Erratum: Electronic parameters for charge transfer along DNA (European Physical Journal E (2010) 32 (291) DOI:10.1140/epje/i2010-10650-y);Electronic parameters for charge transfer along DNA

European Physical Journal E

Volumn 32, Issue 3, 2010, Pages 291-305

  Hawke, L G D ^a   Kalosakas, G ^a   Simserides, C ^b  

^a UNIVERSITY OF PATRAS   (Greece)

^b INSTITUTE OF NANOSCIENCE AND NANOTECHNOLOGY   (Greece)

Author keywords

[No Author keywords available]

Indexed keywords

BINDING ENERGY; CALCULATIONS; DNA; POSITIVE IONS; QUANTUM CHEMISTRY; WAVE FUNCTIONS;

DNA DOUBLE HELICES; ELECTRONIC PARAMETERS; ELECTRONS AND HOLES; EXPERIMENTAL VALUES; HOMO AND LUMO ENERGIES; LINEAR COMBINATION OF ATOMIC ORBITALS; PHENOMENOLOGICAL DESCRIPTION; TRANSFER PARAMETERS;

CHARGE TRANSFER;

ADENINE; CYTOSINE; DNA; GUANINE; THYMINE;

ARTICLE; BASE PAIRING; BINDING SITE; CHEMICAL STRUCTURE; CHEMISTRY; ELECTRON; ELECTRON TRANSPORT;

ADENINE; BASE PAIRING; BINDING SITES; CYTOSINE; DNA; ELECTRON TRANSPORT; ELECTRONS; GUANINE; MODELS, MOLECULAR; THYMINE;

EID: 77955713570     PISSN: 12928941     EISSN: 1292895X     Source Type: Journal    
DOI: 10.1140/epje/i2011-11118-4     Document Type: Erratum

References (109)

1. C. Dekker, M. Ratner, Phys. World, August 2001 issue, 29 (2001)
2. K. Keren M. Krueger R. Gilad G. Ben-Yoseph U. Sivan E. Braun 2002 Science 297 72 2002Sci...297...72K
3. N.C. Seeman 2003 Nature 421 427 2052315 2003Natur.421..427S
4. R.G. Endres D.L. Cox R.R.P. Singh 2004 Rev. Mod. Phys. 76 195 2004RvMP...76..195E
5. C.J. Burrows J.G. Muller 1998 Chem. Rev. 98 1109
6. J. Cadet, in DNA Adducts: Identification and Significance, edited by K. Hemminki, A. Dipple, D.E.F. Shiker, F.F. Kadlubar, D. Segerback, H. Bartsch (IARC, Lyon, 1994)
7. P.J. Dandliker R.E. Holmlin J.K. Barton 1997 Science 275 1465
8. S.R. Rajski B.A. Jackson J.K. Barton 2000 Mutation Res. 447 49
9. Y. Zhang R.H. Austin J. Kraeft E.C. Cox N.P. Ong 2002 Phys. Rev. Lett. 89 198102 2002PhRvL..89s8102Z
10. A.J. Storm J. van Noort S. de Vries C. Dekker 2001 Appl. Phys. Lett. 79 3881 2001ApPhL..79.3881S
11. P.J. de Pablo F. Moreno-Herrero J. Colchero J. Go 2000 Phys. Rev. Lett. 85 4992 2000PhRvL..85.4992D
12. K.-H. Yoo D.H. Ha J.-O. Lee J.W. Park Jinhee Kim J.J. Kim H.-Y. Lee T. Kawai Han Yong Choi 2001 Phys. Rev. Lett. 87 198102 2001PhRvL..87s8102Y
13. L. Cai H. Tabata T. Kawai 2000 Appl. Phys. Lett. 77 3105 2000ApPhL..77.3105C
14. H.W. Fink C. Schonenberger 1999 Nature 398 407 1999Natur.398..407F
15. P. Tran B. Alavi G. Gruner 2000 Phys. Rev. Lett. 85 1564 2000PhRvL..85.1564T
16. Z. Kutnjak C. Filipič R. Podgornik L. Nordenskiöld N. Korolev 2003 Phys. Rev. Lett. 90 098101 2003PhRvL..90i8101K
17. J.B. MacNaughton A. Moewes J.S. Lee S.D. Wettig H.-B. Kraatz L.Z. Ouyang W.Y. Ching E.Z. Kurmaev 2006 J. Phys. Chem. B 110 15742
18. S.S. Mallajosyula A. Datta S.K. Pati 2005 Synth. Met. 155 398
19. P. Maragakis R.L. Barnett E. Kaxiras M. Elstner T. Frauenheim 2002 Phys. Rev. B 66 241104 2002PhRvB..66x1104M
20. A. Rakitin P. Aich C. Papadopoulos Yu. Kobzar A.S. Vedeneev J.S. Lee J.M. Xu 2001 Phys. Rev. Lett. 86 3670 2001PhRvL..86.3670R
21. M. Fuentes-Cabrera B.G. Sumpter J.C. Wells 2005 J. Phys. Chem. B 109 21135
22. M. Fuentes-Cabrera B.G. Sumpter P. Lipkowski J.C. Wells 2006 J. Phys. Chem. B 110 6379
23. M. Fuentes-Cabrera X. Zhao P.C. Kent B.G. Sumpter 2007 J. Phys. Chem. B 111 9057
24. M.R. Arkin E.D.A. Stemp R.E. Holmlin J.K. Barton A. Hörmann E.J.C. Olson P.F. Barbara 1996 Science 273 475 1996Sci...273..475A
25. D.B. Hall R.E. Holmlin J.K. Barton 1996 Nature 382 731 1996Natur.382..731H
26. D. Porath A. Bezryadin S. de Vries C. Dekker 2000 Nature 403 635 2000Natur.403..635P
27. Ch. Adesi S. Walch M.P. Anantram 2003 Phys. Rev. B 67 081405(R) 2003PhRvB..67h1405A
28. Ch. Adesi M.P. Anantram 2003 Appl. Phys. Lett. 82 2353 2003ApPhL..82.2353A
29. S.V. Rakhmanova E.M. Conwell 2001 J. Phys. Chem. B 105 2056
30. W. Zhang A.O. Govorov S.E. Ulloa 2002 Phys. Rev. B 66 060303 2002PhRvB..66f0303Z
31. S. Komineas G. Kalosakas A.R. Bishop 2002 Phys. Rev. E 65 061905 2002PhRvE..65f1905K
32. P. Maniadis G. Kalosakas 2003 Phys. Rev. B 68 174304 2003PhRvB..68q4304M
33. M.R. Singh 2004 J. Biomater. Sci. Polym. Edn. 15 1533
34. G.P. Triberis C. Simserides V.C. Karavolas 2005 J. Phys.: Condens. Matter 17 2681 2005JPCM...17.2681T
35. G.P. Triberis M. Dimakogianni 2009 J. Phys.: Condens. Matter 21 035114
36. Y.-J. Ye R.-S. Chen A. Martinez P. Otto J. Ladik 1999 Solid State Commun. 112 139 1999SSCom.112..139Y
37. P.T. Henderson D. Jones G. Hampikian Y. Kan G.B. Schuster 1999 Proc. Natl. Acad. Sci. U.S.A. 96 8353 1999PNAS...96.8353H
38. R. Bruinsma G. Grüner M.R. D'Orsogna J. Rudnick 2000 Phys. Rev. Lett. 85 4393 2000PhRvL..85.4393B
39. G. Kalosakas K. Rasmussen A.R. Bishop 2003 J. Chem. Phys. 118 3731 2003JChPh.118.3731K
40. G. Kalosakas K. Rasmussen A.R. Bishop 2004 Synth. Met. 141 93
41. F.C. Grozema S. Tonzani Y.A. Berlin G.C. Schatz L.D.A. Siebbeles M.A. Ratner 2008 J. Am. Chem. Soc. 130 5157
42. P.B. Woiczikowski T. Kubar R. Gutierrez R.A. Caetano G. Cuniberti M. Elstner 2009 J. Chem. Phys. 130 215104 2009JChPh.130u5104W
43. E. Meggers M.E. Michel-Beyerle B. Giese 1998 J. Am. Chem. Soc. 120 12950
44. B. Giese 2000 Acc. Chem. Res. 33 631
45. Y.A. Berlin A.L. Burin M.A. Ratner 2000 J. Phys. Chem. A 104 443
46. Y.A. Berlin A.L. Burin M.A. Ratner 2001 J. Am. Chem. Soc. 123 260
47. Z.G. Yu X. Song 2001 Phys. Rev. Lett. 86 6018 2001PhRvL..86.6018Y
48. D. Hennig 2002 Eur. Phys. J. B 30 211 2002EPJB...30..211H
49. D. Hennig E.B. Starikov J.F.R. Archilla F. Palmero 2004 J. Biol. Phys. 30 227
50. G. Kalosakas K.L. Ngai S. Flach 2005 Phys. Rev. E 71 061901 2005PhRvE..71f1901K
51. P. Maniadis G. Kalosakas K. Rasmussen A.R. Bishop 2005 Phys. Rev. E 72 021912 2005PhRvE..72b1912M
52. E. Diaz R.P.A. Lima F. Dominguez-Adame 2008 Phys. Rev. B 78 134303 2008PhRvB..78m4303D
53. L.G.D. Hawke G. Kalosakas C. Simserides 2009 Mol. Phys. 107 1755
54. L.G.D. Hawke C. Simserides G. Kalosakas 2009 Mater. Sci. Eng. B 165 266
55. W.A. Harrison, Electronic Structure and the Properties of Solids, 2nd edition (Dover, New York, 1989)
56. J.C. Slater G.F. Koster 1954 Phys. Rev. 94 1498 0055.44404 1954PhRv...94.1498S
57. M. Menon R.E. Allen 1988 Phys. Rev. B 38 6196 1988PhRvB..38.6196M
58. N. Lathiotakis A.N. Andriotis 1993 Solid State Commun. 87 871 1993SSCom..87..871L
59. M. Menon J. Connolly N. Lathiotakis A. Andriotis 1994 Phys. Rev. B 50 8903 1994PhRvB..50.8903M
60. N. Rosch A.A. Voityuk 2004 Top. Curr. Chem. 237 37
61. http://chemistry.gsu.edu/Glactone/PDB/pdb.html
62. N.S. Hush A.S. Cheung 1975 Chem. Phys. Lett. 34 11 1975CPL....34...11H
63. G. Lauer W. Schafer A. Schweig 1975 Tetrahedron Lett. 45 3939
64. D. Dougherty K. Wittel J. Meeks S.P. McGlynn 1976 J. Am. Chem. Soc. 98 3815
65. J. Lin C. Yu S. Peng I. Akiyama K. Li L.K. Lee P.R. LeBreton 1980 J. Am. Chem. Soc. 102 4627
66. J. Lin C. Yu S. Peng I. Akiyama K. Li L.K. Lee P.R. LeBreton 1980 J. Phys. Chem. 84 1006
67. S. Urano X. Yang P. R. LeBreton 1989 J. Mol. Sruct. 214 315 1989JMoSt.214..315U
68. D. Voet W.B. Gratzer R.A. Cox P. Doty 1963 Biopolymers 1 193
69. L.B. Clark G.G. Peschel I. Tinoco Jr. 1965 J. Phys. Chem. 69 3615
70. D.W. Miles R.K. Robins H. Eyring 1967 Proc. Natl. Acad. Sci. U.S.A. 57 1139 1967PNAS...57.1138M
71. T. Yamada H. Fukutome 1968 Biopolymers 6 43
72. W. Voelter R. Records E. Bunnenberg C. Djerassi 1968 J. Am. Chem. Soc. 90 6163
73. A.F. Fucaloro L.S. Forster 1971 J. Am. Chem. Soc. 93 6443
74. W.C. Brunner M.F. Maestre 1975 Biopolymers 14 555
75. C.A. Sprecher W.C. Johnson 1977 Biopolymers 16 2243
76. K. Raksanyi I. Foldvary J. Fidy L. Kittler 1978 Biopolymers 17 887
77. Y. Matsuoka B. Norden 1982 J. Phys. Chem. 86 1378
78. F. Zaloudek J.S. Novros L.B. Clark 1985 J. Am. Chem. Soc. 107 7344
79. L.B. Clark 1990 J. Phys. Chem. 94 2873
80. A. Holmen A. Broo B. Albinsson B. Norden 1997 J. Am. Chem. Soc. 119 12240
81. A.O. Colson B. Besler D.M. Close M.D. Sevilla 1992 J. Phys. Chem. 96 661
82. H. Sugiyama I. Saito 1996 J. Am. Chem. Soc. 118 7063
83. M. Hutter T. Clark 1996 J. Am. Chem. Soc. 118 7574
84. M.P. Fülscher B.O. Roos 1995 J. Am. Chem. Soc. 117 2089
85. J. Lorentzon M.P. Fülscher B.O. Roos 1995 J. Am. Chem. Soc. 117 9265
86. M.P. Fülscher L. Serrano-Andres B.O. Roos 1997 J. Am. Chem. Soc. 119 6168
87. M.K. Shukla P.C. Mishra 1999 Chem. Phys. 240 319 1999CP....240..319S
88. B. Mennucci A. Toniolo J. Tomasi 2001 J. Phys. Chem. A. 105 4749
89. X. Li Z. Cai M.D. Sevilla 2001 J. Phys. Chem. B 105 10115
90. X. Li Z. Cai M.D. Sevilla 2002 J. Phys. Chem. A 106 9345
91. A.L. Sobolewski W. Domcke 2002 Eur. Phys. J. D 20 369 2002EPJD...20..369S
92. N. Ismail L. Blancafort M. Olivucci B. Kohler M.A. Robb 2002 J. Am. Chem. Soc. 124 6818
93. M.K. Shukla J. Leszczynski 2002 J. Phys. Chem. A. 106 11338
94. M.K. Shukla J. Leszczynski 2004 J. Comput. Chem. 25 768
95. D. Varsano R. Di Felice M.A.L. Marques A. Rubio 2006 J. Phys. Chem. B 110 7129
96. T. Fleig S. Knecht C. Hättig 2007 J. Phys. Chem. A 111 5482
97. H. Zhang X.Q. Li P. Ham X.Y. Yu Y.J. Yan 2002 J. Chem. Phys. 117 4578 2002JChPh.117.4578Z
98. M.K. Shukla J. Leszczynski 2002 J. Phys. Chem. A 106 4709
99. http://www.jmol.org/
100. T. Cramer S. Krapf T. Koslowski 2004 J. Phys. Chem. B 108 11812
101. R. Di Felice A. Calzolari E. Molinari 2001 Phys. Rev. B 65 045104 2002PhRvB..65d5104D
102. A.A. Voityuk J. Jortner M. Bixon N. Rösch 2001 J. Chem. Phys. 114 5614 2001JChPh.114.5614V
103. R.G. Endres, D.L. Cox, R.R.P. Singh, arXiv:cond-mat/0201404v2 (2002)
104. L. Blancafort A.A. Voityuk 2006 J. Phys. Chem. A 110 6426
105. A. Migliore S. Corni D. Varsano M.L. Klein R. Di Felice 2009 J. Phys. Chem. B 113 9402
106. H. Mehrez M.P. Anantram 2005 Phys. Rev. B 71 115405 2005PhRvB..71k5405M
107. A.A. Voityuk N. Rösch M. Bixon J. Jortner 2000 J. Phys. Chem. B 104 9740
108. K. Senthilkumar F.C. Grozema C.F. Guerra F.M. Bickelhaupt F.D. Lewis Y.A. Berlin M.A. Ratner L.D.A. Siebbeles 2005 J. Am. Chem. Soc. 127 14894
109. T. Kubar P.B. Woiczikowski G. Cuniberti M. Elstner 2008 J. Phys. Chem. B 112 7937