Detecting protein-protein interactions with a green fluorescent protein fragment reassembly trap: Scope and mechanism

Journal of the American Chemical Society

Volumn 127, Issue 1, 2005, Pages 146-157

  Magliery, Thomas J ^a   Wilson, Christopher G M ^a   Pan, Weilan ^a   Mishler, Dennis ^a   Ghosh, Indraneel ^a,b   Hamilton, Andrew D ^a   Regan, Lynne ^a  

^a YALE UNIVERSITY   (United States)

^b University of Arizona   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BINDING ENERGY; ENZYME KINETICS; ESCHERICHIA COLI; FLUORESCENCE; POLYPEPTIDES;

COILED COILS; DISSECTED FRAGMENTS; GREEN FLUORESCENT PROTEINS; PROTEIN BINDING PARTNERS;

PROTEINS;

GREEN FLUORESCENT PROTEIN; HYBRID PROTEIN; LEUCINE ZIPPER PROTEIN; PEPTIDE FRAGMENT; PEPTIDE LIBRARY;

ARTICLE; CHEMICAL REACTION KINETICS; ESCHERICHIA COLI; IN VITRO STUDY; LIGAND BINDING; PLASMID; PROTEIN ANALYSIS; PROTEIN ASSEMBLY; PROTEIN BINDING; PROTEIN PROTEIN INTERACTION; PROTEIN STABILITY; PROTEOMICS; REACTION ANALYSIS; TETRATRICOPEPTIDE REPEAT;

AMINO ACID SEQUENCE; BIOPHYSICS; ESCHERICHIA COLI; GREEN FLUORESCENT PROTEINS; KINETICS; LEUCINE ZIPPERS; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; PEPTIDE FRAGMENTS; PLASMIDS; PROTEIN FOLDING; PROTEOMICS; RECOMBINANT FUSION PROTEINS;

EID: 11844252081     PISSN: 00027863     EISSN: None     Source Type: Journal    
DOI: 10.1021/ja046699g     Document Type: Article

References (32)

1. Zhu, H.; Bilgin, M.; Snyder, M. Annu. Rev. Biochem. 2003, 72, 783.
2. Salwinski, L.; Eisenberg, D. Curr. Opin. Struct. Biol. 2003, 13, 377.
3. Puig, O.; Caspary, F.; Rigaut, G.; Rutz, B.; Bouveret, E.; Bragado-Nilsson, E.; Wilm, M.; Seraphin, B. Methods 2001, 24, 218.
4. Fields, S.; Song, O. Nature 1989, 340, 245.
5. Hays, L. B.; Chen, Y. S.; Hu, J. C. Biotechniques 2000, 29, 288.
6. Pelletier, J. N.; Arndt, K. M.; Pluckthun, A.; Michnick, S. W. Nat. Biotechnol. 1999, 17, 683.
7. Johnsson, N.; Varshavsky, A. Proc. Natl. Acad. Sci. U.S.A. 1994, 91, 10340.
8. Zhu, H.; Bilgin, M.; Bangham, R.; Hall, D.; Casamayor, A.; Bertone, P.; Lan, N.; Jansen, R.; Bidlingmaier, S.; Houfek, T.; Mitchell, T.; Miller, P.; Dean, R.; Gerstein, M.; Snyder, M. Science 2001, 293, 2101.
9. Newman, J. R.; Keating, A. E. Science 2003, 300, 2097.
10. Ghosh, I.; Hamilton, A. D.; Regan, L. J. Am. Chem. Soc. 2000, 122, 5658.
11. Tsien, R. Y. Annu. Rev. Biochem. 1998, 67, 509.
12. Hu, C. D.; Chinenov, Y.; Kerppola, T. K. Mol. Cell 2002, 9, 789.
13. Hu, C. D.; Kerppola, T. K. Nat. Biotechnol. 2003, 21, 539.
14. Munson, M.; Predki, P. F.; Regan, L. Gene 1994, 144, 59.
15. Alber, T. Curr. Opin. Genet. Dev. 1992, 2, 205.
16. Adamson, J. G.; Zhou, N. E.; Hodges, R. S. Curr. Opin. Biotechnol. 1993, 4, 428.
17. Lupas, A. Trends Biochem. Sci. 1996, 21, 375.
18. Oakley, M. G.; Kim, P. S. Biochemistry 1998, 37, 12603.
19. Oakley, M. G.; Hollenbeck, J. J. Curr. Opin. Struct. Biol. 2001, 11, 450.
20. McClain, D. L.; Binfet, J. P.; Oakley, M. G. J. Mol. Biol. 2001, 313, 371.
21. D'Andrea, L.; Regan, L. Trends Biochem. Sci. 2003, 28, 655.
22. Scheufler, C.; Brinker, A.; Bourenkov, G.; Pegoraro, S.; Moroder, L.; Bartunik, H.; Hartl, F. U.; Moarefi, I. Cell 2000, 101, 199.
23. Brinker, A.; Scheufler, C.; Von Der Mulbe, F.; Fleckenstein, B.; Herrmann, C.; Jung, G.; Moarefi, I.; Hartl, F. U. J. Biol. Chem. 2002, 277, 19265.
24. Fersht, A. Structure and Mechanism in Protein Science: A Guide to Enzyme Catalysis and Protein Folding; W. H. Freeman & Co.: New York, 1999.
25. Crameri, A.; Whitehorn, E. A.; Tate, E.; Stemmer, W. P. Nat. Biotechnol. 1996, 14, 315.
26. Arndt, K. M.; Pelletier, J. N.; Muller, K. M.; Alber, T.; Michnick, S. W.; Pluckthun, A. J. Mol. Biol. 2000, 295, 627.
27. Oshea, E. K.; Lumb, K. J.; Kim, P. S. Curr. Biol. 1993, 3, 658.
28. Kohn, W. D.; Kay, C. M.; Hodges, R. S. J. Mol. Biol. 1998, 283, 993.
29. Zhou, N. E.; Kay, C. M.; Hodges, R. S. Protein Eng. 1994, 7, 1365.
30. Krylov, D.; Mikhailenko, I.; Vinson, C. EMBO J. 1994, 13, 2849.
31. Remy, I.; Michnick, S. W. Methods 2004, 32, 381.
32. Waldo, G. S.; Standish, B. M.; Berendzen, J.; Terwilliger, T. C. Nat. Biotechnol. 1999, 17, 691.