-
2
-
-
17044383380
-
Epidemiology of tuberculosis in the United States
-
v. 10.1016/j.ccm.2005.02.007 15837104
-
Schneider E Moore M Castro KG Epidemiology of tuberculosis in the United States Clinics in chest medicine 2005 26 183-195 v. 10.1016/ j.ccm.2005.02.007 15837104
-
(2005)
Clinics in Chest Medicine
, vol.26
, pp. 183-195
-
-
Schneider, E.1
Moore, M.2
Castro, K.G.3
-
3
-
-
0035913260
-
Management of tuberculosis in the United States
-
10.1056/NEJM200107193450307 11463015
-
Small PM Fujiwara PI Management of tuberculosis in the United States The New England journal of medicine 2001 345 3 189-200 10.1056/ NEJM200107193450307 11463015
-
(2001)
The New England Journal of Medicine
, vol.345
, Issue.3
, pp. 189-200
-
-
Small, P.M.1
Fujiwara, P.I.2
-
4
-
-
33746342137
-
Multidrug-resistant tuberculosis: A menace that threatens to destabilize tuberculosis control
-
10.1378/chest.130.1.261 16840411
-
Sharma SK Mohan A Multidrug-resistant tuberculosis: A menace that threatens to destabilize tuberculosis control Chest 2006 130 1 261-272 10.1378/chest.130.1.261 16840411
-
(2006)
Chest
, vol.130
, Issue.1
, pp. 261-272
-
-
Sharma, S.K.1
Mohan, A.2
-
5
-
-
0034780485
-
Nonreplicating persistence of mycobacterium tuberculosis
-
10.1146/annurev.micro.55.1.139 11544352
-
Wayne LG Sohaskey CD Nonreplicating persistence of mycobacterium tuberculosis Annual review of microbiology 2001 55 139-163 10.1146/ annurev.micro.55.1.139 11544352
-
(2001)
Annual Review of Microbiology
, vol.55
, pp. 139-163
-
-
Wayne, L.G.1
Sohaskey, C.D.2
-
6
-
-
0032508046
-
Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence
-
10.1038/31159 9634230
-
Cole ST Brosch R Parkhill J Garnier T Churcher C Harris D Gordon SV Eiglmeier K Gas S Barry CE 3rd Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence Nature 1998 393 6685 537-544 10.1038/31159 9634230
-
(1998)
Nature
, vol.393
, Issue.6685
, pp. 537-544
-
-
Cole, S.T.1
Brosch, R.2
Parkhill, J.3
Garnier, T.4
Churcher, C.5
Harris, D.6
Gordon, S.V.7
Eiglmeier, K.8
Gas, S.9
Barry III, C.E.10
-
7
-
-
17844405878
-
Genome-scale reconstruction of the metabolic network in Staphylococcus aureus N315: An initial draft to the two-dimensional annotation
-
10.1186/1471-2180-5-8
-
Becker SA Palsson BO Genome-scale reconstruction of the metabolic network in Staphylococcus aureus N315: An initial draft to the two-dimensional annotation BMC microbiology [electronic resource] 2005 5 1 8 10.1186/1471-2180-5-8
-
(2005)
BMC Microbiology [Electronic Resource]
, vol.5
, Issue.1
, pp. 8
-
-
Becker, S.A.1
Palsson, B.O.2
-
10
-
-
0020661317
-
Comparative study of the lipid composition of particular pathogenic and nonpathogenic species of Mycobacterium
-
6402600
-
Nandedkar AK Comparative study of the lipid composition of particular pathogenic and nonpathogenic species of Mycobacterium Journal of the National Medical Association 1983 75 1 69-74 6402600
-
(1983)
Journal of the National Medical Association
, vol.75
, Issue.1
, pp. 69-74
-
-
Nandedkar, A.K.1
-
11
-
-
0034924433
-
Separation and characterization of individual mycolic acids in representative mycobacteria
-
11429460
-
Watanabe M Aoyagi Y Ridell M Minnikin DE Separation and characterization of individual mycolic acids in representative mycobacteria Microbiology (Reading, England) 2001 147 Pt 7 1825-1837 11429460
-
(2001)
Microbiology (Reading, England)
, vol.147
, Issue.PART 7
, pp. 1825-1837
-
-
Watanabe, M.1
Aoyagi, Y.2
Ridell, M.3
Minnikin, D.E.4
-
12
-
-
0014247955
-
Ribonucleic acid, deoxyribonucleic acid, and protein content of cells of different ages of Mycobacterium tuberculosis and the ralationship to immunogenicity
-
252013 4966539
-
Youmans AS Youmans GP Ribonucleic acid, deoxyribonucleic acid, and protein content of cells of different ages of Mycobacterium tuberculosis and the ralationship to immunogenicity J Bacteriol 1968 95 2 272-279 252013 4966539
-
(1968)
J Bacteriol
, vol.95
, Issue.2
, pp. 272-279
-
-
Youmans, A.S.1
Youmans, G.P.2
-
13
-
-
0037250391
-
HGT-DB: A database of putative horizontally transferred genes in prokaryotic complete genomes
-
165451 12519978 10.1093/nar/gkg004
-
Garcia-Vallve S Guzman E Montero MA Romeu A HGT-DB: A database of putative horizontally transferred genes in prokaryotic complete genomes Nucleic acids research 2003 31 1 187-189 165451 12519978 10.1093/nar/ gkg004
-
(2003)
Nucleic Acids Research
, vol.31
, Issue.1
, pp. 187-189
-
-
Garcia-Vallve, S.1
Guzman, E.2
Montero, M.A.3
Romeu, A.4
-
14
-
-
14244250191
-
Compiling a molecular inventory for Mycobacterium bovis BCG at two growth rates: Evidence for growth rate-mediated regulation of ribosome biosynthesis and lipid metabolism
-
1064002 15716438 10.1128/JB.187.5.1677-1684.2005
-
Beste DJ Peters J Hooper T Avignone-Rossa C Bushell ME McFadden J Compiling a molecular inventory for Mycobacterium bovis BCG at two growth rates: Evidence for growth rate-mediated regulation of ribosome biosynthesis and lipid metabolism J Bacteriol 2005 187 5 1677-1684 1064002 15716438 10.1128/JB.187.5.1677-1684.2005
-
(2005)
J Bacteriol
, vol.187
, Issue.5
, pp. 1677-1684
-
-
Beste, D.J.1
Peters, J.2
Hooper, T.3
Avignone-Rossa, C.4
Bushell, M.E.5
McFadden, J.6
-
15
-
-
0014801541
-
Chemical composition of the cell wall of the H37Ra strain of Mycobacterium tuberculosis
-
247620 4988039
-
Acharya PV Goldman DS Chemical composition of the cell wall of the H37Ra strain of Mycobacterium tuberculosis J Bacteriol 1970 102 3 733-739 247620 4988039
-
(1970)
J Bacteriol
, vol.102
, Issue.3
, pp. 733-739
-
-
Acharya, P.V.1
Goldman, D.S.2
-
18
-
-
0034001077
-
The physiology and pathogenicity of Mycobacterium tuberculosis grown under controlled conditions in a defined medium
-
10.1046/j.1365-2672.2000.01020.x 10792526
-
James BW Williams A Marsh PD The physiology and pathogenicity of Mycobacterium tuberculosis grown under controlled conditions in a defined medium Journal of applied microbiology 2000 88 4 669-677 10.1046/ j.1365-2672.2000.01020.x 10792526
-
(2000)
Journal of Applied Microbiology
, vol.88
, Issue.4
, pp. 669-677
-
-
James, B.W.1
Williams, A.2
Marsh, P.D.3
-
19
-
-
2942565809
-
Quantitative relationships for specific growth rates and macromolecular compositions of Mycobacterium tuberculosis, Streptomyces coelicolor A3(2) and Escherichia coli B/r: An integrative theoretical approach
-
15133103
-
Cox RA Quantitative relationships for specific growth rates and macromolecular compositions of Mycobacterium tuberculosis, Streptomyces coelicolor A3(2) and Escherichia coli B/r: An integrative theoretical approach Microbiology (Reading, England) 2004 150 Pt 5 1413-1426 15133103
-
(2004)
Microbiology (Reading, England)
, vol.150
, Issue.PART 5
, pp. 1413-1426
-
-
Cox, R.A.1
-
20
-
-
0033872759
-
The stringent response of Mycobacterium tuberculosis is required for long-term survival
-
111369 10940033 10.1128/JB.182.17.4889-4898.2000
-
Primm TP Andersen SJ Mizrahi V Avarbock D Rubin H Barry CE 3rd The stringent response of Mycobacterium tuberculosis is required for long-term survival J Bacteriol 2000 182 17 4889-4898 111369 10940033 10.1128/JB.182.17.4889-4898.2000
-
(2000)
J Bacteriol
, vol.182
, Issue.17
, pp. 4889-4898
-
-
Primm, T.P.1
Andersen, S.J.2
Mizrahi, V.3
Avarbock, D.4
Rubin, H.5
Barry III, C.E.6
-
21
-
-
0037021804
-
Characterizing the metabolic phenotype: A phenotype phase plane analysis
-
10.1002/bit.10047 11745171
-
Edwards J Ramakrishna R Palsson B Characterizing the metabolic phenotype: A phenotype phase plane analysis Biotechnol Bioeng 2002 77 1 27-36 10.1002/bit.10047 11745171
-
(2002)
Biotechnol Bioeng
, vol.77
, Issue.1
, pp. 27-36
-
-
Edwards, J.1
Ramakrishna, R.2
Palsson, B.3
-
22
-
-
4644220226
-
Genome-scale in silico models of E. coli have multiple equivalent phenotypic states: Assessment of correlated reaction subsets that comprise network states
-
515326 15342562 10.1101/gr.2546004
-
Reed J Palsson B Genome-scale in silico models of E. coli have multiple equivalent phenotypic states: Assessment of correlated reaction subsets that comprise network states Genome Res 2004 14 9 1797-1805 515326 15342562 10.1101/gr.2546004
-
(2004)
Genome Res
, vol.14
, Issue.9
, pp. 1797-1805
-
-
Reed, J.1
Palsson, B.2
-
23
-
-
0345701347
-
Genes required for mycobacterial growth defined by high density mutagenesis
-
10.1046/j.1365-2958.2003.03425.x 12657046
-
Sassetti CM Boyd DH Rubin EJ Genes required for mycobacterial growth defined by high density mutagenesis Mol Microbiol 2003 48 1 77-84 10.1046/j.1365-2958.2003.03425.x 12657046
-
(2003)
Mol Microbiol
, vol.48
, Issue.1
, pp. 77-84
-
-
Sassetti, C.M.1
Boyd, D.H.2
Rubin, E.J.3
-
24
-
-
0344328817
-
An expanded genome-scale model of Escherichia coli K-12 (iJR904 GSM/GPR)
-
193654 12952533 10.1186/gb-2003-4-9-r54
-
Reed JL Vo TD Schilling CH Palsson BO An expanded genome-scale model of Escherichia coli K-12 (iJR904 GSM/GPR) Genome biology 2003 4 9 R54 193654 12952533 10.1186/gb-2003-4-9-r54
-
(2003)
Genome Biology
, vol.4
, Issue.9
-
-
Reed, J.L.1
Vo, T.D.2
Schilling, C.H.3
Palsson, B.O.4
-
26
-
-
2142694242
-
Uptake of carbon monoxide and hydrogen at environmentally relevant concentrations by mycobacteria
-
310020 14660375 10.1128/AEM.69.12.7266-7272.2003
-
King GM Uptake of carbon monoxide and hydrogen at environmentally relevant concentrations by mycobacteria Appl Environ Microbiol 2003 69 12 7266-7272 310020 14660375 10.1128/AEM.69.12.7266-7272.2003
-
(2003)
Appl Environ Microbiol
, vol.69
, Issue.12
, pp. 7266-7272
-
-
King, G.M.1
-
27
-
-
0037214410
-
Growth of mycobacteria on carbonmonoxide and methanol
-
141938 12486050 10.1128/JB.185.1.142-147.2003
-
Park SW Hwang EH Park H Kim JA Heo J Lee KH Song T Kim E Ro YT Kim SW Growth of mycobacteria on carbonmonoxide and methanol J Bacteriol 2003 185 1 142-147 141938 12486050 10.1128/JB.185.1.142-147.2003
-
(2003)
J Bacteriol
, vol.185
, Issue.1
, pp. 142-147
-
-
Park, S.W.1
Hwang, E.H.2
Park, H.3
Kim, J.A.4
Heo, J.5
Lee, K.H.6
Song, T.7
Kim, E.8
Ro, Y.T.9
Kim, S.W.10
-
28
-
-
33644915024
-
Ancient genes in contemporary persistent microbial pathogens
-
16501059
-
Srinivasan V Morowitz HJ Ancient genes in contemporary persistent microbial pathogens The Biological bulletin 2006 210 1 1-9 16501059
-
(2006)
The Biological Bulletin
, vol.210
, Issue.1
, pp. 1-9
-
-
Srinivasan, V.1
Morowitz, H.J.2
-
29
-
-
13444269651
-
Gene expression diversity among Mycobacterium tuberculosis clinical isolates
-
15632420
-
Gao Q Kripke KE Saldanha AJ Yan W Holmes S Small PM Gene expression diversity among Mycobacterium tuberculosis clinical isolates Microbiology (Reading, England) 2005 151 Pt 1 5-14 15632420
-
(2005)
Microbiology (Reading, England)
, vol.151
, Issue.PART 1
, pp. 5-14
-
-
Gao, Q.1
Kripke, K.E.2
Saldanha, A.J.3
Yan, W.4
Holmes, S.5
Small, P.M.6
-
30
-
-
0242268400
-
Genetic requirements for mycobacterial survival during infection
-
240732 14569030 10.1073/pnas.2134250100
-
Sassetti CM Rubin EJ Genetic requirements for mycobacterial survival during infection Proc Natl Acad Sci USA 2003 100 22 12989-12994 240732 14569030 10.1073/pnas.2134250100
-
(2003)
Proc Natl Acad Sci USA
, vol.100
, Issue.22
, pp. 12989-12994
-
-
Sassetti, C.M.1
Rubin, E.J.2
-
31
-
-
63149119732
-
Tuberculist Web Server
-
Pasteur Institute
-
Tuberculist Web Server, Pasteur Institute http://genolist.pasteur.fr/ TubercuList/
-
-
-
-
32
-
-
9544253891
-
Genome-scale models of microbial cells: Evaluating the consequences of constraints
-
10.1038/nrmicro1023 15494745
-
Price ND Reed JL Palsson BO Genome-scale models of microbial cells: evaluating the consequences of constraints Nat Rev Microbiol 2004 2 11 886-897 10.1038/nrmicro1023 15494745
-
(2004)
Nat Rev Microbiol
, vol.2
, Issue.11
, pp. 886-897
-
-
Price, N.D.1
Reed, J.L.2
Palsson, B.O.3
-
33
-
-
8544223537
-
Hierarchical thinking in network biology: The unbiased modularization of biochemical networks
-
10.1016/j.tibs.2004.10.001 15544950
-
Papin JA Reed JL Palsson BO Hierarchical thinking in network biology: the unbiased modularization of biochemical networks Trends Biochem Sci 2004 29 12 641-647 10.1016/j.tibs.2004.10.001 15544950
-
(2004)
Trends Biochem Sci
, vol.29
, Issue.12
, pp. 641-647
-
-
Papin, J.A.1
Reed, J.L.2
Palsson, B.O.3
-
34
-
-
15844387127
-
Candidate metabolic network states in human mitochondria. Impact of diabetes, ischemia, and diet
-
10.1074/jbc.M409072200 15572364
-
Thiele I Price ND Vo TD Palsson BO Candidate metabolic network states in human mitochondria. Impact of diabetes, ischemia, and diet J Biol Chem 2005 280 12 11683-11695 10.1074/jbc.M409072200 15572364
-
(2005)
J Biol Chem
, vol.280
, Issue.12
, pp. 11683-11695
-
-
Thiele, I.1
Price, N.D.2
Vo, T.D.3
Palsson, B.O.4
-
35
-
-
1242274402
-
Flux coupling analysis of genome-scale metabolic network reconstructions
-
327106 14718379 10.1101/gr.1926504
-
Burgard AP Nikolaev EV Schilling CH Maranas CD Flux coupling analysis of genome-scale metabolic network reconstructions Genome Res 2004 14 2 301-312 327106 14718379 10.1101/gr.1926504
-
(2004)
Genome Res
, vol.14
, Issue.2
, pp. 301-312
-
-
Burgard, A.P.1
Nikolaev, E.V.2
Schilling, C.H.3
Maranas, C.D.4
-
39
-
-
33748419613
-
Novel targets for tuberculosis drug discovery
-
10.1016/j.coph.2006.06.004 16904376
-
Mdluli K Spigelman M Novel targets for tuberculosis drug discovery Current opinion in pharmacology 2006 6 5 459-467 10.1016/ j.coph.2006.06.004 16904376
-
(2006)
Current Opinion in Pharmacology
, vol.6
, Issue.5
, pp. 459-467
-
-
Mdluli, K.1
Spigelman, M.2
-
40
-
-
34447339475
-
-
Systems Biology Research Group, UCSD
-
Systems Biology Research Group, UCSD http://systemsbiology.ucsd.edu/
-
-
-
-
41
-
-
33847654799
-
Flux balance analysis of mycolic Acid pathway: Targets for anti-tubercular drugs
-
1246807 16261191 10.1371/journal.pcbi.0010046
-
Raman K Rajagopalan P Chandra N Flux balance analysis of mycolic Acid pathway: Targets for anti-tubercular drugs PLoS computational biology 2005 1 5 e46 1246807 16261191 10.1371/journal.pcbi.0010046
-
(2005)
PLoS Computational Biology
, vol.1
, Issue.5
-
-
Raman, K.1
Rajagopalan, P.2
Chandra, N.3
-
42
-
-
31144435316
-
Towards multidimensional genome annotation
-
10.1038/nrg1769 16418748
-
Reed JL Famili I Thiele I Palsson BO Towards multidimensional genome annotation Nat Rev Genet 2006 7 2 130-141 10.1038/nrg1769 16418748
-
(2006)
Nat Rev Genet
, vol.7
, Issue.2
, pp. 130-141
-
-
Reed, J.L.1
Famili, I.2
Thiele, I.3
Palsson, B.O.4
-
43
-
-
34447308322
-
Genome-scale analysis of Saccharomyces cerevisiae metabolism and ethanol production in fed-batch culture
-
17243146
-
Hjersted JL Henson MA Mahadevan R Genome-scale analysis of Saccharomyces cerevisiae metabolism and ethanol production in fed-batch culture Biotechnol Bioeng 2007 17243146
-
(2007)
Biotechnol Bioeng
-
-
Hjersted, J.L.1
Henson, M.A.2
Mahadevan, R.3
-
44
-
-
0037023907
-
Stoichiometric model for evaluating the metabolic capabilities of the facultative methylotroph Methylobacterium extorquens AM1, with application to reconstruction of C(3) and C(4) metabolism
-
10.1002/bit.10200 11920446
-
Van Dien SJ Lidstrom ME Stoichiometric model for evaluating the metabolic capabilities of the facultative methylotroph Methylobacterium extorquens AM1, with application to reconstruction of C(3) and C(4) metabolism Biotechnol Bioeng 2002 78 3 296-312 10.1002/bit.10200 11920446
-
(2002)
Biotechnol Bioeng
, vol.78
, Issue.3
, pp. 296-312
-
-
Van Dien, S.J.1
Lidstrom, M.E.2
-
45
-
-
34447328833
-
-
The Institute for Genomic Research http://www.tigr.org/
-
-
-
-
46
-
-
34447323153
-
-
Kyoto Encyclopedia of Genes and Genomes http://www.genome.jp/kegg/
-
-
-
-
47
-
-
34447323412
-
-
The SEED http://theseed.uchicago.edu/FIG/index.cgi
-
-
-
-
48
-
-
0017381712
-
Possible use of the oxygen uptake rate in the evaluation of BCG vaccines
-
10.1016/0092-1157(77)90006-3 328506
-
van Hemert PA Tiesjema RH Possible use of the oxygen uptake rate in the evaluation of BCG vaccines Journal of biological standardization 1977 5 2 121-129 10.1016/0092-1157(77)90006-3 328506
-
(1977)
Journal of Biological Standardization
, vol.5
, Issue.2
, pp. 121-129
-
-
van Hemert, P.A.1
Tiesjema, R.H.2
|