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Volumn 10, Issue , 2009, Pages

Efficient yeast ChIP-Seq using multiplex short-read DNA sequencing

Author keywords

[No Author keywords available]

Indexed keywords

DNA BINDING PROTEIN; FUNGAL DNA; PROTEIN CSE4; PROTEIN STE12; RNA POLYMERASE II; UNCLASSIFIED DRUG; TRANSCRIPTION FACTOR;

EID: 62749132272     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/1471-2164-10-37     Document Type: Article
Times cited : (134)

References (64)
  • 1
    • 45549088326 scopus 로고    scopus 로고
    • The transcriptional landscape of the yeast genome defined by RNA sequencing
    • 10.1126/science.1158441 18451266
    • Nagalakshmi U Wang Z Waern K Shou C Raha D Gerstein M Snyder M The transcriptional landscape of the yeast genome defined by RNA sequencing Science 2008, 320(5881):1344-1349. 10.1126/science.1158441 18451266
    • (2008) Science , vol.320 , Issue.5881 , pp. 1344-1349
    • Nagalakshmi, U.1    Wang, Z.2    Waern, K.3    Shou, C.4    Raha, D.5    Gerstein, M.6    Snyder, M.7
  • 2
    • 46249096804 scopus 로고    scopus 로고
    • Dynamic repertoire of a eukaryotic transcriptome surveyed at single-nucleotide resolution
    • 10.1038/nature07002 18488015
    • Wilhelm B Marguerat S Watt S Schubert F Wood V Goodhead I Penkett C Rogers J Bähler J Dynamic repertoire of a eukaryotic transcriptome surveyed at single-nucleotide resolution Nature 2008, 453(7199):1239-1243. 10.1038/nature07002 18488015
    • (2008) Nature , vol.453 , Issue.7199 , pp. 1239-1243
    • Wilhelm, B.1    Marguerat, S.2    Watt, S.3    Schubert, F.4    Wood, V.5    Goodhead, I.6    Penkett, C.7    Rogers, J.8    Bähler, J.9
  • 3
    • 42749087226 scopus 로고    scopus 로고
    • Highly integrated single-base resolution maps of the epigenome in Arabidopsis
    • 10.1016/j.cell.2008.03.029 18423832
    • Lister R O'Malley R Tonti-Filippini J Gregory B Berry C Millar A Ecker J Highly integrated single-base resolution maps of the epigenome in Arabidopsis Cell 2008, 133(3):523-536. 10.1016/j.cell.2008.03.029 18423832
    • (2008) Cell , vol.133 , pp. 523-536
    • Lister, R.1    O'Malley, R.2    Tonti-Filippini, J.3    Gregory, B.4    Berry, C.5    Millar, A.6    Ecker, J.7
  • 4
    • 46249106990 scopus 로고    scopus 로고
    • Mapping and quantifying mammalian transcriptomes by RNA-Seq
    • 10.1038/nmeth.1226 18516045
    • Mortazavi A Williams B McCue K Schaeffer L Wold B Mapping and quantifying mammalian transcriptomes by RNA-Seq Nat Methods 2008, 5(7):621-628. 10.1038/nmeth.1226 18516045
    • (2008) Nat Methods , vol.5 , pp. 621-628
    • Mortazavi, A.1    Williams, B.2    McCue, K.3    Schaeffer, L.4    Wold, B.5
  • 5
    • 34250159524 scopus 로고    scopus 로고
    • Genome-wide mapping of in vivo protein-DNA interactions
    • 10.1126/science.1141319 17540862
    • Johnson D Mortazavi A Myers R Wold B Genome-wide mapping of in vivo protein-DNA interactions Science 2007, 316(5830):1497-1502. 10.1126/ science.1141319 17540862
    • (2007) Science , vol.316 , Issue.5830 , pp. 1497-1502
    • Johnson, D.1    Mortazavi, A.2    Myers, R.3    Wold, B.4
  • 7
    • 50849126804 scopus 로고    scopus 로고
    • High-precision, whole-genome sequencing of laboratory strains facilitates genetic studies
    • 2474695 18670626 10.1371/journal.pgen.1000139
    • Srivatsan A Han Y Peng J Tehranchi A Gibbs R Wang J Chen R High-precision, whole-genome sequencing of laboratory strains facilitates genetic studies PLoS Genet 2008, 4(8):e1000139. 2474695 18670626 10.1371/journal.pgen.1000139
    • (2008) PLoS Genet , vol.4 , Issue.8
    • Srivatsan, A.1    Han, Y.2    Peng, J.3    Tehranchi, A.4    Gibbs, R.5    Wang, J.6    Chen, R.7
  • 9
    • 0024281402 scopus 로고
    • Multiplex DNA sequencing
    • 10.1126/science.3353714 3353714
    • Church G Kieffer-Higgins S Multiplex DNA sequencing Science 1988, 240(4849):185-188. 10.1126/science.3353714 3353714
    • (1988) Science , vol.240 , Issue.4849 , pp. 185-188
    • Church, G.1    Kieffer-Higgins, S.2
  • 10
    • 34548588390 scopus 로고    scopus 로고
    • Targeted high-throughput sequencing of tagged nucleic acid samples
    • 1976447 17670798 10.1093/nar/gkm566
    • Meyer M Stenzel U Myles S Prüfer K Hofreiter M Targeted high-throughput sequencing of tagged nucleic acid samples Nucleic Acids Res 2007, 35(15):e97. 1976447 17670798 10.1093/nar/gkm566
    • (2007) Nucleic Acids Res , vol.35 , Issue.15
    • Meyer, M.1    Stenzel, U.2    Myles, S.3    Prüfer, K.4    Hofreiter, M.5
  • 14
    • 34249026300 scopus 로고    scopus 로고
    • High-resolution profiling of histone methylations in the human genome
    • 10.1016/j.cell.2007.05.009 17512414
    • Barski A Cuddapah S Cui K Roh T Schones D Wang Z Wei G Chepelev I Zhao K High-resolution profiling of histone methylations in the human genome Cell 2007, 129(4):823-837. 10.1016/j.cell.2007.05.009 17512414
    • (2007) Cell , vol.129 , Issue.4 , pp. 823-837
    • Barski, A.1    Cuddapah, S.2    Cui, K.3    Roh, T.4    Schones, D.5    Wang, Z.6    Wei, G.7    Chepelev, I.8    Zhao, K.9
  • 16
    • 0032483564 scopus 로고    scopus 로고
    • Cse4p is a component of the core centromere of Saccharomyces cerevisiae
    • 10.1016/S0092-8674(00)81602-5 9741625
    • Meluh P Yang P Glowczewski L Koshland D Smith M Cse4p is a component of the core centromere of Saccharomyces cerevisiae Cell 1998, 94(5):607-613. 10.1016/S0092-8674(00)81602-5 9741625
    • (1998) Cell , vol.94 , Issue.5 , pp. 607-613
    • Meluh, P.1    Yang, P.2    Glowczewski, L.3    Koshland, D.4    Smith, M.5
  • 17
    • 3242703137 scopus 로고    scopus 로고
    • Functional complementation of human centromere protein A (CENP-A) by Cse4p from Saccharomyces cerevisiae
    • 444843 15254229 10.1128/MCB.24.15.6620-6630.2004
    • Wieland G Orthaus S Ohndorf S Diekmann S Hemmerich P Functional complementation of human centromere protein A (CENP-A) by Cse4p from Saccharomyces cerevisiae Mol Cell Biol 2004, 24(15):6620-6630. 444843 15254229 10.1128/MCB.24.15.6620-6630.2004
    • (2004) Mol Cell Biol , vol.24 , Issue.15 , pp. 6620-6630
    • Wieland, G.1    Orthaus, S.2    Ohndorf, S.3    Diekmann, S.4    Hemmerich, P.5
  • 18
    • 0033756555 scopus 로고    scopus 로고
    • CSE4 genetically interacts with the Saccharomyces cerevisiae centromere DNA elements CDE I and CDE II but not CDE III. Implications for the path of the centromere dna around a cse4p variant nucleosome
    • 1461345 11063678
    • Keith K Fitzgerald-Hayes M CSE4 genetically interacts with the Saccharomyces cerevisiae centromere DNA elements CDE I and CDE II but not CDE III. Implications for the path of the centromere dna around a cse4p variant nucleosome Genetics 2000, 156(3):973-981. 1461345 11063678
    • (2000) Genetics , vol.156 , Issue.3 , pp. 973-981
    • Keith, K.1    Fitzgerald-Hayes, M.2
  • 19
    • 34250316190 scopus 로고    scopus 로고
    • Scm3 is essential to recruit the histone h3 variant cse4 to centromeres and to maintain a functional kinetochore
    • 10.1016/j.molcel.2007.05.013 17569568
    • Camahort R Li B Florens L Swanson S Washburn M Gerton J Scm3 is essential to recruit the histone h3 variant cse4 to centromeres and to maintain a functional kinetochore Mol Cell 2007, 26(6):853-865. 10.1016/ j.molcel.2007.05.013 17569568
    • (2007) Mol Cell , vol.26 , Issue.6 , pp. 853-865
    • Camahort, R.1    Li, B.2    Florens, L.3    Swanson, S.4    Washburn, M.5    Gerton, J.6
  • 20
    • 34250173486 scopus 로고    scopus 로고
    • Nonhistone Scm3 and histones CenH3-H4 assemble the core of centromere-specific nucleosomes
    • 10.1016/j.cell.2007.04.026 17574026
    • Mizuguchi G Xiao H Wisniewski J Smith M Wu C Nonhistone Scm3 and histones CenH3-H4 assemble the core of centromere-specific nucleosomes Cell 2007, 129(6):1153-1164. 10.1016/j.cell.2007.04.026 17574026
    • (2007) Cell , vol.129 , Issue.6 , pp. 1153-1164
    • Mizuguchi, G.1    Xiao, H.2    Wisniewski, J.3    Smith, M.4    Wu, C.5
  • 21
    • 34547112848 scopus 로고    scopus 로고
    • Scm3, an essential Saccharomyces cerevisiae centromere protein required for G2/M progression and Cse4 localization
    • 1885823 17548816 10.1073/pnas.0703178104
    • Stoler S Rogers K Weitze S Morey L Fitzgerald-Hayes M Baker R Scm3, an essential Saccharomyces cerevisiae centromere protein required for G2/M progression and Cse4 localization Proc Natl Acad Sci USA 2007, 104(25):10571-10576. 1885823 17548816 10.1073/pnas.0703178104
    • (2007) Proc Natl Acad Sci USA , vol.104 , Issue.25 , pp. 10571-10576
    • Stoler, S.1    Rogers, K.2    Weitze, S.3    Morey, L.4    Fitzgerald-Hayes, M.5    Baker, R.6
  • 22
    • 34249995415 scopus 로고    scopus 로고
    • A specialized nucleosome has a "point" to make
    • 10.1016/j.cell.2007.05.054 17574019
    • Zhang W Mellone B Karpen G A specialized nucleosome has a "point" to make Cell 2007, 129(6):1047-1049. 10.1016/ j.cell.2007.05.054 17574019
    • (2007) Cell , vol.129 , Issue.6 , pp. 1047-1049
    • Zhang, W.1    Mellone, B.2    Karpen, G.3
  • 23
    • 28644448227 scopus 로고    scopus 로고
    • De novo kinetochore assembly requires the centromeric histone H3 variant
    • 1289410 1289410 16207811 10.1091/mbc.E05-08-0771
    • Collins K Castillo A Tatsutani S Biggins S De novo kinetochore assembly requires the centromeric histone H3 variant Mol Biol Cell 2005, 16(12):5649-5660. 1289410 16207811 10.1091/mbc.E05-08-0771
    • (2005) Mol Biol Cell , vol.16 , Issue.12 , pp. 5649-5660
    • Collins, K.1    Castillo, A.2    Tatsutani, S.3    Biggins, S.4
  • 24
    • 0037007126 scopus 로고    scopus 로고
    • Chromatin assembly: The kinetochore connection
    • 10.1016/S0960-9822(02)00786-8 11937044
    • Krude T Chromatin assembly: The kinetochore connection Curr Biol 2002, 12(7):R256-258. 10.1016/S0960-9822(02)00786-8 11937044
    • (2002) Curr Biol , vol.12 , Issue.7
    • Krude, T.1
  • 25
    • 0030026561 scopus 로고    scopus 로고
    • A novel histone H4 mutant defective in nuclear division and mitotic chromosome transmission
    • 231084 231084 8622646
    • Smith M Yang P Santisteban M Boone P Goldstein A Megee P A novel histone H4 mutant defective in nuclear division and mitotic chromosome transmission Mol Cell Biol 1996, 16(3):1017-1026. 231084 8622646
    • (1996) Mol Cell Biol , vol.16 , Issue.3 , pp. 1017-1026
    • Smith, M.1    Yang, P.2    Santisteban, M.3    Boone, P.4    Goldstein, A.5    Megee, P.6
  • 26
    • 0242266928 scopus 로고    scopus 로고
    • Architecture of the budding yeast kinetochore reveals a conserved molecular core
    • 2173538 14581449 10.1083/jcb.200305100
    • Westermann S Cheeseman I Anderson S Yates Jr Drubin D Barnes G Architecture of the budding yeast kinetochore reveals a conserved molecular core J Cell Biol 2003, 163(2):215-222. 2173538 14581449 10.1083/jcb.200305100
    • (2003) J Cell Biol , vol.163 , Issue.2 , pp. 215-222
    • Westermann, S.1    Cheeseman, I.2    Anderson, S.3    Yates, Jr.4    Drubin, D.5    Barnes, G.6
  • 27
    • 52049119574 scopus 로고    scopus 로고
    • Altered dosage and mislocalization of histone H3 and Cse4p lead to chromosome loss in Saccharomyces cerevisiae
    • 2390605 18458100 10.1534/genetics.108.088518
    • Au W Crisp M DeLuca S Rando O Basrai M Altered dosage and mislocalization of histone H3 and Cse4p lead to chromosome loss in Saccharomyces cerevisiae Genetics 2008, 179(1):263-275. 2390605 18458100 10.1534/genetics.108.088518
    • (2008) Genetics , vol.179 , Issue.1 , pp. 263-275
    • Au, W.1    Crisp, M.2    DeLuca, S.3    Rando, O.4    Basrai, M.5
  • 28
    • 34247890046 scopus 로고    scopus 로고
    • The overexpression of a Saccharomyces cerevisiae centromeric histone H3 variant mutant protein leads to a defect in kinetochore biorientation
    • 1800591 17151247 10.1534/genetics.106.064410
    • Collins K Camahort R Seidel C Gerton J Biggins S The overexpression of a Saccharomyces cerevisiae centromeric histone H3 variant mutant protein leads to a defect in kinetochore biorientation Genetics 2007, 175(2):513-525. 1800591 17151247 10.1534/genetics.106.064410
    • (2007) Genetics , vol.175 , Issue.2 , pp. 513-525
    • Collins, K.1    Camahort, R.2    Seidel, C.3    Gerton, J.4    Biggins, S.5
  • 29
    • 0024724818 scopus 로고
    • STE12, a protein involved in cell-type-specific transcription and signal transduction in yeast, is part of protein-DNA complexes
    • 10.1101/gad.3.9.1349 2558054
    • Errede B Ammerer G STE12, a protein involved in cell-type-specific transcription and signal transduction in yeast, is part of protein-DNA complexes Genes Dev 1989, 3(9):1349-1361. 10.1101/gad.3.9.1349 2558054
    • (1989) Genes Dev , vol.3 , Issue.9 , pp. 1349-1361
    • Errede, B.1    Ammerer, G.2
  • 30
    • 0031042444 scopus 로고    scopus 로고
    • Combinatorial control required for the specificity of yeast MAPK signaling
    • 10.1126/science.275.5304.1314 9036858
    • Madhani H Fink G Combinatorial control required for the specificity of yeast MAPK signaling Science 1997, 275(5304):1314-1317. 10.1126/ science.275.5304.1314 9036858
    • (1997) Science , vol.275 , Issue.5304 , pp. 1314-1317
    • Madhani, H.1    Fink, G.2
  • 31
    • 0028670651 scopus 로고
    • Elements of a single MAP kinase cascade in Saccharomyces cerevisiae mediate two developmental programs in the same cell type: Mating and invasive growth
    • 10.1101/gad.8.24.2974 8001818
    • Roberts R Fink G Elements of a single MAP kinase cascade in Saccharomyces cerevisiae mediate two developmental programs in the same cell type: Mating and invasive growth Genes Dev 1994, 8(24):2974-2985. 10.1101/gad.8.24.2974 8001818
    • (1994) Genes Dev , vol.8 , Issue.24 , pp. 2974-2985
    • Roberts, R.1    Fink, G.2
  • 32
    • 33745432883 scopus 로고    scopus 로고
    • Regulation of mating and filamentation genes by two distinct Ste12 complexes in Saccharomyces cerevisiae
    • 1489142 16782869 10.1128/MCB.02053-05
    • Chou S Lane S Liu H Regulation of mating and filamentation genes by two distinct Ste12 complexes in Saccharomyces cerevisiae Mol Cell Biol 2006, 26(13):4794-4805. 1489142 16782869 10.1128/MCB.02053-05
    • (2006) Mol Cell Biol , vol.26 , Issue.13 , pp. 4794-4805
    • Chou, S.1    Lane, S.2    Liu, H.3
  • 33
    • 0036777623 scopus 로고    scopus 로고
    • Dual role of the Saccharomyces cerevisiae TEA/ATTS family transcription factor Tec1p in regulation of gene expression and cellular development
    • 126755 12455687 10.1128/EC.1.5.673-686.2002
    • Köhler T Wesche S Taheri N Braus G Mösch H Dual role of the Saccharomyces cerevisiae TEA/ATTS family transcription factor Tec1p in regulation of gene expression and cellular development Eukaryot Cell 2002, 1(5):673-686. 126755 12455687 10.1128/EC.1.5.673-686.2002
    • (2002) Eukaryot Cell , vol.1 , Issue.5 , pp. 673-686
    • Köhler, T.1    Wesche, S.2    Taheri, N.3    Braus, G.4    Mösch, H.5
  • 34
    • 0344690152 scopus 로고    scopus 로고
    • Cyclic AMP-dependent protein kinase regulates pseudohyphal differentiation in Saccharomyces cerevisiae
    • 84286 10373537
    • Pan X Heitman J Cyclic AMP-dependent protein kinase regulates pseudohyphal differentiation in Saccharomyces cerevisiae Mol Cell Biol 1999, 19(7):4874-4887. 84286 10373537
    • (1999) Mol Cell Biol , vol.19 , pp. 4874-4887
    • Pan, X.1    Heitman, J.2
  • 35
    • 0033105258 scopus 로고    scopus 로고
    • MAP kinase and cAMP filamentation signaling pathways converge on the unusually large promoter of the yeast FLO11 gene
    • 1171216 10064592 10.1093/emboj/18.5.1257
    • Rupp S Summers E Lo H Madhani H Fink G MAP kinase and cAMP filamentation signaling pathways converge on the unusually large promoter of the yeast FLO11 gene EMBO J 1999, 18(5):1257-1269. 1171216 10064592 10.1093/emboj/ 18.5.1257
    • (1999) EMBO J , vol.18 , Issue.5 , pp. 1257-1269
    • Rupp, S.1    Summers, E.2    Lo, H.3    Madhani, H.4    Fink, G.5
  • 36
    • 32644449540 scopus 로고    scopus 로고
    • Target hub proteins serve as master regulators of development in yeast
    • 1369046 16449570 10.1101/gad.1389306
    • Borneman A Leigh-Bell J Yu H Bertone P Gerstein M Snyder M Target hub proteins serve as master regulators of development in yeast Genes Dev 2006, 20(4):435-448. 1369046 16449570 10.1101/gad.1389306
    • (2006) Genes Dev , vol.20 , Issue.4 , pp. 435-448
    • Borneman, A.1    Leigh-Bell, J.2    Yu, H.3    Bertone, P.4    Gerstein, M.5    Snyder, M.6
  • 37
  • 38
    • 0032486241 scopus 로고    scopus 로고
    • The mating factor response pathway regulates transcription of TEC1, a gene involved in pseudohyphal differentiation of Saccharomyces cerevisiae
    • 10.1016/S0014-5793(98)00568-7 9657388
    • Oehlen L Cross F The mating factor response pathway regulates transcription of TEC1, a gene involved in pseudohyphal differentiation of Saccharomyces cerevisiae FEBS Lett 1998, 429(1):83-88. 10.1016/ S0014-5793(98)00568-7 9657388
    • (1998) FEBS Lett , vol.429 , Issue.1 , pp. 83-88
    • Oehlen, L.1    Cross, F.2
  • 39
    • 11144340454 scopus 로고    scopus 로고
    • Fus3-regulated Tec1 degradation through SCFCdc4 determines MAPK signaling specificity during mating in yeast
    • 10.1016/j.cell.2004.11.053 15620356
    • Chou S Huang L Liu H Fus3-regulated Tec1 degradation through SCFCdc4 determines MAPK signaling specificity during mating in yeast Cell 2004, 119(7):981-990. 10.1016/j.cell.2004.11.053 15620356
    • (2004) Cell , vol.119 , Issue.7 , pp. 981-990
    • Chou, S.1    Huang, L.2    Liu, H.3
  • 40
    • 49449089896 scopus 로고    scopus 로고
    • Fus3-triggered Tec1 degradation modulates mating transcriptional output during the pheromone response
    • 2538907 18682702 10.1038/msb.2008.47
    • Chou S Zhao S Song Y Liu H Nie Q Fus3-triggered Tec1 degradation modulates mating transcriptional output during the pheromone response Mol Syst Biol 2008, 4:212. 2538907 18682702 10.1038/msb.2008.47
    • (2008) Mol Syst Biol , vol.4 , pp. 212
    • Chou, S.1    Zhao, S.2    Song, Y.3    Liu, H.4    Nie, Q.5
  • 42
    • 0030950138 scopus 로고    scopus 로고
    • Characterization of the basal and pheromone-stimulated phosphorylation states of Ste12p
    • 10.1111/j.1432-1033.1997.00241.x 9151949
    • Hung W Olson K Breitkreutz A Sadowski I Characterization of the basal and pheromone-stimulated phosphorylation states of Ste12p Eur J Biochem 1997, 245(2):241-251. 10.1111/j.1432-1033.1997.00241.x 9151949
    • (1997) Eur J Biochem , vol.245 , Issue.2 , pp. 241-251
    • Hung, W.1    Olson, K.2    Breitkreutz, A.3    Sadowski, I.4
  • 43
    • 1642458095 scopus 로고    scopus 로고
    • A conserved protein interaction network involving the yeast MAP kinases Fus3 and Kss1
    • 2172336 14734536 10.1083/jcb.200310021
    • Kusari A Molina D Sabbagh WJ Lau C Bardwell L A conserved protein interaction network involving the yeast MAP kinases Fus3 and Kss1 J Cell Biol 2004, 164(2):267-277. 2172336 14734536 10.1083/jcb.200310021
    • (2004) J Cell Biol , vol.164 , Issue.2 , pp. 267-277
    • Kusari, A.1    Molina, D.2    Sabbagh, W.J.3    Lau, C.4    Bardwell, L.5
  • 44
    • 0037426868 scopus 로고    scopus 로고
    • Srb10/Cdk8 regulates yeast filamentous growth by phosphorylating the transcription factor Ste12
    • 10.1038/nature01243 12520306
    • Nelson C Goto S Lund K Hung W Sadowski I Srb10/Cdk8 regulates yeast filamentous growth by phosphorylating the transcription factor Ste12 Nature 2003, 421(6919):187-190. 10.1038/nature01243 12520306
    • (2003) Nature , vol.421 , Issue.6919 , pp. 187-190
    • Nelson, C.1    Goto, S.2    Lund, K.3    Hung, W.4    Sadowski, I.5
  • 45
    • 0025764889 scopus 로고
    • Pheromone-dependent phosphorylation of the yeast STE12 protein correlates with transcriptional activation
    • 10.1101/gad.5.5.741 2026326
    • Song D Dolan J Yuan Y Fields S Pheromone-dependent phosphorylation of the yeast STE12 protein correlates with transcriptional activation Genes Dev 1991, 5(5):741-750. 10.1101/gad.5.5.741 2026326
    • (1991) Genes Dev , vol.5 , Issue.5 , pp. 741-750
    • Song, D.1    Dolan, J.2    Yuan, Y.3    Fields, S.4
  • 46
    • 33644856538 scopus 로고    scopus 로고
    • Pheromone-regulated sumoylation of transcription factors that mediate the invasive to mating developmental switch in yeast
    • 10.1074/jbc.M508985200 16306045
    • Wang Y Dohlman H Pheromone-regulated sumoylation of transcription factors that mediate the invasive to mating developmental switch in yeast J Biol Chem 2006, 281(4):1964-1969. 10.1074/jbc.M508985200 16306045
    • (2006) J Biol Chem , vol.281 , Issue.4 , pp. 1964-1969
    • Wang, Y.1    Dohlman, H.2
  • 47
    • 0025739871 scopus 로고
    • RNA polymerase II
    • 10.1146/annurev.bi.60.070191.003353 1883205
    • Young R RNA polymerase II Annu Rev Biochem 1991, 60:689-715. 10.1146/ annurev.bi.60.070191.003353 1883205
    • (1991) Annu Rev Biochem , vol.60 , pp. 689-715
    • Young, R.1
  • 48
    • 0031840672 scopus 로고    scopus 로고
    • Molecular genetics of the RNA polymerase II general transcriptional machinery
    • 98922 9618449
    • Hampsey M Molecular genetics of the RNA polymerase II general transcriptional machinery Microbiol Mol Biol Rev 1998, 62(2):465-503. 98922 9618449
    • (1998) Microbiol Mol Biol Rev , vol.62 , Issue.2 , pp. 465-503
    • Hampsey, M.1
  • 49
    • 0032428149 scopus 로고    scopus 로고
    • RNA polymerase subunit RPB5 plays a role in transcriptional activation
    • 28034 9860960 10.1073/pnas.95.26.15281
    • Miyao T Woychik N RNA polymerase subunit RPB5 plays a role in transcriptional activation Proc Natl Acad Sci USA 1998, 95(26):15281-15286. 28034 9860960 10.1073/pnas.95.26.15281
    • (1998) Proc Natl Acad Sci USA , vol.95 , Issue.26 , pp. 15281-15286
    • Miyao, T.1    Woychik, N.2
  • 50
    • 38049146018 scopus 로고    scopus 로고
    • Protein characterization of Saccharomyces cerevisiae RNA polymerase II after in vivo cross-linking
    • 2148403 10.1073/pnas.0710179104
    • Tardiff D Abruzzi K Rosbash M Protein characterization of Saccharomyces cerevisiae RNA polymerase II after in vivo cross-linking Proc Natl Acad Sci USA 2007, 104(50):19948-19953. 2148403 18077427 10.1073/ pnas.0710179104
    • (2007) Proc Natl Acad Sci USA , vol.104 , Issue.50 , pp. 19948-19953
    • Tardiff, D.1    Abruzzi, K.2    Rosbash, M.3
  • 51
    • 0141625270 scopus 로고    scopus 로고
    • Genome-wide location of yeast RNA polymerase III transcription machinery
    • 212732 12970186 10.1093/emboj/cdg466
    • Harismendy O Gendrel C Soularue P Gidrol X Sentenac A Werner M Lefebvre O Genome-wide location of yeast RNA polymerase III transcription machinery EMBO J 2003, 22(18):4738-4747. 212732 12970186 10.1093/emboj/ cdg466
    • (2003) EMBO J , vol.22 , Issue.18 , pp. 4738-4747
    • Harismendy, O.1    Gendrel, C.2    Soularue, P.3    Gidrol, X.4    Sentenac, A.5    Werner, M.6    Lefebvre, O.7
  • 52
    • 2442606759 scopus 로고    scopus 로고
    • Genome-wide occupancy profile of the RNA polymerase III machinery in Saccharomyces cerevisiae reveals loci with incomplete transcription complexes
    • 400477 15121834 10.1128/MCB.24.10.4118-4127.2004
    • Moqtaderi Z Struhl K Genome-wide occupancy profile of the RNA polymerase III machinery in Saccharomyces cerevisiae reveals loci with incomplete transcription complexes Mol Cell Biol 2004, 24(10):4118-4127. 400477 15121834 10.1128/MCB.24.10.4118-4127.2004
    • (2004) Mol Cell Biol , vol.24 , Issue.10 , pp. 4118-4127
    • Moqtaderi, Z.1    Struhl, K.2
  • 53
    • 0345598934 scopus 로고    scopus 로고
    • The RNA polymerase III transcriptome revealed by genome-wide localization and activity-occupancy relationships
    • 299761 14634212 10.1073/pnas.2435566100
    • Roberts D Stewart A Huff J Cairns B The RNA polymerase III transcriptome revealed by genome-wide localization and activity-occupancy relationships Proc Natl Acad Sci USA 2003, 100(25):14695-14700. 299761 14634212 10.1073/pnas.2435566100
    • (2003) Proc Natl Acad Sci USA , vol.100 , Issue.25 , pp. 14695-14700
    • Roberts, D.1    Stewart, A.2    Huff, J.3    Cairns, B.4
  • 54
    • 33751504083 scopus 로고    scopus 로고
    • Genome-wide distribution of yeast RNA polymerase II and its control by Sen1 helicase
    • 10.1016/j.molcel.2006.10.023 17157256
    • Steinmetz E Warren C Kuehner J Panbehi B Ansari A Brow D Genome-wide distribution of yeast RNA polymerase II and its control by Sen1 helicase Mol Cell 2006, 24(5):735-746. 10.1016/j.molcel.2006.10.023 17157256
    • (2006) Mol Cell , vol.24 , Issue.5 , pp. 735-746
    • Steinmetz, E.1    Warren, C.2    Kuehner, J.3    Panbehi, B.4    Ansari, A.5    Brow, D.6
  • 55
    • 84943817322 scopus 로고
    • Error Detecting and Error Correcting Codes
    • Hamming RW Error Detecting and Error Correcting Codes Bell System technical journal 1950, 26(2):147-160.
    • (1950) Bell System Technical Journal , vol.26 , Issue.2 , pp. 147-160
    • Hamming, R.W.1
  • 58
    • 0036081355 scopus 로고    scopus 로고
    • Gene Expression Omnibus: NCBI gene expression and hybridization array data repository
    • 99122 11752295 10.1093/nar/30.1.207
    • Edgar R Domrachev M Lash A Gene Expression Omnibus: NCBI gene expression and hybridization array data repository Nucleic Acids Res 2002, 30(1):207-210. 99122 11752295 10.1093/nar/30.1.207
    • (2002) Nucleic Acids Res , vol.30 , Issue.1 , pp. 207-210
    • Edgar, R.1    Domrachev, M.2    Lash, A.3
  • 60
    • 40549107989 scopus 로고    scopus 로고
    • Chromatin immunoprecipitation for determining the association of proteins with specific genomic sequences in vivo
    • Unit 17 18228445
    • Aparicio O Geisberg J Struhl K Chromatin immunoprecipitation for determining the association of proteins with specific genomic sequences in vivo Curr Protoc Cell Biol 2004, Chapter 17:. Unit 17.17 18228445
    • (2004) Curr Protoc Cell Biol , vol.17
    • Aparicio, O.1    Geisberg, J.2    Struhl, K.3
  • 61
    • 17344392308 scopus 로고    scopus 로고
    • A new mathematical model for relative quantification in real-time RT-PCR
    • 55695 11328886 10.1093/nar/29.9.e45
    • Pfaffl M A new mathematical model for relative quantification in real-time RT-PCR Nucleic Acids Res 2001, 29(9):e45. 55695 11328886 10.1093/nar/29.9.e45
    • (2001) Nucleic Acids Res , vol.29 , Issue.9
    • Pfaffl, M.1


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