Towards resolving lamiales relationships: Insights from rapidly evolving chloroplast sequences

BMC Evolutionary Biology

Volumn 10, Issue 1, 2010, Pages

  Schäferhoff, Bastian ^a   Fleischmann, Andreas ^b   Fischer, Eberhard ^c   Albach, Dirk C ^d   Borsch, Thomas ^e   Heubl, Günther ^b   Müller, Kai F ^a  

^a UNIVERSITY OF MÜNSTER   (Germany)

^b UNIVERSITY OF MUNICH   (Germany)

^c Institut für Integrierte Naturwissenschaften   (Germany)

^d UNIVERSITY OF OLDENBURG   (Germany)

^e FREIE UNIVERSITÄT BERLIN   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

CHLOROPLAST; DICOTYLEDON; EVOLUTIONARILY STABLE STRATEGY; GENOME; LIFE HISTORY TRAIT; MITOCHONDRIAL DNA; MORPHOLOGY; PHYLOGENETICS;

BYBLIDACEAE; CALCEOLARIACEAE; CARLEMANNIACEAE; GESNERIACEAE; GRATIOLACEAE; LAMIACEAE; LAMIALES; LENTIBULARIACEAE; LINDERNIACEAE; MAGNOLIOPHYTA; OLEACEAE; PLANTAGINACEAE; PLOCOSPERMATACEAE; SCROPHULARIACEAE; TETRACHONDRACEAE; VERBENACEAE;

PLANT DNA;

ANGIOSPERM; ARTICLE; CHLOROPLAST; CLASSIFICATION; GENETICS; MOLECULAR EVOLUTION; PHYLOGENY;

ANGIOSPERMS; CHLOROPLASTS; DNA, PLANT; EVOLUTION, MOLECULAR; PHYLOGENY;

EID: 78149339000     PISSN: None     EISSN: 14712148     Source Type: Journal    
DOI: 10.1186/1471-2148-10-352     Document Type: Article

References (123)

1. Angiosperm Phylogeny Website. PF Stevens, 2001 http://www.mobot.org/ MOBOT/research/APweb/ Version 7, May 2006
2. Linderniaceae and Gratiolaceae (Lamiales) are further lineages distinct from Scrophulariaceae. R Rahmanzadeh KF Müller E Fischer D Bartels T Borsch, Plant Biology 2005 7 67 78 10.1055/s-2004-830444 15666207
3. Desiccation tolerance studied in the resurrection plant Craterostigma plantagineum. D Bartels, Integr Comp Biol 2005 45 696 701 10.1093/icb/45.5.696 (Pubitemid 43098201)
4. The evolution of prasitism in Scrophulariaceae/Orobanchaceae: plastid gene sequences refute an evolutionary transition series. ND Young KE Steiner CW dePamphilis, Ann MO Bot Gard 1999 86 876 893 10.2307/2666173
5. Parasitic plants as weeds. CR Richies C Parker, Parasitic plants London, UK: Chapman & Hall 1995 226 255
6. Carnivorous plants. FE Lloyd, Massachusetts: Waltham 1942
7. The carnivorous plants. BE Juniper RJ Robins DM Joel, London: Academic press 1989
8. Bau und Entwicklung landbewohnender Utricularia-Arten. J Brugger R Rutishauser, Bot Helv 1989 99 91 146
9. Complementarity and heuristic value of contrasting models in structural botany: 3. Case study on shoot-like "leaves" and leaf-like "shoots" in Utricularia macrorhiza and U. purpurea (Lentibulariaceae). R Rutishauser R Sattler, Bot Jahrb 1989 111 121 137
10. Developmental genetics and morphological evolution of flowering plants, especially Bladderworts (Utricularia): Fuzzy arberian morphology complements classical morphology. R Rutishauser B Isler, Ann Bot 2001 88 1173 1202 10.1006/anbo.2001.1498 (Pubitemid 34115573)
11. First protozoa-trapping plant found. W Barthlott S Porembski E Fischer B Gemmel, Nature 1998 392 447 10.1038/33037 9548248
12. Smallest angiosperm genomes found in Lentibulariaceae, with chromosomes of bacterial size. J Greilhuber T Borsch KF Müller A Worberg S Porembski W Barthlott, Plant Biology 2006 8 770 777 10.1055/s-2006-924101 17203433
13. Evolution of carnivory in Lentibulariaceae and the Lamiales. KF Müller T Borsch L Legendre S Porembski I Theisen W Barthlott, Plant Biology 2004 6 477 490 10.1055/s-2004-817909 15248131
14. Recent progress in understanding the evolution of Lentibulariaceae. KF Müller T Borsch L Legendre S Porembski W Barthlott, Plant Biology 2006 8 748 757 10.1055/s-2006-924706 17203430
15. Carnivory of Byblis revisited-A simple method for enzyme testing on carnivorous plants. S Hartmeyer, Carniv Pl Newslett 1997 26 34 38
16. Fluorescence labelling of phosphatase activity in digestive glands of carnivorous plants. BJ Plachno L Adamec IK Lichtscheidl M Peroutka W Adlassnig J Vrba, Plant Biology 2006 8 813 820 10.1055/s-2006-924177 16865659
17. Untersuchungen über Morphologie, Anatomie und Samenentwicklung von Polypompholyx und Byblis gigantea. F Lang, Flora 1901 149 206
18. The embryology and relationships of the Byblidaceae. JG Conran, Aust Sys Bot 1996 9 243 254 10.1071/SB9960243
19. Carnivorous plants: Phylogeny and structural evolution. VA Albert SE Williams MW Chase, Science 1992 257 1491 1495 10.1126/science.1523408 1523408
20. Philcoxia: A new genus of Scrophulariaceae with three new species from Eastern Brazil. P Taylor VC Souza AM Giulietti RM Harley, Kew Bulletin 2000 55 155 163 10.2307/4117770
21. Rediscovery and phylogenetic placement of Philcoxia minensis (Plantaginaceae), with a test of carnivory. P Fritsch F Almeda AB Martins BC Cruz D Estes, Proc Calif Acad Sci 2007 58 447 467
22. Piecing together the "new" Plantaginaceae. DC Albach HM Meudt B Oxelman, Am J Bot 2005 92 297 315 10.3732/ajb.92.2.297
23. Phylogenetic relationships among Acanthaceae: evidence from noncoding trnL-trnF chloroplast DNA sequences. LA McDade ML Moody, Am J Bot 1999 86 70 80 10.2307/2656956
24. A parsimony analysis of the Asteridae s.l. based on rbcL sequences. RG Olmstead B Bremer KM Scott JD Palmer, Ann MO Bot Gard 1993 80 700 722 10.2307/2399855
25. The phylogeny of the Asteridae sensu lato based on chloroplast ndhF gene sequences. RG Olmstead KJ Kim RK Jansen SJ Wagstaff, Mol Phylogenet Evol 2000 16 96 112 10.1006/mpev.1999.0769 10877943
26. Phylogenetics of asterids based on 3 coding and 3 non-coding chloroplast DNA markers and the utility of non-coding DNA at higher taxonomic levels. B Bremer K Bremer N Heidari P Erixon RG Olmstead AA Anderberg M Källersjö E Barkhordarian, Mol Phylogenet Evol 2002 24 274 301 10.1016/S1055-7903(02)00240-3 12144762
27. Phylogeny and evolution of angiosperms. DE Soltis PS Soltis PK Endress MW Chase, Sunderland, Massachusetts, USA: Sinauer Associates 2005
28. An update of the Angiosperm Phylogeny Group classification for the orders and families of flowering plants: APG III. APG III, Bot J Linn Soc 2009 161 105 121 10.1111/j.1095-8339.2009.00996.x
29. Systematische Botanik. G Dahlgren (ed), Berlin Heidelberg New York: Springer 1987
30. Diversity and Classification of Flowering Plants. A Takhtajan, New York: Columbia University Press 1997
31. Inferring phylogenies with incomplete data sets: a 5-gene, 567-taxon analysis of angiosperms. JG Burleigh K Hilu D Soltis, BMC Evol Biol 2009 9 61 10.1186/1471-2148-9-61 19292928
32. Relationships within Cornales and circumscription of Cornaceae - matK and rbcL sequence data and effects of outgroups and long branches. Q Xiang ML Moody DE Soltis CZ Fan PS Soltis, Mol Phylogenet Evol 2002 24 35 57 10.1016/S1055-7903(02)00267-1 12128027
33. Phylogenetic analyses of Cornales based on 26S rRNA and combined 26S rDNA-matK-rbcL sequence data. C Fan Q Xiang, Am J Bot 2003 90 1357 1372 10.3732/ajb.90.9.1357
34. Implications of rbcL sequence data for higher order relationships of the Loasaceae and the anomalous aquatic plant Hydrostachys (Hydrostachyaceae). A Hempel PA Reeves R Olmstead RK Jansen, Plant Syst Evol 1994 194 25 37 10.1007/BF00983214
35. Angiosperm phylogeny based on matK sequence information. KW Hilu T Borsch KF Müller DE Soltis PS Soltis V Savolainen M Chase M Powell LA Alice R Evans H Sauquet C Neinhuis TA Slotta JG Rohwer CS Campbell L Chatrou, Am J Bot 2003 90 1758 1776 10.3732/ajb.90.12.1758
36. Phylogeny of the eudicots: a nearly complete familial analysis based on rbcL gene sequences. V Savolainen MF Fay DC Albach A Backlund M Van der Bank KM Cameron LA Johnson MD Lledá J- Pintaud M Powell MC Sheaham DE Soltis PS Soltis P Weston WM Whitten KJ Wurdack MW Chase, Kew Bulletin 2000 55 257 309 10.2307/4115644
37. L. A. S. JOHNSON REVIEW No. 7. Review of the systematics of Scrophulariaceae s.l. and their current disposition. DC Tank PM Beardsley SA Kelchner RG Olmstead, Aust J Bot 2006 19 289 307 10.1071/SB05009 (Pubitemid 44290063)
38. Disintegration of the Scrophulariaceae. RG Olmstead CW DePamphilis AD Wolfe ND Young WJ Elisons PA Reeves, Am J Bot 2001 88 348 361 10.2307/2657024 11222255
39. Further disintegration of Scrophulariaceae. B Oxelman P Kornhall RG Olmstead B Bremer, Taxon 2005 54 411 425 10.2307/25065369
40. How much data are needed to resolve a difficult phylogeny? Case study in Lamiales. AH Wortley PJ Rudall DJ Harris RW Scotland, Syst Biol 2005 54 697 709 10.1080/10635150500221028 16195214
41. On the phylogeny of the genus Calceolaria (Calceolariaceae) as inferred from ITS and plastid matK sequences. S Andersson, Taxon 2006 55 125 137 10.2307/25065534
42. On the Taxonomy and Phylogenetic Position of Thomandersia. AH Wortley DJ Harris RW Scotland, Syst Botany 2007 32 415 444 10.1600/036364407781179716 (Pubitemid 47052477)
43. Familial placement and relations of Rehmannia and Triaenophora (Scrophulariaceae s.l.) inferred from five gene regions. Z Xia Y Wang JF Smith, Am J Bot 2009 96 519 530 10.3732/ajb.0800195
44. Scrophulariaceae. E Fischer, The Families and Genera of Vascular Plants Berlin: Springer, Kubitzki K, 2004 333 432
45. Evidence for the polyphyly of the Scrophulariaceae based on chloroplast rbcL and ndhF sequences. RG Olmstead PA Reeves, Ann MO Bot Gard 1995 82 176 193 10.2307/2399876
46. An update of the Angiosperm Phylogeny Group classification for the orders and families of flowering plants: APG II. APG2, Bot J Linn Soc 2003 141 399 436 10.1046/j.1095-8339.2003.t01-1-00158.x (Pubitemid 36463424)
47. Evolution of plastid gene rps2 in a lineage of hemiparasitic and holoparasitic plants: many losses of photosynthesis and complex patterns of rate variation. CW dePamphilis ND Young AD Wolfe, Proc Natl Acad Sci USA 1997 94 7367 7372 10.1073/pnas.94.14.7367 9207097
48. The effect of relaxed functional constraints on the photosynthetic gene rbcL in photosynthetic and nonphotosynthetic parasitic plants. A Wolfe C dePamphilis, Mol Biol Evol 1998 15 1243 1258 9787431
49. Phylogeny of the parasitic plant family Orobanchaceae inferred from phytochrome A. JR Bennett S Mathews, Am J Bot 2006 93 1039 1051 10.3732/ajb.93.7.1039
50. Phylogenetic placement of Triaenophora (formerly Scrophulariaceae) with some implications for the phylogeny of Lamiales. DC Albach K Yan SR Jensen H Li, Taxon 2009 58 749 756
51. Redefining Phrymaceae: The placement of Mimulus, tribe Mimuleae, and Phryma. PM Beardsley RG Olmstead, Am J Bot 2002 89 1093 1102 10.3732/ajb.89.7.1093
52. The morphology of false anthers in Craterostigma plantagineum and Torenia polygonioides (Scrophulariaceae). N Magin R Classen C Gack, Can J Bot 1989 67 1931 1937 10.1139/b89-245
53. Systematik der afrikanischen Lindernieae (Scrophulariaceae). E Fischer, Trop Subtrop Pflanzenwelt 1992 82 1 365
54. Phylogenetic analysis of Bignoniaceae based on the cpDNA gene sequences rbcL and ndhF. RE Spangler RG Olmstead, Ann MO Bot Gard 1999 86 33 46 10.2307/2666216
55. Classes, Ordines, Familiae, Subfamiliae, Tribus, Genera nov quae attinet ad plantas Koreanas. T Nakai, J Jap Bot 1949 24 8 14
56. Newly required suprageneric names in vascular plants. J Reveal, Phytologia 1995 79 68 76
57. Phylogenetic utility of rapidly evolving DNA at high taxonomical levels: Contrasting matK, trnT-F, and rbcL in basal angiosperms. KF Müller T Borsch KW Hilu, Mol Phylogenet Evol 2006 41 99 117 10.1016/j.ympev.2006.06.017 16904914
58. Non-coding plastid trnT-trnF sequences reveal a well resolved phylogeny of basal angiosperms. T Borsch KW Hilu D Quandt V Wilde C Neinhuis W Barthlott, J Evol Biol 2003 16 558 576 10.1046/j.1420-9101.2003.00577.x 14632220
59. Phylogeny of basal eudicots: Insights from non-coding and rapidly evolving DNA. A Worberg D Quandt A- Barniske C Löhne KW Hilu T Borsch, Org Divers Evol 2007 7 55 77 10.1016/j.ode.2006.08.001 (Pubitemid 46442905)
60. Mutational dynamics and phylogenetic utility of noncoding chloroplast DNA. T Borsch D Quandt, Plant Syst Evol 2009 282 169 199 10.1007/s00606-009- 0210-8
61. Basic local alignment search tool. SF Altschul W Gish W Miller EW Myers DJ Lipman, J Mol Biol 1990 215 403 410 2231712
62. A phylogenetic analysis of Hydrangeaceae based on sequences of the plastid gene matk and their combination with rbcl and morphological data. L Hufford ML Moody DE Soltis, Int J Plant Sci 2001 162 835 846 10.1086/320789 (Pubitemid 32550544)
63. Phylogenetic analysis of asterids based on sequences of four genes. DC Albach PS Soltis DE Soltis RG Olmstead, Ann MO Bot Gard 2001 88 163 212 10.2307/2666224
64. PhyDE - Phylogenetic Data Editor. J Müller KF Müller C Neinhuis D Quandt, 2006 http://www.phyde.de
65. The evolution of non-coding chloroplast DNA and its application in plant systematics. SA Kelchner, Ann MO Bot Gard 2000 87 482 498 10.2307/2666142
66. Gaps as characters in sequence-based phylogenetic analyses. MP Simmons H Ochoterena, Syst Biol 2000 49 369 381 10.1093/sysbio/49.2.369 12118412
67. SeqState: Primer design and sequence statistics for phylogenetic DNA datasets. KF Müller, Appl Bioinformatics 2005 4 65 69 10.2165/00822942- 200504010-00008 16000015
68. PRAP - computation of Bremer support for large data sets. KF Müller, Mol Phylogenet Evol 2004 31 780 782 10.1016/j.ympev.2003.12.006 15062810
69. PAUP*. Phylogenetic Analysis Using Parsimony (* and other Methods). DL Swofford, Sinauer Associates, Sunderland, Massachussets 1998
70. The efficiency of different search strategies in estimating parsimony jackknife, bootstrap, and Bremer support. KF Müller, BMC Evol Biol 2005 5 58 10.1186/1471-2148-5-58 16255783
71. MrBayes 3: Bayesian phylogenetic inference under mixed models. F Ronquist JP Huelsenbeck, Bioinformatics 2003 19 1572 1574 10.1093/bioinformatics/btg180 12912839
72. jModelTest: phylogenetic model averaging. D Posada, Mol Biol Evol 2008 25 1253 1256 10.1093/molbev/msn083 18397919
73. Tracer. Rambaut Andrew Drummond J Alexei, Edinburgh: Institute for Evolutionary Biology 2009
74. RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. A Stamatakis, Bioinformatics 2006 22 2688 2690 10.1093/bioinformatics/btl446 16928733
75. TreeGraph 2: Combining and visualizing evidence from different phylogenetic analyses. B Stöver KF Müller, BMC Bioinformatics 2010 11 7 10.1186/1471-2105-11-7 20051126
76. An approximately unbiased test of phylogenetic tree selection. H Shimodaira, Syst Biol 2002 51 492 508 10.1080/10635150290069913 12079646 (Pubitemid 35180700)
77. Multiple comparisons of log-likelihoods with applications to phylogenetic inference. H Shimodaira M Hasegawa, Mol Biol Evol 1999 16 1114 1116
78. CONSEL: for assessing the confidence of phylogenetic tree selection. H Shimodaira M Hasegawa, Bioinformatics 2001 17 1246 1247 10.1093/bioinformatics/ 17.12.1246 11751242
79. The families of flowering plants: descriptions, illustrations, identification, and information retrieval. L Watson M Dallwitz, 1992
80. The plant-book: a portable dictionary of the vascular plants. D Mabberley, Cambridge: Cambridge University Press 2008
81. Bayesian Estimation of Ancestral Character States on Phylogenies. M Pagel A Meade D Barker, Systematic Biology 2004 53 673 684 10.1080/10635150490522232 15545248
82. The major clades of Loasaceae: Phylogenetic analysis using the plastid matK and trnL-trnF regions. L Hufford MM McMahon AM Sherwood G Reeves MW Chase, Am J Bot 2003 90 1215 1228 10.3732/ajb.90.8.1215
83. Zur Frage der systematischen Stellung der Hydrostachyaceae auf Grund ihrer Embryologie, Blüten-und Infloreszenzmorphologie. I Jäger-Zürn, Plant Syst Evol 1965 112 621 639 10.1007/BF01373191
84. Angiosperm phylogeny inferred from 18S rDNA, rbcL, and atpB sequences. DE Soltis PS Soltis MW Chase ME Mort DC Albsch M Zanis V Savolainen WH Hahn SB Hoot MF Fay M Axtell SM Swensen LM Prince WJ Kress KC Nixon JS Farris, Bot J Linn Soc 2000 133 81 381 -461
85. Phylogenetic placement of the enigmatic angiosperm Hydrostachys. D Albach, Taxon 2001 50 781 805 10.2307/1223707
86. Veronica: Iridoids and cornoside as chemosystematic markers. SR Jensen DC Albach T Ohno RJ Grayer, Biochem Syst Ecol 2005 33 1031 1047 10.1016/j.bse.2005.03.001 (Pubitemid 40938584)
87. Tribal Relationships in the Gesneriaceae: evidence from DNA sequences of the chloroplast gene ndhF. JF Smith JC Wolfram KD Brown CL Carroll DS Denton, Ann MO Bot Gard 1997 84 50 66 10.2307/2399953
88. Gesneriaceae. G Bentham, Genera Plantarum 2, Bentham G, Hooker JD, 1876 990 1025 Reeve
89. Phylogenetic relationships of the monotypic genus Amphianthus (Plantaginaceae tribe Gratioleae) inferred from chloroplast DNA sequences. D Estes RL Small, Syst Botany 2008 33 176 182 10.1600/036364408783887375 (Pubitemid 351500251)
90. Phylogeny and Evolution of Angiosperms. DE Soltis PS Soltis PK Endress MW Chase, 2005
91. Cases in which parsimony or compatibility methods will be positively misleading. J Felsenstein, Syst Biol 1978 27 401 410
92. Toward a comprehensive understanding of phylogenetic relationships among lineages of Acanthaceae s.l. (Lamiales). LA McDade TF Daniel CA Kiel, Am J Bot 2008 95 1136 1152 10.3732/ajb.0800096
93. Mineral nutrient uptake from prey and glandular phosphatase activity as a dual test of carnivory in semi-desert plants with glandular leaves suspected of carnivory. BJ Plachno L Adamec H Huet, Ann Bot-London 2009 104 649 654 10.1093/aob/mcp155
94. Reassessing commensal-enabled carnivory in Proboscidea and Ibicella? B Rice, Carniv Pl Newslett 2008 15 19
95. rbcL sequences support exclusion of Retzia, Desfontainia, and Nicodemia from the Gentianales. B Bremer RG Olmstead L Struwe JA Sweere, Plant Syst Evol 1994 190 213 230 10.1007/BF00986194
96. Relationships of the Buddlejaceae s.l. investigated using parsimony jackknife and branch support analysis of chloroplast ndhF and rbcL sequence data. B Oxelman M Backlund B Bremer, Syst Botany 1999 24 164 182 10.2307/2419547
97. The Evolution and Classification of Flowering Plants. A Cronquist, New York: The New York Botanical Garden 2 1988
98. Labiatae. J Briquet, Die natürlichen Pflanzenfamilien Leipzig: Engelmann, Engler A, Prantl K, 1895 4/3a 132 182
99. Evidence for a polyphyletic origin of the Labiatae. PD Cantino, Ann MO Bot Gard 1992 361 379 10.2307/2399774
100. Phylogeny in Labiatae s.l., inferred from cpDNA sequences. SJ Wagstaff L Hickerson R Spangler PA Reeves RG Olmstead, Plant Syst Evol 1998 209 265 274 10.1007/BF00985232
101. Floral anatomy of Thomandersia (Lamiales), with particular reference to the nature of the retinaculum and extranuptial nectaries. AH Wortley RW Scotland PJ Rudall, Bot J Linn Soc 2005 149 469 10.1111/j.1095-8339.2005.00507.x (Pubitemid 41784065)
102. Calceolariaceae: floral development and systematic implications. EM Mayr A Weber, Am J Bot 2006 93 327 343 10.3732/ajb.93.3.327
103. Floral morphology and development in Aragoa (Plantaginaceae) and related members of the order Lamiales. MA Bello PJ Rudall F Gonzlez JL Fernndez-Alonso, Int J Plant Sci 2004 165 723 738 10.1086/422046
104. Evolution of Veroniceae: A phylogenetic perspective. DC Albach MM Martinez-Ortega MA Fischer MW Chase, Ann MO Bot Gard 2004 91 275 302
105. Symmetry in flowers: diversity and evolution. P Endress, Int J Plant Sci 1999 160 3 S23 10.1086/314211 10572019
106. Das alveolierte Endosperm bei Scrophulariaceen, seine Entstehung, Anatomie und taxonomische Bedeutung. D Hartl, Beiträge zur Biologie der Pflanzen 1959 35 95 110
107. Estimating absolute rates of molecular evolution and divergence times: a penalized likelihood approach. MJ Sanderson, Mol Biol Evol 2002 19 101 109 11752195
108. Evolution of the angiosperms: calibrating the family tree. N Wikström V Savolainen MW Chase, Proc R Soc Lond [Biol] 2001 268 2211 2220 10.1098/rspb.2001.1782 (Pubitemid 33032897)
109. Molecular phylogenetic dating of asterid flowering plants shows early Cretaceous diversification. K Bremer EM Friis B Bremer, Syst Biol 2004 53 496 505 10.1080/10635150490445913 15503676
110. Rapid radiation of Impatiens (Balsaminaceae) during Pliocene and Pleistocene: Result of a global climate change. SB Janssens EB Knox S Huysmans EF Smets VS Merckx, Mol Phylogenet Evol 2009 52 806 824 10.1016/j.ympev.2009.04. 013 19398024
111. Angiosperm diversification through time. S Magallon A Castillo, Am J Bot 2009 96 349 365 10.3732/ajb.0800060
112. Increased taxon sampling greatly reduces phylogenetic error. DJ Zwickl DM Hillis, Syst Biol 2002 51 588 598 10.1080/10635150290102339 12228001
113. Evolution of biogeographic disjunction between eastern Asia and eastern North America in Phryma (Phrymaceae). Z Nie H Sun PM Beardsley RG Olmstead J Wen, American Journal of Botany 2006 93 1343 1356 10.3732/ajb.93.9.1343
114. A fossil Byblidaceae seed from Eocene South Australia. JG Conran DC Christophel, Int J Plant Sci 2004 165 691 694 10.1086/386555
115. Tertiary Flowers, Fruits, and Seeds of Washington State and Adjacent Areas-Part III. KB Pigg WC Wehr, Wash Geol 2002 30 3 16
116. Palynology of tertiary sediments from tropical areas. J Germeraad C Hopping J Muller, Review of Palaeobotany and Palynology 1968 6 189 198 200-210, 212-228, 230-259, 261, 263-348 10.1016/0034-6667(68)90051-1
117. The Late Oligocene Creede Flora, Colorado. DI Axelrod, Berkeley, Los Angeles, London: University of California Press 1987 130
118. Analysis of 81 genes from 64 plastid genomes resolves relationships in angiosperms and identifies genome-scale evolutionary patterns. RK Jansen Z Cai LA Raubeson H Daniell CW dePamphilis J Leebens-Mack KF Müller M Guisinger-Bellian RC Haberle AK Hansen TW Chumley S Lee R Peery JR McNeal JV Kuehl JL Boore, Proc Natl Acad Sci USA 2007 104 19369 19374 10.1073/pnas. 0709121104 18048330
119. The deepest divergences in land plants inferred from phylogenomic evidence. Y Qiu L Li B Wang Z Chen V Knoop M Groth-Malonek O Dombrovska J Lee L Kent J Rest GF Estabrook TA Hendry DW Taylor CM Testa M Ambros B Crandall-Stotler RJ Duff M Stech W Frey D Quandt CC Davis, Proc Natl Acad Sci USA 2006 103 15511 15516 10.1073/pnas.0603335103 17030812
120. Phylogenetic inference in Saxifragaceae s.str. and Gilia (Polemoniaceae) using matK sequences. LA Johnson DE Soltis, Ann MO Bot Gard 1995 82 149 175 10.2307/2399875
121. Phylogenetics of Amaranthaceae based on matK/trnK sequence data evidence from parsimony, likelihood, and Bayesian analyses. KF Müller T Borsch, Ann MO Bot Gard 2005 92 66 102
122. Universal primers for amplification of 3 noncoding regions of chloroplast DNA. P Taberlet L Gielly G Pautou J Bouvet, Plant Mol Biol 1991 17 1105 1109 10.1007/BF00037152 1932684
123. Chloroplast rps16 intron phylogeny of the tribe Sileneae (Caryophyllaceae). B Oxelman M Lidén D Berglund, Plant Syst Evol 1997 206 393 410 10.1007/BF00987959