메뉴 건너뛰기




Volumn 49, Issue 35, 2010, Pages 7474-7484

High-resolution MAS NMR analysis of PI3-SH3 amyloid fibrils: Backbone conformation and implications for protofilament assembly and structure

Author keywords

[No Author keywords available]

Indexed keywords

CHEMICAL ELEMENTS; CONFORMATIONS; GLYCOPROTEINS; NUCLEAR MAGNETIC RESONANCE; NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY; POLYPEPTIDES; RESONANCE; SPIN DYNAMICS; STRUCTURAL ANALYSIS;

EID: 77956158248     PISSN: 00062960     EISSN: 15204995     Source Type: Journal    
DOI: 10.1021/bi100864t     Document Type: Article
Times cited : (51)

References (97)
  • 1
    • 33746377894 scopus 로고    scopus 로고
    • Protein misfolding, functional amyloid, and human disease
    • Chiti, F. and Dobson, C. M. (2006) Protein misfolding, functional amyloid, and human disease Annu. Rev. Biochem. 75, 333-366
    • (2006) Annu. Rev. Biochem. , vol.75 , pp. 333-366
    • Chiti, F.1    Dobson, C.M.2
  • 3
    • 0031825554 scopus 로고    scopus 로고
    • From the globular to the fibrous state: Protein structure and structural conversion in amyloid formation
    • Sunde, M. and Blake, C. C. (1998) From the globular to the fibrous state: Protein structure and structural conversion in amyloid formation Q. Rev. Biophys. 31, 1-39
    • (1998) Q. Rev. Biophys. , vol.31 , pp. 1-39
    • Sunde, M.1    Blake, C.C.2
  • 4
    • 57749098600 scopus 로고    scopus 로고
    • Amyloid formation by globular proteins under native conditions
    • Chiti, F. and Dobson, C. M. (2009) Amyloid formation by globular proteins under native conditions Nat. Chem. Biol. 5, 15-22
    • (2009) Nat. Chem. Biol. , vol.5 , pp. 15-22
    • Chiti, F.1    Dobson, C.M.2
  • 5
    • 0036527699 scopus 로고    scopus 로고
    • Therapeutic Strategies for Human Amyloid Diseases
    • Sacchettini, J. C. and Kelly, J. W. (2002) Therapeutic Strategies for Human Amyloid Diseases Nat. Rev. Drug Discovery 1, 267-275
    • (2002) Nat. Rev. Drug Discovery , vol.1 , pp. 267-275
    • Sacchettini, J.C.1    Kelly, J.W.2
  • 6
    • 0347357617 scopus 로고    scopus 로고
    • Protein folding and misfolding
    • Dobson, C. M. (2003) Protein folding and misfolding Nature 426, 884-890
    • (2003) Nature , vol.426 , pp. 884-890
    • Dobson, C.M.1
  • 7
    • 0348077417 scopus 로고    scopus 로고
    • A neuronal isoform of the aplysia CPEB has prion-like properties
    • Si, K., Lindquist, S., and Kandel, E. R. (2003) A neuronal isoform of the aplysia CPEB has prion-like properties Cell 115, 879-891
    • (2003) Cell , vol.115 , pp. 879-891
    • Si, K.1    Lindquist, S.2    Kandel, E.R.3
  • 8
    • 0030885650 scopus 로고    scopus 로고
    • The protein product of the het-s heterokaryon incompatibility gene of the fungus Podospora anserina behaves as a prion analog
    • Coustou, V., Deleu, C., Saupe, S., and Begueret, J. (1997) The protein product of the het-s heterokaryon incompatibility gene of the fungus Podospora anserina behaves as a prion analog Proc. Natl. Acad. Sci. U.S.A. 94, 9773-9778
    • (1997) Proc. Natl. Acad. Sci. U.S.A. , vol.94 , pp. 9773-9778
    • Coustou, V.1    Deleu, C.2    Saupe, S.3    Begueret, J.4
  • 10
    • 0037986392 scopus 로고    scopus 로고
    • Proprotein convertase cleavage liberates a fibrillogenic fragment of a resident glycoprotein to initiate melanosome biogenesis
    • Berson, J. F., Theos, A. C., Harper, D. C., Tenza, D., Raposo, G., and Marks, M. S. (2003) Proprotein convertase cleavage liberates a fibrillogenic fragment of a resident glycoprotein to initiate melanosome biogenesis J. Cell Biol. 161, 521-533
    • (2003) J. Cell Biol. , vol.161 , pp. 521-533
    • Berson, J.F.1    Theos, A.C.2    Harper, D.C.3    Tenza, D.4    Raposo, G.5    Marks, M.S.6
  • 12
    • 2342569618 scopus 로고    scopus 로고
    • Conformational constraints for amyloid fibrillation: The importance of being unfolded
    • Uversky, V. N. and Fink, A. L. (2004) Conformational constraints for amyloid fibrillation: The importance of being unfolded Biochim. Biophys. Acta 1698, 131-153
    • (2004) Biochim. Biophys. Acta , vol.1698 , pp. 131-153
    • Uversky, V.N.1    Fink, A.L.2
  • 14
    • 0029980671 scopus 로고    scopus 로고
    • Crystal structure of PI3K SH3 domain at 2.0 angstroms resolution
    • Liang, J., Chen, J. K., Schreiber, S. T., and Clardy, J. (1996) Crystal structure of PI3K SH3 domain at 2.0 angstroms resolution J. Mol. Biol. 257, 632-643
    • (1996) J. Mol. Biol. , vol.257 , pp. 632-643
    • Liang, J.1    Chen, J.K.2    Schreiber, S.T.3    Clardy, J.4
  • 15
    • 0027191192 scopus 로고
    • Solution structure and ligand-binding site of the SH3 domain of the p85 α subunit of phosphatidylinositol 3-kinase
    • Booker, G. W., Gout, I., Downing, A. K., Driscoll, P. C., Boyd, J., Waterfield, M. D., and Campbell, I. D. (1993) Solution structure and ligand-binding site of the SH3 domain of the p85 α subunit of phosphatidylinositol 3-kinase Cell 73, 813-822
    • (1993) Cell , vol.73 , pp. 813-822
    • Booker, G.W.1    Gout, I.2    Downing, A.K.3    Driscoll, P.C.4    Boyd, J.5    Waterfield, M.D.6    Campbell, I.D.7
  • 19
    • 0034834580 scopus 로고    scopus 로고
    • Preparation and characterization of purified amyloid fibrils
    • Zurdo, J., Guijarro, J. I., and Dobson, C. M. (2001) Preparation and characterization of purified amyloid fibrils J. Am. Chem. Soc. 123, 8141-8142
    • (2001) J. Am. Chem. Soc. , vol.123 , pp. 8141-8142
    • Zurdo, J.1    Guijarro, J.I.2    Dobson, C.M.3
  • 20
    • 0042847751 scopus 로고    scopus 로고
    • Cryo-electron microscopy structure of an SH3 amyloid fibril and model of the molecular packing
    • Jimenez, J., Guijarro, J., Orlova, E., Zurdo, J., Dobson, C., Sunde, M., and Saibil, H. (1999) Cryo-electron microscopy structure of an SH3 amyloid fibril and model of the molecular packing EMBO J. 18, 815-821
    • (1999) EMBO J. , vol.18 , pp. 815-821
    • Jimenez, J.1    Guijarro, J.2    Orlova, E.3    Zurdo, J.4    Dobson, C.5    Sunde, M.6    Saibil, H.7
  • 21
    • 0035839035 scopus 로고    scopus 로고
    • Dependence on solution conditions of aggregation and amyloid formation by an SH3 domain
    • Zurdo, J., Guijarro, J. I., Jimenez, J. L., Saibil, H. R., and Dobson, C. M. (2001) Dependence on solution conditions of aggregation and amyloid formation by an SH3 domain J. Mol. Biol. 311, 325-340
    • (2001) J. Mol. Biol. , vol.311 , pp. 325-340
    • Zurdo, J.1    Guijarro, J.I.2    Jimenez, J.L.3    Saibil, H.R.4    Dobson, C.M.5
  • 26
    • 0031444010 scopus 로고    scopus 로고
    • Atomic force microscopic imaging of seeded fibril formation and fibril branching by the Alzheimer's disease amyloid-β protein
    • Harper, J. D., Lieber, C. M., and Lansbury, P. T., Jr. (1997) Atomic force microscopic imaging of seeded fibril formation and fibril branching by the Alzheimer's disease amyloid-β protein Chem. Biol. 4, 951-959
    • (1997) Chem. Biol. , vol.4 , pp. 951-959
    • Harper, J.D.1    Lieber, C.M.2    Lansbury, Jr.P.T.3
  • 28
    • 0037038365 scopus 로고    scopus 로고
    • Structure of a protein determined by solid-state magic-angle-spinning NMR spectroscopy
    • Castellani, F., van Rossum, B., Diehl, A., Schubert, M., Rehbein, K., and Oschkinat, H. (2002) Structure of a protein determined by solid-state magic-angle-spinning NMR spectroscopy Nature 420, 98-102
    • (2002) Nature , vol.420 , pp. 98-102
    • Castellani, F.1    Van Rossum, B.2    Diehl, A.3    Schubert, M.4    Rehbein, K.5    Oschkinat, H.6
  • 29
    • 20944434430 scopus 로고    scopus 로고
    • Protein structure determination by high-resolution solid-state NMR spectroscopy: Application to microcrystalline ubiquitin
    • Zech, S. G., Wand, A. J., and McDermott, A. E. (2005) Protein structure determination by high-resolution solid-state NMR spectroscopy: Application to microcrystalline ubiquitin J. Am. Chem. Soc. 127, 8618-8626
    • (2005) J. Am. Chem. Soc. , vol.127 , pp. 8618-8626
    • Zech, S.G.1    Wand, A.J.2    McDermott, A.E.3
  • 32
    • 1642433249 scopus 로고    scopus 로고
    • High-resolution molecular structure of a peptide in an amyloid fibril determined by magic angle spinning NMR spectroscopy
    • Jaroniec, C. P., MacPhee, C. E., Bajaj, V. S., McMahon, M. T., Dobson, C. M., and Griffin, R. G. (2004) High-resolution molecular structure of a peptide in an amyloid fibril determined by magic angle spinning NMR spectroscopy Proc. Natl. Acad. Sci. U.S.A. 101, 711-716
    • (2004) Proc. Natl. Acad. Sci. U.S.A. , vol.101 , pp. 711-716
    • Jaroniec, C.P.1    MacPhee, C.E.2    Bajaj, V.S.3    McMahon, M.T.4    Dobson, C.M.5    Griffin, R.G.6
  • 33
    • 27644518721 scopus 로고    scopus 로고
    • Molecular-level secondary structure, polymorphism, and dynamics of full-length α-synuclein fibrils studied by solid-state NMR
    • Heise, H., Hoyer, W., Becker, S., Andronesi, O. C., Riedel, D., and Baldus, M. (2005) Molecular-level secondary structure, polymorphism, and dynamics of full-length α-synuclein fibrils studied by solid-state NMR Proc. Natl. Acad. Sci. U.S.A. 102, 15871-15876
    • (2005) Proc. Natl. Acad. Sci. U.S.A. , vol.102 , pp. 15871-15876
    • Heise, H.1    Hoyer, W.2    Becker, S.3    Andronesi, O.C.4    Riedel, D.5    Baldus, M.6
  • 34
    • 0034649352 scopus 로고    scopus 로고
    • Amyloid fibril formation by Aβ16-22, a seven-residue fragment of the Alzheimer's β-amyloid peptide, and structural characterization by solid state NMR
    • Balbach, J. J., Ishii, Y., Antzutkin, O. N., Leapman, R. D., Rizzo, N. W., Dyda, F., Reed, J., and Tycko, R. (2000) Amyloid fibril formation by Aβ16-22, a seven-residue fragment of the Alzheimer's β-amyloid peptide, and structural characterization by solid state NMR Biochemistry 39, 13748-13759
    • (2000) Biochemistry , vol.39 , pp. 13748-13759
    • Balbach, J.J.1    Ishii, Y.2    Antzutkin, O.N.3    Leapman, R.D.4    Rizzo, N.W.5    Dyda, F.6    Reed, J.7    Tycko, R.8
  • 35
    • 0037168446 scopus 로고    scopus 로고
    • Supramolecular structural constraints on Alzheimer's β-amyloid fibrils from electron microscopy and solid-state nuclear magnetic resonance
    • Antzutkin, O. N., Leapman, R. D., Balbach, J. J., and Tycko, R. (2002) Supramolecular structural constraints on Alzheimer's β-amyloid fibrils from electron microscopy and solid-state nuclear magnetic resonance Biochemistry 41, 15436-15450
    • (2002) Biochemistry , vol.41 , pp. 15436-15450
    • Antzutkin, O.N.1    Leapman, R.D.2    Balbach, J.J.3    Tycko, R.4
  • 36
    • 12244249201 scopus 로고    scopus 로고
    • Self-propagating, molecular-level polymorphism in Alzheimer's β-amyloid fibrils
    • Petkova, A. T., Leapman, R. D., Guo, Z., Yau, W. M., Mattson, M. P., and Tycko, R. (2005) Self-propagating, molecular-level polymorphism in Alzheimer's β-amyloid fibrils Science 307, 262-265
    • (2005) Science , vol.307 , pp. 262-265
    • Petkova, A.T.1    Leapman, R.D.2    Guo, Z.3    Yau, W.M.4    Mattson, M.P.5    Tycko, R.6
  • 37
    • 33744831968 scopus 로고    scopus 로고
    • Polymorphic fibril formation by residues 10-40 of the Alzheimer's β-amyloid peptide
    • Paravastu, A. K., Petkova, A. T., and Tycko, R. (2006) Polymorphic fibril formation by residues 10-40 of the Alzheimer's β-amyloid peptide Biophys. J. 90, 4618-4629
    • (2006) Biophys. J. , vol.90 , pp. 4618-4629
    • Paravastu, A.K.1    Petkova, A.T.2    Tycko, R.3
  • 38
    • 30744433878 scopus 로고    scopus 로고
    • Experimental constraints on quaternary structure in Alzheimer's β-amyloid fibrils
    • Petkova, A. T., Yau, W. M., and Tycko, R. (2006) Experimental constraints on quaternary structure in Alzheimer's β-amyloid fibrils Biochemistry 45, 498-512
    • (2006) Biochemistry , vol.45 , pp. 498-512
    • Petkova, A.T.1    Yau, W.M.2    Tycko, R.3
  • 39
    • 34247504580 scopus 로고    scopus 로고
    • Solid-State NMR Study of Amyloid Nanocrystals and Fibrils Formed by the Peptide GNNQQNY from Yeast Prion Protein Sup35p
    • van der Wel, P. C. A., Lewandowski, J. R., and Griffin, R. G. (2007) Solid-State NMR Study of Amyloid Nanocrystals and Fibrils Formed by the Peptide GNNQQNY from Yeast Prion Protein Sup35p J. Am. Chem. Soc. 129, 5117-5130
    • (2007) J. Am. Chem. Soc. , vol.129 , pp. 5117-5130
    • Van Der Wel, P.C.A.1    Lewandowski, J.R.2    Griffin, R.G.3
  • 40
    • 77955045091 scopus 로고    scopus 로고
    • Magic angle spinning NMR analysis of β2-microglobulin amyloid fibrils in two distinct morphologies
    • Debelouchina, G. T., Platt, G. W., Bayro, M. J., Radford, S. E., and Griffin, R. G. (2010) Magic angle spinning NMR analysis of β2-microglobulin amyloid fibrils in two distinct morphologies J. Am. Chem. Soc. 132, 10414-10423
    • (2010) J. Am. Chem. Soc. , vol.132 , pp. 10414-10423
    • Debelouchina, G.T.1    Platt, G.W.2    Bayro, M.J.3    Radford, S.E.4    Griffin, R.G.5
  • 41
    • 18044391103 scopus 로고    scopus 로고
    • High-resolution solid-state NMR spectroscopy of the prion protein HET-s in its amyloid conformation
    • Siemer, A. B., Ritter, C., Ernst, M., Riek, R., and Meier, B. H. (2005) High-resolution solid-state NMR spectroscopy of the prion protein HET-s in its amyloid conformation Angew. Chem., Int. Ed. 44, 2441-2444
    • (2005) Angew. Chem., Int. Ed. , vol.44 , pp. 2441-2444
    • Siemer, A.B.1    Ritter, C.2    Ernst, M.3    Riek, R.4    Meier, B.H.5
  • 42
    • 23244449092 scopus 로고    scopus 로고
    • Parallel β-sheets and polar zippers in amyloid fibrils formed by residues 10-39 of the yeast prion protein Ure2p
    • Chan, J. C., Oyler, N. A., Yau, W. M., and Tycko, R. (2005) Parallel β-sheets and polar zippers in amyloid fibrils formed by residues 10-39 of the yeast prion protein Ure2p Biochemistry 44, 10669-10680
    • (2005) Biochemistry , vol.44 , pp. 10669-10680
    • Chan, J.C.1    Oyler, N.A.2    Yau, W.M.3    Tycko, R.4
  • 43
    • 25144453329 scopus 로고    scopus 로고
    • Determination of membrane protein structure and dynamics by magic-angle-spinning solid-state NMR spectroscopy
    • Andronesi, O. C., Becker, S., Seidel, K., Heise, H., Young, H. S., and Baldus, M. (2005) Determination of membrane protein structure and dynamics by magic-angle-spinning solid-state NMR spectroscopy J. Am. Chem. Soc. 127, 12965-12974
    • (2005) J. Am. Chem. Soc. , vol.127 , pp. 12965-12974
    • Andronesi, O.C.1    Becker, S.2    Seidel, K.3    Heise, H.4    Young, H.S.5    Baldus, M.6
  • 45
    • 33750017513 scopus 로고    scopus 로고
    • Molecular structure of amyloid fibrils: Insights from solid-state NMR
    • Tycko, R. (2006) Molecular structure of amyloid fibrils: Insights from solid-state NMR Q. Rev. Biophys. 39, 1-55
    • (2006) Q. Rev. Biophys. , vol.39 , pp. 1-55
    • Tycko, R.1
  • 46
    • 52449084468 scopus 로고    scopus 로고
    • Native conformation at specific residues in recombinant inclusion body protein in whole cells determined with solid-state NMR spectroscopy
    • Curtis-Fisk, J., Spencer, R. M., and Weliky, D. P. (2008) Native conformation at specific residues in recombinant inclusion body protein in whole cells determined with solid-state NMR spectroscopy J. Am. Chem. Soc. 130, 12568-12569
    • (2008) J. Am. Chem. Soc. , vol.130 , pp. 12568-12569
    • Curtis-Fisk, J.1    Spencer, R.M.2    Weliky, D.P.3
  • 47
    • 62649156736 scopus 로고    scopus 로고
    • Solid-state NMR evidence for inequivalent GvpA subunits in gas vesicles
    • Sivertsen, A. C., Bayro, M. J., Belenky, M., Griffin, R. G., and Herzfeld, J. (2009) Solid-state NMR evidence for inequivalent GvpA subunits in gas vesicles J. Mol. Biol. 387, 1032-1039
    • (2009) J. Mol. Biol. , vol.387 , pp. 1032-1039
    • Sivertsen, A.C.1    Bayro, M.J.2    Belenky, M.3    Griffin, R.G.4    Herzfeld, J.5
  • 50
    • 0033121307 scopus 로고    scopus 로고
    • Selective and extensive C-13 labeling of a membrane protein for solid-state NMR investigations
    • Hong, M. and Jakes, K. (1999) Selective and extensive C-13 labeling of a membrane protein for solid-state NMR investigations J. Biomol. NMR 14, 71-74
    • (1999) J. Biomol. NMR , vol.14 , pp. 71-74
    • Hong, M.1    Jakes, K.2
  • 52
    • 0000321871 scopus 로고
    • Chemical shift correlation spectroscopy in rotating solids: Radio frequency-driven dipolar recoupling and longitudinal exchange
    • Bennett, A. E., Griffin, R. G., Ok, J. H., and Vega, S. (1992) Chemical shift correlation spectroscopy in rotating solids: Radio frequency-driven dipolar recoupling and longitudinal exchange J. Chem. Phys. 96, 8624-8627
    • (1992) J. Chem. Phys. , vol.96 , pp. 8624-8627
    • Bennett, A.E.1    Griffin, R.G.2    Ok, J.H.3    Vega, S.4
  • 54
    • 41449085042 scopus 로고    scopus 로고
    • Radio frequency-driven recoupling at high magic-angle spinning frequencies: Homonuclear recoupling sans heteronuclear decoupling
    • Bayro, M. J., Ramachandran, R., Caporini, M. A., Eddy, M. T., and Griffin, R. G. (2008) Radio frequency-driven recoupling at high magic-angle spinning frequencies: Homonuclear recoupling sans heteronuclear decoupling J. Chem. Phys. 128, 052321
    • (2008) J. Chem. Phys. , vol.128 , pp. 052321
    • Bayro, M.J.1    Ramachandran, R.2    Caporini, M.A.3    Eddy, M.T.4    Griffin, R.G.5
  • 55
    • 0035743161 scopus 로고    scopus 로고
    • Adiabatic dipolar recoupling in solid-state NMR: The DREAM scheme
    • Verel, R., Ernst, M., and Meier, B. H. (2001) Adiabatic dipolar recoupling in solid-state NMR: The DREAM scheme J. Magn. Reson. 150, 81-99
    • (2001) J. Magn. Reson. , vol.150 , pp. 81-99
    • Verel, R.1    Ernst, M.2    Meier, B.H.3
  • 56
    • 33244469975 scopus 로고    scopus 로고
    • Broadband homonuclear correlation spectroscopy at high magnetic fields and MAS frequencies
    • De Paëpe, G., Bayro, M. J., Lewandowski, J., and Griffin, R. G. (2006) Broadband homonuclear correlation spectroscopy at high magnetic fields and MAS frequencies J. Am. Chem. Soc. 128, 1776-1777
    • (2006) J. Am. Chem. Soc. , vol.128 , pp. 1776-1777
    • De Paëpe, G.1    Bayro, M.J.2    Lewandowski, J.3    Griffin, R.G.4
  • 59
    • 0000368822 scopus 로고    scopus 로고
    • Cross polarization in the tilted frame: Assignment and spectral simplification in heteronuclear spin systems
    • Baldus, M., Petkova, A. T., Herzfeld, J., and Griffin, R. G. (1998) Cross polarization in the tilted frame: Assignment and spectral simplification in heteronuclear spin systems Mol. Phys. 95, 1197-1207
    • (1998) Mol. Phys. , vol.95 , pp. 1197-1207
    • Baldus, M.1    Petkova, A.T.2    Herzfeld, J.3    Griffin, R.G.4
  • 60
    • 0000414471 scopus 로고
    • Transferred-echo double-resonance NMR
    • Hing, A. W., Vega, S., and Schaefer, J. (1992) Transferred-echo double-resonance NMR J. Magn. Reson. 96, 205-209
    • (1992) J. Magn. Reson. , vol.96 , pp. 205-209
    • Hing, A.W.1    Vega, S.2    Schaefer, J.3
  • 61
    • 0030810576 scopus 로고    scopus 로고
    • REDOR 3D: Heteronuclear distance measurements in uniformly labeled and natural abundance solids
    • Michal, C. A. and Jelinski, L. W. (1997) REDOR 3D: Heteronuclear distance measurements in uniformly labeled and natural abundance solids J. Am. Chem. Soc. 119, 9059-9060
    • (1997) J. Am. Chem. Soc. , vol.119 , pp. 9059-9060
    • Michal, C.A.1    Jelinski, L.W.2
  • 63
    • 0042995329 scopus 로고    scopus 로고
    • Chemical shift referencing in MAS solid state NMR
    • Morcombe, C. R. and Zilm, K. W. (2003) Chemical shift referencing in MAS solid state NMR J. Magn. Reson. 162, 479-486
    • (2003) J. Magn. Reson. , vol.162 , pp. 479-486
    • Morcombe, C.R.1    Zilm, K.W.2
  • 64
    • 0035742515 scopus 로고    scopus 로고
    • NMR nomenclature. Nuclear spin properties and conventions for chemical shifts (IUPAC Recommendations 2001)
    • Harris, R. K., Becker, E. D., Cabral de Menezes, S. M., Goodfellow, R., and Granger, P. (2001) NMR nomenclature. Nuclear spin properties and conventions for chemical shifts (IUPAC Recommendations 2001) Pure Appl. Chem. 73, 1795-1818
    • (2001) Pure Appl. Chem. , vol.73 , pp. 1795-1818
    • Harris, R.K.1    Becker, E.D.2    Cabral De Menezes, S.M.3    Goodfellow, R.4    Granger, P.5
  • 65
    • 0029400480 scopus 로고
    • NMRPipe: A multidimensional spectral processing system based on UNIX pipes
    • Delaglio, F., Grzesiek, S., Vuister, G. W., Zhu, G., Pfeifer, J., and Bax, A. (1995) NMRPipe: A multidimensional spectral processing system based on UNIX pipes J. Biomol. NMR 6, 277-293
    • (1995) J. Biomol. NMR , vol.6 , pp. 277-293
    • Delaglio, F.1    Grzesiek, S.2    Vuister, G.W.3    Zhu, G.4    Pfeifer, J.5    Bax, A.6
  • 67
    • 0037354231 scopus 로고    scopus 로고
    • RefDB: A database of uniformly referenced protein chemical shifts
    • Zhang, H., Neal, S., and Wishart, D. S. (2003) RefDB: A database of uniformly referenced protein chemical shifts J. Biomol. NMR 25, 173-195
    • (2003) J. Biomol. NMR , vol.25 , pp. 173-195
    • Zhang, H.1    Neal, S.2    Wishart, D.S.3
  • 68
    • 0033003335 scopus 로고    scopus 로고
    • Protein backbone angle restraints from searching a database for chemical shift and sequence homology
    • Cornilescu, G., Delaglio, F., and Bax, A. (1999) Protein backbone angle restraints from searching a database for chemical shift and sequence homology J. Biomol. NMR 13, 289-302
    • (1999) J. Biomol. NMR , vol.13 , pp. 289-302
    • Cornilescu, G.1    Delaglio, F.2    Bax, A.3
  • 69
    • 44049102092 scopus 로고    scopus 로고
    • Molecular conformation and dynamics of the Y145Stop variant of human prion protein in amyloid fibrils
    • Helmus, J. J., Surewicz, K., Nadaud, P. S., Surewicz, W. K., and Jaroniec, C. P. (2008) Molecular conformation and dynamics of the Y145Stop variant of human prion protein in amyloid fibrils Proc. Natl. Acad. Sci. U.S.A. 105, 6284-6289
    • (2008) Proc. Natl. Acad. Sci. U.S.A. , vol.105 , pp. 6284-6289
    • Helmus, J.J.1    Surewicz, K.2    Nadaud, P.S.3    Surewicz, W.K.4    Jaroniec, C.P.5
  • 72
    • 4244050504 scopus 로고    scopus 로고
    • Solid state NMR sequential resonance assignments and conformational analysis of the 2 - 10.4 kDa dimeric form of the Bacillus subtilis protein Crh
    • Bockmann, A., Lange, A., Galinier, A., Luca, S., Giraud, N., Juy, M., Heise, H., Montserret, R., Penin, F., and Baldus, M. (2003) Solid state NMR sequential resonance assignments and conformational analysis of the 2 - 10.4 kDa dimeric form of the Bacillus subtilis protein Crh J. Biomol. NMR 27, 323-339
    • (2003) J. Biomol. NMR , vol.27 , pp. 323-339
    • Bockmann, A.1    Lange, A.2    Galinier, A.3    Luca, S.4    Giraud, N.5    Juy, M.6    Heise, H.7    Montserret, R.8    Penin, F.9    Baldus, M.10
  • 75
    • 10344243524 scopus 로고    scopus 로고
    • Protein solid-state NMR resonance assignments from (C-13, C-13) correlation spectroscopy
    • Seidel, K., Lange, A., Becker, S., Hughes, C. E., Heise, H., and Baldus, M. (2004) Protein solid-state NMR resonance assignments from (C-13, C-13) correlation spectroscopy Phys. Chem. Chem. Phys. 6, 5090-5093
    • (2004) Phys. Chem. Chem. Phys. , vol.6 , pp. 5090-5093
    • Seidel, K.1    Lange, A.2    Becker, S.3    Hughes, C.E.4    Heise, H.5    Baldus, M.6
  • 77
    • 0034846331 scopus 로고    scopus 로고
    • Secondary chemical shifts in immobilized peptides and proteins: A qualitative basis for structure refinement under magic angle spinning
    • Luca, S., Filippov, D. V., van Boom, J. H., Oschkinat, H., de Groot, H. J., and Baldus, M. (2001) Secondary chemical shifts in immobilized peptides and proteins: A qualitative basis for structure refinement under magic angle spinning J. Biomol. NMR 20, 325-331
    • (2001) J. Biomol. NMR , vol.20 , pp. 325-331
    • Luca, S.1    Filippov, D.V.2    Van Boom, J.H.3    Oschkinat, H.4    De Groot, H.J.5    Baldus, M.6
  • 78
    • 0001066789 scopus 로고
    • Molecular Dynamics and Magic Angle Spinning NMR
    • Long, J. R., Sun, B. Q., Bowen, A., and Griffin, R. G. (1994) Molecular Dynamics and Magic Angle Spinning NMR J. Am. Chem. Soc. 116, 11950-11956
    • (1994) J. Am. Chem. Soc. , vol.116 , pp. 11950-11956
    • Long, J.R.1    Sun, B.Q.2    Bowen, A.3    Griffin, R.G.4
  • 80
    • 66049093067 scopus 로고    scopus 로고
    • Experimental characterization of disordered and ordered aggregates populated during the process of amyloid fibril formation
    • Carulla, N., Zhou, M., Arimon, M., Gairí, M., Giralt, E., Robinson, C. V., and Dobson, C. M. (2009) Experimental characterization of disordered and ordered aggregates populated during the process of amyloid fibril formation Proc. Natl. Acad. Sci. U.S.A. 106, 7828-7833
    • (2009) Proc. Natl. Acad. Sci. U.S.A. , vol.106 , pp. 7828-7833
    • Carulla, N.1    Zhou, M.2    Arimon, M.3    Gairí, M.4    Giralt, E.5    Robinson, C.V.6    Dobson, C.M.7
  • 81
    • 0030586945 scopus 로고    scopus 로고
    • Synchrotron X-ray studies suggest that the core of the transthyretin amyloid fibril is a continuous β-sheet helix
    • Blake, C. and Serpell, L. (1996) Synchrotron X-ray studies suggest that the core of the transthyretin amyloid fibril is a continuous β-sheet helix Structure 4, 989-998
    • (1996) Structure , vol.4 , pp. 989-998
    • Blake, C.1    Serpell, L.2
  • 82
    • 0036411969 scopus 로고    scopus 로고
    • Insights into the origin of the tendency of the PI3-SH3 domain to form amyloid fibrils
    • Ventura, S., Lacroix, E., and Serrano, L. (2002) Insights into the origin of the tendency of the PI3-SH3 domain to form amyloid fibrils J. Mol. Biol. 322, 1147-1158
    • (2002) J. Mol. Biol. , vol.322 , pp. 1147-1158
    • Ventura, S.1    Lacroix, E.2    Serrano, L.3
  • 84
    • 0042467550 scopus 로고    scopus 로고
    • Rationalization of the effects of mutations on peptide and protein aggregation rates
    • Chiti, F., Stefani, M., Taddei, N., Ramponi, G., and Dobson, C. M. (2003) Rationalization of the effects of mutations on peptide and protein aggregation rates Nature 424, 805-808
    • (2003) Nature , vol.424 , pp. 805-808
    • Chiti, F.1    Stefani, M.2    Taddei, N.3    Ramponi, G.4    Dobson, C.M.5
  • 87
    • 45749102914 scopus 로고    scopus 로고
    • The Zyggregator method for predicting protein aggregation propensities
    • Tartaglia, G. G. and Vendruscolo, M. (2008) The Zyggregator method for predicting protein aggregation propensities Chem. Soc. Rev. 37, 1395-1401
    • (2008) Chem. Soc. Rev. , vol.37 , pp. 1395-1401
    • Tartaglia, G.G.1    Vendruscolo, M.2
  • 88
    • 0032718386 scopus 로고    scopus 로고
    • Salt-induced detour through compact regions of the protein folding landscape
    • Otzen, D. E. and Oliveberg, M. (1999) Salt-induced detour through compact regions of the protein folding landscape Proc. Natl. Acad. Sci. U.S.A. 96, 11746-11751
    • (1999) Proc. Natl. Acad. Sci. U.S.A. , vol.96 , pp. 11746-11751
    • Otzen, D.E.1    Oliveberg, M.2
  • 89
    • 33748770940 scopus 로고    scopus 로고
    • Minimalist protein model as a diagnostic tool for misfolding and aggregation
    • Matysiak, S. and Clementi, C. (2006) Minimalist protein model as a diagnostic tool for misfolding and aggregation J. Mol. Biol. 363, 297-308
    • (2006) J. Mol. Biol. , vol.363 , pp. 297-308
    • Matysiak, S.1    Clementi, C.2
  • 93
    • 0034598954 scopus 로고    scopus 로고
    • Nature disfavors sequences of alternating polar and non-polar amino acids: Implications for amyloidogenesis
    • Broome, B. M. and Hecht, M. H. (2000) Nature disfavors sequences of alternating polar and non-polar amino acids: Implications for amyloidogenesis J. Mol. Biol. 296, 961-968
    • (2000) J. Mol. Biol. , vol.296 , pp. 961-968
    • Broome, B.M.1    Hecht, M.H.2
  • 94
    • 30344457011 scopus 로고    scopus 로고
    • Probing the mechanism of amyloidogenesis through a tandem repeat of the PI3-SH3 domain suggests a generic model for protein aggregation and fibril formation
    • Bader, R., Bamford, R., Zurdo, J., Luisi, B. F., and Dobson, C. M. (2006) Probing the mechanism of amyloidogenesis through a tandem repeat of the PI3-SH3 domain suggests a generic model for protein aggregation and fibril formation J. Mol. Biol. 356, 189-208
    • (2006) J. Mol. Biol. , vol.356 , pp. 189-208
    • Bader, R.1    Bamford, R.2    Zurdo, J.3    Luisi, B.F.4    Dobson, C.M.5
  • 95
    • 40849120669 scopus 로고    scopus 로고
    • Amyloid fibrils of the HET-s(218-289) prion form a β solenoid with a triangular hydrophobic core
    • Wasmer, C., Lange, A., Van Melckebeke, H., Siemer, A. B., Riek, R., and Meier, B. H. (2008) Amyloid fibrils of the HET-s(218-289) prion form a β solenoid with a triangular hydrophobic core Science 319, 1523-1526
    • (2008) Science , vol.319 , pp. 1523-1526
    • Wasmer, C.1    Lange, A.2    Van Melckebeke, H.3    Siemer, A.B.4    Riek, R.5    Meier, B.H.6
  • 97
    • 57049170316 scopus 로고    scopus 로고
    • Determination of protein structures in the solid state from NMR chemical shifts
    • Robustelli, P., Cavalli, A., and Vendruscolo, M. (2008) Determination of protein structures in the solid state from NMR chemical shifts Structure 16, 1764-1769
    • (2008) Structure , vol.16 , pp. 1764-1769
    • Robustelli, P.1    Cavalli, A.2    Vendruscolo, M.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.