Acidic groups docked to well defined wetted pockets at the core of the binding interface: A tale of scoring and missing protein interactions in CAPRI

Proteins: Structure, Function and Genetics

Volumn 69, Issue 4, 2007, Pages 786-792

  Bueno, Marta ^a   Camacho, Carlos J ^a  

^a UNIVERSITY OF PITTSBURGH SCHOOL OF MEDICINE   (United States)

Author keywords

Energy prediction; Hydrogen bonds; Protein docking; Protein folding; Protein interactions; Salt bridges; Scoring function

Indexed keywords

ASPARTIC ACID; GLUTAMIC ACID; WATER;

BINDING AFFINITY; CONFERENCE PAPER; HYDROGEN BOND; MOLECULAR INTERACTION; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN BINDING; PROTEIN FUNCTION; PROTEIN INTERACTION; PROTEIN STRUCTURE; PROTEIN TARGETING;

ALGORITHMS; COMPUTATIONAL BIOLOGY; COMPUTER SIMULATION; CRYSTALLIZATION; DATABASES, PROTEIN; HEME; MODELS, MOLECULAR; MOLECULAR CONFORMATION; PROTEIN BINDING; PROTEIN CONFORMATION; PROTEIN INTERACTION MAPPING; PROTEINS; PROTEOMICS; SOFTWARE; SOLVENTS; WATER;

EID: 36749066579     PISSN: 08873585     EISSN: 10970134     Source Type: Journal    
DOI: 10.1002/prot.21722     Document Type: Conference Paper

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