-
1
-
-
33748633480
-
Electrostatic basis for enzyme catalysis
-
Warshel A, et al. (2006) Electrostatic basis for enzyme catalysis. Chem Rev 106:3210-3235.
-
(2006)
Chem Rev
, vol.106
, pp. 3210-3235
-
-
Warshel, A.1
-
2
-
-
0031575408
-
Energetics of nucleophile activation in a protein tyrosine phosphatase
-
DOI 10.1006/jmbi.1996.0716
-
Hansson T, Nordlund P, Åqvist J (1997) Energetics of nucleophile activation in a protein tyrosine phosphatase. J Mol Biol 265:118-127. (Pubitemid 27110651)
-
(1997)
Journal of Molecular Biology
, vol.265
, Issue.2
, pp. 118-127
-
-
Hansson, T.1
Nordlund, P.2
Aqvist, J.3
-
3
-
-
4744372692
-
Out of hot water
-
Akke M (2004) Out of hot water. Nat Struct Mol Biol 11:912-913.
-
(2004)
Nat Struct Mol Biol
, vol.11
, pp. 912-913
-
-
Akke, M.1
-
4
-
-
33748781457
-
The dynamic energy landscape of dihydrofolate reductase catalysis
-
DOI 10.1126/science.1130258
-
Boehr DD, McElheny D, Dyson HJ, Wright PE (2006) The dynamic energy landscape of dihydrofolate reductase catalysis. Science 313:1638-1642. (Pubitemid 44414038)
-
(2006)
Science
, vol.313
, Issue.5793
, pp. 1638-1642
-
-
Boehr, D.D.1
McElheny, D.2
Dyson, H.J.3
Wrightt, P.E.4
-
5
-
-
27744499156
-
Intrinsic dynamcs of an enzyme underlies catalysis
-
Eisenmesser EZ, et al. (2005) Intrinsic dynamcs of an enzyme underlies catalysis. Nature 438:117-121.
-
(2005)
Nature
, vol.438
, pp. 117-121
-
-
Eisenmesser, E.Z.1
-
6
-
-
36849048228
-
Intrinsic motions along an enzymatic reaction trajectory
-
Henzler-Wildman KA, et al. (2007) Intrinsic motions along an enzymatic reaction trajectory. Nature 450:838-844.
-
(2007)
Nature
, vol.450
, pp. 838-844
-
-
Henzler-Wildman, K.A.1
-
7
-
-
36849039429
-
A hierarchy of timescales in protein dynamics is linked to enzyme catalysis
-
Henzler-Wildman KA, et al. (2007) A hierarchy of timescales in protein dynamics is linked to enzyme catalysis. Nature 450:913-916.
-
(2007)
Nature
, vol.450
, pp. 913-916
-
-
Henzler-Wildman, K.A.1
-
8
-
-
0036815758
-
NMR methods for characterizing microsecond to millisecond dynamics in recognition and catalysis
-
Akke M (2002) NMR methods for characterizing microsecond to millisecond dynamics in recognition and catalysis. Curr Opin Struct Biol 12:642-647.
-
(2002)
Curr Opin Struct Biol
, vol.12
, pp. 642-647
-
-
Akke, M.1
-
9
-
-
33646935697
-
Dynamical contributions to enzyme catalysis: Critical tests of a popular hypothesis
-
Olsson MHM, Parson WW, Warshel A (2006) Dynamical contributions to enzyme catalysis: Critical tests of a popular hypothesis. Chem Rev 106:1737-1756.
-
(2006)
Chem Rev
, vol.106
, pp. 1737-1756
-
-
Olsson, M.H.M.1
Parson, W.W.2
Warshel, A.3
-
10
-
-
52949128744
-
On the relationship between folding and chemical landscapes in enzyme catalysis
-
Roca M, Messer B, Hilvert D, Warshel A (2008) On the relationship between folding and chemical landscapes in enzyme catalysis. Proc Natl Acad Sci USA 105:13877-13882.
-
(2008)
Proc Natl Acad Sci USA
, vol.105
, pp. 13877-13882
-
-
Roca, M.1
Messer, B.2
Hilvert, D.3
Warshel, A.4
-
11
-
-
35348942279
-
Allosteric Communication in Dihydrofolate Reductase: Signaling Network and Pathways for Closed to Occluded Transition and Back
-
DOI 10.1016/j.jmb.2007.08.047, PII S0022283607010856
-
Chen J, Dima RI, Thirumalai D (2007) Allosteric communcation in dihydrofolate reductase: Signaling network and pathways for closed to occluded transition and back. J Mol Biol 374:250-266. (Pubitemid 47600224)
-
(2007)
Journal of Molecular Biology
, vol.374
, Issue.1
, pp. 250-266
-
-
Chen, J.1
Dima, R.I.2
Thirumalai, D.3
-
12
-
-
34249104188
-
The catalytic effect of dihydrofolate reductase and its mutants is determined by reorganization energies
-
DOI 10.1021/bi700201w
-
Liu H, Warshel A (2007) The catalytic effect of dihydrofolate reductase and its mutants is determined by reorganization energies. Biochemistry 46:6011-6025. (Pubitemid 46799163)
-
(2007)
Biochemistry
, vol.46
, Issue.20
, pp. 6011-6025
-
-
Liu, H.1
Warshel, A.2
-
13
-
-
0016610491
-
Computer simulation of protein folding
-
Levitt M, Warshel A (1975) Computer simulation of protein folding. Nature 253:694-698.
-
(1975)
Nature
, vol.253
, pp. 694-698
-
-
Levitt, M.1
Warshel, A.2
-
14
-
-
4744343045
-
Linkage between dynamics and catalysis in a thermophilic-mesophilic enzyme pair
-
DOI 10.1038/nsmb821
-
Wolf-Watz M, et al. (2004) Linkage between dynamics and catalysis in a thermophilic-mesophilic enzyme pair. Nat Struct Mol Biol 11:945-949. (Pubitemid 39315297)
-
(2004)
Nature Structural and Molecular Biology
, vol.11
, Issue.10
, pp. 945-949
-
-
Wolf-Watz, M.1
Thai, V.2
Henzler-Wildman, K.3
Hadjipavlou, G.4
Eisenmesser, E.Z.5
Kern, D.6
-
15
-
-
36449006073
-
Positional time correlation function for one-dimensional systems with barrier crossing: Memory function corrections to the optimized Rouse-Zimm approximation
-
Perico A, Pratolongo R, Freed KF, Pastor RW, Szabo A (1993) Positional time correlation function for one-dimensional systems with barrier crossing: Memory function corrections to the optimized Rouse-Zimm approximation. J Chem Phys 98:564-573.
-
(1993)
J Chem Phys
, vol.98
, pp. 564-573
-
-
Perico, A.1
Pratolongo, R.2
Freed, K.F.3
Pastor, R.W.4
Szabo, A.5
-
16
-
-
34547348810
-
Measuring conformational dynamics: A new FCS-FRET approach
-
DOI 10.1021/jp070659s
-
Torres T, Levitus M (2007) Measuring conformational dynamics: A new FCS-FRET approach. J Phys Chem B 111:7392-7400. (Pubitemid 47152528)
-
(2007)
Journal of Physical Chemistry B
, vol.111
, Issue.25
, pp. 7392-7400
-
-
Torres, T.1
Levitus, M.2
-
17
-
-
38749105098
-
Two-dimensional reaction free energy surfaces of catalytic reaction: Effects of protein conformational dynamics on enzyme catalysis
-
DOI 10.1021/jp076533c
-
Min W, Xie S, Bagchi B (2008) Two-dimensional reaction free energy surfaces of catalytic reaction: Effects of protein conformational dynamics on enzyme catalysis. J Phys Chem B 112:454-466. (Pubitemid 351184620)
-
(2008)
Journal of Physical Chemistry B
, vol.112
, Issue.2
, pp. 454-466
-
-
Min, W.1
Xie, X.S.2
Bagchi, B.3
-
18
-
-
0001849456
-
How do we explore the energy landscape for function
-
eds Frauenfelder H, Deisenhofer J, Wolynes PG (Dahlem Univ Press, Berlin)
-
Nienhaus GU (1999) How do we explore the energy landscape for function. Simplicity and Complexity in Proteins and Nucleic Acids, eds Frauenfelder H, Deisenhofer J, Wolynes PG (Dahlem Univ Press, Berlin), pp 39-57.
-
(1999)
Simplicity and Complexity in Proteins and Nucleic Acids
, pp. 39-57
-
-
Nienhaus, G.U.1
-
20
-
-
33748799981
-
Dynamic visions of enzymatic reactions
-
Vendruscolo M, Dobson CM (2006) Dynamic visions of enzymatic reactions. Science 313:1586-1587.
-
(2006)
Science
, vol.313
, pp. 1586-1587
-
-
Vendruscolo, M.1
Dobson, C.M.2
-
21
-
-
34147213066
-
Evidence for wavelike energy transfer through quantum coherence in photosynthetic systems
-
Engel GS, et al. (2007) Evidence for wavelike energy transfer through quantum coherence in photosynthetic systems. Nature 446:782-786.
-
(2007)
Nature
, vol.446
, pp. 782-786
-
-
Engel, G.S.1
|