-
1
-
-
15544369658
-
Host-bacterial mutualism in the human intestine
-
Backhed F., et al. Host-bacterial mutualism in the human intestine. Science 2005, 307:1915-1920.
-
(2005)
Science
, vol.307
, pp. 1915-1920
-
-
Backhed, F.1
-
2
-
-
71949112397
-
Inflammatory bowel disease, gut bacteria and probiotic therapy
-
Reiff C., Kelly D. Inflammatory bowel disease, gut bacteria and probiotic therapy. Int. J. Med. Microbiol. 2010, 300:25-33.
-
(2010)
Int. J. Med. Microbiol.
, vol.300
, pp. 25-33
-
-
Reiff, C.1
Kelly, D.2
-
3
-
-
33748329408
-
Review article: the role of bacteria in onset and perpetuation of inflammatory bowel disease
-
Seksik P., et al. Review article: the role of bacteria in onset and perpetuation of inflammatory bowel disease. Aliment. Pharmacol. Ther. 2006, 24(Suppl. 3):11-18.
-
(2006)
Aliment. Pharmacol. Ther.
, vol.24
, Issue.SUPPL.
, pp. 11-18
-
-
Seksik, P.1
-
4
-
-
33845901507
-
Microbial ecology: human gut microbes associated with obesity
-
Ley R.E., et al. Microbial ecology: human gut microbes associated with obesity. Nature 2006, 444:1022-1023.
-
(2006)
Nature
, vol.444
, pp. 1022-1023
-
-
Ley, R.E.1
-
5
-
-
74249119678
-
Obesity and the human microbiome
-
Ley R.E. Obesity and the human microbiome. Curr. Opin. Gastroenterol. 2010, 26:5-11.
-
(2010)
Curr. Opin. Gastroenterol.
, vol.26
, pp. 5-11
-
-
Ley, R.E.1
-
6
-
-
73949137604
-
Microbiota and SCFA in lean and overweight healthy subjects
-
Schwiertz A., et al. Microbiota and SCFA in lean and overweight healthy subjects. Obesity (Silver Spring) 2010, 18:190-195.
-
(2010)
Obesity (Silver Spring)
, vol.18
, pp. 190-195
-
-
Schwiertz, A.1
-
7
-
-
23344442120
-
Obesity alters gut microbial ecology
-
Ley R.E., et al. Obesity alters gut microbial ecology. Proc. Natl. Acad. Sci. U.S.A. 2005, 102:11070-11075.
-
(2005)
Proc. Natl. Acad. Sci. U.S.A.
, vol.102
, pp. 11070-11075
-
-
Ley, R.E.1
-
8
-
-
33845874101
-
An obesity-associated gut microbiome with increased capacity for energy harvest
-
Turnbaugh P.J., et al. An obesity-associated gut microbiome with increased capacity for energy harvest. Nature 2006, 444:1027-1031.
-
(2006)
Nature
, vol.444
, pp. 1027-1031
-
-
Turnbaugh, P.J.1
-
9
-
-
77950251400
-
A human gut microbial gene catalogue established by metagenomic sequencing
-
Qin J., et al. A human gut microbial gene catalogue established by metagenomic sequencing. Nature 2010, 464:59-65.
-
(2010)
Nature
, vol.464
, pp. 59-65
-
-
Qin, J.1
-
10
-
-
58549089276
-
Shotgun metaproteomics of the human distal gut microbiota
-
Verberkmoes N.C., et al. Shotgun metaproteomics of the human distal gut microbiota. ISME J. 2009, 3:179-189.
-
(2009)
ISME J.
, vol.3
, pp. 179-189
-
-
Verberkmoes, N.C.1
-
11
-
-
41149099000
-
Symbiotic gut microbes modulate human metabolic phenotypes
-
Li M., et al. Symbiotic gut microbes modulate human metabolic phenotypes. Proc. Natl. Acad. Sci. U.S.A. 2008, 105:2117-2122.
-
(2008)
Proc. Natl. Acad. Sci. U.S.A.
, vol.105
, pp. 2117-2122
-
-
Li, M.1
-
12
-
-
77952158672
-
Organismal, genetic, and transcriptional variation in the deeply sequenced gut microbiomes of identical twins
-
Turnbaugh P.J., et al. Organismal, genetic, and transcriptional variation in the deeply sequenced gut microbiomes of identical twins. Proc. Natl. Acad. Sci. U.S.A. 2010, 107:7503-7508.
-
(2010)
Proc. Natl. Acad. Sci. U.S.A.
, vol.107
, pp. 7503-7508
-
-
Turnbaugh, P.J.1
-
13
-
-
33744804299
-
Metagenomic analysis of the human distal gut microbiome
-
Gill S.R., et al. Metagenomic analysis of the human distal gut microbiome. Science 2006, 312:1355-1359.
-
(2006)
Science
, vol.312
, pp. 1355-1359
-
-
Gill, S.R.1
-
14
-
-
38449088143
-
Comparative metagenomics revealed commonly enriched gene sets in human gut microbiomes
-
Kurokawa K., et al. Comparative metagenomics revealed commonly enriched gene sets in human gut microbiomes. DNA Res. 2007, 14:169-181.
-
(2007)
DNA Res.
, vol.14
, pp. 169-181
-
-
Kurokawa, K.1
-
15
-
-
58749112734
-
A core gut microbiome in obese and lean twins
-
Turnbaugh P.J., et al. A core gut microbiome in obese and lean twins. Nature 2009, 457:480-484.
-
(2009)
Nature
, vol.457
, pp. 480-484
-
-
Turnbaugh, P.J.1
-
16
-
-
53649106195
-
Next-generation DNA sequencing
-
Shendure J., Ji H. Next-generation DNA sequencing. Nat. Biotechnol. 2008, 26:1135-1145.
-
(2008)
Nat. Biotechnol.
, vol.26
, pp. 1135-1145
-
-
Shendure, J.1
Ji, H.2
-
17
-
-
67650685282
-
More than 9,000,000 unique genes in human gut bacterial community: estimating gene numbers inside a human body
-
Yang X., et al. More than 9,000,000 unique genes in human gut bacterial community: estimating gene numbers inside a human body. PLoS ONE 2009, 4:e6074.
-
(2009)
PLoS ONE
, vol.4
-
-
Yang, X.1
-
18
-
-
77953050946
-
A catalog of reference genomes from the human microbiome
-
Nelson K.E., et al. A catalog of reference genomes from the human microbiome. Science 2010, 328:994-999.
-
(2010)
Science
, vol.328
, pp. 994-999
-
-
Nelson, K.E.1
-
19
-
-
0036024611
-
Phylogenetic analysis of the human gut microbiota using 16S rDNA clone libraries and strictly anaerobic culture-based methods
-
Hayashi H., et al. Phylogenetic analysis of the human gut microbiota using 16S rDNA clone libraries and strictly anaerobic culture-based methods. Microbiol. Immunol. 2002, 46:535-548.
-
(2002)
Microbiol. Immunol.
, vol.46
, pp. 535-548
-
-
Hayashi, H.1
-
20
-
-
34547540925
-
Dissecting biological " dark matter" with single-cell genetic analysis of rare and uncultivated TM7 microbes from the human mouth
-
Marcy Y., et al. Dissecting biological " dark matter" with single-cell genetic analysis of rare and uncultivated TM7 microbes from the human mouth. Proc. Natl. Acad. Sci. U.S.A. 2007, 104:11889-11894.
-
(2007)
Proc. Natl. Acad. Sci. U.S.A.
, vol.104
, pp. 11889-11894
-
-
Marcy, Y.1
-
21
-
-
65449134335
-
Assembling the marine metagenome, one cell at a time
-
Woyke T., et al. Assembling the marine metagenome, one cell at a time. PLoS ONE 2009, 4:e5299.
-
(2009)
PLoS ONE
, vol.4
-
-
Woyke, T.1
-
22
-
-
77954577597
-
Mechanisms of microbial hydrogen disposal in the human colon and implications for health and disease
-
Nakamura N., et al. Mechanisms of microbial hydrogen disposal in the human colon and implications for health and disease. Annu. Rev. Food Sci. Technol. 2010, 1:363-395.
-
(2010)
Annu. Rev. Food Sci. Technol.
, vol.1
, pp. 363-395
-
-
Nakamura, N.1
-
23
-
-
0025736905
-
Interaction between colonic acetate and propionate in humans
-
Wolever T., et al. Interaction between colonic acetate and propionate in humans. Am. J. Clin. Nutr. 1991, 53:681-687.
-
(1991)
Am. J. Clin. Nutr.
, vol.53
, pp. 681-687
-
-
Wolever, T.1
-
24
-
-
0024439382
-
Effect of rectal infusion of short chain fatty acids in human subjects
-
Wolever T.M., et al. Effect of rectal infusion of short chain fatty acids in human subjects. Am. J. Gastroenterol. 1989, 84:1027-1033.
-
(1989)
Am. J. Gastroenterol.
, vol.84
, pp. 1027-1033
-
-
Wolever, T.M.1
-
25
-
-
0034959553
-
Short-chain fatty acids and human colonic function: roles of resistant starch and nonstarch polysaccharides
-
Topping D.L., Clifton P.M. Short-chain fatty acids and human colonic function: roles of resistant starch and nonstarch polysaccharides. Physiol. Rev. 2001, 81:1031-1064.
-
(2001)
Physiol. Rev.
, vol.81
, pp. 1031-1064
-
-
Topping, D.L.1
Clifton, P.M.2
-
26
-
-
77949538579
-
Butyrate utilization by the colonic mucosa in inflammatory bowel diseases: a transport deficiency
-
Thibault R., et al. Butyrate utilization by the colonic mucosa in inflammatory bowel diseases: a transport deficiency. Inflamm. Bowel Dis. 2010, 16:684-695.
-
(2010)
Inflamm. Bowel Dis.
, vol.16
, pp. 684-695
-
-
Thibault, R.1
-
27
-
-
36549003678
-
Down-regulation of the monocarboxylate transporter 1 is involved in butyrate deficiency during intestinal inflammation
-
Thibault R., et al. Down-regulation of the monocarboxylate transporter 1 is involved in butyrate deficiency during intestinal inflammation. Gastroenterology 2007, 133:1916-1927.
-
(2007)
Gastroenterology
, vol.133
, pp. 1916-1927
-
-
Thibault, R.1
-
28
-
-
37149022209
-
Review article: the role of butyrate on colonic function
-
Hamer H.M., et al. Review article: the role of butyrate on colonic function. Aliment. Pharmacol. Ther. 2008, 27:104-119.
-
(2008)
Aliment. Pharmacol. Ther.
, vol.27
, pp. 104-119
-
-
Hamer, H.M.1
-
29
-
-
0038491435
-
Functional characterization of human receptors for short chain fatty acids and their role in polymorphonuclear cell activation
-
Le Poul E., et al. Functional characterization of human receptors for short chain fatty acids and their role in polymorphonuclear cell activation. J. Biol. Chem. 2003, 278:25481-25489.
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 25481-25489
-
-
Le Poul, E.1
-
30
-
-
0038363378
-
The Orphan G protein-coupled receptors GPR41 and GPR43 are activated by propionate and other short chain carboxylic acids
-
Brown A.J., et al. The Orphan G protein-coupled receptors GPR41 and GPR43 are activated by propionate and other short chain carboxylic acids. J. Biol. Chem. 2003, 278:11312-11319.
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 11312-11319
-
-
Brown, A.J.1
-
31
-
-
0742305675
-
Short-chain fatty acids stimulate leptin production in adipocytes through the G protein-coupled receptor GPR41
-
Xiong Y., et al. Short-chain fatty acids stimulate leptin production in adipocytes through the G protein-coupled receptor GPR41. Proc. Natl. Acad. Sci. U.S.A. 2004, 101:1045-1050.
-
(2004)
Proc. Natl. Acad. Sci. U.S.A.
, vol.101
, pp. 1045-1050
-
-
Xiong, Y.1
-
32
-
-
55949091259
-
Effects of the gut microbiota on host adiposity are modulated by the short-chain fatty-acid binding G protein-coupled receptor, Gpr41
-
Samuel B.S., et al. Effects of the gut microbiota on host adiposity are modulated by the short-chain fatty-acid binding G protein-coupled receptor, Gpr41. Proc. Natl. Acad. Sci. U.S.A. 2008, 105:16767-16772.
-
(2008)
Proc. Natl. Acad. Sci. U.S.A.
, vol.105
, pp. 16767-16772
-
-
Samuel, B.S.1
-
33
-
-
70350666634
-
Regulation of inflammatory responses by gut microbiota and chemoattractant receptor GPR43
-
Maslowski K.M., et al. Regulation of inflammatory responses by gut microbiota and chemoattractant receptor GPR43. Nature 2009, 461:1282-1286.
-
(2009)
Nature
, vol.461
, pp. 1282-1286
-
-
Maslowski, K.M.1
-
34
-
-
77950250064
-
Metabolic syndrome and altered gut microbiota in mice lacking Toll-like receptor 5
-
Vijay-Kumar M., et al. Metabolic syndrome and altered gut microbiota in mice lacking Toll-like receptor 5. Science 2010, 328:228-231.
-
(2010)
Science
, vol.328
, pp. 228-231
-
-
Vijay-Kumar, M.1
-
35
-
-
73149122136
-
Applications of genome-scale metabolic reconstructions
-
Article no. 320
-
Oberhardt M.A., et al. Applications of genome-scale metabolic reconstructions. Mol. Syst. Biol. 2009, 5. Article no. 320.
-
(2009)
Mol. Syst. Biol.
, vol.5
-
-
Oberhardt, M.A.1
-
36
-
-
34447317247
-
Investigating the metabolic capabilities of Mycobacterium tuberculosis H37Rv using the in silico strain iNJ661 and proposing alternative drug targets
-
Article no. 26
-
Jamshidi N., Palsson B.O. Investigating the metabolic capabilities of Mycobacterium tuberculosis H37Rv using the in silico strain iNJ661 and proposing alternative drug targets. BMC Syst. Biol. 2007, 1. Article no. 26.
-
(2007)
BMC Syst. Biol.
, vol.1
-
-
Jamshidi, N.1
Palsson, B.O.2
-
37
-
-
33846910173
-
Global reconstruction of the human metabolic network based on genomic and bibliomic data
-
Duarte N.C., et al. Global reconstruction of the human metabolic network based on genomic and bibliomic data. Proc. Natl. Acad. Sci. U.S.A. 2007, 104:1777-1782.
-
(2007)
Proc. Natl. Acad. Sci. U.S.A.
, vol.104
, pp. 1777-1782
-
-
Duarte, N.C.1
-
38
-
-
34548860112
-
The Edinburgh human metabolic network reconstruction and its functional analysis
-
Article no. 135
-
Ma H., et al. The Edinburgh human metabolic network reconstruction and its functional analysis. Mol. Syst. Biol. 2007, 3. Article no. 135.
-
(2007)
Mol. Syst. Biol.
, vol.3
-
-
Ma, H.1
-
39
-
-
77956417789
-
Computational reconstruction of tissue-specific metabolic models: application to human liver metabolism
-
Article no. 401
-
Jerby L., et al. Computational reconstruction of tissue-specific metabolic models: application to human liver metabolism. Mol. Syst. Biol. 2010, 6. Article no. 401.
-
(2010)
Mol. Syst. Biol.
, vol.6
-
-
Jerby, L.1
-
40
-
-
77958537509
-
Insight into human alveolar macrophage and M. tuberculosis interactions via metabolic reconstructions
-
Article no. 422
-
Bordbar A., et al. Insight into human alveolar macrophage and M. tuberculosis interactions via metabolic reconstructions. Mol. Syst. Biol. 2010, 6. Article no. 422.
-
(2010)
Mol. Syst. Biol.
, vol.6
-
-
Bordbar, A.1
-
41
-
-
58549108388
-
Reconstruction of biochemical networks in microorganisms
-
Feist A.M., et al. Reconstruction of biochemical networks in microorganisms. Nat. Rev. Microbiol. 2009, 7:129-143.
-
(2009)
Nat. Rev. Microbiol.
, vol.7
, pp. 129-143
-
-
Feist, A.M.1
-
42
-
-
75149129569
-
A protocol for generating a high-quality genome-scale metabolic reconstruction
-
Thiele I., Palsson B.O. A protocol for generating a high-quality genome-scale metabolic reconstruction. Nat. Protoc. 2010, 5:93-121.
-
(2010)
Nat. Protoc.
, vol.5
, pp. 93-121
-
-
Thiele, I.1
Palsson, B.O.2
-
43
-
-
77956696072
-
High-throughput generation, optimization and analysis of genome-scale metabolic models
-
Henry C.S., et al. High-throughput generation, optimization and analysis of genome-scale metabolic models. Nat. Biotechnol. 2010, 28:977-982.
-
(2010)
Nat. Biotechnol.
, vol.28
, pp. 977-982
-
-
Henry, C.S.1
-
44
-
-
65249149643
-
Characterizing a model human gut microbiota composed of members of its two dominant bacterial phyla
-
Mahowald M.A., et al. Characterizing a model human gut microbiota composed of members of its two dominant bacterial phyla. Proc. Natl. Acad. Sci. U.S.A. 2009, 106:5859-5864.
-
(2009)
Proc. Natl. Acad. Sci. U.S.A.
, vol.106
, pp. 5859-5864
-
-
Mahowald, M.A.1
-
45
-
-
33745610880
-
A humanized gnotobiotic mouse model of host-archaeal-bacterial mutualism
-
Samuel B.S., Gordon J.I. A humanized gnotobiotic mouse model of host-archaeal-bacterial mutualism. Proc. Natl. Acad. Sci. U.S.A. 2006, 103:10011-10016.
-
(2006)
Proc. Natl. Acad. Sci. U.S.A.
, vol.103
, pp. 10011-10016
-
-
Samuel, B.S.1
Gordon, J.I.2
-
46
-
-
0037156959
-
Molecular changes in the expression of human colonic nutrient transporters during the transition from normality to malignancy
-
Lambert D.W., et al. Molecular changes in the expression of human colonic nutrient transporters during the transition from normality to malignancy. Brain J. Cancer 2002, 86:1262-1269.
-
(2002)
Brain J. Cancer
, vol.86
, pp. 1262-1269
-
-
Lambert, D.W.1
-
47
-
-
33947276100
-
Metabolic modeling of a mutualistic microbial community
-
Article no. 92
-
Stolyar S., et al. Metabolic modeling of a mutualistic microbial community. Mol. Syst. Biol. 2007, 3. Article no. 92.
-
(2007)
Mol. Syst. Biol.
, vol.3
-
-
Stolyar, S.1
-
48
-
-
77956649528
-
Metabolic reconstruction, constraint-based analysis and game theory to probe genome-scale metabolic networks
-
Ruppin E., et al. Metabolic reconstruction, constraint-based analysis and game theory to probe genome-scale metabolic networks. Curr. Opin. Biotechnol. 2010, 21:502-510.
-
(2010)
Curr. Opin. Biotechnol.
, vol.21
, pp. 502-510
-
-
Ruppin, E.1
-
49
-
-
77954336201
-
Mathematical modelling of carbohydrate degradation by human colonic microbiota
-
Munoz-Tamayo R., et al. Mathematical modelling of carbohydrate degradation by human colonic microbiota. J. Theor. Biol. 2010, 266:189-201.
-
(2010)
J. Theor. Biol.
, vol.266
, pp. 189-201
-
-
Munoz-Tamayo, R.1
-
50
-
-
0036708443
-
Dynamic flux balance analysis of diauxic growth in Escherichia coli
-
Mahadevan R., et al. Dynamic flux balance analysis of diauxic growth in Escherichia coli. Biophys. J. 2002, 83:1331-1340.
-
(2002)
Biophys. J.
, vol.83
, pp. 1331-1340
-
-
Mahadevan, R.1
-
51
-
-
14544268137
-
Uncovering transcriptional regulation of metabolism by using metabolic network topology
-
Patil K.R., Nielsen J. Uncovering transcriptional regulation of metabolism by using metabolic network topology. Proc. Natl. Acad. Sci. U.S.A. 2005, 102:2685-2689.
-
(2005)
Proc. Natl. Acad. Sci. U.S.A.
, vol.102
, pp. 2685-2689
-
-
Patil, K.R.1
Nielsen, J.2
-
52
-
-
33750705293
-
Integration of metabolome data with metabolic networks reveals reporter reactions
-
Article no. 50
-
Cakir T., et al. Integration of metabolome data with metabolic networks reveals reporter reactions. Mol. Syst. Biol. 2006, 2. Article no. 50.
-
(2006)
Mol. Syst. Biol.
, vol.2
-
-
Cakir, T.1
-
53
-
-
33745463739
-
A comprehensive map of the toll-like receptor signaling network
-
Article no. 0015
-
Oda K., Kitano H. A comprehensive map of the toll-like receptor signaling network. Mol. Syst. Biol. 2006, 2. Article no. 0015.
-
(2006)
Mol. Syst. Biol.
, vol.2
-
-
Oda, K.1
Kitano, H.2
-
54
-
-
2342648924
-
Integrating high-throughput and computational data elucidates bacterial networks
-
Covert M.W., et al. Integrating high-throughput and computational data elucidates bacterial networks. Nature 2004, 429:92-96.
-
(2004)
Nature
, vol.429
, pp. 92-96
-
-
Covert, M.W.1
-
55
-
-
34447636258
-
Modeling Neisseria meningitidis metabolism: from genome to metabolic fluxes
-
Article no. R136
-
Baart G.J., et al. Modeling Neisseria meningitidis metabolism: from genome to metabolic fluxes. Genome Biol. 2007, 8. Article no. R136.
-
(2007)
Genome Biol.
, vol.8
-
-
Baart, G.J.1
-
56
-
-
58149505597
-
Metabolic network model of a human oral pathogen
-
Mazumdar V., et al. Metabolic network model of a human oral pathogen. J. Bacteriol. 2009, 191:74-90.
-
(2009)
J. Bacteriol.
, vol.191
, pp. 74-90
-
-
Mazumdar, V.1
-
57
-
-
41149163825
-
Genome-scale metabolic network analysis of the opportunistic pathogen Pseudomonas aeruginosa PAO1
-
Oberhardt M.A., et al. Genome-scale metabolic network analysis of the opportunistic pathogen Pseudomonas aeruginosa PAO1. J. Bacteriol. 2008, 190:2790-2803.
-
(2008)
J. Bacteriol.
, vol.190
, pp. 2790-2803
-
-
Oberhardt, M.A.1
-
58
-
-
62949176320
-
Genome-scale reconstruction of the metabolic network in Yersinia pestis, strain 91001
-
Navid A., Almaas E. Genome-scale reconstruction of the metabolic network in Yersinia pestis, strain 91001. Mol. Biosyst. 2009, 5:368-375.
-
(2009)
Mol. Biosyst.
, vol.5
, pp. 368-375
-
-
Navid, A.1
Almaas, E.2
-
59
-
-
17844405878
-
Genome-scale reconstruction of the metabolic network in Staphylococcus aureus N315: an initial draft to the two-dimensional annotation
-
Article no. 8
-
Becker S.A., Palsson B.O. Genome-scale reconstruction of the metabolic network in Staphylococcus aureus N315: an initial draft to the two-dimensional annotation. BMC Microbiol. 2005, 5. Article no. 8.
-
(2005)
BMC Microbiol.
, vol.5
-
-
Becker, S.A.1
Palsson, B.O.2
-
60
-
-
23644452487
-
Expanded metabolic reconstruction of Helicobacter pylori (iIT341 GSM/GPR): an in silico genome-scale characterization of single- and double-deletion mutants
-
Thiele I., et al. Expanded metabolic reconstruction of Helicobacter pylori (iIT341 GSM/GPR): an in silico genome-scale characterization of single- and double-deletion mutants. J. Bacteriol. 2005, 187:5818-5830.
-
(2005)
J. Bacteriol.
, vol.187
, pp. 5818-5830
-
-
Thiele, I.1
-
61
-
-
61449115916
-
A genome-scale metabolic reconstruction of Mycoplasma genitalium, iPS189
-
Suthers P.F., et al. A genome-scale metabolic reconstruction of Mycoplasma genitalium, iPS189. PLoS Comput. Biol. 2009, 5:e1000285.
-
(2009)
PLoS Comput. Biol.
, vol.5
-
-
Suthers, P.F.1
-
62
-
-
33846015888
-
Analysis of growth of Lactobacillus plantarum WCFS1 on a complex medium using a genome-scale metabolic model
-
Teusink B., et al. Analysis of growth of Lactobacillus plantarum WCFS1 on a complex medium using a genome-scale metabolic model. J. Biol. Chem. 2006, 281:40041-40048.
-
(2006)
J. Biol. Chem.
, vol.281
, pp. 40041-40048
-
-
Teusink, B.1
-
63
-
-
70449449392
-
Genome scale reconstruction of a Salmonella metabolic model: comparison of similarity and differences with a commensal Escherichia coli strain
-
AbuOun M., et al. Genome scale reconstruction of a Salmonella metabolic model: comparison of similarity and differences with a commensal Escherichia coli strain. J. Biol. Chem. 2009, 284:29480-29488.
-
(2009)
J. Biol. Chem.
, vol.284
, pp. 29480-29488
-
-
AbuOun, M.1
-
64
-
-
77956419824
-
Reconstruction and flux-balance analysis of the Plasmodium falciparum metabolic network
-
Article no. 408
-
Plata G., et al. Reconstruction and flux-balance analysis of the Plasmodium falciparum metabolic network. Mol. Syst. Biol. 2010, 6. Article no. 408.
-
(2010)
Mol. Syst. Biol.
, vol.6
-
-
Plata, G.1
-
65
-
-
77956407882
-
HepatoNet1: a comprehensive metabolic reconstruction of the human hepatocyte for the analysis of liver physiology
-
Article no. 411
-
Gille C., et al. HepatoNet1: a comprehensive metabolic reconstruction of the human hepatocyte for the analysis of liver physiology. Mol. Syst. Biol. 2010, 6. Article no. 411.
-
(2010)
Mol. Syst. Biol.
, vol.6
-
-
Gille, C.1
-
66
-
-
78649887273
-
Composition and energy harvesting capacity of the gut microbiota: relationship to diet, obesity and time in mouse models
-
Murphy E.F., et al. Composition and energy harvesting capacity of the gut microbiota: relationship to diet, obesity and time in mouse models. Gut 2010, 59:1635-1642.
-
(2010)
Gut
, vol.59
, pp. 1635-1642
-
-
Murphy, E.F.1
-
67
-
-
56549122798
-
Human colonic microbiota associated with diet, obesity and weight loss
-
Duncan S.H., et al. Human colonic microbiota associated with diet, obesity and weight loss. Int. J. Obes. (Lond.) 2008, 32:1720-1724.
-
(2008)
Int. J. Obes. (Lond.)
, vol.32
, pp. 1720-1724
-
-
Duncan, S.H.1
-
68
-
-
34547602916
-
Loss-of-function mutation in Toll-like receptor 4 prevents diet-induced obesity and insulin resistance
-
Tsukumo D.M., et al. Loss-of-function mutation in Toll-like receptor 4 prevents diet-induced obesity and insulin resistance. Diabetes 2007, 56:1986-1998.
-
(2007)
Diabetes
, vol.56
, pp. 1986-1998
-
-
Tsukumo, D.M.1
-
69
-
-
33846542071
-
Mechanisms underlying the resistance to diet-induced obesity in germ-free mice
-
Backhed F., et al. Mechanisms underlying the resistance to diet-induced obesity in germ-free mice. Proc. Natl. Acad. Sci. U.S.A. 2007, 104:979-984.
-
(2007)
Proc. Natl. Acad. Sci. U.S.A.
, vol.104
, pp. 979-984
-
-
Backhed, F.1
-
70
-
-
35348857386
-
Molecular-phylogenetic characterization of microbial community imbalances in human inflammatory bowel diseases
-
Frank D.N., et al. Molecular-phylogenetic characterization of microbial community imbalances in human inflammatory bowel diseases. Proc. Natl. Acad. Sci. U.S.A. 2007, 104:13780-13785.
-
(2007)
Proc. Natl. Acad. Sci. U.S.A.
, vol.104
, pp. 13780-13785
-
-
Frank, D.N.1
-
71
-
-
30944466824
-
Reduced diversity of faecal microbiota in Crohn's disease revealed by a metagenomic approach
-
Manichanh C., et al. Reduced diversity of faecal microbiota in Crohn's disease revealed by a metagenomic approach. Gut 2006, 55:205-211.
-
(2006)
Gut
, vol.55
, pp. 205-211
-
-
Manichanh, C.1
-
72
-
-
70349488325
-
Low counts of Faecalibacterium prausnitzii in colitis microbiota
-
Sokol H., et al. Low counts of Faecalibacterium prausnitzii in colitis microbiota. Inflamm. Bowel Dis. 2009, 15:1183-1189.
-
(2009)
Inflamm. Bowel Dis.
, vol.15
, pp. 1183-1189
-
-
Sokol, H.1
-
73
-
-
0033860601
-
Oral bacteriotherapy as maintenance treatment in patients with chronic pouchitis: a double-blind, placebo-controlled trial
-
Gionchetti P., et al. Oral bacteriotherapy as maintenance treatment in patients with chronic pouchitis: a double-blind, placebo-controlled trial. Gastroenterology 2000, 119:305-309.
-
(2000)
Gastroenterology
, vol.119
, pp. 305-309
-
-
Gionchetti, P.1
-
74
-
-
9144254035
-
Once daily high dose probiotic therapy (VSL#3) for maintaining remission in recurrent or refractory pouchitis
-
Mimura T., et al. Once daily high dose probiotic therapy (VSL#3) for maintaining remission in recurrent or refractory pouchitis. Gut 2004, 53:108-114.
-
(2004)
Gut
, vol.53
, pp. 108-114
-
-
Mimura, T.1
|