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Volumn 90, Issue 8, 2003, Pages 1215-1228

The major clades of Loasaceae: Phylogenetic analysis using the plastid matK and trnL-trnF regions

Author keywords

Loasaceae; Maximum likelihood; Parsimony; Phylogeny; Shimodaira Hasegawa (SH) test; Systematics

Indexed keywords

MAXIMUM LIKELIHOOD ANALYSIS; PARSIMONY ANALYSIS; PHYLOGENY; TAXONOMY;

EID: 0041926467     PISSN: 00029122     EISSN: None     Source Type: Journal    
DOI: 10.3732/ajb.90.8.1215     Document Type: Article
Times cited : (48)

References (67)
  • 1
    • 0000937386 scopus 로고
    • Evolution of desert vegetation in western North America
    • AXELROD, D. I. 1950. Evolution of desert vegetation in western North America. Carnegie Institute of Washington Publication 590: 215-306.
    • (1950) Carnegie Institute of Washington Publication , vol.590 , pp. 215-306
    • Axelrod, D.I.1
  • 5
    • 0000367652 scopus 로고
    • The limits of amino acid sequence data in angiosperm phylogenetic reconstruction
    • BREMER, K. 1988. The limits of amino acid sequence data in angiosperm phylogenetic reconstruction. Evolution 42: 795-803.
    • (1988) Evolution , vol.42 , pp. 795-803
    • Bremer, K.1
  • 7
    • 0036623259 scopus 로고    scopus 로고
    • Model misspecification and probabilistic tests of topology; evidence from empirical data sets
    • BUCKLEY, T. R. 2002. Model misspecification and probabilistic tests of topology; evidence from empirical data sets. Systematic Biology 51: 509-523.
    • (2002) Systematic Biology , vol.51 , pp. 509-523
    • Buckley, T.R.1
  • 8
    • 0035143485 scopus 로고    scopus 로고
    • Evaluating hypotheses on the origin and evolution of the New Zealand alpine cicadas (Maoricicada) using multiple-comparison tests of tree topology
    • BUCKLEY, T. R., C. SIMON, H. SHIMODAIRA, AND G. K. CHAMBERS. 2001. Evaluating hypotheses on the origin and evolution of the New Zealand alpine cicadas (Maoricicada) using multiple-comparison tests of tree topology. Molecular Biology and Evolution 18: 223-234.
    • (2001) Molecular Biology and Evolution , vol.18 , pp. 223-234
    • Buckley, T.R.1    Simon, C.2    Shimodaira, H.3    Chambers, G.K.4
  • 9
    • 0042820686 scopus 로고
    • The biota of the intermountain region in a geohistorical context
    • CRONQUIST, A. 1978. The biota of the intermountain region in a geohistorical context. Great Basin Naturalist Memoirs 2: 3-15.
    • (1978) Great Basin Naturalist Memoirs , vol.2 , pp. 3-15
    • Cronquist, A.1
  • 13
    • 0042820684 scopus 로고
    • A revision of Petalonyx (Loasaceae) with a consideration of affinities of subfamily Gronovioideae
    • DAVIS, W. S., AND H. J. THOMPSON. 1967. A revision of Petalonyx (Loasaceae) with a consideration of affinities of subfamily Gronovioideae. Madroño 19: 1-18.
    • (1967) Madroño , vol.19 , pp. 1-18
    • Davis, W.S.1    Thompson, H.J.2
  • 15
    • 0342915471 scopus 로고
    • On the morphological constitution of the androecium of Mentzelia, and its analogy with that of certain Rosaceae
    • DICKSON, A. 1866. On the morphological constitution of the androecium of Mentzelia, and its analogy with that of certain Rosaceae. Transactions of the Botanical Society of Edinburgh 8: 288-298.
    • (1866) Transactions of the Botanical Society of Edinburgh , vol.8 , pp. 288-298
    • Dickson, A.1
  • 17
    • 0002594984 scopus 로고
    • A rapid DNA isolation procedure for small quantities of fresh leaf tissue
    • DOYLE, J. J., AND J. L. DOYLE. 1987. A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochemical Bulletin 19: 11-15.
    • (1987) Phytochemical Bulletin , vol.19 , pp. 11-15
    • Doyle, J.J.1    Doyle, J.L.2
  • 18
    • 85039651350 scopus 로고
    • Beck, Vienna, Austria
    • ENDLICHER, S. L. 1841. Genera Plantarum, Supplement 1. Beck, Vienna, Austria.
    • (1841) Genera Plantarum , Issue.1 SUPPL.
    • Endlicher, S.L.1
  • 21
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • FELSENSTEIN, J. 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39: 783-791.
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 22
    • 0042694999 scopus 로고
    • Sertum polynesicum. I. Plakothira Florence (Loasaceae), genre nouveau des îles Marquises
    • FLORENCE, J. 1985. Sertum polynesicum. I. Plakothira Florence (Loasaceae), genre nouveau des îles Marquises. Adansonia 1: 239-245.
    • (1985) Adansonia , vol.1 , pp. 239-245
    • Florence, J.1
  • 23
    • 0012393256 scopus 로고
    • Loasaceae
    • A. Engler and K. Prantl [eds.]. Engelmann, Leipzig, Germany
    • GILG, E. 1895. Loasaceae. In A. Engler and K. Prantl [eds.], Die natürlichen Pflanzenfamilien, 3 (6a), 100-121. Engelmann, Leipzig, Germany.
    • (1895) Die Natürlichen Pflanzenfamilien , vol.3 , Issue.6 A , pp. 100-121
    • Gilg, E.1
  • 24
    • 0042319503 scopus 로고
    • Loasaceae
    • A. Engler and K. Prantl [eds.]. Engelmann, Leipzig, Germany
    • GILG, E. 1925. Loasaceae. In A. Engler and K. Prantl [eds.], Die natürlichen Pflanzenfamilien, 2nd ed., 21, 522-543. Engelmann, Leipzig, Germany.
    • (1925) Die Natürlichen Pflanzenfamilien, 2nd Ed. , vol.21 , pp. 522-543
    • Gilg, E.1
  • 25
    • 0034351387 scopus 로고    scopus 로고
    • Likelihood-based tests of topologies in phylogenetics
    • GOLDMAN, N., J. P. ANDERSON, AND A. G. RODRIGO. 2000. Likelihood-based tests of topologies in phylogenetics. Systematic Biology 49: 652-670.
    • (2000) Systematic Biology , vol.49 , pp. 652-670
    • Goldman, N.1    Anderson, J.P.2    Rodrigo, A.G.3
  • 26
    • 0002754117 scopus 로고
    • History of the vegetation: Cretaceous (Maastichtian)-Tertiary
    • Flora of North America Editorial Committee [eds.]. Oxford University Press, Oxford, UK
    • GRAHAM, A. 1993. History of the vegetation: Cretaceous (Maastichtian)-Tertiary. In Flora of North America Editorial Committee [eds.], Flora of North America, vol. 1, 57-70. Oxford University Press, Oxford, UK.
    • (1993) Flora of North America , vol.1 , pp. 57-70
    • Graham, A.1
  • 27
    • 0041317984 scopus 로고    scopus 로고
    • Huidobria, eine isolierte Gattung der Loasaceae aus Chile
    • GRAU, J. 1997. Huidobria, eine isolierte Gattung der Loasaceae aus Chile. Sendtnera 4: 77-93.
    • (1997) Sendtnera , vol.4 , pp. 77-93
    • Grau, J.1
  • 28
    • 0036005518 scopus 로고    scopus 로고
    • A molecular phylogenetic study of the Palmae (Arecaceae) based on atpB, rbcL and 18S nr DNA sequences
    • HAHN, 2002. A molecular phylogenetic study of the Palmae (Arecaceae) based on atpB, rbcL and 18S nr DNA sequences. Systematic Biology 51: 92-112.
    • (2002) Systematic Biology , vol.51 , pp. 92-112
    • Hahn1
  • 30
    • 0042319500 scopus 로고    scopus 로고
    • Derivation of a florally diverse genus, Eucnide, from within Mentzelia
    • Abstract
    • HEMPEL, A. L., AND R. K. JANSEN. 1996. Derivation of a florally diverse genus, Eucnide, from within Mentielia. American Journal of Botany 83(suppl.): 162 (Abstract).
    • (1996) American Journal of Botany , vol.83 , Issue.SUPPL. , pp. 162
    • Hempel, A.L.1    Jansen, R.K.2
  • 31
    • 0029165602 scopus 로고
    • Implications of rbcL sequence data for higher order relationships of the Loasaceae and the anomalous aquatic plant Hydrostachys (Hydrostachyaceae)
    • HEMPEL, A., P. A. REEVES, R. G. OLMSTEAD, AND R. K. JANSEN. 1995. Implications of rbcL sequence data for higher order relationships of the Loasaceae and the anomalous aquatic plant Hydrostachys (Hydrostachyaceae). Plant Systematics and Evolution 194: 25-37.
    • (1995) Plant Systematics and Evolution , vol.194 , pp. 25-37
    • Hempel, A.1    Reeves, P.A.2    Olmstead, R.G.3    Jansen, R.K.4
  • 32
    • 0001374944 scopus 로고
    • Beiträge zur morphologie polyandrischer blüten
    • HIRMER, M. 1916. Beiträge zur Morphologie polyandrischer Blüten. Flora 110: 140-192.
    • (1916) Flora , vol.110 , pp. 140-192
    • Hirmer, M.1
  • 34
    • 0041317983 scopus 로고
    • Systematics of Loasaceae: A consideration of familial circumscription and a cladistic analysis of generic relationships
    • HUFFORD, L. 1988. Systematics of Loasaceae: a consideration of familial circumscription and a cladistic analysis of generic relationships. American Journal of Botany 75(suppl.): 181.
    • (1988) American Journal of Botany , vol.75 , Issue.SUPPL. , pp. 181
    • Hufford, L.1
  • 35
    • 0000586925 scopus 로고
    • Androecial development and the problem of monophyly of Loasaceae
    • HUFFORD, L. 1990. Androecial development and the problem of monophyly of Loasaceae. Canadian Journal of Botany 68: 402-419.
    • (1990) Canadian Journal of Botany , vol.68 , pp. 402-419
    • Hufford, L.1
  • 36
    • 0034968699 scopus 로고    scopus 로고
    • A phylogenetic analysis of Hydrangeaceae based on sequences of the plastid gene matK and their combination with rbcL and morphological data
    • HUFFORD, L., M. L. MOODY, AND D. E. SOLTIS. 2001. A phylogenetic analysis of Hydrangeaceae based on sequences of the plastid gene matK and their combination with rbcL and morphological data. International Journal of Plant Sciences 162: 835-846.
    • (2001) International Journal of Plant Sciences , vol.162 , pp. 835-846
    • Hufford, L.1    Moody, M.L.2    Soltis, D.E.3
  • 37
    • 0000890115 scopus 로고
    • Phylogenetic inference in Saxifragaceae sensu sticto and Cilia (Polemoniaceae) using matK sequences
    • JOHNSON, L. A., AND D. E. SOLTIS. 1995. Phylogenetic inference in Saxifragaceae sensu sticto and Cilia (Polemoniaceae) using matK sequences. Annals of the Missouri Botanical Garden 82: 149-175.
    • (1995) Annals of the Missouri Botanical Garden , vol.82 , pp. 149-175
    • Johnson, L.A.1    Soltis, D.E.2
  • 38
    • 0025181359 scopus 로고
    • Maximum likelihood inference of protein phylogeny and the origin of chloroplasts
    • KISHINO, H., T. MIYATA, AND M. HASEGAWA. 1990. Maximum likelihood inference of protein phylogeny and the origin of chloroplasts. Journal of Molecular Evolution 30: 151-160.
    • (1990) Journal of Molecular Evolution , vol.30 , pp. 151-160
    • Kishino, H.1    Miyata, T.2    Hasegawa, M.3
  • 39
    • 0036005516 scopus 로고    scopus 로고
    • Molecular systematics of the eastern fence lizard (Soeloporus undulatus): A comparison of parsimony, likelihood, and Bayesian approaches
    • LEACHÉ, A. D., AND T. W. REEDER. 2002. Molecular systematics of the eastern fence lizard (Soeloporus undulatus): a comparison of parsimony, likelihood, and Bayesian approaches. Systematic Biology 51: 44-68.
    • (2002) Systematic Biology , vol.51 , pp. 44-68
    • Leaché, A.D.1    Reeder, T.W.2
  • 40
    • 0000710766 scopus 로고
    • Entwicklungsgeschichtliche studien an Loasaceen blüten
    • LEINS, P., AND W. WINHARD. 1973. Entwicklungsgeschichtliche Studien an Loasaceen Blüten. Oesterreichische Botanische Zeitschrift 122: 145-165.
    • (1973) Oesterreichische Botanische Zeitschrift , vol.122 , pp. 145-165
    • Leins, P.1    Winhard, W.2
  • 41
    • 0033710263 scopus 로고    scopus 로고
    • Floral ontogeny and morphology of Cevallia, Fuertesia, and Gronovia (Loasaceae subfamily Gronovioideae)
    • MOODY, M. L., AND L. HUFFORD. 2000. Floral ontogeny and morphology of Cevallia. Fuertesia, and Gronovia (Loasaceae subfamily Gronovioideae). International Journal of Plant Sciences 161: 869-883.
    • (2000) International Journal of Plant Sciences , vol.161 , pp. 869-883
    • Moody, M.L.1    Hufford, L.2
  • 42
    • 0000719266 scopus 로고    scopus 로고
    • Phylogenetic relationships of Loasaceae subfamily Gronovioideae inferred from matK and ITS sequence data
    • MOODY, M. L., L. HUFFORD, D. E. SOLTIS, AND P. S. SOLTIS. 2001. Phylogenetic relationships of Loasaceae subfamily Gronovioideae inferred from matK and ITS sequence data. American Journal of Botany 88: 326-336.
    • (2001) American Journal of Botany , vol.88 , pp. 326-336
    • Moody, M.L.1    Hufford, L.2    Soltis, D.E.3    Soltis, P.S.4
  • 45
    • 0031773680 scopus 로고    scopus 로고
    • Modeltest: Testing the model of DNA substitution
    • POSADA, D., AND K. A. CRANDALL. 1998. Modeltest: testing the model of DNA substitution. Bioinformatics 14: 817-818.
    • (1998) Bioinformatics , vol.14 , pp. 817-818
    • Posada, D.1    Crandall, K.A.2
  • 46
    • 0000615574 scopus 로고
    • Pollen morphology, trichome types, and relationships of the Gronovioideae (Loasaceae)
    • POSTON, M. E., AND J. W. NOWICKE. 1993. Pollen morphology, trichome types, and relationships of the Gronovioideae (Loasaceae). American Journal of Botany 80: 689-704.
    • (1993) American Journal of Botany , vol.80 , pp. 689-704
    • Poston, M.E.1    Nowicke, J.W.2
  • 47
    • 0041818647 scopus 로고
    • Cytotaxonomic observations in Loasaceae subfamily Loasoideae
    • POSTON, M. E., AND H. J. THOMPSON. 1977. Cytotaxonomic observations in Loasaceae subfamily Loasoideae. Systematic Botany 2: 28-35.
    • (1977) Systematic Botany , vol.2 , pp. 28-35
    • Poston, M.E.1    Thompson, H.J.2
  • 50
    • 84981626018 scopus 로고
    • The distribution and the systematic relevance of the androecial characters oligomery and polymery in the Magnoliophytina
    • RONSE-DECRAENE, L.-P., AND E. SMETS. 1987. The distribution and the systematic relevance of the androecial characters oligomery and polymery in the Magnoliophytina. Nordic Journal of Botany 7: 239-253.
    • (1987) Nordic Journal of Botany , vol.7 , pp. 239-253
    • Ronse-Decraene, L.-P.1    Smets, E.2
  • 52
    • 0032766857 scopus 로고    scopus 로고
    • Multiple comparisons of loglikelihoods with applications to phylogenetic inference
    • SHIMODAIRA, H., AND M. HASEGAWA. 1999. Multiple comparisons of loglikelihoods with applications to phylogenetic inference. Molecular Biology and Evolution 16: 1114-1116.
    • (1999) Molecular Biology and Evolution , vol.16 , pp. 1114-1116
    • Shimodaira, H.1    Hasegawa, M.2
  • 53
    • 0036095568 scopus 로고    scopus 로고
    • Retortamonad flagellates are closely related to diplomonads - Implications for the history of mitochondrial function in eukaryote evolution
    • SILBERMAN, J. D., A. G. B. SIMPSON, J. KULDA, I. CEPICKA, V. HAMPL, P. J. JOHNSON, AND A. J. ROGER. 2002. Retortamonad flagellates are closely related to diplomonads - implications for the history of mitochondrial function in eukaryote evolution. Molecular Biology and Evolution 19: 777-786.
    • (2002) Molecular Biology and Evolution , vol.19 , pp. 777-786
    • Silberman, J.D.1    Simpson, A.G.B.2    Kulda, J.3    Cepicka, I.4    Hampl, V.5    Johnson, P.J.6    Roger, A.J.7
  • 55
    • 0026261665 scopus 로고
    • Universal primers for the amplification of three non-coding regions of chloroplast DNA
    • TABERLET, P., L. GIELLY, G. PAUTOU. AND J. BOUVET. 1991. Universal primers for the amplification of three non-coding regions of chloroplast DNA. Plant Molecular Biology 17: 1105-1109.
    • (1991) Plant Molecular Biology , vol.17 , pp. 1105-1109
    • Taberlet, P.1    Gielly, L.2    Pautou, G.3    Bouvet, J.4
  • 56
    • 0042820681 scopus 로고
    • Cytotaxonomic observations on Mentzelia, sect. Bartonia (Loasaceae)
    • THOMPSON, H. J., 1963. Cytotaxonomic observations on Mentzelia, sect. Bartonia (Loasaceae). Madroño 17: 16-22.
    • (1963) Madroño , vol.17 , pp. 16-22
    • Thompson, H.J.1
  • 57
    • 0041818646 scopus 로고
    • Floral biology and systematics of Eucnide (Loasaceae)
    • THOMPSON, H. J., AND W. R. ERNST. 1967. Floral biology and systematics of Eucnide (Loasaceae). Journal of the Arnold Arboretum 48: 56-88.
    • (1967) Journal of the Arnold Arboretum , vol.48 , pp. 56-88
    • Thompson, H.J.1    Ernst, W.R.2
  • 58
    • 0001382444 scopus 로고
    • Chromosome numbers in Mentzelia (Loasaceae)
    • THOMPSON. H. J., AND H. LEWIS. 1955. Chromosome numbers in Mentzelia (Loasaceae). Madroño 13: 102-107.
    • (1955) Madroño , vol.13 , pp. 102-107
    • Thompson, H.J.1    Lewis, H.2
  • 59
    • 0036232908 scopus 로고    scopus 로고
    • Phylogenetic relationships among streptophytes as inferred from chloroplast small and large subunit rRNA gene sequences
    • TURMEL, M., M. EHARA, C. OTIS, AND C. LEMIEUX. 2002. Phylogenetic relationships among streptophytes as inferred from chloroplast small and large subunit rRNA gene sequences. Journal of Phycology 38: 364-375.
    • (2002) Journal of Phycology , vol.38 , pp. 364-375
    • Turmel, M.1    Ehara, M.2    Otis, C.3    Lemieux, C.4
  • 61
    • 0000123230 scopus 로고
    • Vegetation history of the deserts of southwestern North America; the nature and timing of the Late Wisconsin-Holocene transition
    • W. F. Ruddiman, and H. E. Wright. Jr. [eds.]. Geological Society of America, Boulder, Colorado, USA
    • VAN DEVENDER, T R., R. S. THOMPSON, AND J. L. BETANCOURT. 1987. Vegetation history of the deserts of southwestern North America; the nature and timing of the Late Wisconsin-Holocene transition. In W. F. Ruddiman, and H. E. Wright. Jr. [eds.], North America and adjacent oceans during the last glaciation, 323-352. Geological Society of America, Boulder, Colorado, USA.
    • (1987) North America and Adjacent Oceans during the Last Glaciation , pp. 323-352
    • Van Devender, T.R.1    Thompson, R.S.2    Betancourt, J.L.3
  • 63
    • 0042820680 scopus 로고    scopus 로고
    • Ph.D. dissertation, Ludwig-Maximilians-University, Munich, Germany
    • WEIGEND, M. 1997. Nasa and the conquest of South America. Ph.D. dissertation, Ludwig-Maximilians-University, Munich, Germany.
    • (1997) Nasa and the Conquest of South America
    • Weigend, M.1
  • 64
    • 0033837712 scopus 로고    scopus 로고
    • Phytochemistry and the systematics and ecology of Loasaceae and Gronoviaceae (Loasales)
    • WEIGEND, M., J. KUFER, AND A. A. MÜLLER. 2000. Phytochemistry and the systematics and ecology of Loasaceae and Gronoviaceae (Loasales). American Journal of Botany 87: 1202-1210.
    • (2000) American Journal of Botany , vol.87 , pp. 1202-1210
    • Weigend, M.1    Kufer, J.2    Müller, A.A.3
  • 65
    • 0036375819 scopus 로고    scopus 로고
    • Relationships within Cornales and circumscriptions of Cornaceae - matK and rbcL sequence data and effects of outgroups and long branches
    • XIANG, Q.-Y., M. L. MOODY, D. E. SOLTIS, C.-Z. FAN, AND P. S. SOLTIS. 2002. Relationships within Cornales and circumscriptions of Cornaceae - matK and rbcL sequence data and effects of outgroups and long branches. Molecular Phylogenetics and Evolution 24: 35-57.
    • (2002) Molecular Phylogenetics and Evolution , vol.24 , pp. 35-57
    • Xiang, Q.-Y.1    Moody, M.L.2    Soltis, D.E.3    Fan, C.-Z.4    Soltis, P.S.5
  • 66
    • 0001336098 scopus 로고
    • Phylogenetic relationships of Cornus sensu lato and putative relatives inferred from rbcL sequence data
    • XIANG, Q.-Y., D. E. SOLTIS, D. R. MORGAN, AND P. S. SOLTIS. 1993. Phylogenetic relationships of Cornus sensu lato and putative relatives inferred from rbcL sequence data. Annals of the Missouri Botanical Garden 80: 723-734.
    • (1993) Annals of the Missouri Botanical Garden , vol.80 , pp. 723-734
    • Xiang, Q.-Y.1    Soltis, D.E.2    Morgan, D.R.3    Soltis, P.S.4
  • 67
    • 0032228898 scopus 로고    scopus 로고
    • Phylogenetic relationships of Cornaceae and close relatives inferred form matK and rbcL sequences
    • XIANG, Q.-Y., D. E. SOLTIS, AND P. S. SOLTIS. 1998. Phylogenetic relationships of Cornaceae and close relatives inferred form matK and rbcL sequences. American Journal of Botany 85: 285-297.
    • (1998) American Journal of Botany , vol.85 , pp. 285-297
    • Xiang, Q.-Y.1    Soltis, D.E.2    Soltis, P.S.3


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