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Volumn 187, Issue 4, 2011, Pages 1053-1066

Genetic analysis implicates the Set3/Hos2 Histone deacetylase in the deposition and remodeling of nucleosomes containing H2A.Z

Author keywords

[No Author keywords available]

Indexed keywords

HISTONE DEACETYLASE;

EID: 79955386599     PISSN: 00166731     EISSN: 00166731     Source Type: Journal    
DOI: 10.1534/genetics.110.125419     Document Type: Article
Times cited : (24)

References (77)
  • 2
    • 34047111213 scopus 로고    scopus 로고
    • Translational and rotational settings of H2A.Z nucleosomes across the Saccharomyces cerevisiae genome
    • Albert, I., Mavrich T. N., Tomsho L. P., Qi J., Zanton S. J. et al., 2007 Translational and rotational settings of H2A.Z nucleosomes across the Saccharomyces cerevisiae genome. Nature 446: 572-576.
    • (2007) Nature , vol.446 , pp. 572-576
    • Albert, I.1    Mavrich T., N.2    Tomsho L., P.3    Qi, J.4    Zanton S., J.5
  • 3
    • 77952364528 scopus 로고    scopus 로고
    • NuA4-dependent acetylation of nucleosomal histones H4 and H2A directly stimulates incorporation of H2A.Z by the SWR1 complex
    • Altaf, M., Auger A., Monnet-Saksouk J., Brodeur J., Piquet S. et al., 2010 NuA4-dependent acetylation of nucleosomal histones H4 and H2A directly stimulates incorporation of H2A.Z by the SWR1 complex. J. Biol. Chem. 285: 15966-15977.
    • (2010) J. Biol. Chem , vol.285 , pp. 15966-15977
    • Altaf, M.1    Auger, A.2    Monnet-Saksouk, J.3    Brodeur, J.4    Piquet, S.5
  • 4
    • 34249026300 scopus 로고    scopus 로고
    • High-resolution profiling of histone methylations in the human genome
    • Barski, A., Cuddapah S., Cui K., Roh T. Y., Schones D. E. et al., 2007 High-resolution profiling of histone methylations in the human genome. Cell 129: 823-837.
    • (2007) Cell , vol.129 , pp. 823-837
    • Barski, A.1    Cuddapah, S.2    Cui, K.3    Roh T., Y.4    Schones D., E.5
  • 5
    • 0025959707 scopus 로고
    • Use of a screen for synthetic lethal and multicopy suppressee mutants to identify two new genes involved in morphogenesis in Saccharomyces cerevisiae
    • Bender, A., and Pringle J. R., 1991 Use of a screen for synthetic lethal and multicopy suppressee mutants to identify two new genes involved in morphogenesis in Saccharomyces cerevisiae. Mol. Cell Biol. 11: 1295-1305.
    • (1991) Mol. Cell Biol , vol.11 , pp. 1295-1305
    • Bender, A.1    Pringle J., R.2
  • 6
    • 34548213631 scopus 로고    scopus 로고
    • The Slx5-Slx8 complex affects sumoylation of DNA repair proteins and negatively regulates recombination
    • Burgess, R. C., Rahman S., Lisby M., Rothstein R. and Zhao X., 2007 The Slx5-Slx8 complex affects sumoylation of DNA repair proteins and negatively regulates recombination. Mol. Cell Biol. 27: 6153-6162.
    • (2007) Mol. Cell Biol , vol.27 , pp. 6153-6162
    • Burgess, R.C.1    Rahman, S.2    Lisby, M.3    Rothstein, R.4    Zhao, X.5
  • 7
    • 70349731733 scopus 로고    scopus 로고
    • Ubiquitination of histone H2B regulates chromatin dynamics by enhancing nucleosome stability
    • Chandrasekharan, M. B., Huang F. and Sun Z. W., 2009 Ubiquitination of histone H2B regulates chromatin dynamics by enhancing nucleosome stability. Proc. Natl. Acad. Sci. USA 106: 16686-16691.
    • (2009) Proc. Natl. Acad. Sci. USA , vol.106 , pp. 16686-16691
    • Chandrasekharan, M.B.1    Huang, F.2    Sun Z., W.3
  • 8
    • 0029041887 scopus 로고
    • Bdf1, a yeast chromosomal protein required for sporulation
    • Chua, P., and Roeder G. S., 1995 Bdf1, a yeast chromosomal protein required for sporulation. Mol. Cell Biol. 15: 3685-3696.
    • (1995) Mol. Cell Biol , vol.15 , pp. 3685-3696
    • Chua, P.1    Roeder G., S.2
  • 9
    • 47049125352 scopus 로고    scopus 로고
    • Hos2p/Set3p deacetylase complex signals secretory stress through the mpk1p cell integrity pathway
    • Cohen, T. J., Mallory M. J., Strich R. and Yao T. P., 2008 Hos2p/Set3p deacetylase complex signals secretory stress through the mpk1p cell integrity pathway. Eukaryot. Cell 7: 1191-1199.
    • (2008) Eukaryot. Cell , vol.7 , pp. 1191-1199
    • Cohen, T.J.1    Mallory M., J.2    Strich, R.3    Yao T., P.4
  • 10
    • 34147217542 scopus 로고    scopus 로고
    • Functional dissection of protein complexes involved in yeast chromosome biology using a genetic interaction map
    • Collins, S. R., Miller K. M., Maas N. L., Roguev A., Fillingham J. et al., 2007 Functional dissection of protein complexes involved in yeast chromosome biology using a genetic interaction map. Nature 446: 806-810.
    • (2007) Nature , vol.446 , pp. 806-810
    • Collins, S.R.1    Miller K., M.2    Maas N., L.3    Roguev, A.4    Fillingham, J.5
  • 12
    • 55549148715 scopus 로고    scopus 로고
    • H2AZ is enriched at polycomb complex target genes in es cells and is necessary for lineage commitment
    • Creyghton, M. P., Markoulaki S., Levine S. S., Hanna J., Lodato M. A. et al., 2008 H2AZ is enriched at polycomb complex target genes in es cells and is necessary for lineage commitment. Cell 135: 649-661.
    • (2008) Cell , vol.135 , pp. 649-661
    • Creyghton, M.P.1    Markoulaki, S.2    Levine S., S.3    Hanna, J.4    Lodato M., A.5
  • 13
    • 58049191558 scopus 로고    scopus 로고
    • Chromatin signatures in multipotent human hematopoietic stem cells indicate the fate of bivalent genes during differentiation
    • Cui, K., Zang C., Roh T. Y., Schones D. E., Childs R. W. et al., 2009 Chromatin signatures in multipotent human hematopoietic stem cells indicate the fate of bivalent genes during differentiation. Cell. Stem Cell 4: 80-93.
    • (2009) Cell. Stem Cell , vol.4 , pp. 80-93
    • Cui, K.1    Zang, C.2    Roh T., Y.3    Schones D., E.4    Childs R., W.5
  • 14
    • 38949174194 scopus 로고    scopus 로고
    • Slx5 promotes transcriptional silencing and is required for robust growth in the absence of Sir2
    • Darst, R. P., Garcia S. N., Koch M. R. and Pillus L., 2008 Slx5 promotes transcriptional silencing and is required for robust growth in the absence of Sir2. Mol. Cell Biol. 28: 1361-1372.
    • (2008) Mol. Cell Biol , vol.28 , pp. 1361-1372
    • Darst, R.P.1    Garcia S., N.2    Koch M., R.3    Pillus, L.4
  • 16
    • 61349119934 scopus 로고    scopus 로고
    • Functional organization of the S. cerevisiae phosphorylation network
    • Fiedler, D., Braberg H., Mehta M., Chechik G., Cagney G. et al., 2009 Functional organization of the S. cerevisiae phosphorylation network. Cell 136: 952-963.
    • (2009) Cell , vol.136 , pp. 952-963
    • Fiedler, D.1    Braberg, H.2    Mehta, M.3    Chechik, G.4    Cagney, G.5
  • 17
    • 63049135667 scopus 로고    scopus 로고
    • The role of RAD6 in recombinational repair, checkpoints and meiosis via histone modification
    • Game, J. C., and Chernikova S. B., 2009 The role of RAD6 in recombinational repair, checkpoints and meiosis via histone modification. DNA Repair 8: 470-482.
    • (2009) DNA Repair , vol.8 , pp. 470-482
    • Game, J.C.1    Chernikova S., B.2
  • 18
    • 0037173615 scopus 로고    scopus 로고
    • Functional profiling of the Saccharomyces cerevisiae genome
    • Giaever, G., Chu A. M., Ni L., Connelly C., Riles L. et al., 2002 Functional profiling of the Saccharomyces cerevisiae genome. Nature 418: 387-391.
    • (2002) Nature , vol.418 , pp. 387-391
    • Giaever, G.1    Chu A., M.2    Ni, L.3    Connelly, C.4    Riles, L.5
  • 19
    • 34347342814 scopus 로고    scopus 로고
    • The Tup1 corepressor directs Htz1 deposition at a specific promoter nucleosome marking the GAL1 gene for rapid activation
    • Gligoris, T., Thireos G. and Tzamarias D., 2007 The Tup1 corepressor directs Htz1 deposition at a specific promoter nucleosome marking the GAL1 gene for rapid activation. Mol. Cell Biol. 27: 4198-4205.
    • (2007) Mol. Cell Biol , vol.27 , pp. 4198-4205
    • Gligoris, T.1    Thireos, G.2    Tzamarias, D.3
  • 20
    • 77955497472 scopus 로고    scopus 로고
    • Phosphorylated Pol II CTD recruits multiple HDACs, including Rpd3C(S), for methylation-dependent deacetylation of ORF nucleosomes
    • Govind, C. K., Qiu H., Ginsburg D. S., Ruan C., Hofmeyer K. et al., 2010 Phosphorylated Pol II CTD recruits multiple HDACs, including Rpd3C(S), for methylation-dependent deacetylation of ORF nucleosomes. Mol. Cell 39: 234-246.
    • (2010) Mol. Cell , vol.39 , pp. 234-246
    • Govind, C.K.1    Qiu, H.2    Ginsburg D., S.3    Ruan, C.4    Hofmeyer, K.5
  • 21
    • 4344672753 scopus 로고    scopus 로고
    • Promoter-dependent roles for the Srb10 cyclin-dependent kinase and the Hda1 deacetylase in Tup1-mediated repression in Saccharomyces cerevisiae
    • Green, S. R., and Johnson A. D., 2004 Promoter-dependent roles for the Srb10 cyclin-dependent kinase and the Hda1 deacetylase in Tup1-mediated repression in Saccharomyces cerevisiae. Mol. Biol. Cell 15: 4191-4202.
    • (2004) Mol. Biol. Cell , vol.15 , pp. 4191-4202
    • Green, S.R.1    Johnson A., D.2
  • 22
    • 0034192756 scopus 로고    scopus 로고
    • A core SMRT corepressor complex containing HDAC3 and TBL1, a WD40-repeat protein linked to deafness
    • Guenther, M. G., Lane W. S., Fischle W., Verdin E., Lazar M. A. et al., 2000 A core SMRT corepressor complex containing HDAC3 and TBL1, a WD40-repeat protein linked to deafness. Genes Dev. 14: 1048-1057.
    • (2000) Genes Dev , vol.14 , pp. 1048-1057
    • Guenther, M.G.1    Lane W., S.2    Fischle, W.3    Verdin, E.4    Lazar M., A.5
  • 23
    • 29144531244 scopus 로고    scopus 로고
    • Variant histone H2A.Z is globally localized to the promoters of inactive yeast genes and regulates nucleosome positioning
    • Guillemette, B., Bataille A. R., Gevry N., Adam M., Blanchette M. et al., 2005 Variant histone H2A.Z is globally localized to the promoters of inactive yeast genes and regulates nucleosome positioning. PLoS Biol. 3: e384.
    • (2005) PLoS Biol , vol.3
    • Guillemette, B.1    Bataille A., R.2    Gevry, N.3    Adam, M.4    Blanchette, M.5
  • 24
    • 77954738659 scopus 로고    scopus 로고
    • Roles for H2A.Z and its acetylation in GAL1 transcription and gene induction, but not GAL1-transcriptional memory
    • Halley, J. E., Kaplan T., Wang A. Y., Kobor M. S. and Rine J., 2010 Roles for H2A.Z and its acetylation in GAL1 transcription and gene induction, but not GAL1-transcriptional memory. PLoS Biol. 8: e1000401.
    • (2010) PLoS Biol , vol.8
    • Halley, J.E.1    Kaplan, T.2    Wang A., Y.3    Kobor M., S.4    Rine, J.5
  • 25
    • 14244260623 scopus 로고    scopus 로고
    • Defining the SUMO-modified proteome by multiple approaches in Saccharomyces cerevisiae
    • Hannich, J. T., Lewis A., Kroetz M. B., Li S. J., Heide H. et al., 2005 Defining the SUMO-modified proteome by multiple approaches in Saccharomyces cerevisiae. J. Biol. Chem. 280: 4102-4110.
    • (2005) J. Biol. Chem , vol.280 , pp. 4102-4110
    • Hannich, J.T.1    Lewis, A.2    Kroetz M., B.3    Li S., J.4    Heide, H.5
  • 26
    • 40649106738 scopus 로고    scopus 로고
    • Interaction of the glucocorticoid receptor with the chromatin landscape
    • John, S., Sabo P. J., Johnson T. A., Sung M. H., Biddie S. C. et al., 2008 Interaction of the glucocorticoid receptor with the chromatin landscape. Mol. Cell 29: 611-624.
    • (2008) Mol. Cell , vol.29 , pp. 611-624
    • John, S.1    Sabo P., J.2    Johnson T., A.3    Sung M., H.4    Biddie S., C.5
  • 27
    • 40149109321 scopus 로고    scopus 로고
    • A systematic library for comprehensive overexpression screens in Saccharomyces cerevisiae
    • Jones, G. M., Stalker J., Humphray S., West A., Cox T. et al., 2008 A systematic library for comprehensive overexpression screens in Saccharomyces cerevisiae. Nat. Methods 5: 239-241.
    • (2008) Nat. Methods , vol.5 , pp. 239-241
    • Jones, G.M.1    Stalker, J.2    Humphray, S.3    West, A.4    Cox, T.5
  • 28
    • 0032849084 scopus 로고    scopus 로고
    • DOT4 links silencing and cell growth in Saccharomyces cerevisiae
    • Kahana, A., and Gottschling D. E., 1999 DOT4 links silencing and cell growth in Saccharomyces cerevisiae. Mol. Cell Biol. 19: 6608-6620.
    • (1999) Mol. Cell Biol , vol.19 , pp. 6608-6620
    • Kahana, A.1    Gottschling D., E.2
  • 29
    • 64249111489 scopus 로고    scopus 로고
    • Dimethylation of H3K4 by Set1 recruits the Set3 histone deacetylase complex to 59 transcribed regions
    • Kim, T., and Buratowski S., 2009 Dimethylation of H3K4 by Set1 recruits the Set3 histone deacetylase complex to 59 transcribed regions. Cell 137: 259-272.
    • (2009) Cell , vol.137 , pp. 259-272
    • Kim, T.1    Buratowski, S.2
  • 30
    • 19344372948 scopus 로고    scopus 로고
    • A protein complex containing the conserved Swi2/Snf2-related ATPase Swr1p deposits histone variant H2A.Z into euchromatin
    • Kobor, M. S., Venkatasubrahmanyam S., Meneghini M. D., Gin J. W., Jennings J. L. et al., 2004 A protein complex containing the conserved Swi2/Snf2-related ATPase Swr1p deposits histone variant H2A.Z into euchromatin. PLoS Biol. 2: E131.
    • (2004) PLoS Biol , vol.2
    • Kobor, M.S.1    Venkatasubrahmanyam, S.2    Meneghini M., D.3    Gin J., W.4    Jennings J., L.5
  • 31
    • 9144269660 scopus 로고    scopus 로고
    • A Snf2 family ATPase complex required for recruitment of the histone H2A variant Htz1
    • Krogan, N. J., Keogh M. C., Datta N., Sawa C., Ryan O. W. et al., 2003 A Snf2 family ATPase complex required for recruitment of the histone H2A variant Htz1. Mol. Cell 12: 1565-1576.
    • (2003) Mol. Cell , vol.12 , pp. 1565-1576
    • Krogan, N.J.1    Keogh M., C.2    Datta, N.3    Sawa, C.4    Ryan O., W.5
  • 32
    • 29444454191 scopus 로고    scopus 로고
    • Preferential occupancy of histone variant H2AZ at inactive promoters influences local histone modifications and chromatin remodeling
    • Li, B., Pattenden S. G., Lee D., Gutierrez J., Chen J. et al., 2005 Preferential occupancy of histone variant H2AZ at inactive promoters influences local histone modifications and chromatin remodeling. Proc. Natl. Acad. Sci. USA 102: 18385-18390.
    • (2005) Proc. Natl. Acad. Sci. USA , vol.102 , pp. 18385-18390
    • Li, B.1    Pattenden S., G.2    Lee, D.3    Gutierrez, J.4    Chen, J.5
  • 33
    • 0034663815 scopus 로고    scopus 로고
    • Both corepressor proteins SMRT and N-CoR exist in large protein complexes containing HDAC3
    • Li, J., Wang J., Nawaz Z., Liu J. M., Qin J. et al., 2000 Both corepressor proteins SMRT and N-CoR exist in large protein complexes containing HDAC3. EMBO J. 19: 4342-4350.
    • (2000) EMBO J , vol.19 , pp. 4342-4350
    • Li, J.1    Wang, J.2    Nawaz, Z.3    Liu, J.M.4    Qin, J.5
  • 34
    • 37249076354 scopus 로고    scopus 로고
    • The yeast Slx5-Slx8 DNA integrity complex displays ubiquitin ligase activity
    • Li, T., Fung J., Mullen J. R. and Brill S. J., 2007a The yeast Slx5-Slx8 DNA integrity complex displays ubiquitin ligase activity. Cell Cycle 6: 2800-2809.
    • (2007) Cell Cycle , vol.6 , pp. 2800-2809
    • Li, T.1    Fung, J.2    Mullen J., R.3    Brill S., J.4
  • 35
    • 35348982302 scopus 로고    scopus 로고
    • Stimulation of in vitro sumoylation by Slx5-Slx8: Evidence for a functional interaction with the SUMO pathway
    • Li, T., Mullen J. R., Slagle C. E. and Brill S. J., 2007b Stimulation of in vitro sumoylation by Slx5-Slx8: evidence for a functional interaction with the SUMO pathway. DNA Repair 6: 1679-1691.
    • (2007) DNA Repair , vol.6 , pp. 1679-1691
    • Li, T.1    Mullen J., R.2    Slagle C., E.3    Brill S., J.4
  • 36
    • 48749114997 scopus 로고    scopus 로고
    • A comprehensive synthetic genetic interaction network governing yeast histone acetylation and deacetylation
    • Lin, Y. Y., Qi Y., Lu J. Y., Pan X., Yuan D. S. et al., 2008 A comprehensive synthetic genetic interaction network governing yeast histone acetylation and deacetylation. Genes Dev. 22: 2062-2074.
    • (2008) Genes Dev , vol.22 , pp. 2062-2074
    • Lin, Y.Y.1    Qi, Y.2    Lu J., Y.3    Pan, X.4    Yuan D., S.5
  • 37
    • 33646873985 scopus 로고    scopus 로고
    • Role of Doa1 in the Saccharomyces cerevisiae DNA damage response
    • Lis, E. T., and Romesberg F. E., 2006 Role of Doa1 in the Saccharomyces cerevisiae DNA damage response. Mol. Cell Biol. 26: 4122-4133.
    • (2006) Mol. Cell Biol , vol.26 , pp. 4122-4133
    • Lis, E.T.1    Romesberg F., E.2
  • 38
    • 0037291695 scopus 로고    scopus 로고
    • Different sensitivities of bromodomain factors 1 and 2 to histone H4 acetylation
    • Matangkasombut, O., and Buratowski S., 2003 Different sensitivities of bromodomain factors 1 and 2 to histone H4 acetylation. Mol. Cell 11: 353-363.
    • (2003) Mol. Cell , vol.11 , pp. 353-363
    • Matangkasombut, O.1    Buratowski, S.2
  • 40
    • 0037154974 scopus 로고    scopus 로고
    • Combinatorial control of gene expression by nuclear receptors and coregulators
    • McKenna, N. J., and O'Malley B. W., 2002 Combinatorial control of gene expression by nuclear receptors and coregulators. Cell 108: 465-474.
    • (2002) Cell , vol.108 , pp. 465-474
    • McKenna, N.J.1    O'Malley B., W.2
  • 41
    • 0037423930 scopus 로고    scopus 로고
    • Conserved histone variant H2A.Z protects euchromatin from the ectopic spread of silent heterochromatin
    • Meneghini, M. D., Wu M., and Madhani H. D., 2003 Conserved histone variant H2A.Z protects euchromatin from the ectopic spread of silent heterochromatin. Cell 112: 725-736.
    • (2003) Cell , vol.112 , pp. 725-736
    • Meneghini, M.D.1    Wu, M.2    Madhani, H.D.3
  • 42
    • 0348184963 scopus 로고    scopus 로고
    • ATP-driven exchange of histone H2AZ variant catalyzed by SWR1 chromatin remodeling complex
    • Mizuguchi, G., Shen X., Landry J., Wu W. H., Sen S. et al., 2004 ATP-driven exchange of histone H2AZ variant catalyzed by SWR1 chromatin remodeling complex. Science 303: 343-348.
    • (2004) Science , vol.303 , pp. 343-348
    • Mizuguchi, G.1    Shen, X.2    Landry, J.3    Wu W., H.4    Sen, S.5
  • 43
    • 0030598895 scopus 로고    scopus 로고
    • A deubiquitinating enzyme interacts with Sir4 and regulates silencing in S
    • Moazed, D., and Johnson D., 1996 A deubiquitinating enzyme interacts with Sir4 and regulates silencing in S. Cerevisiae. Cell 86: 667-677.
    • (1996) Cerevisiae. Cell , vol.86 , pp. 667-677
    • Moazed, D.1    Johnson, D.2
  • 44
    • 77957889181 scopus 로고    scopus 로고
    • The SWR1 histone replacement complex causes genetic instability and genome-wide transcription misregulation in the absence of H2A. Z
    • Morillo-Huesca, M., Clemente-Ruiz M., Andujar E. and Prado F., 2010 The SWR1 histone replacement complex causes genetic instability and genome-wide transcription misregulation in the absence of H2A. Z. PLoS One 5: e12143.
    • (2010) PLoS One , vol.5
    • Morillo-Huesca, M.1    Clemente-Ruiz, M.2    Andujar, E.3    Prado, F.4
  • 45
    • 50649104647 scopus 로고    scopus 로고
    • Activation of the Slx5-Slx8 ubiquitin ligase by poly-small ubiquitin-like modifier conjugates
    • Mullen, J. R., and Brill S. J., 2008 Activation of the Slx5-Slx8 ubiquitin ligase by poly-small ubiquitin-like modifier conjugates. J. Biol. Chem. 283: 19912-19921.
    • (2008) J. Biol. Chem , vol.283 , pp. 19912-19921
    • Mullen, J.R.1    Brill S., J.2
  • 46
    • 54949093203 scopus 로고    scopus 로고
    • Functional targeting of DNA damage to a nuclear pore-associated SUMO-dependent ubiquitin ligase
    • Nagai, S., Dubrana K., Tsai-Pflugfelder M., Davidson M. B., Roberts T. M. et al., 2008 Functional targeting of DNA damage to a nuclear pore-associated SUMO-dependent ubiquitin ligase. Science 322: 597-602.
    • (2008) Science , vol.322 , pp. 597-602
    • Nagai, S.1    Dubrana, K.2    Tsai-Pflugfelder, M.3    Davidson M., B.4    Roberts T., M.5
  • 47
    • 77955485845 scopus 로고    scopus 로고
    • Degradation of the Saccharomyces cerevisiae mating-type regulator alpha1: Genetic dissection of cis-determinants and trans-acting pathways
    • Nixon, C. E., Wilcox A. J., and Laney J. D., 2010 Degradation of the Saccharomyces cerevisiae mating-type regulator alpha1: genetic dissection of cis-determinants and trans-acting pathways. Genetics 185: 497-511.
    • (2010) Genetics , vol.185 , pp. 497-511
    • Nixon, C.E.1    Wilcox, A.J.2    Laney, J.D.3
  • 48
    • 0242298316 scopus 로고    scopus 로고
    • DNA helicase gene interaction network defined using synthetic lethality analyzed by microarray
    • Ooi, S. L., Shoemaker D. D. and Boeke J. D., 2003 DNA helicase gene interaction network defined using synthetic lethality analyzed by microarray. Nat. Genet. 35: 277-286.
    • (2003) Nat. Genet , vol.35 , pp. 277-286
    • Ooi, S.L.1    Shoemaker D., D.2    Boeke J., D.3
  • 49
    • 33644778778 scopus 로고    scopus 로고
    • A DNA integrity network in the yeast Saccharomyces cerevisiae
    • Pan, X., P. Ye, D. S. Yuan, X. Wang, J. S. Bader et al., 2006 A DNA integrity network in the yeast Saccharomyces cerevisiae. Cell 124: 1069-1081.
    • (2006) Cell , vol.124 , pp. 1069-1081
    • Pan, X.1    Ye, P.2    Yuan, D.S.3    Wang, X.4    Bader, J.S.5
  • 50
    • 0035890135 scopus 로고    scopus 로고
    • The S. cerevisiae Set3 complex includes two histone deacetylases, Hos2 and Hst1, and is a meiotic-specific repressor of the sporulation gene program
    • Pijnappel, W. W., Schaft D., Roguev A., Shevchenko A., Tekotte H. et al., 2001 The S. cerevisiae Set3 complex includes two histone deacetylases, Hos2 and Hst1, and is a meiotic-specific repressor of the sporulation gene program. Genes Dev. 15: 2991-3004.
    • (2001) Genes Dev , vol.15 , pp. 2991-3004
    • Pijnappel, W.W.1    Schaft, D.2    Roguev, A.3    Shevchenko, A.4    Tekotte, H.5
  • 51
    • 64549083597 scopus 로고    scopus 로고
    • Sem1p and Ubp6p orchestrate telomeric silencing by modulating histone H2B ubiquitination and H3 acetylation
    • Qin, S., Q. Wang, A. Ray, Wani G., Zhao Q. et al., 2009 Sem1p and Ubp6p orchestrate telomeric silencing by modulating histone H2B ubiquitination and H3 acetylation. Nucleic Acids Res. 37: 1843-1853.
    • (2009) Nucleic Acids Res , vol.37 , pp. 1843-1853
    • Qin, S.1    Wang, Q.2    Ray, A.3    Wani, G.4    Zhao, Q.5
  • 52
    • 26844511498 scopus 로고    scopus 로고
    • Histone variant H2A.Z marks the 59 ends of both active and inactive genes in euchromatin
    • Raisner, R. M., Hartley P. D., Meneghini M. D., Bao M. Z., Liu C.L. et al., 2005 Histone variant H2A.Z marks the 59 ends of both active and inactive genes in euchromatin. Cell 123: 233-248.
    • (2005) Cell , vol.123 , pp. 233-248
    • Raisner, R.M.1    Hartley, P.D.2    Meneghini, M.D.3    Bao, M.Z.4    Liu, C.L.5
  • 53
    • 3042642001 scopus 로고    scopus 로고
    • RNA interference demonstrates a novel role for H2A.Z in chromosome segregation
    • Rangasamy, D., Greaves I. and Tremethick D. J., 2004 RNA interference demonstrates a novel role for H2A.Z in chromosome segregation. Nat. Struct. Mol. Biol. 11: 650-655.
    • (2004) Nat. Struct. Mol. Biol , vol.11 , pp. 650-655
    • Rangasamy, D.1    Greaves, I.2    Tremethick D., J.3
  • 54
    • 0037123767 scopus 로고    scopus 로고
    • Microarray deacetylation maps determine genome-wide functions for yeast histone deacetylases
    • Robyr, D., Suka Y., Xenarios I., Kurdistani S. K., Wang A. et al., 2002 Microarray deacetylation maps determine genome-wide functions for yeast histone deacetylases. Cell 109: 437-446.
    • (2002) Cell , vol.109 , pp. 437-446
    • Robyr, D.1    Suka, Y.2    Xenarios, I.3    Kurdistani S., K.4    Wang, A.5
  • 55
    • 13044310139 scopus 로고    scopus 로고
    • Transposon mutagenesis for the analysis of protein production, function, and localization
    • Ross-MacDonald, P., Sheehan A., Friddle C., Roeder G. S. and Snyder M., 1999 Transposon mutagenesis for the analysis of protein production, function, and localization. Methods Enzymol. 303: 512-532.
    • (1999) Methods Enzymol , vol.303 , pp. 512-532
    • Ross-Macdonald, P.1    Sheehan, A.2    Friddle, C.3    Roeder G., S.4    Snyder, M.5
  • 56
    • 0029856225 scopus 로고    scopus 로고
    • Hda1 and Rpd3 are members of distinct yeast histone deacetylase complexes that regulate silencing and transcription
    • Rundlett, S. E., Carmen A. A., Kobayashi R., Bavykin S., Turner B. M. et al., 1996 Hda1 and Rpd3 are members of distinct yeast histone deacetylase complexes that regulate silencing and transcription. Proc. Natl. Acad. Sci. USA 93: 14503-14508.
    • (1996) Proc. Natl. Acad. Sci. USA , vol.93 , pp. 14503-14508
    • Rundlett, S.E.1    Carmen A., A.2    Kobayashi, R.3    Bavykin, S.4    Turner B., M.5
  • 57
    • 0034721645 scopus 로고    scopus 로고
    • Histone H2A.Z regulats transcription and is partially redundant with nucleosome remodeling complexes
    • Santisteban, M. S., Kalashnikova T. and Smith M. M., 2000 Histone H2A.Z regulats transcription and is partially redundant with nucleosome remodeling complexes. Cell 103: 411-422.
    • (2000) Cell , vol.103 , pp. 411-422
    • Santisteban, M.S.1    Kalashnikova, T.2    Smith M., M.3
  • 58
    • 31544482407 scopus 로고    scopus 로고
    • Mapping pathways and phenotypes by systematic gene overexpression
    • Sopko, R., Huang D., Preston N., Chua G., Papp B. et al., 2006 Mapping pathways and phenotypes by systematic gene overexpression. Mol. Cell 21: 319-330.
    • (2006) Mol. Cell , vol.21 , pp. 319-330
    • Sopko, R.1    Huang, D.2    Preston, N.3    Chua, G.4    Papp, B.5
  • 59
  • 60
    • 11844295965 scopus 로고    scopus 로고
    • The role of histone H2Av variant replacement and histone H4 acetylation in the establishment of Drosophila heterochromatin
    • Swaminathan, J., Baxter E. M. and Corces V. G., 2005 The role of histone H2Av variant replacement and histone H4 acetylation in the establishment of Drosophila heterochromatin. Genes Dev. 19: 65-76.
    • (2005) Genes Dev , vol.19 , pp. 65-76
    • Swaminathan, J.1    Baxter E., M.2    Corces V., G.3
  • 61
    • 0035861532 scopus 로고    scopus 로고
    • Systematic genetic analysis with ordered arrays of yeast deletion mutants
    • Tong, A. H., Evangelista M., Parsons A. B., Xu H., Bader G. D. et al., 2001 Systematic genetic analysis with ordered arrays of yeast deletion mutants. Science 294: 2364-2368.
    • (2001) Science , vol.294 , pp. 2364-2368
    • Tong, A.H.1    Evangelista, M.2    Parsons A., B.3    Xu, H.4    Bader G., D.5
  • 62
    • 10744230485 scopus 로고    scopus 로고
    • Global mapping of the yeast genetic interaction network
    • Tong, A. H., Lesage G., Bader G. D., Ding H., Xu H. et al., 2004 Global mapping of the yeast genetic interaction network. Science 303: 808-813.
    • (2004) Science , vol.303 , pp. 808-813
    • Tong, A.H.1    Lesage, G.2    Bader G., D.3    Ding, H.4    Xu, H.5
  • 64
    • 0037111879 scopus 로고    scopus 로고
    • Requirement of Hos2 histone deacetylase for gene activity in yeast
    • Wang, A., Kurdistani S. K. and Grunstein M., 2002 Requirement of Hos2 histone deacetylase for gene activity in yeast. Science 298: 1412-1414.
    • (2002) Science , vol.298 , pp. 1412-1414
    • Wang, A.1    Kurdistani S., K.2    Grunstein, M.3
  • 65
    • 63049110916 scopus 로고    scopus 로고
    • Quality control of a transcriptional regulator by SUMO-targeted degradation
    • Wang, Z., and Prelich G., 2009 Quality control of a transcriptional regulator by SUMO-targeted degradation. Mol. Cell Biol. 29: 1694-1706.
    • (2009) Mol. Cell Biol , vol.29 , pp. 1694-1706
    • Wang, Z.1    Prelich, G.2
  • 66
    • 33645222457 scopus 로고    scopus 로고
    • Genetic analysis connects Slx5 and Slx8 to the SUMO pathway in Saccharomyces cerevisiae
    • Wang, Z., Jones G. M. and Prelich G., 2006 Genetic analysis connects Slx5 and Slx8 to the SUMO pathway in Saccharomyces cerevisiae. Genetics 172: 1499-1509.
    • (2006) Genetics , vol.172 , pp. 1499-1509
    • Wang, Z.1    Jones G., M.2    Prelich, G.3
  • 67
    • 52949083577 scopus 로고    scopus 로고
    • The genomic distribution and function of histone variant htz-1 during C. elegans embryogenesis
    • Whittle, C. M., McClinic K. N., Ercan S., Zhang X., Green R. D. et al., 2008 The genomic distribution and function of histone variant htz-1 during C. elegans embryogenesis. PLoS Genet. 4: e1000187.
    • (2008) PLoS Genet , vol.4
    • Whittle, C.M.1    McClinic K., N.2    Ercan, S.3    Zhang, X.4    Green R., D.5
  • 68
    • 56849094282 scopus 로고    scopus 로고
    • A genetic interaction map of RNA-processing factors reveals links between Sem1/Dss1-containing complexes and mRNA export and splicing
    • Wilmes, G. M., Bergkessel M., Bandyopadhyay S., Shales M., Braberg H. et al., 2008 A genetic interaction map of RNA-processing factors reveals links between Sem1/Dss1-containing complexes and mRNA export and splicing. Mol. Cell 32: 735-746.
    • (2008) Mol. Cell , vol.32 , pp. 735-746
    • Wilmes, G.M.1    Bergkessel, M.2    Bandyopadhyay, S.3    Shales, M.4    Braberg, H.5
  • 69
    • 8544273758 scopus 로고    scopus 로고
    • Global analysis of protein sumoylation in Saccharomyces cerevisiae
    • Wohlschlegel, J. A., E. S. Johnson, S. I. Reed and J. R. Yates, 3rd, 2004 Global analysis of protein sumoylation in Saccharomyces cerevisiae. J. Biol. Chem. 279: 45662-45668.
    • (2004) J. Biol. Chem , vol.279 , pp. 45662-45668
    • Wohlschlegel, J.A.1    Johnson, E.S.2    Reed, S.I.3    Yates, J.R.4
  • 70
    • 0035105035 scopus 로고    scopus 로고
    • Tup1 utilizes histone H3/H2B-specific Hda1 deacetylase to repress gene activity in yeast
    • Wu, J., Suka N., Carlson M. and Grunstein M., 2001 Tup1 utilizes histone H3/H2B-specific Hda1 deacetylase to repress gene activity in yeast. Mol. Cell 7: 117-126.
    • (2001) Mol. Cell , vol.7 , pp. 117-126
    • Wu, J.1    Suka, N.2    Carlson, M.3    Grunstein, M.4
  • 71
    • 77951806546 scopus 로고    scopus 로고
    • SUMO-independent in vivo activity of a SUMO-targeted ubiquitin ligase toward a short-lived transcription factor
    • Xie, Y., Rubenstein E. M., Matt T. and Hochstrasser M., 2010 SUMO-independent in vivo activity of a SUMO-targeted ubiquitin ligase toward a short-lived transcription factor. Genes Dev. 24: 893-903.
    • (2010) Genes Dev , vol.24 , pp. 893-903
    • Xie, Y.1    Rubenstein E., M.2    Matt, T.3    Hochstrasser, M.4
  • 72
    • 53349117774 scopus 로고    scopus 로고
    • High-quality binary protein interaction map of the yeast interactome network
    • Yu, H., Braun P., Yildirim M. A., Lemmens I., Venkatesan K. et al., 2008 High-quality binary protein interaction map of the yeast interactome network. Science 322: 104-110.
    • (2008) Science , vol.322 , pp. 104-110
    • Yu, H.1    Braun, P.2    Yildirim M., A.3    Lemmens, I.4    Venkatesan, K.5
  • 73
    • 0037925529 scopus 로고    scopus 로고
    • A SANT motif in the SMRTcorepressor interprets the histone code and promotes histone deacetylation
    • Yu, J., Li Y., Ishizuka T., Guenther M. G. and Lazar M. A., 2003 A SANT motif in the SMRTcorepressor interprets the histone code and promotes histone deacetylation. EMBO J. 22: 3403-3410.
    • (2003) EMBO J , vol.22 , pp. 3403-3410
    • Yu, J.1    Li, Y.2    Ishizuka, T.3    Guenther M., G.4    Lazar M., A.5
  • 74
    • 77957872097 scopus 로고    scopus 로고
    • HOS2 and HDA1 encode histone deacetylases with opposing roles in Candida albicans morphogenesis
    • Zacchi, L. F., Schulz W. L. and Davis D. A., 2010 HOS2 and HDA1 encode histone deacetylases with opposing roles in Candida albicans morphogenesis. PLoS One 5: e12171.
    • (2010) PLoS One , vol.5
    • Zacchi, L.F.1    Schulz W., L.2    Davis D., A.3
  • 75
    • 32644477235 scopus 로고    scopus 로고
    • Suppression of genomic instability by Slx5 and Slx8 in Saccharomyces cerevisiae
    • Zhang, C., Roberts T. M., Yang J., Desai R. and Brown G. W., 2006 Suppression of genomic instability by Slx5 and Slx8 in Saccharomyces cerevisiae. DNA Repair 5: 336-346.
    • (2006) DNA Repair , vol.5 , pp. 336-346
    • Zhang, C.1    Roberts T., M.2    Yang, J.3    Desai, R.4    Brown G., W.5
  • 76
    • 26844489856 scopus 로고    scopus 로고
    • Genome-wide dynamics of Htz1, a histone H2A variant that poises repressed/basal promoters for activation through histone loss
    • Zhang, H., Roberts D. N. and Cairns B. R., 2005 Genome-wide dynamics of Htz1, a histone H2A variant that poises repressed/basal promoters for activation through histone loss. Cell 123: 219-231.
    • (2005) Cell , vol.123 , pp. 219-231
    • Zhang, H.1    Roberts D., N.2    Cairns B., R.3
  • 77
    • 55549141877 scopus 로고    scopus 로고
    • Histone H2A.Z and DNA methylation are mutually antagonistic chromatin marks
    • Zilberman, D., Coleman-Derr D., Ballinger T. and Henikoff S., 2008 Histone H2A.Z and DNA methylation are mutually antagonistic chromatin marks. Nature 456: 125-129.
    • (2008) Nature , vol.456 , pp. 125-129
    • Zilberman, D.1    Coleman-Derr, D.2    Ballinger, T.3    Henikoff, S.4


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