological significance of beta-actin mRNA localization in determining cell polarity and directional motility. Proc Natl Acad Sci USA 98: 7045-7050.
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 7045-7050
-
-
Shestakova, E.A.1
Singer, R.H.2
Condeelis, J.3
-
78
-
-
53949107378
-
Fluorescence complementation: an emerging tool for biological research
-
Shyu, Y.J., and Hu, C.D. (2008) Fluorescence complementation: an emerging tool for biological research. Trends Biotechnol 26: 622-630.
-
(2008)
Trends Biotechnol
, vol.26
, pp. 622-630
-
-
Shyu, Y.J.1
Hu, C.D.2
-
79
-
-
0041919397
-
RNA localization: visualization in real-time
-
Singer, R.H. (2003) RNA localization: visualization in real-time. Curr Biol 13: R673-R675.
-
(2003)
Curr Biol
, vol.13
-
-
Singer, R.H.1
-
80
-
-
33645293152
-
An excitable gene regulatory circuit induces transient cellular differentiation
-
Suel, G.M., Garcia-Ojalvo, J., Liberman, L.M., and Elowitz, M.B. (2006) An excitable gene regulatory circuit induces transient cellular differentiation. Nature 440: 545-550.
-
(2006)
Nature
, vol.440
, pp. 545-550
-
-
Suel, G.M.1
Garcia-Ojalvo, J.2
Liberman, L.M.3
Elowitz, M.B.4
-
81
-
-
0036790975
-
Intrinsic and extrinsic contributions to stochasticity in gene expression
-
Swain, P.S., Elowitz, M.B., and Siggia, E.D. (2002) Intrinsic and extrinsic contributions to stochasticity in gene expression. Proc Natl Acad Sci USA 99: 12795-12800.
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 12795-12800
-
-
Swain, P.S.1
Elowitz, M.B.2
Siggia, E.D.3
-
82
-
-
33846818898
-
RNaseE and the other constituents of the RNA degradosome are components of the bacterial cytoskeleton
-
Taghbalout, A., and Rothfield, L. (2007) RNaseE and the other constituents of the RNA degradosome are components of the bacterial cytoskeleton. Proc Natl Acad Sci USA 104: 1667-1672.
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, pp. 1667-1672
-
-
Taghbalout, A.1
Rothfield, L.2
-
83
-
-
46649086171
-
RNaseE and RNA helicase B play central roles in the cytoskeletal organization of the RNA degradosome
-
Taghbalout, A., and Rothfield, L. (2008) RNaseE and RNA helicase B play central roles in the cytoskeletal organization of the RNA degradosome. J Biol Chem 283: 13850-13855.
-
(2008)
J Biol Chem
, vol.283
, pp. 13850-13855
-
-
Taghbalout, A.1
Rothfield, L.2
-
84
-
-
0034625003
-
The myosin motor, Myo4p, binds Ash1 mRNA via the adapter protein, She3p
-
Takizawa, P.A., and Vale, R.D. (2000) The myosin motor, Myo4p, binds Ash1 mRNA via the adapter protein, She3p. Proc Natl Acad Sci USA 97: 5273-5278.
-
(2000)
Proc Natl Acad Sci USA
, vol.97
, pp. 5273-5278
-
-
Takizawa, P.A.1
Vale, R.D.2
-
85
-
-
77955102352
-
Quantifying E. coli proteome and transcriptome with single-molecule sensitivity in single cells
-
Taniguchi, Y., Choi, P.J., Li, G.W., Chen, H., Babu, M., Hearn, J., etal. (2010) Quantifying E. coli proteome and transcriptome with single-molecule sensitivity in single cells. Science 329: 533-538.
-
(2010)
Science
, vol.329
, pp. 533-538
-
-
Taniguchi, Y.1
Choi, P.J.2
Li, G.W.3
Chen, H.4
Babu, M.5
Hearn, J.6
-
86
-
-
34250191761
-
RNA visualization in live bacterial cell using split fluorescent protein approach
-
Valencia-Burton, M.A., McCullough, R.M., Cantor, C.R., and Broude, N.E. (2007) RNA visualization in live bacterial cell using split fluorescent protein approach. Nat Methods 4: 421-427.
-
(2007)
Nat Methods
, vol.4
, pp. 421-427
-
-
Valencia-Burton, M.A.1
McCullough, R.M.2
Cantor, C.R.3
Broude, N.E.4
-
87
-
-
70349515864
-
Spatiotemporal patterns and transcription kinetics of induced RNA in single bacterial cells
-
Valencia-Burton, M., Shah, A., Sutin, J., Borogovac, A., McCullough, R.M., Cantor, C.R., etal. (2009) Spatiotemporal patterns and transcription kinetics of induced RNA in single bacterial cells. Proc Natl Acad Sci USA 106: 16399-16404.
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, pp. 16399-16404
-
-
Valencia-Burton, M.1
Shah, A.2
Sutin, J.3
Borogovac, A.4
McCullough, R.M.5
Cantor, C.R.6
-
88
-
-
70350493966
-
The dynamic nature of the bacterial cytoskeleton
-
Vats, P., Yu, J., and Rothfield, L. (2009) The dynamic nature of the bacterial cytoskeleton. Cell Mol Life Sci 66: 3353-3362.
-
(2009)
Cell Mol Life Sci
, vol.66
, pp. 3353-3362
-
-
Vats, P.1
Yu, J.2
Rothfield, L.3
-
89
-
-
77955715329
-
Robust growth of Escherichia coli
-
Wang, P., Robert, L., Pelletier, J., Dang, W.L., Taddei, F., Wright, A., and Jun, S. (2010) Robust growth of Escherichia coli. Curr Biol 20: 1099-1103.
-
(2010)
Curr Biol
, vol.20
, pp. 1099-1103
-
-
Wang, P.1
Robert, L.2
Pelletier, J.3
Dang, W.L.4
Taddei, F.5
Wright, A.6
Jun, S.7
-
90
-
-
66049157868
-
Quantitative genome-scale analysis of protein localization in an asymmetric bacterium
-
Werner, J.N., Chen, E.Y., Guberman, J.M., Zippilli, A.R., Irgon, J.J., and Gitai, Z. (2009) Quantitative genome-scale analysis of protein localization in an asymmetric bacterium. Proc Natl Acad Sci USA 106: 7858-7863.
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, pp. 7858-7863
-
-
Werner, J.N.1
Chen, E.Y.2
Guberman, J.M.3
Zippilli, A.R.4
Irgon, J.J.5
Gitai, Z.6
-
91
-
-
79955577661
-
RNA detection in live bacterial cells using fluorescent protein complementation triggered by interaction of two RNA aptamers with two RNA-binding peptides
-
doi:10.3390/ph4030494
-
Yiu, H.W., Demidov, V.V., Toran, P., Cantor, C.R., and Broude, N.E. (2011) RNA detection in live bacterial cells using fluorescent protein complementation triggered by interaction of two RNA aptamers with two RNA-binding peptides. Pharmaceuticals 4: 494-508. doi:10.3390/ph4030494
-
(2011)
Pharmaceuticals
, vol.4
, pp. 494-508
-
-
Yiu, H.W.1
Demidov, V.V.2
Toran, P.3
Cantor, C.R.4
Broude, N.E.5
-
92
-
-
33645033645
-
Probing gene expression in live cells, one protein molecule at a time
-
Yu, J., Xiao, J., Ren, X., Lao, K., and Xie, X.S. (2006) Probing gene expression in live cells, one protein molecule at a time. Science 311: 1600-1603.
-
(2006)
Science
, vol.311
, pp. 1600-1603
-
-
Yu, J.1
Xiao, J.2
Ren, X.3
Lao, K.4
Xie, X.S.5
-
93
-
-
50249124582
-
In vivo imaging of oskar mRNA transport reveals the mechanism of posterior localization
-
Zimyanin, V.L., Belaya, K., Pecreaux, J., Gilchrist, M.J., Clark, A., Davis, I., and St Johnston, D. (2008) In vivo imaging of oskar mRNA transport reveals the mechanism of posterior localization. Cell 134: 843-853.
-
(2008)
Cell
, vol.134
, pp. 843-853
-
-
Zimyanin, V.L.1
Belaya, K.2
Pecreaux, J.3
Gilchrist, M.J.4
Clark, A.5
Davis, I.6
St Johnston, D.7
|