-
1
-
-
0037067641
-
Evolution of the gene network underlying wing polyphenism in ants
-
DOI 10.1126/science.1071468
-
Abouheif E, Wray GA. 2002. Evolution of the gene network underlying wing polyphenism in ants. Science 297:249-52. (Pubitemid 34761286)
-
(2002)
Science
, vol.297
, Issue.5579
, pp. 249-252
-
-
Abouheif, E.1
Wray, G.A.2
-
2
-
-
0036404889
-
Nontargeted metabolome analysis by use of Fourier Transform Ion Cyclotron Mass Spectrometry
-
Aharoni A, Ric de Vos CH, Verhoeven HA, Maliepaard CA, Kruppa G, Bino R, Goodenowe DB. 2002. Nontargeted metabolome analysis by use of Fourier Transform Ion Cyclotron Mass Spectrometry. OMICS 6:217-34. (Pubitemid 35278415)
-
(2002)
OMICS A Journal of Integrative Biology
, vol.6
, Issue.3
, pp. 217-234
-
-
Aharoni, A.1
De Vos, C.H.R.2
Verhoeven, H.A.3
Maliepaard, C.A.4
Kruppa, G.5
Bino, R.6
Goodenowe, D.B.7
-
3
-
-
0034721164
-
Error and attack tolerance of complex networks
-
DOI 10.1038/35019019
-
Albert R, Jeong H, Barabasi AL. 2000. Error and attack tolerance of complex networks. Nature 406:378-82. (Pubitemid 30625551)
-
(2000)
Nature
, vol.406
, Issue.6794
, pp. 378-382
-
-
Albert, R.1
Jeong, H.2
Barabasi, A.-L.3
-
4
-
-
0037686112
-
The topology of the regulatory interactions predicts the expression pattern of the segment polarity genes in Drosophila melanogaster
-
DOI 10.1016/S0022-5193(03)00035-3
-
Albert R, Othmer HG. 2003. The topology of the regulatory interactions predicts the expression pattern of the segment polarity genes in Drosophila melanogaster. J Theor Biol 223:1-18. (Pubitemid 36627542)
-
(2003)
Journal of Theoretical Biology
, vol.223
, Issue.1
, pp. 1-18
-
-
Albert, R.1
Othmer, H.G.2
-
5
-
-
0032489015
-
The cell as a collection of protein machines: Preparing the next generation of molecular biologists
-
DOI 10.1016/S0092-8674(00)80922-8
-
Alberts B. 1998. The cell as a collection of protein machines: preparing the next generation of molecular biologists. Cell 92:291-4. (Pubitemid 28093007)
-
(1998)
Cell
, vol.92
, Issue.3
, pp. 291-294
-
-
Alberts, B.1
-
7
-
-
0742305866
-
Network biology: Understanding the cell's functional organization
-
DOI 10.1038/nrg1272
-
Barabasi AL, Oltvai ZN. 2004. Network biology: understanding the cell's functional organization. Nat Rev Genet 5:101-13. (Pubitemid 38160277)
-
(2004)
Nature Reviews Genetics
, vol.5
, Issue.2
, pp. 101-113
-
-
Barabasi, A.-L.1
Oltvai, Z.N.2
-
8
-
-
0002226683
-
Pajek-Program for large network analysis
-
Batagefj V, Mrvar A. 1998. Pajek-Program for large network analysis. Connections 21:47-57.
-
(1998)
Connections
, vol.21
, pp. 47-57
-
-
Batagefj, V.1
Mrvar, A.2
-
9
-
-
0042154192
-
Evolutionary capacitance as a general feature of complex gene networks
-
DOI 10.1038/nature01765
-
Bergman A, Siegal ML. 2003. Evolutionary capacitance as a general feature of complex gene networks. Nature 424:549-52. (Pubitemid 36975775)
-
(2003)
Nature
, vol.424
, Issue.6948
, pp. 549-552
-
-
Bergman, A.1
Siegal, M.L.2
-
10
-
-
77249175352
-
Knowledge discovery in metabolomics: An overview of MS data handling
-
Boccard J, Veuthey JL, Rudaz S. 2010. Knowledge discovery in metabolomics: an overview of MS data handling. J Sep Sci 33:290-304.
-
(2010)
J Sep Sci
, vol.33
, pp. 290-304
-
-
Boccard, J.1
Veuthey, J.L.2
Rudaz, S.3
-
11
-
-
0036913503
-
1H-NMR-based metabonomics
-
DOI 10.1038/nm802
-
Brindle JT, et al. 2002. Rapid and noninvasive diagnosis of the presence and severity of coronary heart disease using lH-NMR-based metabonomics. Nat Med 8:1439-44. (Pubitemid 36019430)
-
(2002)
Nature Medicine
, vol.8
, Issue.12
, pp. 1439-1444
-
-
Brindle, J.T.1
Antti, H.2
Holmes, E.3
Tranter, G.4
Nicholson, J.K.5
Bethell, H.W.L.6
Clarke, S.7
Schofield, P.M.8
McKilligin, E.9
Mosedale, D.E.10
Grainger, D.J.11
-
12
-
-
33846115831
-
Longevity network: Construction and implications
-
DOI 10.1016/j.mad.2006.11.018, PII S004763740600251X, Functional Genomics of Aging III
-
Budovsky A, Abramovich A, Cohen R, Chalifa-Caspi V, Fraifeld V. 2007. Longevity network: construction and implications. Mech Ageing Dev 128:117-24. (Pubitemid 46073067)
-
(2007)
Mechanisms of Ageing and Development
, vol.128
, Issue.1
, pp. 117-124
-
-
Budovsky, A.1
Abramovich, A.2
Cohen, R.3
Chalifa-Caspi, V.4
Fraifeld, V.5
-
13
-
-
70249151450
-
Metabolic network discovery through reverse engineering of metabolome data
-
Çakir T, Hendriks MM, Westerhuis JA, Smilde AK. 2009. Metabolic network discovery through reverse engineering of metabolome data. Metabolomics 5:318-29.
-
(2009)
Metabolomics
, vol.5
, pp. 318-329
-
-
Çakir, T.1
Hendriks, M.M.2
Westerhuis, J.A.3
Smilde, A.K.4
-
14
-
-
70349318579
-
RRLC-MS/MS-based metabonomics combined with in-depth analysis of metabolic correlation network: Finding potential biomarkers for breast cancer
-
Chen Y, et al. 2009. RRLC-MS/MS-based metabonomics combined with in-depth analysis of metabolic correlation network: finding potential biomarkers for breast cancer. Analyst 134:2003-11.
-
(2009)
Analyst
, vol.134
, pp. 2003-2011
-
-
Chen, Y.1
-
15
-
-
74549189330
-
Flux-sum analysis: A metabolite-centric approach for understanding the metabolic network
-
Chung BK, Lee DY. 2009. Flux-sum analysis: a metabolite-centric approach for understanding the metabolic network. BMC Syst Biol 3:117.
-
(2009)
BMC Syst Biol
, vol.3
, pp. 117
-
-
Chung, B.K.1
Lee, D.Y.2
-
16
-
-
41249085808
-
Molecular mechanism of PPAR in the regulation of age-related inflammation
-
Chung JH, Seo AY, Chung SW, Kim MK, Leeuwenburgh C, Yu BP, Chung HY. 2008. Molecular mechanism of PPAR in the regulation of age-related inflammation. Ageing Res Rev 7:126-36.
-
(2008)
Ageing Res Rev
, vol.7
, pp. 126-136
-
-
Chung, J.H.1
Seo, A.Y.2
Chung, S.W.3
Kim, M.K.4
Leeuwenburgh, C.5
Yu, B.P.6
Chung, H.Y.7
-
17
-
-
57749200993
-
Metabolomic and flux-balance analysis of age-related decline of hypoxia tolerance in Drosophila muscle tissue
-
Coquin L, Feala JD, McCulloch AD, Paternostro G. 2008. Metabolomic and flux-balance analysis of age-related decline of hypoxia tolerance in Drosophila muscle tissue. Mol Syst Biol 4:233.
-
(2008)
Mol Syst Biol
, vol.4
, pp. 233
-
-
Coquin, L.1
Feala, J.D.2
McCulloch, A.D.3
Paternostro, G.4
-
18
-
-
33748636462
-
Cellular networks and the aging process
-
DOI 10.1080/13813450600711243, PII X282533V28113642
-
Csermely P, Soti C. 2006. Cellular networks and the aging process. Arch Physiol Biochem 112:60-4. (Pubitemid 44384773)
-
(2006)
Archives of Physiology and Biochemistry
, vol.112
, Issue.2
, pp. 60-64
-
-
Csermely, P.1
Soti, C.2
-
19
-
-
67149116887
-
Understanding the regulation of aspartate metabolism using a model based on measured kinetic parameters
-
Curien G, Bastien O, Robert-Genthon M, Cornish-Bowden A, Cardenas ML, Dumas R. 2009. Understanding the regulation of aspartate metabolism using a model based on measured kinetic parameters. Mol Syst Biol 5:271.
-
(2009)
Mol Syst Biol
, vol.5
, pp. 271
-
-
Curien, G.1
Bastien, O.2
Robert-Genthon, M.3
Cornish-Bowden, A.4
Cardenas, M.L.5
Dumas, R.6
-
21
-
-
13844250627
-
A more efficient search strategy for aging genes based on connectivity
-
DOI 10.1093/bioinformatics/bti004
-
Ferrarini L, Bertelli L, Feala J, McCulloch AD, Paternostro G. 2005. A more efficient search strategy for aging genes based on connectivity. Bioinformatics 21:338-48. (Pubitemid 40246605)
-
(2005)
Bioinformatics
, vol.21
, Issue.3
, pp. 338-348
-
-
Ferrarini, L.1
Bertelli, L.2
Feala, J.3
McCulloch, A.D.4
Paternostro, G.5
-
22
-
-
0042816453
-
Large-scale evaluation of in silico gene deletions in Saccharomyces cerevisiae
-
Forster J, Famili I, Palsson BO, Nielsen J. 2003. Large-scale evaluation of in silico gene deletions in Saccharomyces cerevisiae. OMICS 7:193-202. (Pubitemid 36896124)
-
(2003)
OMICS A Journal of Integrative Biology
, vol.7
, Issue.2
, pp. 193-202
-
-
Forster, J.1
Famili, I.2
Palsson, B.O.3
Nielsen, J.4
-
23
-
-
0037177560
-
Evolutionary rate in the protein interaction network
-
DOI 10.1126/science.1068696
-
Fraser HB, Hirsh AE, Steinmetz LM, Scharfe C, Feldman MW. 2002. Evolutionary rate in the protein interaction network. Science 296:750-2. (Pubitemid 34442006)
-
(2002)
Science
, vol.296
, Issue.5568
, pp. 750-752
-
-
Fraser, H.B.1
Hirsh, A.E.2
Steinmetz, L.M.3
Scharfe, C.4
Feldman, M.W.5
-
25
-
-
54049133830
-
Gene module identification from microarray data using nonnegative independent component analysis
-
Gong T, Xuan J, Wang C, Li H, Hoffman E, Clarke R, Wang Y. 2007. Gene module identification from microarray data using nonnegative independent component analysis. Gene Regul Syst Bio 1:349-63.
-
(2007)
Gene Regul Syst Bio
, vol.1
, pp. 349-363
-
-
Gong, T.1
Xuan, J.2
Wang, C.3
Li, H.4
Hoffman, E.5
Clarke, R.6
Wang, Y.7
-
26
-
-
1942470073
-
Metabolomics by numbers: Acquiring and understanding global metabolite data
-
DOI 10.1016/j.tibtech.2004.03.007, PII S0167779904000812
-
Goodacre R, Vaidyanathan S, Dunn WB, Harrigan GG, Kell DB. 2004. Metabolomics by numbers: acquiring and understanding global metabolite data. Trends Biotechnol 22:245-52. (Pubitemid 38515742)
-
(2004)
Trends in Biotechnology
, vol.22
, Issue.5
, pp. 245-252
-
-
Goodacre, R.1
Vaidyanathan, S.2
Dunn, W.B.3
Harrigan, G.G.4
Kell, D.B.5
-
27
-
-
70649089393
-
1H NMR metabolomics study of age profiling in children
-
Gu H, Pan Z, Xi B, Hainline BE, Shanaiah N, Asiago V, Gowda GA, Raftery D. 2009. 1H NMR metabolomics study of age profiling in children. NMR Biomed 22:826-33.
-
(2009)
NMR Biomed
, vol.22
, pp. 826-833
-
-
Gu, H.1
Pan, Z.2
Xi, B.3
Hainline, B.E.4
Shanaiah, N.5
Asiago, V.6
Gowda, G.A.7
Raftery, D.8
-
28
-
-
0842290925
-
Molecular Evolution in Large Genetic Networks: Does Connectivity Equal Constraint?
-
DOI 10.1007/s00239-003-2544-0
-
Hahn MW, Conant GC, Wagner A. 2004. Molecular evolution in large genetic networks: does connectivity equal constraint? J Mol Evol 58:203-11. (Pubitemid 38183972)
-
(2004)
Journal of Molecular Evolution
, vol.58
, Issue.2
, pp. 203-211
-
-
Hahn, M.W.1
Conant, G.C.2
Wagner, A.3
-
30
-
-
0035319006
-
Computational studies of gene regulatory networks: In numero molecular biology
-
DOI 10.1038/35066056
-
Hasty J, McMillen D, Isaacs F, Collins JJ. 2001. Computational studies of gene regulatory networks: in numero molecular biology. Nat Rev Genet 2:268-79. (Pubitemid 33674775)
-
(2001)
Nature Reviews Genetics
, vol.2
, Issue.4
, pp. 268-279
-
-
Hasty, J.1
McMillen, D.2
Isaacs, F.3
Collins, J.J.4
-
31
-
-
0035852785
-
Dynamic modeling of gene expression data
-
DOI 10.1073/pnas.98.4.1693
-
Holter NS, Maritan A, Cieplak M, Fedoroff NV, Banavar JR. 2001. Dynamic modeling of gene expression data. Proc Natl Acad Sci USA 98:1693-8. (Pubitemid 32165560)
-
(2001)
Proceedings of the National Academy of Sciences of the United States of America
, vol.98
, Issue.4
, pp. 1693-1698
-
-
Holter, N.S.1
Maritan, A.2
Cieplak, M.3
Fedoroff, N.V.4
Banavar, J.R.5
-
32
-
-
7444253428
-
Systems biology and new technologies enable predictive and preventative medicine
-
DOI 10.1126/science.1104635
-
Hood L, Heath JR, Phelps ME, Lin B. 2004. Systems biology and new technologies enable predictive and preventative medicine. Science 306:640-3. (Pubitemid 39440903)
-
(2004)
Science
, vol.306
, Issue.5696
, pp. 640-643
-
-
Hood, L.1
Heath, J.R.2
Phelps, M.E.3
Lin, B.4
-
33
-
-
0035799707
-
Lethality and centrality in protein networks
-
DOI 10.1038/35075138
-
Jeong H, Mason SP, Barabasi AL, Oltvai ZN. 2001. Lethality and centrality in protein networks. Nature 411:41-42. (Pubitemid 32428180)
-
(2001)
Nature
, vol.411
, Issue.6833
, pp. 41-42
-
-
Jeong, H.1
Mason, S.P.2
Barabasi, A.-L.3
Oltvai, Z.N.4
-
34
-
-
0034609791
-
The large-scale organization of metabolic networks
-
Jeong H, Tombor B, Albert R, Oltvai ZN, Barabasi AL. 2000. The large-scale organization of metabolic networks. Nature 407:651-4.
-
(2000)
Nature
, vol.407
, pp. 651-654
-
-
Jeong, H.1
Tombor, B.2
Albert, R.3
Oltvai, Z.N.4
Barabasi, A.L.5
-
35
-
-
50049084342
-
A rapid LC-FTMS method for the analysis of cysteine, cystine and cysteine/cystine steady-state redox potential in human plasma
-
Johnson JM, Strobel FH, Reed M, Pohl J, Jones DP. 2008. A rapid LC-FTMS method for the analysis of cysteine, cystine and cysteine/cystine steady-state redox potential in human plasma. Clin Chim Acta 396:43-8.
-
(2008)
Clin Chim Acta
, vol.396
, pp. 43-48
-
-
Johnson, J.M.1
Strobel, F.H.2
Reed, M.3
Pohl, J.4
Jones, D.P.5
-
36
-
-
33744949848
-
Extracellular redox state: Refining the definition of oxidative stress in aging
-
DOI 10.1089/rej.2006.9.169
-
Jones DP. 2006. Extracellular redox state: refining the definition of oxidative stress in aging. Rejuvenation Res 9:169-81. (Pubitemid 43856805)
-
(2006)
Rejuvenation Research
, vol.9
, Issue.2
, pp. 169-181
-
-
Jones, D.P.1
-
37
-
-
2942676743
-
Metabolomics and systems biology: Making sense of the soup
-
DOI 10.1016/j.mib.2004.04.012, PII S1369527404000505
-
Kell DB. 2004. Metabolomics and systems biology: making sense of the soup. Curr Opin Microbiol 7:296-307. (Pubitemid 38765114)
-
(2004)
Current Opinion in Microbiology
, vol.7
, Issue.3
, pp. 296-307
-
-
Kell, D.B.1
-
38
-
-
0002459646
-
Snapshots of systems: Metabolic control analysis and biotechnology in the post-genomic era
-
Cornish-Bowden A, Cardenas ML, editors.. Dordrecht (The Netherlands): Kluwer Academic Publishers
-
Kell DB, Mendes P. 2000. Snapshots of systems: metabolic control analysis and biotechnology in the post-genomic era. In: Cornish-Bowden A, Cardenas ML, editors. Technological and medical implications of metabolic control analysis. Dordrecht (The Netherlands): Kluwer Academic Publishers, p. 3-25.
-
(2000)
Technological and Medical Implications of Metabolic Control Analysis
, pp. 3-25
-
-
Kell, D.B.1
Mendes, P.2
-
39
-
-
38349109305
-
The genetics of ageing: Insight from genome-wide approaches in invertebrate model organisms
-
Kennedy BK. 2008. The genetics of ageing: insight from genome-wide approaches in invertebrate model organisms. J Intern Med 263:142-52.
-
(2008)
J Intern Med
, vol.263
, pp. 142-152
-
-
Kennedy, B.K.1
-
40
-
-
0032190369
-
Simultaneous analysis of the majority of low-molecular-weight, redox- active compounds from mitochondria
-
DOI 10.1006/abio.1998.2831
-
Kristal BS, Vigneau-Callahan KE, Matson WR. 1998. Simultaneous analysis of the majority of low-molecular-weight, redox-active compounds from mitochondria. Anal Biochem 263:18-25. (Pubitemid 28445419)
-
(1998)
Analytical Biochemistry
, vol.263
, Issue.1
, pp. 18-25
-
-
Kristal, B.S.1
Vigneau-Callahan, K.E.2
Matson, W.R.3
-
41
-
-
0142124263
-
Gene loss, protein sequence divergence, gene dispensability, expression level, and interactivity are correlated in eukaryotic evolution
-
DOI 10.1101/gr.1589103
-
Krylov DM, Wolf YI, Rogozin IB, Koonin EV. 2003. Gene loss, protein sequence divergence, gene dispensability, expression level, and interactivity are correlated in eukaryotic evolution. Genome Res 13:2229-35. (Pubitemid 37265987)
-
(2003)
Genome Research
, vol.13
, Issue.10
, pp. 2229-2235
-
-
Krylov, D.M.1
Wolf, Y.I.2
Rogozin, I.B.3
Koonin, E.V.4
-
43
-
-
77955603289
-
Metabolic signatures of exercise in human plasma
-
Lewis GD, et al. 2010. Metabolic signatures of exercise in human plasma. Sci Transl Med 2:33-37.
-
(2010)
Sci Transl Med
, vol.2
, pp. 33-37
-
-
Lewis, G.D.1
-
46
-
-
0002134284
-
Old age and natural death
-
Medawar PB. 1946. Old age and natural death. Modern Quart 2:30-49.
-
(1946)
Modern Quart
, vol.2
, pp. 30-49
-
-
Medawar, P.B.1
-
48
-
-
0025117953
-
An attempt at a rational classification of theories of ageing
-
Medvedev ZA. 1990. An attempt at a rational classification of theories of ageing. Biol Rev Camb Philos Soc 65:375-98.
-
(1990)
Biol Rev Camb Philos Soc
, vol.65
, pp. 375-398
-
-
Medvedev, Z.A.1
-
49
-
-
0038718854
-
The structure and function of complex networks
-
Newman MEJ. 2003. The structure and function of complex networks. SIAM Rev 45:167-256.
-
(2003)
SIAM Rev
, vol.45
, pp. 167-256
-
-
Newman, M.E.J.1
-
51
-
-
77950361791
-
RNAi screens to identify components of gene networks that modulate aging in Caenorhabditis elegans
-
Ni Z, Lee SS. 2010. RNAi screens to identify components of gene networks that modulate aging in Caenorhabditis elegans. Brief Funct Genomics 9:53-64.
-
(2010)
Brief Funct Genomics
, vol.9
, pp. 53-64
-
-
Ni, Z.1
Lee, S.S.2
-
52
-
-
0043069547
-
Understanding 'global' systems biology: Metabonomics and the continuum of metabolism
-
Nicholson JK, Wilson ID. 2003. Opinion: understanding 'global' systems biology: metabonomics and the continuum of metabolism. Nat Rev Drug Discov 2:668-76. (Pubitemid 37361770)
-
(2003)
Nature Reviews Drug Discovery
, vol.2
, Issue.8
, pp. 668-676
-
-
Nicholson, J.K.1
Wilson, I.D.2
-
54
-
-
0032168794
-
Systematic functional analysis of the yeast genome
-
DOI 10.1016/S0167-7799(98)01214-1, PII S0167779998012141
-
Oliver SG, Winson MK, Kell DB, Baganz F. 1998. Systematic functional analysis of the yeast genome. Trends Biotechnol 16:373-8. (Pubitemid 28410425)
-
(1998)
Trends in Biotechnology
, vol.16
, Issue.9
, pp. 373-378
-
-
Oliver, S.G.1
Winson, M.K.2
Kell, D.B.3
Baganz, F.4
-
55
-
-
73649150958
-
The maintenance of the accuracy of protein synthesis and its relevance to ageing
-
Orgel LE. 1963. The maintenance of the accuracy of protein synthesis and its relevance to ageing. Proc Natl Acad Sci USA 49:517-21.
-
(1963)
Proc Natl Acad Sci USA
, vol.49
, pp. 517-521
-
-
Orgel, L.E.1
-
56
-
-
0014877876
-
The maintenance of the accuracy of protein synthesis and its relevance to ageing: A correction
-
Orgel LE. 1970. The maintenance of the accuracy of protein synthesis and its relevance to ageing: a correction. Proc Natl Acad Sci USA 67:1476.
-
(1970)
Proc Natl Acad Sci USA
, vol.67
, pp. 1476
-
-
Orgel, L.E.1
-
57
-
-
0015932795
-
Ageing of clones of mammalian cells
-
Orgel LE. 1973. Ageing of clones of mammalian cells. Nature 243:441-5.
-
(1973)
Nature
, vol.243
, pp. 441-445
-
-
Orgel, L.E.1
-
58
-
-
68149169938
-
Signals of youth: Endocrine regulation of aging in Caenorhabditis elegans
-
Panowski SH, Dillin A. 2009. Signals of youth: endocrine regulation of aging in Caenorhabditis elegans. Trends Endocrinol Metab 20:259-64.
-
(2009)
Trends Endocrinol Metab
, vol.20
, pp. 259-264
-
-
Panowski, S.H.1
Dillin, A.2
-
59
-
-
17644413242
-
A regulatory network analysis of phenotypic plasticity in yeast
-
DOI 10.1086/429161
-
Promislow D. 2005. A regulatory network analysis of phenotypic plasticity in yeast. Am Nat 165:515-23. (Pubitemid 40564586)
-
(2005)
American Naturalist
, vol.165
, Issue.5
, pp. 515-523
-
-
Promislow, D.1
-
61
-
-
0035160371
-
A functional genomics strategy that uses metabolome data to reveal the phenotype of silent mutations
-
DOI 10.1038/83496
-
Raamsdonk LM, et al. 2001. A functional genomics strategy that uses metabolome data to reveal the phenotype of silent mutations. Nat Biotechnol 19:45-50. (Pubitemid 32051955)
-
(2001)
Nature Biotechnology
, vol.19
, Issue.1
, pp. 45-50
-
-
Raamsdonk, L.M.1
Teusink, B.2
Broadhurst, D.3
Zhang, N.4
Hayes, A.5
Walsh, M.C.6
Berden, J.A.7
Brindle, K.M.8
Kell, D.B.9
Rowland, J.J.10
Westerhoff, H.V.11
Van Dam, K.12
Oliver, S.G.13
-
62
-
-
0034814071
-
Control motifs for intracellular regulatory networks
-
DOI 10.1146/annurev.bioeng.3.1.391
-
Rao CV, Arkin AP. 2001. Control motifs for intracellular regulatory networks. Annu Rev Biomed Eng 3:391-419. (Pubitemid 32928045)
-
(2001)
Annual Review of Biomedical Engineering
, vol.3
, pp. 391-419
-
-
Rao, C.V.1
Arkin, A.P.2
-
63
-
-
0037199968
-
Hierarchical organization of modularity in metabolic networks
-
DOI 10.1126/science.1073374
-
Ravasz E, Somera AL, Mongru DA, Oltvai ZN, Barabasi AL. 2002. Hierarchical organization of modularity in metabolic networks. Science 297:1551-5. (Pubitemid 34971002)
-
(2002)
Science
, vol.297
, Issue.5586
, pp. 1551-1555
-
-
Ravasz, E.1
Somera, A.L.2
Mongru, D.A.3
Oltvai, Z.N.4
Barabasi, A.-L.5
-
65
-
-
38549095644
-
Metabonomics evaluations of age-related changes in the urinary compositions of male Sprague Dawley rats and effects of data normalization methods on statistical and quantitative analysis
-
Schnackenberg LK, Sun J, Espandiari P, Holland RD, Hanig J, Beger RD. 2007. Metabonomics evaluations of age-related changes in the urinary compositions of male Sprague Dawley rats and effects of data normalization methods on statistical and quantitative analysis. BMC Bioinformatics 8:S3.
-
(2007)
BMC Bioinformatics
, vol.8
-
-
Schnackenberg, L.K.1
Sun, J.2
Espandiari, P.3
Holland, R.D.4
Hanig, J.5
Beger, R.D.6
-
66
-
-
0037941585
-
Module networks: Identifying regulatory modules and their condition-specific regulators from gene expression data
-
DOI 10.1038/ng1165
-
Segal E, Shapira M, Regev A, Pe'er D, Botstein D, Roller D, Friedman N. 2003. Module networks: identifying regulatory modules and their condition-specific regulators from gene expression data. Nat Genet 34:166-76. (Pubitemid 36666927)
-
(2003)
Nature Genetics
, vol.34
, Issue.2
, pp. 166-176
-
-
Segal, E.1
Shapira, M.2
Regev, A.3
Pe'er, D.4
Botstein, D.5
Koller, D.6
Friedman, N.7
-
67
-
-
0036578795
-
Network motifs in the transcriptional regulation network of Escherichia coli
-
Shen-Orr SS, Milo R, Mangan S, Alon U. 2002. Network motifs in the transcriptional regulation network of Escherichia coli. Nat Genet 31:64-8.
-
(2002)
Nat Genet
, vol.31
, pp. 64-68
-
-
Shen-Orr, S.S.1
Milo, R.2
Mangan, S.3
Alon, U.4
-
68
-
-
58049121301
-
Longevity genes: Insights from calorie restriction and genetic longevity models
-
Shimokawa I, Chiba T, Yamaza H, Komatsu T. 2008. Longevity genes: insights from calorie restriction and genetic longevity models. Mol Cells 26:427-35.
-
(2008)
Mol Cells
, vol.26
, pp. 427-435
-
-
Shimokawa, I.1
Chiba, T.2
Yamaza, H.3
Komatsu, T.4
-
69
-
-
70349324702
-
High-throughput serum NMR metabonomics for cost-effective holistic studies on systemic metabolism
-
Soininen P, et al. 2009. High-throughput serum NMR metabonomics for cost-effective holistic studies on systemic metabolism. Analyst 134:1781-5.
-
(2009)
Analyst
, vol.134
, pp. 1781-1785
-
-
Soininen, P.1
-
70
-
-
74249118093
-
Aging mice show a decreasing correlation of gene expression within genetic modules
-
Southworth LK, Owen AB, Kim SK. 2009. Aging mice show a decreasing correlation of gene expression within genetic modules. PLoS Genet 5:el000776.
-
(2009)
PLoS Genet
, vol.5
-
-
Southworth, L.K.1
Owen, A.B.2
Kim, S.K.3
-
71
-
-
67149122033
-
Modulated modularity clustering as an exploratory tool for functional genomic inference
-
Stone EA, Ayroles JF. 2009. Modulated modularity clustering as an exploratory tool for functional genomic inference. PLoS Genet 5:el000479.
-
(2009)
PLoS Genet
, vol.5
-
-
Stone, E.A.1
Ayroles, J.F.2
-
72
-
-
64949111531
-
Current thoughts on the role of mitochondria and free radicals in the biology of aging
-
Van Remmen H, Jones DP. 2009. Current thoughts on the role of mitochondria and free radicals in the biology of aging. J Gerontol A Biol Sci Med Sci 64:171-4.
-
(2009)
J Gerontol A Biol Sci Med Sci
, vol.64
, pp. 171-174
-
-
Van Remmen, H.1
Jones, D.P.2
-
73
-
-
0034644270
-
The segment polarity network is a robust developmental module
-
DOI 10.1038/35018085
-
von Dassow G, Meir E, Munro EM, Odell GM. 2000. The segment polarity network is a robust developmental module. Nature 406:188-92. (Pubitemid 30469001)
-
(2000)
Nature
, vol.406
, Issue.6792
, pp. 188-192
-
-
Von Dassow, G.1
Meir, E.2
Munro, E.M.3
Odell, G.M.4
-
74
-
-
0034029892
-
Robustness against mutations in genetic networks of yeast
-
DOI 10.1038/74174
-
Wagner A. 2000. Robustness against mutations in genetic networks of yeast. Nat Genet 24:355-61. (Pubitemid 30187432)
-
(2000)
Nature Genetics
, vol.24
, Issue.4
, pp. 355-361
-
-
Wagner, A.1
-
76
-
-
34249292585
-
Metabonomic investigations of aging and caloric restriction in a life-long dog study
-
DOI 10.1021/pr060685n
-
Wang Y, Lawler D, Larson B, Ramadan Z, Kochhar S, Holmes E, Nicholson JK. 2007. Metabonomic investigations of aging and caloric restriction in a life-long dog study. J Proteome Res 6:1846-54. (Pubitemid 46814508)
-
(2007)
Journal of Proteome Research
, vol.6
, Issue.5
, pp. 1846-1854
-
-
Wang, Y.1
Lawler, D.2
Larson, B.3
Ramadan, Z.4
Kochhar, S.5
Holmes, E.6
Nicholson, J.K.7
-
77
-
-
23844523425
-
Complementing the genome with an "exposome": The outstanding challenge of environmental exposure measurement in molecular epidemiology
-
DOI 10.1158/1055-9965.EPI-05-0456
-
Wild CP. 2005. Complementing the genome with an "exposome": the outstanding challenge of environmental exposure measurement in molecular epidemiology. Cancer Epidemiol Biomarkers Prev 14:1847-50. (Pubitemid 41161186)
-
(2005)
Cancer Epidemiology Biomarkers and Prevention
, vol.14
, Issue.8
, pp. 1847-1850
-
-
Wild, C.P.1
-
78
-
-
32344432945
-
1H NMR and HPLC-TOF MS
-
DOI 10.1039/b500852b
-
Williams RE, Lenz EM, Lowden JS, Rantalainen M, Wilson ID. 2005. The metabonomics of aging and development in the rat: an investigation into the effect of age on the profile of endogenous metabolites in the urine of male rats using 1H NMR and HPLC-TOF MS. Mol Biosyst 1:166-75. (Pubitemid 43362244)
-
(2005)
Molecular BioSystems
, vol.1
, Issue.2
, pp. 166-175
-
-
Williams, R.E.1
Lenz, E.M.2
Lowden, J.S.3
Rantalainen, M.4
Wilson, I.D.5
-
79
-
-
33644861299
-
A multi-analytical platform approach to the metabonomic analysis of plasma from normal and zucker (fa/fa) obese rats
-
DOI 10.1039/b516356k
-
Williams R, Lenz EM, Wilson AJ, Granger J, Wilson ID, Major H, Stumpf C, Plumb R. 2006. A multi-analytical platform approach to the metabonomic analysis of plasma from normal and Zucker (fa/fa) obese rats. Mol Biosyst 2:174-83. (Pubitemid 43373976)
-
(2006)
Molecular BioSystems
, vol.2
, Issue.3-4
, pp. 174-183
-
-
Williams, R.1
Lenz, E.M.2
Wilson, A.J.3
Granger, J.4
Wilson, I.D.5
Major, H.6
Stumpf, C.7
Plumb, R.8
-
80
-
-
58149202163
-
HMDB: A knowledgebase for the human metabolome
-
Wishart DS, et al. 2009. HMDB: a knowledgebase for the human metabolome. Nucleic Acids Res 37(Database issue):D603-10.
-
(2009)
Nucleic Acids Res
, vol.37
, Issue.DATABASE ISSUE
-
-
Wishart, D.S.1
-
81
-
-
3543099834
-
Evolution and topology in the yeast protein interaction network
-
DOI 10.1101/gr.2300204
-
Wuchty S. 2004. Evolution and topology in the yeast protein interaction network. Genome Res 14:1310-14. (Pubitemid 39029227)
-
(2004)
Genome Research
, vol.14
, Issue.7
, pp. 1310-1314
-
-
Wuchty, S.1
-
82
-
-
36849004497
-
A modular network model of aging
-
Xue H, et al. 2007. A modular network model of aging. Mol Syst Biol 3:147.
-
(2007)
Mol Syst Biol
, vol.3
, pp. 147
-
-
Xue, H.1
-
83
-
-
70349339355
-
Metabonomic characterization of aging and investigation on the anti-aging effects of total flavones of Epimedium
-
Yan S, Wu B, Lin Z, Jin H, Huang J, Yang Y, Zhang X, Shen Z, Zhang W. 2009. Metabonomic characterization of aging and investigation on the anti-aging effects of total flavones of Epimedium. Mol Biosyst 5:1204-13.
-
(2009)
Mol Biosyst
, vol.5
, pp. 1204-1213
-
-
Yan, S.1
Wu, B.2
Lin, Z.3
Jin, H.4
Huang, J.5
Yang, Y.6
Zhang, X.7
Shen, Z.8
Zhang, W.9
-
84
-
-
67650733222
-
ApLCMS-adaptive processing of high-resolution LC/MS data
-
Yu T, Park Y, lohnson JM, Jones DP. 2009. apLCMS-adaptive processing of high-resolution LC/MS data. Bioinformatics 25:1930-36.
-
(2009)
Bioinformatics
, vol.25
, pp. 1930-1936
-
-
Yu, T.1
Park, Y.2
Lohnson, J.M.3
Jones, D.P.4
-
85
-
-
37249049422
-
AGEMAP: A gene expression database for aging in mice
-
Zahn JM, et al. 2007. AGEMAP: a gene expression database for aging in mice. PLoS Genet 3:e201.
-
(2007)
PLoS Genet
, vol.3
-
-
Zahn, J.M.1
|