-
1
-
-
34548746885
-
SIMPLE estimate of the free energy change due to aliphatic mutations: superior predictions based on first principles
-
Bueno M, Camacho CJ, Sancho J. SIMPLE estimate of the free energy change due to aliphatic mutations: superior predictions based on first principles. Proteins 2007;68:850-862.
-
(2007)
Proteins
, vol.68
, pp. 850-862
-
-
Bueno, M.1
Camacho, C.J.2
Sancho, J.3
-
2
-
-
74549207309
-
Assessing computational methods for predicting protein stability upon mutation: good on average but not in the details
-
Potapov V, Cohen M, Schreiber G. Assessing computational methods for predicting protein stability upon mutation: good on average but not in the details. Protein Eng Des Sel 2009;22:553-560.
-
(2009)
Protein Eng Des Sel
, vol.22
, pp. 553-560
-
-
Potapov, V.1
Cohen, M.2
Schreiber, G.3
-
3
-
-
20544460658
-
Protein-DNA recognition patterns and predictions
-
Sarai A, Kono H. Protein-DNA recognition patterns and predictions. Annu Rev Biophys Biomol Struct 2005;34:379-398.
-
(2005)
Annu Rev Biophys Biomol Struct
, vol.34
, pp. 379-398
-
-
Sarai, A.1
Kono, H.2
-
4
-
-
33846894984
-
Energetics of the protein-DNA-water interaction
-
Spyrakis F, Cozzini P, Bertoli C, Marabotti A, Kellogg GE, Mozzarelli A. Energetics of the protein-DNA-water interaction. BMC Struct Biol 2007;7:4.
-
(2007)
BMC Struct Biol
, vol.7
, pp. 4
-
-
Spyrakis, F.1
Cozzini, P.2
Bertoli, C.3
Marabotti, A.4
Kellogg, G.E.5
Mozzarelli, A.6
-
5
-
-
67651173036
-
Experimentally based contact energies decode interactions responsible for protein-DNA affinity and the role of molecular waters at the binding interface
-
Temiz NA, Camacho CJ. Experimentally based contact energies decode interactions responsible for protein-DNA affinity and the role of molecular waters at the binding interface. Nucleic Acids Res 2009;37:4076-4088.
-
(2009)
Nucleic Acids Res
, vol.37
, pp. 4076-4088
-
-
Temiz, N.A.1
Camacho, C.J.2
-
6
-
-
33846424559
-
Water at biomolecular binding interfaces
-
Li Z, Lazaridis T. Water at biomolecular binding interfaces. Phys Chem Chem Phys 2007;9:573-581.
-
(2007)
Phys Chem Chem Phys
, vol.9
, pp. 573-581
-
-
Li, Z.1
Lazaridis, T.2
-
8
-
-
0035976713
-
Do water molecules mediate protein-DNA recognition?
-
Reddy CK, Das A, Jayaram B. Do water molecules mediate protein-DNA recognition? J Mol Biol 2001;314:619-632.
-
(2001)
J Mol Biol
, vol.314
, pp. 619-632
-
-
Reddy, C.K.1
Das, A.2
Jayaram, B.3
-
9
-
-
0031758857
-
Role of hydrogen bonds in protein-DNA recognition: a comparison of generalized born and finite difference Poisson-Boltzmann solvation treatments
-
Dixit SB, Jayaram B. Role of hydrogen bonds in protein-DNA recognition: a comparison of generalized born and finite difference Poisson-Boltzmann solvation treatments. J Biomol Struct Dyn 1998;16:237-242.
-
(1998)
J Biomol Struct Dyn
, vol.16
, pp. 237-242
-
-
Dixit, S.B.1
Jayaram, B.2
-
10
-
-
0037079572
-
Freeenergy component analysis of 40 protein-DNA complexes: a consensus view on the thermodynamics of binding at the molecular level
-
Jayaram B, McConnell K, Dixit SB, Das A, Beveridge DL. Freeenergy component analysis of 40 protein-DNA complexes: a consensus view on the thermodynamics of binding at the molecular level. J Comput Chem 2002;23:1-14.
-
(2002)
J Comput Chem
, vol.23
, pp. 1-14
-
-
Jayaram, B.1
McConnell, K.2
Dixit, S.B.3
Das, A.4
Beveridge, D.L.5
-
12
-
-
36749066579
-
Acidic groups docked to well defined wetted pockets at the core of the binding interface: a tale of scoring and missing protein interactions in CAPRI
-
Bueno M, Camacho CJ. Acidic groups docked to well defined wetted pockets at the core of the binding interface: a tale of scoring and missing protein interactions in CAPRI. Proteins 2007;69:786-792.
-
(2007)
Proteins
, vol.69
, pp. 786-792
-
-
Bueno, M.1
Camacho, C.J.2
-
13
-
-
0034141811
-
Continuum electrostatic analysis of preferred solvation sites around proteins in solution
-
Dennis S, Camacho CJ, Vajda S. Continuum electrostatic analysis of preferred solvation sites around proteins in solution. Proteins 2000;38:176-188.
-
(2000)
Proteins
, vol.38
, pp. 176-188
-
-
Dennis, S.1
Camacho, C.J.2
Vajda, S.3
-
14
-
-
0036291145
-
Predicting changes in the stability of proteins and protein complexes: a study of more than 1000 mutations
-
Guerois R, Nielsen JE, Serrano L. Predicting changes in the stability of proteins and protein complexes: a study of more than 1000 mutations. J Mol Biol 2002;320:369-387.
-
(2002)
J Mol Biol
, vol.320
, pp. 369-387
-
-
Guerois, R.1
Nielsen, J.E.2
Serrano, L.3
-
15
-
-
23144461249
-
I-Mutant2.0: predicting stability changes upon mutation from the protein sequence or structure
-
Capriotti E, Fariselli P, Casadio R. I-Mutant2.0: predicting stability changes upon mutation from the protein sequence or structure. Nucleic Acids Res 2005;33:W306-W310.
-
(2005)
Nucleic Acids Res
, vol.33
-
-
Capriotti, E.1
Fariselli, P.2
Casadio, R.3
-
16
-
-
70349847872
-
Fast and accurate predictions of protein stability changes upon mutations using statistical potentials and neural networks: PoPMu-SiC-2.0
-
Dehouck Y, Grosfils A, Folch B, Gilis D, Bogaerts P, Rooman M. Fast and accurate predictions of protein stability changes upon mutations using statistical potentials and neural networks: PoPMu-SiC-2.0. Bioinformatics 2009;25:2537-2543.
-
(2009)
Bioinformatics
, vol.25
, pp. 2537-2543
-
-
Dehouck, Y.1
Grosfils, A.2
Folch, B.3
Gilis, D.4
Bogaerts, P.5
Rooman, M.6
-
17
-
-
1842577654
-
Computational redesign of protein-protein interaction specificity
-
Kortemme T, Joachimiak LA, Bullock AN, Schuler AD, Stoddard BL, Baker D. Computational redesign of protein-protein interaction specificity. Nat Struct Mol Biol 2004;11:371-379.
-
(2004)
Nat Struct Mol Biol
, vol.11
, pp. 371-379
-
-
Kortemme, T.1
Joachimiak, L.A.2
Bullock, A.N.3
Schuler, A.D.4
Stoddard, B.L.5
Baker, D.6
-
18
-
-
14144256681
-
Energy functions for protein design: adjustment with protein-protein complex affinities, models for the unfolded state, and negative design of solubility and specificity
-
Pokala N, Handel TM. Energy functions for protein design: adjustment with protein-protein complex affinities, models for the unfolded state, and negative design of solubility and specificity. J Mol Biol 2005;347:203-227.
-
(2005)
J Mol Biol
, vol.347
, pp. 203-227
-
-
Pokala, N.1
Handel, T.M.2
-
19
-
-
34447323568
-
Structure-based redesign of the dimerization interface reduces the toxicity of zinc-finger nucleases
-
Szczepek M, Brondani V, Buchel J, Serrano L, Segal DJ, Cathomen T. Structure-based redesign of the dimerization interface reduces the toxicity of zinc-finger nucleases. Nat Biotechnol 2007;25:786-793.
-
(2007)
Nat Biotechnol
, vol.25
, pp. 786-793
-
-
Szczepek, M.1
Brondani, V.2
Buchel, J.3
Serrano, L.4
Segal, D.J.5
Cathomen, T.6
-
20
-
-
0035814880
-
Direct comparison of experimental and calculated folding free energies for hydrophobic deletion mutants of chymotrypsin inhibitor 2: free energy perturbation calculations using transition and denatured states from molecular dynamics simulations of unfolding
-
Pan Y, Daggett V. Direct comparison of experimental and calculated folding free energies for hydrophobic deletion mutants of chymotrypsin inhibitor 2: free energy perturbation calculations using transition and denatured states from molecular dynamics simulations of unfolding. Biochemistry 2001;40:2723-2731.
-
(2001)
Biochemistry
, vol.40
, pp. 2723-2731
-
-
Pan, Y.1
Daggett, V.2
-
21
-
-
11244318120
-
Computational protein design is a challenge for implicit solvation models
-
Jaramillo A, Wodak SJ. Computational protein design is a challenge for implicit solvation models. Biophys J 2005;88:156-171.
-
(2005)
Biophys J
, vol.88
, pp. 156-171
-
-
Jaramillo, A.1
Wodak, S.J.2
-
22
-
-
0042868638
-
Role of water mediated interactions in protein-protein recognition landscapes
-
Papoian GA, Ulander J, Wolynes PG. Role of water mediated interactions in protein-protein recognition landscapes. J Am Chem Soc 2003;125:9170-9178.
-
(2003)
J Am Chem Soc
, vol.125
, pp. 9170-9178
-
-
Papoian, G.A.1
Ulander, J.2
Wolynes, P.G.3
-
23
-
-
38349152721
-
On the contribution of water-mediated interactions to protein-complex stability
-
Reichmann D, Phillip Y, Carmi A, Schreiber G. On the contribution of water-mediated interactions to protein-complex stability. Biochemistry 2008;47:1051-1060.
-
(2008)
Biochemistry
, vol.47
, pp. 1051-1060
-
-
Reichmann, D.1
Phillip, Y.2
Carmi, A.3
Schreiber, G.4
-
24
-
-
0028274954
-
Intramolecular cavities in globular proteins
-
Hubbard SJ, Gross KH, Argos P. Intramolecular cavities in globular proteins. Protein Eng 1994;7:613-626.
-
(1994)
Protein Eng
, vol.7
, pp. 613-626
-
-
Hubbard, S.J.1
Gross, K.H.2
Argos, P.3
-
25
-
-
0028095182
-
Buried waters and internal cavities in monomeric proteins
-
Williams MA, Goodfellow JM, Thornton JM. Buried waters and internal cavities in monomeric proteins. Protein Sci 1994;3:1224-1235.
-
(1994)
Protein Sci
, vol.3
, pp. 1224-1235
-
-
Williams, M.A.1
Goodfellow, J.M.2
Thornton, J.M.3
-
26
-
-
0033524454
-
Disordered water within a hydrophobic protein cavity visualized by x-ray crystallography
-
Yu B, Blaber M, Gronenborn AM, Clore GM, Caspar DL. Disordered water within a hydrophobic protein cavity visualized by x-ray crystallography. Proc Natl Acad Sci USA 1999;96:103-108.
-
(1999)
Proc Natl Acad Sci USA
, vol.96
, pp. 103-108
-
-
Yu, B.1
Blaber, M.2
Gronenborn, A.M.3
Clore, G.M.4
Caspar, D.L.5
-
27
-
-
61449156398
-
A review about nothing: are apolar cavities in proteins really empty?
-
Matthews BW, Liu L. A review about nothing: are apolar cavities in proteins really empty? Protein Sci 2009;18:494-502.
-
(2009)
Protein Sci
, vol.18
, pp. 494-502
-
-
Matthews, B.W.1
Liu, L.2
-
28
-
-
0029882171
-
Structural and energetic responses to cavity-creating mutations in hydrophobic cores: observation of a buried water molecule and the hydrophilic nature of such hydrophobic cavities
-
Buckle AM, Cramer P, Fersht AR. Structural and energetic responses to cavity-creating mutations in hydrophobic cores: observation of a buried water molecule and the hydrophilic nature of such hydrophobic cavities. Biochemistry 1996;35:4298-4305.
-
(1996)
Biochemistry
, vol.35
, pp. 4298-4305
-
-
Buckle, A.M.1
Cramer, P.2
Fersht, A.R.3
-
30
-
-
33847308554
-
Structural rigidity of a large cavity-containing protein revealed by high-pressure crystallography
-
Collins MD, Quillin ML, Hummer G, Matthews BW, Gruner SM. Structural rigidity of a large cavity-containing protein revealed by high-pressure crystallography. J Mol Biol 2007;367:752-763.
-
(2007)
J Mol Biol
, vol.367
, pp. 752-763
-
-
Collins, M.D.1
Quillin, M.L.2
Hummer, G.3
Matthews, B.W.4
Gruner, S.M.5
-
31
-
-
0026509036
-
A cavity-containing mutant of T4 lysozyme is stabilized by buried benzene
-
Eriksson AE, Baase WA, Wozniak JA, Matthews BW. A cavity-containing mutant of T4 lysozyme is stabilized by buried benzene. Nature 1992;355:371-373.
-
(1992)
Nature
, vol.355
, pp. 371-373
-
-
Eriksson, A.E.1
Baase, W.A.2
Wozniak, J.A.3
Matthews, B.W.4
-
32
-
-
0034106349
-
Theoretical studies of the response of a protein structure to cavity-creating mutations
-
Lee J, Lee K, Shin S. Theoretical studies of the response of a protein structure to cavity-creating mutations. Biophys J 2000;78:1665-1671.
-
(2000)
Biophys J
, vol.78
, pp. 1665-1671
-
-
Lee, J.1
Lee, K.2
Shin, S.3
-
33
-
-
70349135928
-
Use of stabilizing mutations to engineer a charged group within a ligand-binding hydrophobic cavity in T4 lysozyme
-
Liu L, Baase WA, Michael MM, Matthews BW. Use of stabilizing mutations to engineer a charged group within a ligand-binding hydrophobic cavity in T4 lysozyme. Biochemistry 2009;48:8842-8851.
-
(2009)
Biochemistry
, vol.48
, pp. 8842-8851
-
-
Liu, L.1
Baase, W.A.2
Michael, M.M.3
Matthews, B.W.4
-
34
-
-
60749109507
-
Organic ligand binding by a hydrophobic cavity in a designed tetrameric coiled-coil protein
-
Mizuno T, Hasegawa C, Tanabe Y, Hamajima K, Muto T, Nishi Y, Oda M, Kobayashi Y, Tanaka T. Organic ligand binding by a hydrophobic cavity in a designed tetrameric coiled-coil protein. Chemistry 2009;15:1491-1498.
-
(2009)
Chemistry
, vol.15
, pp. 1491-1498
-
-
Mizuno, T.1
Hasegawa, C.2
Tanabe, Y.3
Hamajima, K.4
Muto, T.5
Nishi, Y.6
Oda, M.7
Kobayashi, Y.8
Tanaka, T.9
-
35
-
-
12344321689
-
Structural and energetic consequences of mutations in a solvated hydrophobic cavity
-
Adamek DH, Guerrero L, Blaber M, Caspar DL. Structural and energetic consequences of mutations in a solvated hydrophobic cavity. J Mol Biol 2005;346:307-318.
-
(2005)
J Mol Biol
, vol.346
, pp. 307-318
-
-
Adamek, D.H.1
Guerrero, L.2
Blaber, M.3
Caspar, D.L.4
-
36
-
-
0030038545
-
Direct observation of protein solvation and discrete disorder with experimental crystallographic phases
-
Burling FT, Weis WI, Flaherty KM, Brunger AT. Direct observation of protein solvation and discrete disorder with experimental crystallographic phases. Science 1996;271:72-77.
-
(1996)
Science
, vol.271
, pp. 72-77
-
-
Burling, F.T.1
Weis, W.I.2
Flaherty, K.M.3
Brunger, A.T.4
-
37
-
-
55749086402
-
Use of experimental crystallographic phases to examine the hydration of polar and nonpolar cavities in T4 lysozyme
-
Liu L, Quillin ML, Matthews BW. Use of experimental crystallographic phases to examine the hydration of polar and nonpolar cavities in T4 lysozyme. Proc Natl Acad Sci USA 2008;105:14406-14411.
-
(2008)
Proc Natl Acad Sci USA
, vol.105
, pp. 14406-14411
-
-
Liu, L.1
Quillin, M.L.2
Matthews, B.W.3
-
38
-
-
52949132638
-
Cavities and atomic packing in protein structures and interfaces
-
Sonavane S, Chakrabarti P. Cavities and atomic packing in protein structures and interfaces. PLoS Comput Biol 2008;4:e1000188.
-
(2008)
PLoS Comput Biol
, vol.4
-
-
Sonavane, S.1
Chakrabarti, P.2
-
39
-
-
69049101233
-
Cavities in protein-DNA and protein-RNA interfaces
-
Sonavane S, Chakrabarti P. Cavities in protein-DNA and protein-RNA interfaces. Nucleic Acids Res 2009;37:4613-4620.
-
(2009)
Nucleic Acids Res
, vol.37
, pp. 4613-4620
-
-
Sonavane, S.1
Chakrabarti, P.2
-
40
-
-
0037246110
-
Buried water molecules contribute to the conformational stability of a protein
-
Takano K, Yamagata Y, Yutani K. Buried water molecules contribute to the conformational stability of a protein. Protein Eng 2003;16:5-9.
-
(2003)
Protein Eng
, vol.16
, pp. 5-9
-
-
Takano, K.1
Yamagata, Y.2
Yutani, K.3
-
41
-
-
52649130704
-
Protein-protein interaction and quaternary structure
-
Janin J, Bahadur RP, Chakrabarti P. Protein-protein interaction and quaternary structure. Q Rev Biophys 2008;41:133-180.
-
(2008)
Q Rev Biophys
, vol.41
, pp. 133-180
-
-
Janin, J.1
Bahadur, R.P.2
Chakrabarti, P.3
-
42
-
-
77949526604
-
Optimization of minimum set of protein-DNA interactions: a quasi exact solution with minimum over-fitting
-
Temiz NA, Trapp A, Prokopyev OA, Camacho CJ. Optimization of minimum set of protein-DNA interactions: a quasi exact solution with minimum over-fitting. Bioinformatics 2010;26:319-325.
-
(2010)
Bioinformatics
, vol.26
, pp. 319-325
-
-
Temiz, N.A.1
Trapp, A.2
Prokopyev, O.A.3
Camacho, C.J.4
-
43
-
-
37549067728
-
Structure of the yeast tRNA m7G methylation complex
-
Leulliot N, Chaillet M, Durand D, Ulryck N, Blondeau K, van TH. Structure of the yeast tRNA m7G methylation complex. Structure 2008;16:52-61.
-
(2008)
Structure
, vol.16
, pp. 52-61
-
-
Leulliot, N.1
Chaillet, M.2
Durand, D.3
Ulryck, N.4
Blondeau, K.5
van, T.H.6
-
44
-
-
45649084937
-
Structural and mutational analyses of the interaction between the barley alpha-amylase/subtilisin inhibitor and the subtilisin savinase reveal a novel mode of inhibition
-
Micheelsen PO, Vevodova J, De ML, Ostergaard PR, Friis EP, Wilson K, Skjot M. Structural and mutational analyses of the interaction between the barley alpha-amylase/subtilisin inhibitor and the subtilisin savinase reveal a novel mode of inhibition. J Mol Biol 2008;380:681-690.
-
(2008)
J Mol Biol
, vol.380
, pp. 681-690
-
-
Micheelsen, P.O.1
Vevodova, J.2
De, M.L.3
Ostergaard, P.R.4
Friis, E.P.5
Wilson, K.6
Skjot, M.7
-
45
-
-
70349205397
-
The structural basis of Arf effector specificity: the crystal structure of ARF6 in a complex with JIP4
-
Isabet T, Montagnac G, Regazzoni K, Raynal B, El KF, England P, Franco M, Chavrier P, Houdusse A, Menetrey J. The structural basis of Arf effector specificity: the crystal structure of ARF6 in a complex with JIP4. EMBO J 2009;28:2835-2845.
-
(2009)
EMBO J
, vol.28
, pp. 2835-2845
-
-
Isabet, T.1
Montagnac, G.2
Regazzoni, K.3
Raynal, B.4
El, K.F.5
England, P.6
Franco, M.7
Chavrier, P.8
Houdusse, A.9
Menetrey, J.10
-
46
-
-
70350355110
-
The ternary structure of the double-headed arrowhead protease inhibitor API-A complexed with two trypsins reveals a novel reactive site conformation
-
Bao R, Zhou CZ, Jiang C, Lin SX, Chi CW, Chen Y. The ternary structure of the double-headed arrowhead protease inhibitor API-A complexed with two trypsins reveals a novel reactive site conformation. J Biol Chem 2009;284:26676-26684.
-
(2009)
J Biol Chem
, vol.284
, pp. 26676-26684
-
-
Bao, R.1
Zhou, C.Z.2
Jiang, C.3
Lin, S.X.4
Chi, C.W.5
Chen, Y.6
-
47
-
-
37549021146
-
Binding of Rac1, Rnd1, and RhoD to a novel Rho GTPase interaction motif destabilizes dimerization of the plexin-B1 effector domain
-
Tong Y, Chugha P, Hota PK, Alviani RS, Li M, Tempel W, Shen L, Park HW, Buck M. Binding of Rac1, Rnd1, and RhoD to a novel Rho GTPase interaction motif destabilizes dimerization of the plexin-B1 effector domain J Biol Chem 2007;282:37215-37224.
-
(2007)
J Biol Chem
, vol.282
, pp. 37215-37224
-
-
Tong, Y.1
Chugha, P.2
Hota, P.K.3
Alviani, R.S.4
Li, M.5
Tempel, W.6
Shen, L.7
Park, H.W.8
Buck, M.9
-
48
-
-
38949143024
-
Insights into oncogenic mutations of plexin-B1 based on the solution structure of the Rho GTPase binding domain
-
Tong Y, Hota PK, Hamaneh MB, Buck M. Insights into oncogenic mutations of plexin-B1 based on the solution structure of the Rho GTPase binding domain. Structure 2008;16:246-258.
-
(2008)
Structure
, vol.16
, pp. 246-258
-
-
Tong, Y.1
Hota, P.K.2
Hamaneh, M.B.3
Buck, M.4
-
49
-
-
77953593958
-
Self-association of TPR domains: lessons learned from a designed, consensus-based TPR oligomer
-
Krachler AM, Sharma A, Kleanthous C. Self-association of TPR domains: lessons learned from a designed, consensus-based TPR oligomer. Proteins 2010;78:2131-2143.
-
(2010)
Proteins
, vol.78
, pp. 2131-2143
-
-
Krachler, A.M.1
Sharma, A.2
Kleanthous, C.3
-
50
-
-
0032522662
-
High-resolution structures of variant Zif268-DNA complexes: implications for understanding zinc finger-DNA recognition
-
Elrod-Erickson M, Benson TE, Pabo CO. High-resolution structures of variant Zif268-DNA complexes: implications for understanding zinc finger-DNA recognition. Structure 1998;6:451-464.
-
(1998)
Structure
, vol.6
, pp. 451-464
-
-
Elrod-Erickson, M.1
Benson, T.E.2
Pabo, C.O.3
-
51
-
-
0030587774
-
Zif268 protein-DNA complex refined at 1.6Å: a model system for understanding zinc finger-DNA interactions
-
Elrod-Erickson M, Rould MA, Nekludova L, Pabo CO. Zif268 protein-DNA complex refined at 1.6Å: a model system for understanding zinc finger-DNA interactions. Structure 1996;4:1171-1180.
-
(1996)
Structure
, vol.4
, pp. 1171-1180
-
-
Elrod-Erickson, M.1
Rould, M.A.2
Nekludova, L.3
Pabo, C.O.4
-
52
-
-
25444480735
-
Quantitative analysis of EGR proteins binding to DNA: assessing additivity in both the binding site and the protein
-
Liu J, Stormo GD. Quantitative analysis of EGR proteins binding to DNA: assessing additivity in both the binding site and the protein. BMC Bioinformat 2005;6:176.
-
(2005)
BMC Bioinformat
, vol.6
, pp. 176
-
-
Liu, J.1
Stormo, G.D.2
-
53
-
-
0034925093
-
Computational analysis of binding of P1 variants to trypsin
-
Brandsdal BO, Aqvist J, Smalas AO. Computational analysis of binding of P1 variants to trypsin. Protein Sci 2001;10:1584-1595.
-
(2001)
Protein Sci
, vol.10
, pp. 1584-1595
-
-
Brandsdal, B.O.1
Aqvist, J.2
Smalas, A.O.3
-
54
-
-
33646817694
-
Scoring a diverse set of high-quality docked conformations: a metascore based on electrostatic and desolvation interactions
-
Camacho CJ, Ma H, Champ PC. Scoring a diverse set of high-quality docked conformations: a metascore based on electrostatic and desolvation interactions. Proteins 2006;63:868-877.
-
(2006)
Proteins
, vol.63
, pp. 868-877
-
-
Camacho, C.J.1
Ma, H.2
Champ, P.C.3
-
55
-
-
34547572513
-
FastContact: a free energy scoring tool for protein-protein complex structures
-
Champ PC, Camacho CJ. FastContact: a free energy scoring tool for protein-protein complex structures. Nucleic Acids Res 2007; 35:W556-W560.
-
(2007)
Nucleic Acids Res
, vol.35
-
-
Champ, P.C.1
Camacho, C.J.2
|