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Volumn 24, Issue 4, 2000, Pages 355-361

Robustness against mutations in genetic networks of yeast

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; GENE CONTROL; GENE DUPLICATION; GENE EXPRESSION; GENE FUNCTION; GENE MUTATION; MOLECULAR INTERACTION; NONHUMAN; PRIORITY JOURNAL; SACCHAROMYCES CEREVISIAE;

EID: 0034029892     PISSN: 10614036     EISSN: None     Source Type: Journal    
DOI: 10.1038/74174     Document Type: Article
Times cited : (327)

References (48)
  • 1
    • 0030025046 scopus 로고    scopus 로고
    • Functional redundancy of the muscle-specific transcription factors myf5 and myogenin
    • Wang, Y.K., Schnegelsberg, P.N.J., Dausman, J. & Jaenisch, R. Functional redundancy of the muscle-specific transcription factors myf5 and myogenin. Nature 379, 823-825 (1996).
    • (1996) Nature , vol.379 , pp. 823-825
    • Wang, Y.K.1    Schnegelsberg, P.N.J.2    Dausman, J.3    Jaenisch, R.4
  • 3
    • 0028300478 scopus 로고
    • Functional redundancy: The respective roles of the 2 sloppy paired genes in Drosophila segmentation
    • Cadigan, K.M., Grossniklaus, U. & Gehring, W.J. Functional redundancy: the respective roles of the 2 sloppy paired genes in Drosophila segmentation. Proc. Natl Acad. Sci. USA 91, 6324-6328 (1994).
    • (1994) Proc. Natl Acad. Sci. USA , vol.91 , pp. 6324-6328
    • Cadigan, K.M.1    Grossniklaus, U.2    Gehring, W.J.3
  • 4
    • 0028064954 scopus 로고
    • Redundant functions of the genes knirps and knirps-related for the establishment of anterior Drosophila head structures
    • Gonzalez-Gaitan, M., Rothe, M., Wimmer, E.A., Taubert, H. & Jackle, H. Redundant functions of the genes knirps and knirps-related for the establishment of anterior Drosophila head structures. Proc. Natl Acad. Sci. USA 91, 8567-8571 (1994).
    • (1994) Proc. Natl Acad. Sci. USA , vol.91 , pp. 8567-8571
    • Gonzalez-Gaitan, M.1    Rothe, M.2    Wimmer, E.A.3    Taubert, H.4    Jackle, H.5
  • 5
    • 0029059790 scopus 로고
    • Rescue of the en-1 mutant phenotype by replacement of en-1 with en-2
    • Hanks, M., Wurst, W., Ansoncartwright, L., Auerbach, A.B. & Joyner, A.L. Rescue of the en-1 mutant phenotype by replacement of en-1 with en-2. Science 269, 679-682 (1995).
    • (1995) Science , vol.269 , pp. 679-682
    • Hanks, M.1    Wurst, W.2    Ansoncartwright, L.3    Auerbach, A.B.4    Joyner, A.L.5
  • 6
    • 0026048824 scopus 로고
    • Drosophila-abl and genetic redundancy in signal transduction
    • Hoffmann, F.M. Drosophila-abl and genetic redundancy in signal transduction. Trends Genet. 7, 351-356 (1991).
    • (1991) Trends Genet. , vol.7 , pp. 351-356
    • Hoffmann, F.M.1
  • 7
    • 0000349972 scopus 로고
    • Selection for an invariant character - 'Vibrissa number' - In the house mouse
    • Dun, R.B. & Fraser, A.S. Selection for an invariant character - 'vibrissa number' - in the house mouse. Nature 181, 1018-1019 (1958).
    • (1958) Nature , vol.181 , pp. 1018-1019
    • Dun, R.B.1    Fraser, A.S.2
  • 8
    • 0001604038 scopus 로고
    • Canalization of the scute phenotype of Drosophila
    • Rendel, J.M. Canalization of the scute phenotype of Drosophila. Evolution 13, 425-439 (1959).
    • (1959) Evolution , vol.13 , pp. 425-439
    • Rendel, J.M.1
  • 9
    • 0343152609 scopus 로고
    • eds Thompson, J.N. & Thoday, J.M. Academic, New York
    • Rendel, J.M. in Quantitative Genetic Variation (eds Thompson, J.N. & Thoday, J.M.) 139-156 (Academic, New York, 1979).
    • (1979) Quantitative Genetic Variation , pp. 139-156
    • Rendel, J.M.1
  • 11
    • 0342283079 scopus 로고    scopus 로고
    • Hsp90 buffers development against genetic variation and could link capacity for morphogenic change with environmental stress
    • Rutherford, S.L. & Lindquist, S. Hsp90 buffers development against genetic variation and could link capacity for morphogenic change with environmental stress. Mol. Biol. Cell 9, 2511-2511 (1998).
    • (1998) Mol. Biol. Cell , vol.9 , pp. 2511-2511
    • Rutherford, S.L.1    Lindquist, S.2
  • 12
    • 0019869334 scopus 로고
    • The molecular basis of dominance
    • Kacser, H. & Burns, J.A. The molecular basis of dominance. Genetics 97, 639-666 (1981).
    • (1981) Genetics , vol.97 , pp. 639-666
    • Kacser, H.1    Burns, J.A.2
  • 13
    • 0031033937 scopus 로고    scopus 로고
    • Functional analysis of the genes of yeast chromosome V by genetic footprinting
    • Smith, V., Chou, K.N., Lashkari, D., Botstein, D. & Brown, P.O. Functional analysis of the genes of yeast chromosome V by genetic footprinting. Science 275, 464-464 (1997).
    • (1997) Science , vol.275 , pp. 464-464
    • Smith, V.1    Chou, K.N.2    Lashkari, D.3    Botstein, D.4    Brown, P.O.5
  • 14
    • 0026847016 scopus 로고
    • Redundancies, development and the flow of information
    • Tautz, D. Redundancies, development and the flow of information. Bioessays 14, 263-266 (1992).
    • (1992) Bioessays , vol.14 , pp. 263-266
    • Tautz, D.1
  • 17
    • 0022410121 scopus 로고
    • Limits of adaptation: The evolution of selective neutrality
    • Hartl, D.L., Dykhuizen, D.E. & Dean, A.M. Limits of adaptation: the evolution of selective neutrality. Genetics 111, 655-674 (1985).
    • (1985) Genetics , vol.111 , pp. 655-674
    • Hartl, D.L.1    Dykhuizen, D.E.2    Dean, A.M.3
  • 18
    • 0019255001 scopus 로고
    • Selective neutrality of 6pgd allozymes in Escherichia coli and the effects of genetic background
    • Dykhuizen, D. & Hartl, D.L. Selective neutrality of 6pgd allozymes in Escherichia coli and the effects of genetic background. Genetics 96, 801-817 (1980).
    • (1980) Genetics , vol.96 , pp. 801-817
    • Dykhuizen, D.1    Hartl, D.L.2
  • 19
    • 0033580813 scopus 로고    scopus 로고
    • Systems properties of the Haemophilus influenzae rd metabolic genotype
    • Edwards, S. & Palsson, B.O. Systems properties of the Haemophilus influenzae rd metabolic genotype. J. Biol. Cnem. 274, 17410-17416 (1999).
    • (1999) J. Biol. Cnem. , vol.274 , pp. 17410-17416
    • Edwards, S.1    Palsson, B.O.2
  • 20
    • 0029661331 scopus 로고    scopus 로고
    • Does evolutionary plasticity evolve?
    • Wagner, A. Does evolutionary plasticity evolve? Evolution 50, 1008-1023 (1996).
    • (1996) Evolution , vol.50 , pp. 1008-1023
    • Wagner, A.1
  • 21
    • 0030716471 scopus 로고    scopus 로고
    • Comparable rates of gene loss and functional divergence after genome duplications early in vertebrate evolution
    • Nadeau, J.H. & Sankoff, D. Comparable rates of gene loss and functional divergence after genome duplications early in vertebrate evolution. Genetics 147, 1259-1266 (1997).
    • (1997) Genetics , vol.147 , pp. 1259-1266
    • Nadeau, J.H.1    Sankoff, D.2
  • 22
    • 0032516073 scopus 로고    scopus 로고
    • Extent of genomic rearrangement after genome duplication in yeast
    • Seoighe, C. & Wolfe, K.H. Extent of genomic rearrangement after genome duplication in yeast. Proc. Natl Acad. Sci. USA 95, 4447-4452 (1998).
    • (1998) Proc. Natl Acad. Sci. USA , vol.95 , pp. 4447-4452
    • Seoighe, C.1    Wolfe, K.H.2
  • 23
    • 0027977009 scopus 로고
    • Evolution of distinct developmental functions of 3 Drosophila genes by acquisition of different cis-regulatory regions
    • Li, X.L. & Noll, M. Evolution of distinct developmental functions of 3 Drosophila genes by acquisition of different cis-regulatory regions. Nature 367, 83-87 (1994).
    • (1994) Nature , vol.367 , pp. 83-87
    • Li, X.L.1    Noll, M.2
  • 24
    • 0032561246 scopus 로고    scopus 로고
    • The transcriptional program of sporulation in budding yeast
    • Chu, S. et al. The transcriptional program of sporulation in budding yeast. Science 282, 699-705 (1998).
    • (1998) Science , vol.282 , pp. 699-705
    • Chu, S.1
  • 25
    • 0030669030 scopus 로고    scopus 로고
    • Exploring the metabolic and genetic control of gene expression on a genomic scale
    • DeRisi, J.L., Iyer, V.R. & Brown, P.O. Exploring the metabolic and genetic control of gene expression on a genomic scale. Science 278, 680-686 (1997).
    • (1997) Science , vol.278 , pp. 680-686
    • DeRisi, J.L.1    Iyer, V.R.2    Brown, P.O.3
  • 26
    • 0031742022 scopus 로고    scopus 로고
    • Comprehensive identification of cell-cycle-regulated genes of the yeast Saccharomyces cerevisiae by microarray hybridization
    • Spellman, P.T. et al. Comprehensive identification of cell-cycle-regulated genes of the yeast Saccharomyces cerevisiae by microarray hybridization. Mol. Biol. Cell 9, 3273-3297 (1998).
    • (1998) Mol. Biol. Cell , vol.9 , pp. 3273-3297
    • Spellman, P.T.1
  • 27
    • 0030947344 scopus 로고    scopus 로고
    • Molecular evidence for an ancient duplication of the entire yeast genome
    • Wolfe, K.H. & Shields, D.C. Molecular evidence for an ancient duplication of the entire yeast genome. Nature 387, 708-713 (1997).
    • (1997) Nature , vol.387 , pp. 708-713
    • Wolfe, K.H.1    Shields, D.C.2
  • 28
    • 0031890960 scopus 로고    scopus 로고
    • Marginal fitness contributions of nonessential genes in yeast
    • Thatcher, J.W., Shaw, J.M. & Dickinson, W.J. Marginal fitness contributions of nonessential genes in yeast. Proc. Natl Acad. Sci. USA 95, 253-257 (1998).
    • (1998) Proc. Natl Acad. Sci. USA , vol.95 , pp. 253-257
    • Thatcher, J.W.1    Shaw, J.M.2    Dickinson, W.J.3
  • 30
    • 0032879798 scopus 로고    scopus 로고
    • Yeast genome evolution in the post-genome era
    • Seoighe, C. & Wolfe, K.H. Yeast genome evolution in the post-genome era. Curr. Opin. Microbiol. 2, 548-554 (1999).
    • (1999) Curr. Opin. Microbiol. , vol.2 , pp. 548-554
    • Seoighe, C.1    Wolfe, K.H.2
  • 31
    • 0033529707 scopus 로고    scopus 로고
    • Functional characterization of the S. cerevisiae genome by gene deletion and parallel analysis
    • Winzeler, E.A. et al. Functional characterization of the S. cerevisiae genome by gene deletion and parallel analysis. Science 285, 901-906 (1999).
    • (1999) Science , vol.285 , pp. 901-906
    • Winzeler, E.A.1
  • 32
    • 0032214899 scopus 로고    scopus 로고
    • SCOP, structural classification of proteins database: Applications to evaluation of the effectiveness of sequence alignment methods and statistics of protein structural data
    • Hubbard, T.J.P., Alley, B., Brenner, S.E., Murzin, A.G. & Chothia, C. SCOP, structural classification of proteins database: applications to evaluation of the effectiveness of sequence alignment methods and statistics of protein structural data. Acta Crystallogr. D Biol. Crystallogr. 54, 1147-1154 (1998).
    • (1998) Acta Crystallogr. D Biol. Crystallogr. , vol.54 , pp. 1147-1154
    • Hubbard, T.J.P.1    Alley, B.2    Brenner, S.E.3    Murzin, A.G.4    Chothia, C.5
  • 33
    • 0027983037 scopus 로고
    • Convergent evolution: The need to be explicit
    • Doolittle, R.F. Convergent evolution: the need to be explicit. Trends Biochem. Sci. 19, 15-18 (1994).
    • (1994) Trends Biochem. Sci. , vol.19 , pp. 15-18
    • Doolittle, R.F.1
  • 34
    • 0031666414 scopus 로고    scopus 로고
    • Analogous enzymes: Independent inventions in enzyme evolution
    • Galperin, M.Y., Walker, D.R. & Koonin, E.V. Analogous enzymes: independent inventions in enzyme evolution. Genome Res. 8, 779-790 (1998).
    • (1998) Genome Res. , vol.8 , pp. 779-790
    • Galperin, M.Y.1    Walker, D.R.2    Koonin, E.V.3
  • 35
    • 0030617955 scopus 로고    scopus 로고
    • A population genetic theory of canalization
    • Wagner, G.P., Booth, G. & Bagherichaichian, H. A population genetic theory of canalization. Evolution 51, 329-347 (1997).
    • (1997) Evolution , vol.51 , pp. 329-347
    • Wagner, G.P.1    Booth, G.2    Bagherichaichian, H.3
  • 36
    • 0032921497 scopus 로고    scopus 로고
    • Redundant gene functions and natural selection
    • Wagner, A. Redundant gene functions and natural selection. J. Evol. Biol. 12, 1-16 (1999).
    • (1999) J. Evol. Biol. , vol.12 , pp. 1-16
    • Wagner, A.1
  • 37
    • 0034100201 scopus 로고    scopus 로고
    • The role of pleiotropy, population size fluctuations, and fitness effects of mutations in the evolution of redundant gene functions
    • Wagner, A. The role of pleiotropy, population size fluctuations, and fitness effects of mutations in the evolution of redundant gene functions. Genetics 154, 1389-1401 (2000).
    • (2000) Genetics , vol.154 , pp. 1389-1401
    • Wagner, A.1
  • 38
    • 0024729253 scopus 로고
    • DNA damage activates transcription and transposition of yeast Ty retrotransposons
    • Bradshaw, V.A. & McEntee, K. DNA damage activates transcription and transposition of yeast Ty retrotransposons. Mol. Gen Genet. 218, 465-474 (1989).
    • (1989) Mol. Gen Genet. , vol.218 , pp. 465-474
    • Bradshaw, V.A.1    McEntee, K.2
  • 39
    • 0021213885 scopus 로고
    • Temperature effects on the rate of Ty transposition
    • Paquin, C.E. & Williamson, V.M. Temperature effects on the rate of Ty transposition. Science 226, 53-55 (1984).
    • (1984) Science , vol.226 , pp. 53-55
    • Paquin, C.E.1    Williamson, V.M.2
  • 41
    • 0000329809 scopus 로고
    • General methods of sequence comparison
    • Waterman, M.S. General methods of sequence comparison. Bull. Math. Biol. 46, 473-500 (1984).
    • (1984) Bull. Math. Biol. , vol.46 , pp. 473-500
    • Waterman, M.S.1
  • 42
    • 0030801002 scopus 로고    scopus 로고
    • Gapped Blast and Psi-Blast: A new generation of protein database search programs
    • Altschul, S.F. et al. Gapped Blast and Psi-Blast: a new generation of protein database search programs. Nucleic Acids Res. 25, 3389-3402 (1997).
    • (1997) Nucleic Acids Res. , vol.25 , pp. 3389-3402
    • Altschul, S.F.1
  • 44
    • 0025950944 scopus 로고
    • Searching protein-sequence libraries: Comparison of the sensitivity and selectivity of the Smith-Waterman and Fasta algorithms
    • Pearson, W.R. Searching protein-sequence libraries: comparison of the sensitivity and selectivity of the Smith-Waterman and Fasta algorithms. Genomics 11, 635-650 (1991).
    • (1991) Genomics , vol.11 , pp. 635-650
    • Pearson, W.R.1
  • 45
    • 0026458378 scopus 로고
    • Amino-acid substitution matrices from protein blocks
    • Henikoff, S. & Henikoff, J.G. Amino-acid substitution matrices from protein blocks. Proc. Natl Acad. Sci. USA 89, 10915-10919 (1992).
    • (1992) Proc. Natl Acad. Sci. USA , vol.89 , pp. 10915-10919
    • Henikoff, S.1    Henikoff, J.G.2
  • 46
    • 0000122573 scopus 로고
    • PHYLIP (phylogeny inference package) version 3.2
    • Felsenstein, J. PHYLIP (Phylogeny inference package) version 3.2. Cladistics 5, 164-166 (1989).
    • (1989) Cladistics , vol.5 , pp. 164-166
    • Felsenstein, J.1
  • 47
    • 0029563023 scopus 로고
    • A method for estimating the numbers of synonymous and nonsynonymous substitutions per site
    • Comeron, J.M. A method for estimating the numbers of synonymous and nonsynonymous substitutions per site. J. Mol. Evol. 41, 1152-1159 (1995).
    • (1995) J. Mol. Evol. , vol.41 , pp. 1152-1159
    • Comeron, J.M.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.