Processing and analyzing ChIP-seq data: From short reads to regulatory interactions

Briefings in Functional Genomics

Volumn 9, Issue 5-6, 2010, Pages 466-476

  Leleu, Marion ^a   Lefebvre, Grégory ^a   Rougemont, Jacques ^b  

^a Bioinformatics and Biostatistics Core Facility (BBCF)   (Switzerland)

^b SWISS INSTITUTE OF BIOINFORMATICS   (Switzerland)

Author keywords

Bioinformatics; Chip seq; DNA binding; High throughput sequencing; Transcriptional regulation

Indexed keywords

DNA BINDING PROTEIN;

ARTICLE; BINDING SITE; CHROMATIN IMMUNOPRECIPITATION; CHROMATIN IMMUNOPRECIPITATION AND SEQUENCING; DATA ANALYSIS; DNA SEQUENCE; FOLLOW UP; GENE EXPRESSION; GENE MAPPING; HIGH THROUGHPUT SEQUENCING; QUALITY CONTROL; STATISTICAL ANALYSIS; CHROMATIN; CHROMOSOME MAP; GENETIC TRANSCRIPTION; GENETICS; GENOME; HIGH THROUGHPUT NUCLEOTIDE SEQUENCING; HUMAN; METABOLISM; METHODOLOGY; NUCLEOTIDE SEQUENCE; SACCHAROMYCES CEREVISIAE;

BASE SEQUENCE; CHROMATIN; CHROMATIN IMMUNOPRECIPITATION; CHROMOSOME MAPPING; GENOME; HIGH-THROUGHPUT NUCLEOTIDE SEQUENCING; HUMANS; SACCHAROMYCES CEREVISIAE; SEQUENCE ANALYSIS, DNA; TRANSCRIPTION, GENETIC;

EID: 79955023446     PISSN: 20412649     EISSN: 20412657     Source Type: Journal    
DOI: 10.1093/bfgp/elq022     Document Type: Article

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