A twin-track approach has optimized proton and hydride transfer by dynamically coupled tunneling during the evolution of protochlorophyllide oxidoreductase

Journal of Biological Chemistry

Volumn 286, Issue 13, 2011, Pages 11849-11854

  Heyes, Derren J ^a   Levy, Colin ^a   Sakuma, Michiyo ^a   Robertson, David L ^a   Scrutton, Nigel S ^a  

^a UNIVERSITY OF MANCHESTER   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

ACTIVATED ENZYMES; ACTIVE SITE; CATALYTIC POWER; CATALYTIC STRUCTURE; COUPLED DYNAMICS; DYNAMIC EFFECTS; DYNAMIC PROPERTY; ENZYME CATALYSIS; EVOLUTIONARY ORIGIN; FUNCTIONAL ADAPTATION; HYDRIDE TRANSFERS; ISOTOPE EFFECT; PLANT ENZYMES; PROTEIN DYNAMICS; PROTOCHLOROPHYLLIDE OXIDOREDUCTASE; PROTON DONORS; TEMPERATURE DEPENDENCE; THERMALLY ACTIVATED;

CATALYSIS; CATALYSTS; CHLOROPHYLL; ISOTOPES; OPTIMIZATION; PROTON TRANSFER; VISCOSITY MEASUREMENT;

ENZYMES;

OXIDOREDUCTASE; PROTOCHLOROPHYLLIDE OXIDOREDUCTASE; UNCLASSIFIED DRUG;

ANION TRANSPORT; ARABIDOPSIS; ARTICLE; CATALYSIS; CYANOBACTERIUM; ENZYME ACTIVATION; GLOEOBACTER VIOLACEUS; HYDRIDE TRANSFER; MOLECULAR EVOLUTION; PRESSURE; PRIORITY JOURNAL; PROCESS OPTIMIZATION; PROTON TRANSPORT; TEMPERATURE DEPENDENCE; TRANSPORT KINETICS; VISCOSITY;

BACTERIAL PROTEINS; CYANOBACTERIA; EVOLUTION, MOLECULAR; ION TRANSPORT; OXIDOREDUCTASES ACTING ON CH-CH GROUP DONORS; PLANT PROTEINS; PLANTS; PROTONS;

CYANOBACTERIA; GLOEOBACTER VIOLACEUS;

EID: 79953218084     PISSN: 00219258     EISSN: 1083351X     Source Type: Journal    
DOI: 10.1074/jbc.M111.219626     Document Type: Article

References (34)

1. Eisenmesser, E. Z., Bosco, D. A., Akke, M., and Kern, D. (2002) Science 295, 1520-1523
2. Benkovic, S. J., and Hammes-Schiffer, S. (2003) Science 301, 1196-1202
3. Garcia-Viloca, M., Gao, J., Karplus, M., and Truhlar, D. G. (2004) Science 303, 186-195
4. Masgrau, L., Roujeinikova, A., Johannissen, L. O., Hothi, P., Basran, J., Ranaghan, K. E., Mulholland, A. J., Sutcliffe, M. J., Scrutton, N. S., and Leys, D. (2006) Science 312, 237-241
5. Henzler-Wildman, K., and Kern, D. (2007) Nature 450, 964-972
6. Yahashiri, A., Howell, E. E., and Kohen, A. (2008) ChemPhysChem 9, 980-982
7. Nagel, Z. D., and Klinman, J. P. (2009) Nat. Chem. Biol. 5, 543-550
8. Bandaria, J. N., Cheatum, C. M., and Kohen, A. (2009) J. Am. Chem. Soc. 131, 10151-10155
9. Heyes, D. J., Sakuma, M., and Scrutton, N. S. (2009) Angew. Chem. Int. Ed. Engl. 48, 3850-3853
10. Pisliakov, A. V., Cao, J., Kamerlin, S. C., and Warshel, A. (2009) Proc. Natl. Acad. Sci. U.S.A. 106, 17359-17364
11. Heyes, D. J., and Hunter, C. N. (2005) Trends Biochem. Sci. 30, 642-649
12. Heyes, D. J., Sakuma, M., de Visser, S. P., and Scrutton, N. S. (2009) J. Biol. Chem. 284, 3762-3767
13. Masuda, T., and Takamiya, K. (2004) Photosynth. Res. 81, 1-29
14. Heyes, D. J., Heathcote, P., Rigby, S. E., Palacios, M. A., van Grondelle, R., and Hunter, C. N. (2006) J. Biol. Chem. 281, 26847-26853
15. Menon, B. R., Waltho, J. P., Scrutton, N. S., and Heyes, D. J. (2009) J. Biol. Chem. 284, 18160-18166
16. Sytina, O. A., Heyes, D. J., Hunter, C. N., Alexandre, M. T., van Stokkum, I. H., van Grondelle, R., and Groot, M. L. (2008) Nature 456, 1001-1004
17. Durin, G., Delaunay, A., Darnault, C., Heyes, D. J., Royant, A., Vernede, X., Hunter, C. N., Weik, M., and Bourgeois, D. (2009) Biophys. J. 96, 1902-1910
18. Heyes, D. J., Sakuma, M., and Scrutton, N. S. (2007) J. Biol. Chem. 282, 32015-32020
19. Suzuki, J. Y., and Bauer, C. E. (1995) Proc. Natl. Acad. Sci. U.S.A. 92, 3749-3753
20. Pudney, C. R., Hay, S., Sutcliffe, M. J., and Scrutton, N. S. (2006) J. Am. Chem. Soc. 128, 14053-14058
21. Ansari, A., Jones, C. M., Henry, E. R., Hofrichter, J., and Eaton, W. A. (1992) Science 256, 1796-1798
22. Townley, H. E., Sessions, R. B., Clarke, A. R., Dafforn, T. R., and Griffiths, W. T. (2001) Proteins 44, 329-335
23. Nelissen, B., Van de Peer, Y., Wilmotte, A., and De Wachter, R. (1995) Mol. Biol. Evol. 12, 1166-1173
24. Gupta, R. S., and Mathews, D. W. (2010) BMC Evol. Biol. 10, 24
25. Kuznetsov, A. M., and Ulstrup, J. (1999) Can. J. Chem. 77, 1085-1096
26. Knapp, M. J., Rickert, K., and Klinman, J. P. (2002) J. Am. Chem. Soc. 124, 3865-3874
27. Knapp, M. J., and Klinman, J. P. (2002) Eur. J. Biochem. 269, 3113-3121
28. Johannissen, L. O., Hay, S., Scrutton, N. S., and Sutcliffe, M. J. (2007) J. Phys. Chem. B 111, 2631-2638
29. Masgrau, L., Basran, J., Hothi, P., Sutcliffe, M. J., and Scrutton, N. S. (2004) Arch. Biochem. Biophys. 428, 41-51
30. Fenimore, P. W., Frauenfelder, H., McMahon, B. H., and Parak, F. G. (2002) Proc. Natl. Acad. Sci. U.S.A. 99, 16047-16051
31. Fenimore, P. W., Frauenfelder, H., McMahon, B. H., and Young, R. D. (2004) Proc. Natl. Acad. Sci. U.S.A. 101, 14408-14413
32. Samuni, U., Roche, C. J., Dantsker, D., and Friedman, J. M. (2007) J. Am. Chem. Soc. 129, 12756-12764
33. Lebedev, N., Karginova, O., McIvor, W., and Timko, M. P. (2001) Biochemistry 40, 12562-12574
34. Menon, B. R., Davison, P. A., Hunter, C. N., Scrutton, N. S., and Heyes, D. J. (2010) J. Biol. Chem. 285, 2113-2119