-
1
-
-
28044471565
-
MicroRNA functions in animal development and human disease
-
10.1242/dev.02073, 16224045
-
Alvarez-Garcia I, Miska EA. MicroRNA functions in animal development and human disease. Development 2005, 132:4653-4662. 10.1242/dev.02073, 16224045.
-
(2005)
Development
, vol.132
, pp. 4653-4662
-
-
Alvarez-Garcia, I.1
Miska, E.A.2
-
2
-
-
34547938506
-
MicroRNAs: a safeguard against turmoil?
-
10.1016/j.cell.2007.08.010, 17719533
-
Leung AK, Sharp PA. microRNAs: a safeguard against turmoil?. Cell 2007, 130:581-585. 10.1016/j.cell.2007.08.010, 17719533.
-
(2007)
Cell
, vol.130
, pp. 581-585
-
-
Leung, A.K.1
Sharp, P.A.2
-
3
-
-
40949122258
-
A microRNA component of the hypoxic response
-
10.1038/sj.cdd.4402310, 18219318
-
Kulshreshtha R, Davuluri RV, Calin GA, Ivan M. A microRNA component of the hypoxic response. Cell Death Differ 2008, 15:667-671. 10.1038/sj.cdd.4402310, 18219318.
-
(2008)
Cell Death Differ
, vol.15
, pp. 667-671
-
-
Kulshreshtha, R.1
Davuluri, R.V.2
Calin, G.A.3
Ivan, M.4
-
4
-
-
65249180150
-
SnapShot: MicroRNAs in Cancer
-
e1, 10.1016/j.cell.2009.04.040, 19410551
-
Spizzo R, Nicoloso MS, Croce CM, Calin GA. SnapShot: MicroRNAs in Cancer. Cell 2009, 137:586-586. e1, 10.1016/j.cell.2009.04.040, 19410551.
-
(2009)
Cell
, vol.137
, pp. 586-586
-
-
Spizzo, R.1
Nicoloso, M.S.2
Croce, C.M.3
Calin, G.A.4
-
5
-
-
58449134534
-
Small silencing RNAs: an expanding universe
-
10.1038/nrg2504, 2724769, 19148191
-
Ghildiyal M, Zamore PD. Small silencing RNAs: an expanding universe. Nat Rev Genet 2009, 10:94-108. 10.1038/nrg2504, 2724769, 19148191.
-
(2009)
Nat Rev Genet
, vol.10
, pp. 94-108
-
-
Ghildiyal, M.1
Zamore, P.D.2
-
6
-
-
58249088751
-
MicroRNAs: target recognition and regulatory functions
-
10.1016/j.cell.2009.01.002, 19167326
-
Bartel DP. MicroRNAs: target recognition and regulatory functions. Cell 2009, 136:215-233. 10.1016/j.cell.2009.01.002, 19167326.
-
(2009)
Cell
, vol.136
, pp. 215-233
-
-
Bartel, D.P.1
-
7
-
-
58849112575
-
Biogenesis of small RNAs in animals
-
10.1038/nrm2632, 19165215
-
Kim VN, Han J, Siomi MC. Biogenesis of small RNAs in animals. Nat Rev Mol Cell Biol 2009, 10:126-139. 10.1038/nrm2632, 19165215.
-
(2009)
Nat Rev Mol Cell Biol
, vol.10
, pp. 126-139
-
-
Kim, V.N.1
Han, J.2
Siomi, M.C.3
-
8
-
-
34250670789
-
Drosha in primary microRNA processing
-
10.1101/sqb.2006.71.041, 17381280
-
Lee Y, Han J, Yeom KH, Jin H, Kim VN. Drosha in primary microRNA processing. Cold Spring Harb Symp Quant Biol 2006, 71:51-57. 10.1101/sqb.2006.71.041, 17381280.
-
(2006)
Cold Spring Harb Symp Quant Biol
, vol.71
, pp. 51-57
-
-
Lee, Y.1
Han, J.2
Yeom, K.H.3
Jin, H.4
Kim, V.N.5
-
9
-
-
1842715778
-
Dicers at RISC; the mechanism of RNAi
-
10.1016/S0092-8674(04)00293-4, 15066275
-
Tijsterman M, Plasterk RH. Dicers at RISC; the mechanism of RNAi. Cell 2004, 117:1-3. 10.1016/S0092-8674(04)00293-4, 15066275.
-
(2004)
Cell
, vol.117
, pp. 1-3
-
-
Tijsterman, M.1
Plasterk, R.H.2
-
10
-
-
38549150275
-
MiRBase: tools for microRNA genomics
-
10.1093/nar/gkm952, 2238936, 17991681
-
Griffiths-Jones S, Saini HK, van Dongen S, Enright AJ. miRBase: tools for microRNA genomics. NAR 2008, 36:D154-D158. 10.1093/nar/gkm952, 2238936, 17991681.
-
(2008)
NAR
, vol.36
-
-
Griffiths-Jones, S.1
Saini, H.K.2
van Dongen, S.3
Enright, A.J.4
-
11
-
-
33845755467
-
Illuminating the silence: understanding the structure and function of small RNAs
-
10.1038/nrm2085, 17183358
-
Rana TM. Illuminating the silence: understanding the structure and function of small RNAs. Nat Rev Mol Cell Biol 2007, 8:23-36. 10.1038/nrm2085, 17183358.
-
(2007)
Nat Rev Mol Cell Biol
, vol.8
, pp. 23-36
-
-
Rana, T.M.1
-
12
-
-
54349096334
-
The microRNA-argonaute complex: a platform for mRNA modulation
-
Hammell CM. The microRNA-argonaute complex: a platform for mRNA modulation. RNA Biol 2008, 5:123-127.
-
(2008)
RNA Biol
, vol.5
, pp. 123-127
-
-
Hammell, C.M.1
-
13
-
-
43449090367
-
MicroRNA-10a binds the 5'UTR of ribosomal protein mRNAs and enhances their translation
-
10.1016/j.molcel.2008.05.001, 18498749
-
Ørom UA, Nielsen FC, Lund AH. MicroRNA-10a binds the 5'UTR of ribosomal protein mRNAs and enhances their translation. Mol Cell 2008, 30:460-471. 10.1016/j.molcel.2008.05.001, 18498749.
-
(2008)
Mol Cell
, vol.30
, pp. 460-471
-
-
Ørom, U.A.1
Nielsen, F.C.2
Lund, A.H.3
-
14
-
-
38749083425
-
MicroRNAs and cancer: profile, profile, profile
-
10.1002/ijc.23343, 18098138
-
Barbarotto E, Schmittgen TD, Calin GA. MicroRNAs and cancer: profile, profile, profile. Int J Cancer 2008, 122:969-977. 10.1002/ijc.23343, 18098138.
-
(2008)
Int J Cancer
, vol.122
, pp. 969-977
-
-
Barbarotto, E.1
Schmittgen, T.D.2
Calin, G.A.3
-
15
-
-
33144490646
-
A microRNA expression signature of human solid tumors defines cancer gene targets
-
10.1073/pnas.0510565103, 1413718, 16461460
-
Volinia S, Calin GA, Liu CG, Ambs S, Cimmino A, Petrocca F, Visone R, Iorio M, Roldo C, Ferracin M, Prueitt RL, Yanaihara N, Lanza G, Scarpa A, Vecchione A, Negrini M, Harris CC, Croce CM. A microRNA expression signature of human solid tumors defines cancer gene targets. Proc Natl Acad Sci USA 2006, 103:2257-2261. 10.1073/pnas.0510565103, 1413718, 16461460.
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, pp. 2257-2261
-
-
Volinia, S.1
Calin, G.A.2
Liu, C.G.3
Ambs, S.4
Cimmino, A.5
Petrocca, F.6
Visone, R.7
Iorio, M.8
Roldo, C.9
Ferracin, M.10
Prueitt, R.L.11
Yanaihara, N.12
Lanza, G.13
Scarpa, A.14
Vecchione, A.15
Negrini, M.16
Harris, C.C.17
Croce, C.M.18
-
16
-
-
50849104285
-
Mechanisms of microRNA deregulation in human cancer
-
Deng S, Calin GA, Croce CM, Coukos G, Zhang L. Mechanisms of microRNA deregulation in human cancer. Cell Cycle 2008, 7:2643-2646.
-
(2008)
Cell Cycle
, vol.7
, pp. 2643-2646
-
-
Deng, S.1
Calin, G.A.2
Croce, C.M.3
Coukos, G.4
Zhang, L.5
-
17
-
-
59149104687
-
Targeting of microRNAs for therapeutics
-
10.1042/BST0361197, 19021524
-
Stenvang J, Lindow M, Kauppinen S. Targeting of microRNAs for therapeutics. Biochem Soc Trans 2008, 36:1197-1200. 10.1042/BST0361197, 19021524.
-
(2008)
Biochem Soc Trans
, vol.36
, pp. 1197-1200
-
-
Stenvang, J.1
Lindow, M.2
Kauppinen, S.3
-
18
-
-
58649087374
-
MiR-21: a small multi-faceted RNA
-
10.1111/j.1582-4934.2008.00556.x, 19175699
-
Krichevsky AM, Gabriely G. miR-21: a small multi-faceted RNA. J Cell Mol Med 2009, 13:39-53. 10.1111/j.1582-4934.2008.00556.x, 19175699.
-
(2009)
J Cell Mol Med
, vol.13
, pp. 39-53
-
-
Krichevsky, A.M.1
Gabriely, G.2
-
19
-
-
34547524771
-
MicroRNA-21 regulates expression of the PTEN tumor suppressor gene in human hepatocellular cancer
-
10.1053/j.gastro.2007.05.022, 17681183
-
Meng F, Henson R, Wehbe-Janek H, Ghoshal K, Jacob ST, Patel T. MicroRNA-21 regulates expression of the PTEN tumor suppressor gene in human hepatocellular cancer. Gastroenterology 2007, 133:647-658. 10.1053/j.gastro.2007.05.022, 17681183.
-
(2007)
Gastroenterology
, vol.133
, pp. 647-658
-
-
Meng, F.1
Henson, R.2
Wehbe-Janek, H.3
Ghoshal, K.4
Jacob, S.T.5
Patel, T.6
-
20
-
-
2542626605
-
Reduced expression of the let-7 microRNAs in human lung cancers in association with shortened postoperative survival
-
10.1158/0008-5472.CAN-04-0637, 15172979
-
Takamizawa J, Konishi H, Yanagisawa K, Tomida S, Osada H, Endoh H, Harano T, Yatabe Y, Nagino M, Nimura Y, Mitsudomi T, Takahashi T. Reduced expression of the let-7 microRNAs in human lung cancers in association with shortened postoperative survival. Cancer Res 2004, 64:3753-3756. 10.1158/0008-5472.CAN-04-0637, 15172979.
-
(2004)
Cancer Res
, vol.64
, pp. 3753-3756
-
-
Takamizawa, J.1
Konishi, H.2
Yanagisawa, K.3
Tomida, S.4
Osada, H.5
Endoh, H.6
Harano, T.7
Yatabe, Y.8
Nagino, M.9
Nimura, Y.10
Mitsudomi, T.11
Takahashi, T.12
-
21
-
-
74249084440
-
MiR-15a and miR-16-1 in cancer: discovery, function and future perspectives
-
10.1038/cdd.2009.69, 19498445
-
Aqeilan RI, Calin GA, Croce CM. miR-15a and miR-16-1 in cancer: discovery, function and future perspectives. Cell Death Differ 2010, 17:215-220. 10.1038/cdd.2009.69, 19498445.
-
(2010)
Cell Death Differ
, vol.17
, pp. 215-220
-
-
Aqeilan, R.I.1
Calin, G.A.2
Croce, C.M.3
-
22
-
-
20044395613
-
RAS is regulated by the let-7 microRNA family
-
10.1016/j.cell.2005.01.014, 15766527
-
Johnson SM, Grosshans H, Shingara J, Byrom M, Jarvis R, Cheng A, Labourier E, Reinert KL, Brown D, Slack FJ. RAS is regulated by the let-7 microRNA family. Cell 2005, 120:635-647. 10.1016/j.cell.2005.01.014, 15766527.
-
(2005)
Cell
, vol.120
, pp. 635-647
-
-
Johnson, S.M.1
Grosshans, H.2
Shingara, J.3
Byrom, M.4
Jarvis, R.5
Cheng, A.6
Labourier, E.7
Reinert, K.L.8
Brown, D.9
Slack, F.J.10
-
23
-
-
34247565615
-
The tumor suppressor microRNA let-7 represses the HMGA2 oncogene
-
10.1101/gad.1540407, 1855228, 17437991
-
Lee YS, Dutta A. The tumor suppressor microRNA let-7 represses the HMGA2 oncogene. Genes Dev 2007, 21:1025-1030. 10.1101/gad.1540407, 1855228, 17437991.
-
(2007)
Genes Dev
, vol.21
, pp. 1025-1030
-
-
Lee, Y.S.1
Dutta, A.2
-
24
-
-
25444520537
-
MiR-15 and miR-16 induce apoptosis by targeting BCL2
-
10.1073/pnas.0506654102, 1236577, 16166262
-
Cimmino A, Calin GA, Fabbri M, Iorio MV, Ferracin M, Shimizu M, Wojcik SE, Aqeilan RI, Zupo S, Dono M, Rassenti L, Alder H, Volinia S, Liu CG, Kipps TJ, Negrini M, Croce CM. miR-15 and miR-16 induce apoptosis by targeting BCL2. Proc Natl Acad Sci USA 2005, 102:13944-13949. 10.1073/pnas.0506654102, 1236577, 16166262.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 13944-13949
-
-
Cimmino, A.1
Calin, G.A.2
Fabbri, M.3
Iorio, M.V.4
Ferracin, M.5
Shimizu, M.6
Wojcik, S.E.7
Aqeilan, R.I.8
Zupo, S.9
Dono, M.10
Rassenti, L.11
Alder, H.12
Volinia, S.13
Liu, C.G.14
Kipps, T.J.15
Negrini, M.16
Croce, C.M.17
-
25
-
-
33644819964
-
Unique microRNA molecular profiles in lung cancer diagnosis and prognosis
-
10.1016/j.ccr.2006.01.025, 16530703
-
Yanaihara N, Caplen N, Bowman E, Seike M, Kumamoto K, Yi M, Stephens RM, Okamoto A, Yokota J, Tanaka T, Calin GA, Liu CG, Croce CM, Harris CC. Unique microRNA molecular profiles in lung cancer diagnosis and prognosis. Cancer Cell 2006, 9:189-198. 10.1016/j.ccr.2006.01.025, 16530703.
-
(2006)
Cancer Cell
, vol.9
, pp. 189-198
-
-
Yanaihara, N.1
Caplen, N.2
Bowman, E.3
Seike, M.4
Kumamoto, K.5
Yi, M.6
Stephens, R.M.7
Okamoto, A.8
Yokota, J.9
Tanaka, T.10
Calin, G.A.11
Liu, C.G.12
Croce, C.M.13
Harris, C.C.14
-
26
-
-
40949137731
-
Hsa-miR-210 Is induced by hypoxia and is an independent prognostic factor in breast cancer
-
10.1158/1078-0432.CCR-07-1755, 18316553
-
Camps C, Buffa FM, Colella S, Moore J, Sotiriou C, Sheldon H, Harris AL, Gleadle JM, Ragoussis J. hsa-miR-210 Is induced by hypoxia and is an independent prognostic factor in breast cancer. Clin Cancer Res 2008, 14:1340-1348. 10.1158/1078-0432.CCR-07-1755, 18316553.
-
(2008)
Clin Cancer Res
, vol.14
, pp. 1340-1348
-
-
Camps, C.1
Buffa, F.M.2
Colella, S.3
Moore, J.4
Sotiriou, C.5
Sheldon, H.6
Harris, A.L.7
Gleadle, J.M.8
Ragoussis, J.9
-
27
-
-
67651165020
-
A miR-200 microRNA cluster as prognostic marker in advanced ovarian cancer
-
10.1016/j.ygyno.2009.05.022, 19501389
-
Hu X, Macdonald DM, Huettner PC, Feng Z, El Naqa IM, Schwarz JK, Mutch DG, Grigsby PW, Powell SN, Wang X. A miR-200 microRNA cluster as prognostic marker in advanced ovarian cancer. Gynecol Oncol 2009, 114:457-464. 10.1016/j.ygyno.2009.05.022, 19501389.
-
(2009)
Gynecol Oncol
, vol.114
, pp. 457-464
-
-
Hu, X.1
Macdonald, D.M.2
Huettner, P.C.3
Feng, Z.4
El Naqa, I.M.5
Schwarz, J.K.6
Mutch, D.G.7
Grigsby, P.W.8
Powell, S.N.9
Wang, X.10
-
28
-
-
77951181323
-
MicroRNA-223 reversibly regulates erythroid and megakaryocytic differentiation of K562 cells
-
10.1111/j.1582-4934.2008.00585.x, 19017354
-
Yuan JY, Wang F, Yu J, Yang GH, Liu XL, Zhang JW. MicroRNA-223 reversibly regulates erythroid and megakaryocytic differentiation of K562 cells. J Cell Mol Med 2009, 13:4551-4559. 10.1111/j.1582-4934.2008.00585.x, 19017354.
-
(2009)
J Cell Mol Med
, vol.13
, pp. 4551-4559
-
-
Yuan, J.Y.1
Wang, F.2
Yu, J.3
Yang, G.H.4
Liu, X.L.5
Zhang, J.W.6
-
29
-
-
65549114101
-
Abate and switch: miR-145 in stem cell differentiation
-
10.1016/j.cell.2009.04.059, 19450510
-
Chivukula RR, Mendell JT. Abate and switch: miR-145 in stem cell differentiation. Cell 2009, 137:606-608. 10.1016/j.cell.2009.04.059, 19450510.
-
(2009)
Cell
, vol.137
, pp. 606-608
-
-
Chivukula, R.R.1
Mendell, J.T.2
-
30
-
-
74249123570
-
The miR-34 family in cancer and apoptosis
-
10.1038/cdd.2009.56, 19461653
-
Hermeking H. The miR-34 family in cancer and apoptosis. Cell Death Differ 2010, 17:193-199. 10.1038/cdd.2009.56, 19461653.
-
(2010)
Cell Death Differ
, vol.17
, pp. 193-199
-
-
Hermeking, H.1
-
31
-
-
44349088251
-
MicroRNA-9 directs late organizer activity of the midbrain-hindbrain boundary
-
10.1038/nn.2115, 18454145
-
Leucht C, Stigloher C, Wizenmann A, Klafke R, Folchert A, Bally-Cuif L. MicroRNA-9 directs late organizer activity of the midbrain-hindbrain boundary. Nat Neurosci 2008, 11:641-648. 10.1038/nn.2115, 18454145.
-
(2008)
Nat Neurosci
, vol.11
, pp. 641-648
-
-
Leucht, C.1
Stigloher, C.2
Wizenmann, A.3
Klafke, R.4
Folchert, A.5
Bally-Cuif, L.6
-
32
-
-
28444449496
-
The microRNA miR-196 acts upstream of Hoxb8 and Shh in limb development
-
10.1038/nature04138, 16319892
-
Hornstein E, Mansfield JH, Yekta S, Hu JK, Harfe BD, McManus MT, Baskerville S, Bartel DP, Tabin CJ. The microRNA miR-196 acts upstream of Hoxb8 and Shh in limb development. Nature 2005, 438:671-674. 10.1038/nature04138, 16319892.
-
(2005)
Nature
, vol.438
, pp. 671-674
-
-
Hornstein, E.1
Mansfield, J.H.2
Yekta, S.3
Hu, J.K.4
Harfe, B.D.5
McManus, M.T.6
Baskerville, S.7
Bartel, D.P.8
Tabin, C.J.9
-
33
-
-
31144479591
-
A brain-specific microRNA regulates dendritic spine development
-
10.1038/nature04367, 16421561
-
Schratt GM, Tuebing F, Nigh EA, Kane CG, Sabatini ME, Kiebler M, Greenberg ME. A brain-specific microRNA regulates dendritic spine development. Nature 2006, 439:283-289. 10.1038/nature04367, 16421561.
-
(2006)
Nature
, vol.439
, pp. 283-289
-
-
Schratt, G.M.1
Tuebing, F.2
Nigh, E.A.3
Kane, C.G.4
Sabatini, M.E.5
Kiebler, M.6
Greenberg, M.E.7
-
34
-
-
31744432337
-
The role of microRNA-1 and microRNA-133 in skeletal muscle proliferation and differentiation
-
10.1038/ng1725, 2538576, 16380711
-
Chen JF, Mandel EM, Thomson JM, Wu Q, Callis TE, Hammond SM, Conlon FL, Wang DZ. The role of microRNA-1 and microRNA-133 in skeletal muscle proliferation and differentiation. Nat Genet 2006, 38:228-233. 10.1038/ng1725, 2538576, 16380711.
-
(2006)
Nat Genet
, vol.38
, pp. 228-233
-
-
Chen, J.F.1
Mandel, E.M.2
Thomson, J.M.3
Wu, Q.4
Callis, T.E.5
Hammond, S.M.6
Conlon, F.L.7
Wang, D.Z.8
-
35
-
-
1942494040
-
Expression profiling of mammalian microRNAs uncovers a subset of brain-expressed microRNAs with possible roles in murine and human neuronal differentiation
-
10.1186/gb-2004-5-3-r13, 395763, 15003116
-
Sempere LF, Freemantle S, Pitha-Rowe I, Moss E, Dmitrovsky E, Ambros V. Expression profiling of mammalian microRNAs uncovers a subset of brain-expressed microRNAs with possible roles in murine and human neuronal differentiation. Genome Biol 2004, 5:R13. 10.1186/gb-2004-5-3-r13, 395763, 15003116.
-
(2004)
Genome Biol
, vol.5
-
-
Sempere, L.F.1
Freemantle, S.2
Pitha-Rowe, I.3
Moss, E.4
Dmitrovsky, E.5
Ambros, V.6
-
36
-
-
20844463414
-
Identification of microRNAs of the herpesvirus family
-
10.1038/nmeth746, 15782219
-
Pfeffer S, Sewer A, Lagos-Quintana M, Sheridan R, Sander C, Grasser FA, van Dyk LF, Ho CK, Shuman S, Chien M, Russo JJ, Ju J, Randall G, Lindenbach BD, Rice CM, Simon V, Ho DD, Zavolan M, Tuschl T. Identification of microRNAs of the herpesvirus family. Nat Methods 2005, 2:269-276. 10.1038/nmeth746, 15782219.
-
(2005)
Nat Methods
, vol.2
, pp. 269-276
-
-
Pfeffer, S.1
Sewer, A.2
Lagos-Quintana, M.3
Sheridan, R.4
Sander, C.5
Grasser, F.A.6
van Dyk, L.F.7
Ho, C.K.8
Shuman, S.9
Chien, M.10
Russo, J.J.11
Ju, J.12
Randall, G.13
Lindenbach, B.D.14
Rice, C.M.15
Simon, V.16
Ho, D.D.17
Zavolan, M.18
Tuschl, T.19
-
37
-
-
29144470346
-
Real-time quantification of microRNAs by stem-loop RT-PCR
-
10.1093/nar/gni178, 1292995, 16314309
-
Chen C, Ridzon DA, Broomer AJ, Zhou Z, Lee DH, Nguyen JT, Barbisin M, Xu NL, Mahuvakar VR, Andersen MR, Lao KQ, Livak KJ, Guegler KJ. Real-time quantification of microRNAs by stem-loop RT-PCR. Nucleic Acids Res 2005, 33:e179. 10.1093/nar/gni178, 1292995, 16314309.
-
(2005)
Nucleic Acids Res
, vol.33
-
-
Chen, C.1
Ridzon, D.A.2
Broomer, A.J.3
Zhou, Z.4
Lee, D.H.5
Nguyen, J.T.6
Barbisin, M.7
Xu, N.L.8
Mahuvakar, V.R.9
Andersen, M.R.10
Lao, K.Q.11
Livak, K.J.12
Guegler, K.J.13
-
38
-
-
13944262052
-
A custom microarray platform for analysis of microRNA gene expression
-
10.1038/nmeth704, 15782152
-
Thomson JM, Parker J, Perou CM, Hammond SM. A custom microarray platform for analysis of microRNA gene expression. Nat Methods 2004, 1:47-53. 10.1038/nmeth704, 15782152.
-
(2004)
Nat Methods
, vol.1
, pp. 47-53
-
-
Thomson, J.M.1
Parker, J.2
Perou, C.M.3
Hammond, S.M.4
-
39
-
-
34249857357
-
A novel microarray approach reveals new tissue-specific signatures of known and predicted mammalian microRNAs
-
10.1093/nar/gkl1118, 1874652, 17355992
-
Beuvink I, KolbF A, Budach W, Garnier A, Lange J, Natt F, Dengler U, Hall J, Filipowicz W, Weiler J. A novel microarray approach reveals new tissue-specific signatures of known and predicted mammalian microRNAs. Nucleic Acids Res 2007, 35:e52. 10.1093/nar/gkl1118, 1874652, 17355992.
-
(2007)
Nucleic Acids Res
, vol.35
-
-
Beuvink, I.1
KolbF, A.2
Budach, W.3
Garnier, A.4
Lange, J.5
Natt, F.6
Dengler, U.7
Hall, J.8
Filipowicz, W.9
Weiler, J.10
-
40
-
-
0141843656
-
The nuclear RNase III Drosha initiates microRNA processing
-
10.1038/nature01957, 14508493
-
Lee Y, Ahn C, Han J, Choi H, Kim J, Yim J, Lee J, Provost P, Rådmark O, Kim S, Kim VN. The nuclear RNase III Drosha initiates microRNA processing. Nature 2003, 425:415-419. 10.1038/nature01957, 14508493.
-
(2003)
Nature
, vol.425
, pp. 415-419
-
-
Lee, Y.1
Ahn, C.2
Han, J.3
Choi, H.4
Kim, J.5
Yim, J.6
Lee, J.7
Provost, P.8
Rådmark, O.9
Kim, S.10
Kim, V.N.11
-
41
-
-
24644490196
-
Elucidation of the small RNA component of the transcriptome
-
10.1126/science.1114112, 16141074
-
Lu C, Tej SS, Luo S, Haudenschild CD, Meyers BC, Green PJ. Elucidation of the small RNA component of the transcriptome. Science 2005, 309:1567-1569. 10.1126/science.1114112, 16141074.
-
(2005)
Science
, vol.309
, pp. 1567-1569
-
-
Lu, C.1
Tej, S.S.2
Luo, S.3
Haudenschild, C.D.4
Meyers, B.C.5
Green, P.J.6
-
42
-
-
34250877841
-
A mammalian microRNA expression atlas based on small RNA library sequencing
-
10.1016/j.cell.2007.04.040, 2681231, 17604727
-
Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foà R, Schliwka J, Fuchs U, Novosel A, Müller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M, Weir DB, Choksi R, De Vita G, Frezzetti D, Trompeter HI, Hornung V, Teng G, Hartmann G, Palkovits M, Di Lauro R, Wernet P, Macino G, Rogler CE, Nagle JW, Ju J, Papavasiliou FN, Benzing T, Lichter P, Tam W, Brownstein MJ, Bosio A, Borkhardt A, Russo JJ, Sander C, Zavolan M, Tuschl T. A mammalian microRNA expression atlas based on small RNA library sequencing. Cell 2007, 129:1401-1414. 10.1016/j.cell.2007.04.040, 2681231, 17604727.
-
(2007)
Cell
, vol.129
, pp. 1401-1414
-
-
Landgraf, P.1
Rusu, M.2
Sheridan, R.3
Sewer, A.4
Iovino, N.5
Aravin, A.6
Pfeffer, S.7
Rice, A.8
Kamphorst, A.O.9
Landthaler, M.10
Lin, C.11
Socci, N.D.12
Hermida, L.13
Fulci, V.14
Chiaretti, S.15
Foà, R.16
Schliwka, J.17
Fuchs, U.18
Novosel, A.19
Müller, R.U.20
Schermer, B.21
Bissels, U.22
Inman, J.23
Phan, Q.24
Chien, M.25
Weir, D.B.26
Choksi, R.27
De Vita, G.28
Frezzetti, D.29
Trompeter, H.I.30
Hornung, V.31
Teng, G.32
Hartmann, G.33
Palkovits, M.34
Di Lauro, R.35
Wernet, P.36
Macino, G.37
Rogler, C.E.38
Nagle, J.W.39
Ju, J.40
Papavasiliou, F.N.41
Benzing, T.42
Lichter, P.43
Tam, W.44
Brownstein, M.J.45
Bosio, A.46
Borkhardt, A.47
Russo, J.J.48
Sander, C.49
Zavolan, M.50
Tuschl, T.51
more..
-
43
-
-
31344441137
-
A single-molecule method for the quantitation of microRNA gene expression
-
10.1038/nmeth825, 16369552
-
Neely LA, Patel S, Garver J, Gallo M, Hackett M, McLaughlin S, Nadel M, Harris J, Gullans S, Rooke J. A single-molecule method for the quantitation of microRNA gene expression. Nat Methods 2006, 3:41-46. 10.1038/nmeth825, 16369552.
-
(2006)
Nat Methods
, vol.3
, pp. 41-46
-
-
Neely, L.A.1
Patel, S.2
Garver, J.3
Gallo, M.4
Hackett, M.5
McLaughlin, S.6
Nadel, M.7
Harris, J.8
Gullans, S.9
Rooke, J.10
-
44
-
-
53549106068
-
Deep sequencing of tomato short RNAs identifies microRNAs targeting genes involved in fruit ripening
-
10.1101/gr.080127.108, 2556272, 18653800
-
Moxon S, Jing R, Szittya G, Schwach F, Rusholme Pilcher RL, Moulton V, Dalmay T. Deep sequencing of tomato short RNAs identifies microRNAs targeting genes involved in fruit ripening. Genome Res 2008, 18:1602-1609. 10.1101/gr.080127.108, 2556272, 18653800.
-
(2008)
Genome Res
, vol.18
, pp. 1602-1609
-
-
Moxon, S.1
Jing, R.2
Szittya, G.3
Schwach, F.4
Rusholme Pilcher, R.L.5
Moulton, V.6
Dalmay, T.7
-
45
-
-
55049135859
-
MicroRNA discovery and profiling in human embryonic stem cells by deep sequencing of small RNA libraries
-
10.1634/stemcells.2008-0356, 2847579, 18583537
-
Bar M, Wyman SK, Fritz BR, Qi J, Garg KS, Parkin RK, Kroh EM, Bendoraite A, Mitchell PS, Nelson AM, Ruzzo WL, Ware C, Radich JP, Gentleman R, Ruohola-Baker H, Tewari M. MicroRNA discovery and profiling in human embryonic stem cells by deep sequencing of small RNA libraries. Stem Cells 2008, 26:2496-2505. 10.1634/stemcells.2008-0356, 2847579, 18583537.
-
(2008)
Stem Cells
, vol.26
, pp. 2496-2505
-
-
Bar, M.1
Wyman, S.K.2
Fritz, B.R.3
Qi, J.4
Garg, K.S.5
Parkin, R.K.6
Kroh, E.M.7
Bendoraite, A.8
Mitchell, P.S.9
Nelson, A.M.10
Ruzzo, W.L.11
Ware, C.12
Radich, J.P.13
Gentleman, R.14
Ruohola-Baker, H.15
Tewari, M.16
-
46
-
-
44849106063
-
A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
-
10.1101/gr.074740.107, 2413163, 18469162
-
Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML. A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach. Genome Res 2008, 18:957-964. 10.1101/gr.074740.107, 2413163, 18469162.
-
(2008)
Genome Res
, vol.18
, pp. 957-964
-
-
Glazov, E.A.1
Cottee, P.A.2
Barris, W.C.3
Moore, R.J.4
Dalrymple, B.P.5
Tizard, M.L.6
-
47
-
-
41649106136
-
Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells
-
10.1101/gr.7179508, 2279248, 18285502
-
Morin RD, O'Connor MD, Griffith M, Kuchenbauer F, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Eaves CJ, Marra MA. Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells. Genome Res 2008, 18:610-621. 10.1101/gr.7179508, 2279248, 18285502.
-
(2008)
Genome Res
, vol.18
, pp. 610-621
-
-
Morin, R.D.1
O'Connor, M.D.2
Griffith, M.3
Kuchenbauer, F.4
Delaney, A.5
Prabhu, A.L.6
Zhao, Y.7
McDonald, H.8
Zeng, T.9
Hirst, M.10
Eaves, C.J.11
Marra, M.A.12
-
48
-
-
41849084855
-
Discovering microRNAs from deep sequencing data using miRDeep
-
10.1038/nbt1394, 18392026
-
Friedländer MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N. Discovering microRNAs from deep sequencing data using miRDeep. Nat Biotechnol 2008, 26:407-415. 10.1038/nbt1394, 18392026.
-
(2008)
Nat Biotechnol
, vol.26
, pp. 407-415
-
-
Friedländer, M.R.1
Chen, W.2
Adamidi, C.3
Maaskola, J.4
Einspanier, R.5
Knespel, S.6
Rajewsky, N.7
-
49
-
-
84873516641
-
MiRBase: the microRNA database
-
miRBase: the microRNA database. , http://www.miRBase.org
-
-
-
-
50
-
-
34347376692
-
Characterization of microRNA expression profiles in normal human tissues
-
10.1186/1471-2164-8-166, 1904203, 17565689
-
Liang Y, Ridzon D, Wong L, Chen C. Characterization of microRNA expression profiles in normal human tissues. BMC Genomics 2007, 8:166. 10.1186/1471-2164-8-166, 1904203, 17565689.
-
(2007)
BMC Genomics
, vol.8
, pp. 166
-
-
Liang, Y.1
Ridzon, D.2
Wong, L.3
Chen, C.4
-
51
-
-
18744367544
-
Clustering and conservation patterns of human microRNAs
-
10.1093/nar/gki567, 1110742, 15891114
-
Altuvia Y, Landgraf P, Lithwick G, Elefant N, Pfeffer S, Aravin A, Brownstein MJ, Tuschl T, Margalit H. Clustering and conservation patterns of human microRNAs. Nucleic Acids Res 2005, 33:2697-2706. 10.1093/nar/gki567, 1110742, 15891114.
-
(2005)
Nucleic Acids Res
, vol.33
, pp. 2697-2706
-
-
Altuvia, Y.1
Landgraf, P.2
Lithwick, G.3
Elefant, N.4
Pfeffer, S.5
Aravin, A.6
Brownstein, M.J.7
Tuschl, T.8
Margalit, H.9
-
52
-
-
33748286897
-
Human microRNA clusters: genomic organization and expression profile in leukemia cell lines
-
10.1016/j.bbrc.2006.07.207, 16934749
-
Yu J, Wang F, Yang GH, Wang FL, Ma YN, Du ZW, Zhang JW. Human microRNA clusters: genomic organization and expression profile in leukemia cell lines. Biochem Biophys Res Commun 2006, 349:59-68. 10.1016/j.bbrc.2006.07.207, 16934749.
-
(2006)
Biochem Biophys Res Commun
, vol.349
, pp. 59-68
-
-
Yu, J.1
Wang, F.2
Yang, G.H.3
Wang, F.L.4
Ma, Y.N.5
Du, Z.W.6
Zhang, J.W.7
-
53
-
-
67749143728
-
Modulation of microRNA processing by p53
-
10.1038/nature08199, 19626115
-
Suzuki HI, Yamagata K, Sugimoto K, Iwamoto T, Kato S, Miyazono K. Modulation of microRNA processing by p53. Nature 2009, 460:529-533. 10.1038/nature08199, 19626115.
-
(2009)
Nature
, vol.460
, pp. 529-533
-
-
Suzuki, H.I.1
Yamagata, K.2
Sugimoto, K.3
Iwamoto, T.4
Kato, S.5
Miyazono, K.6
-
54
-
-
69249147045
-
Expression profiling of microRNAs by deep sequencing
-
10.1093/bib/bbp019, 19332473
-
Creighton CJ, Reid JG, Gunaratne PH. Expression profiling of microRNAs by deep sequencing. Brief Bioinform 2009, 10:490-497. 10.1093/bib/bbp019, 19332473.
-
(2009)
Brief Bioinform
, vol.10
, pp. 490-497
-
-
Creighton, C.J.1
Reid, J.G.2
Gunaratne, P.H.3
-
55
-
-
57149085481
-
Deep sequencing-based expression analysis shows major advances in robustness, resolution and inter-lab portability over five microarray platforms
-
10.1093/nar/gkn705, 2588528, 18927111
-
't Hoen PA, Ariyurek Y, Thygesen HH, Vreugdenhil E, Vossen RH, de Menezes RX, Boer JM, van Ommen GJ, den Dunnen JT. Deep sequencing-based expression analysis shows major advances in robustness, resolution and inter-lab portability over five microarray platforms. Nucleic Acids Res 2008, 36:e141. 10.1093/nar/gkn705, 2588528, 18927111.
-
(2008)
Nucleic Acids Res
, vol.36
-
-
't Hoen, P.A.1
Ariyurek, Y.2
Thygesen, H.H.3
Vreugdenhil, E.4
Vossen, R.H.5
de Menezes, R.X.6
Boer, J.M.7
van Ommen, G.J.8
den Dunnen, J.T.9
-
56
-
-
34848860582
-
Tissue-dependent paired expression of miRNAs
-
10.1093/nar/gkm641, 2034466, 17726050
-
Ro S, Park C, Young D, Sanders KM, Yan W. Tissue-dependent paired expression of miRNAs. Nucleic Acids Res 2007, 35:5944-5953. 10.1093/nar/gkm641, 2034466, 17726050.
-
(2007)
Nucleic Acids Res
, vol.35
, pp. 5944-5953
-
-
Ro, S.1
Park, C.2
Young, D.3
Sanders, K.M.4
Yan, W.5
-
57
-
-
20444460289
-
MicroRNA expression profiles classify human cancers
-
10.1038/nature03702, 15944708
-
Lu J, Getz G, Miska EA, Alvarez-Saavedra E, Lamb J, Peck D, Sweet-Cordero A, Ebert BL, Mak RH, Ferrando AA, Downing JR, Jacks T, Horvitz HR, Golub TR. MicroRNA expression profiles classify human cancers. Nature 2005, 435:834-838. 10.1038/nature03702, 15944708.
-
(2005)
Nature
, vol.435
, pp. 834-838
-
-
Lu, J.1
Getz, G.2
Miska, E.A.3
Alvarez-Saavedra, E.4
Lamb, J.5
Peck, D.6
Sweet-Cordero, A.7
Ebert, B.L.8
Mak, R.H.9
Ferrando, A.A.10
Downing, J.R.11
Jacks, T.12
Horvitz, H.R.13
Golub, T.R.14
-
58
-
-
33644866985
-
Hematopoietic-specific microRNA expression in human cells
-
10.1016/j.leukres.2005.09.001, 16226311
-
Ramkissoon SH, Mainwaring LA, Ogasawara Y, Keyvanfar K, McCoy JP, Sloand EM, Kajigaya S, Young NS. Hematopoietic-specific microRNA expression in human cells. Leuk Res 2006, 30:643-647. 10.1016/j.leukres.2005.09.001, 16226311.
-
(2006)
Leuk Res
, vol.30
, pp. 643-647
-
-
Ramkissoon, S.H.1
Mainwaring, L.A.2
Ogasawara, Y.3
Keyvanfar, K.4
McCoy, J.P.5
Sloand, E.M.6
Kajigaya, S.7
Young, N.S.8
-
59
-
-
57749114617
-
Down-regulation of hsa-miR-10a in chronic myeloid leukemia CD34+ cells increases USF2-mediated cell growth
-
10.1158/1541-7786.MCR-08-0167, 19074828
-
Agirre X, Jiménez-Velasco A, San José-Enériz E, Garate L, Bandrés E, Cordeu L, Aparicio O, Saez B, Navarro G, Vilas-Zornoza A, Pérez-Roger I, García-Foncillas J, Torres A, Heiniger A, Calasanz MJ, Fortes P, Román-Gómez J, Prósper F. Down-regulation of hsa-miR-10a in chronic myeloid leukemia CD34+ cells increases USF2-mediated cell growth. Mol Cancer Res 2008, 6:1830-1840. 10.1158/1541-7786.MCR-08-0167, 19074828.
-
(2008)
Mol Cancer Res
, vol.6
, pp. 1830-1840
-
-
Agirre, X.1
Jiménez-Velasco, A.2
San José-Enériz, E.3
Garate, L.4
Bandrés, E.5
Cordeu, L.6
Aparicio, O.7
Saez, B.8
Navarro, G.9
Vilas-Zornoza, A.10
Pérez-Roger, I.11
García-Foncillas, J.12
Torres, A.13
Heiniger, A.14
Calasanz, M.J.15
Fortes, P.16
Román-Gómez, J.17
Prósper, F.18
-
60
-
-
34248398096
-
Expression of the miR-17-92 polycistron in chronic myeloid leukemia (CML) CD34+ cells
-
10.1182/blood-2006-09-045104, 17284533
-
Venturini L, Battmer K, Castoldi M, Schultheis B, Hochhaus A, Muckenthaler MU, Ganser A, Eder M, Scherr M. Expression of the miR-17-92 polycistron in chronic myeloid leukemia (CML) CD34+ cells. Blood 2007, 109:4399-4405. 10.1182/blood-2006-09-045104, 17284533.
-
(2007)
Blood
, vol.109
, pp. 4399-4405
-
-
Venturini, L.1
Battmer, K.2
Castoldi, M.3
Schultheis, B.4
Hochhaus, A.5
Muckenthaler, M.U.6
Ganser, A.7
Eder, M.8
Scherr, M.9
-
61
-
-
51649111487
-
Differential expression of microRNAs in hematopoietic cell lineages
-
10.1111/j.1600-0609.2008.01111.x, 18573170
-
Merkerova M, Belickova M, Bruchova H. Differential expression of microRNAs in hematopoietic cell lineages. Eur J Haematol 2008, 81:304-310. 10.1111/j.1600-0609.2008.01111.x, 18573170.
-
(2008)
Eur J Haematol
, vol.81
, pp. 304-310
-
-
Merkerova, M.1
Belickova, M.2
Bruchova, H.3
-
62
-
-
84859367106
-
Genetics Home Reference
-
Genetics Home Reference. , http://ghr.nlm.nih.gov/chromosome=9
-
-
-
-
63
-
-
70350707749
-
Relative contribution of sequence and structure features to the mRNA binding of Argonaute/EIF2C-miRNA complexes and the degradation of miRNA targets
-
10.1101/gr.091181.109, 2775596, 19767416
-
Hausser J, Landthaler M, Jaskiewicz L, Gaidatzis D, Zavolan M. Relative contribution of sequence and structure features to the mRNA binding of Argonaute/EIF2C-miRNA complexes and the degradation of miRNA targets. Genome Res 2009, 19:2009-2020. 10.1101/gr.091181.109, 2775596, 19767416.
-
(2009)
Genome Res
, vol.19
, pp. 2009-2020
-
-
Hausser, J.1
Landthaler, M.2
Jaskiewicz, L.3
Gaidatzis, D.4
Zavolan, M.5
-
64
-
-
72949115517
-
Concordant regulation of translation and mRNA abundance for hundreds of targets of a human microRNA
-
10.1371/journal.pbio.1000238, 2766070, 19901979
-
Hendrickson DG, Hogan DJ, McCullough HL, Myers JW, Herschlag D, Ferrell JE, Brown PO. Concordant regulation of translation and mRNA abundance for hundreds of targets of a human microRNA. PLoS Biol 2009, 7:e1000238. 10.1371/journal.pbio.1000238, 2766070, 19901979.
-
(2009)
PLoS Biol
, vol.7
-
-
Hendrickson, D.G.1
Hogan, D.J.2
McCullough, H.L.3
Myers, J.W.4
Herschlag, D.5
Ferrell, J.E.6
Brown, P.O.7
-
65
-
-
58149186499
-
MiRecords: an integrated resource for microRNA-target interactions
-
10.1093/nar/gkn851, 2686554, 18996891, Database
-
Xiao F, Zuo Z, Cai G, Kang S, Gao X, Li T. miRecords: an integrated resource for microRNA-target interactions. Nucleic Acids Res 2009, (37 Database):D105-110. 10.1093/nar/gkn851, 2686554, 18996891.
-
(2009)
Nucleic Acids Res
, Issue.37
-
-
Xiao, F.1
Zuo, Z.2
Cai, G.3
Kang, S.4
Gao, X.5
Li, T.6
-
66
-
-
33745248430
-
MicroRNA target predictions in animals
-
Rajewsky N. microRNA target predictions in animals. Nat Genet 2009, 38(Suppl):S8-S13.
-
(2009)
Nat Genet
, vol.38
, Issue.SUPPL.
-
-
Rajewsky, N.1
-
67
-
-
0034954065
-
Inhibition of myeloid differentiation by Hoxa9, Hoxb8, and Meis homeobox genes
-
10.1016/S0301-472X(01)00655-5, 11438208
-
Fujino T, Yamazaki Y, Largaespada DA, Jenkins NA, Copeland NG, Hirokawa K, Nakamura T. Inhibition of myeloid differentiation by Hoxa9, Hoxb8, and Meis homeobox genes. Exp Hematol 2001, 29:856-863. 10.1016/S0301-472X(01)00655-5, 11438208.
-
(2001)
Exp Hematol
, vol.29
, pp. 856-863
-
-
Fujino, T.1
Yamazaki, Y.2
Largaespada, D.A.3
Jenkins, N.A.4
Copeland, N.G.5
Hirokawa, K.6
Nakamura, T.7
-
68
-
-
36549015198
-
Levels of Smad7 regulate Smad and mitogen activated kinases (MAPKs) signaling and controls erythroid and megakaryocytic differentiation of erythroleukemia cells
-
10.1080/09537100701549546, 18041647
-
Akel S, Bertolette D, Petrow-Sadowski C, Ruscetti FW. Levels of Smad7 regulate Smad and mitogen activated kinases (MAPKs) signaling and controls erythroid and megakaryocytic differentiation of erythroleukemia cells. Platelets 2007, 18:566-578. 10.1080/09537100701549546, 18041647.
-
(2007)
Platelets
, vol.18
, pp. 566-578
-
-
Akel, S.1
Bertolette, D.2
Petrow-Sadowski, C.3
Ruscetti, F.W.4
-
69
-
-
36549022557
-
Identification of genes with abnormal expression changes in acute myeloid leukemia
-
10.1002/gcc.20500, 17910043
-
Stirewalt DL, Meshinchi S, Kopecky KJ, Fan W, Pogosova-Agadjanyan EL, Engel JH, Cronk MR, Dorcy KS, McQuary AR, Hockenbery D, Wood B, Heimfeld S, Radich JP. Identification of genes with abnormal expression changes in acute myeloid leukemia. Genes Chromosomes Cancer 2008, 47:8-20. 10.1002/gcc.20500, 17910043.
-
(2008)
Genes Chromosomes Cancer
, vol.47
, pp. 8-20
-
-
Stirewalt, D.L.1
Meshinchi, S.2
Kopecky, K.J.3
Fan, W.4
Pogosova-Agadjanyan, E.L.5
Engel, J.H.6
Cronk, M.R.7
Dorcy, K.S.8
McQuary, A.R.9
Hockenbery, D.10
Wood, B.11
Heimfeld, S.12
Radich, J.P.13
-
70
-
-
34447097693
-
Intronic microRNA precursors that bypass Drosha processing
-
10.1038/nature05983, 2475599, 17589500
-
Ruby JG, Jan CH, Bartel DP. Intronic microRNA precursors that bypass Drosha processing. Nature 2007, 448:83-86. 10.1038/nature05983, 2475599, 17589500.
-
(2007)
Nature
, vol.448
, pp. 83-86
-
-
Ruby, J.G.1
Jan, C.H.2
Bartel, D.P.3
-
71
-
-
33947236349
-
Up-regulation of dicer, a component of the MicroRNA machinery, in prostate adenocarcinoma
-
10.2353/ajpath.2006.060480, 1780192, 17071602
-
Chiosea S, Jelezcova E, Chandran U, Acquafondata M, McHale T, Sobol RW, Dhir R. Up-regulation of dicer, a component of the MicroRNA machinery, in prostate adenocarcinoma. Am J Pathol 2006, 169:1812-1820. 10.2353/ajpath.2006.060480, 1780192, 17071602.
-
(2006)
Am J Pathol
, vol.169
, pp. 1812-1820
-
-
Chiosea, S.1
Jelezcova, E.2
Chandran, U.3
Acquafondata, M.4
McHale, T.5
Sobol, R.W.6
Dhir, R.7
-
72
-
-
13944260434
-
Microarray profiling of microRNAs reveals frequent coexpression with neighboring miRNAs and host genes
-
10.1261/rna.7240905, 1370713, 15701730
-
Baskerville S, Bartel DP. Microarray profiling of microRNAs reveals frequent coexpression with neighboring miRNAs and host genes. RNA 2005, 11:241-247. 10.1261/rna.7240905, 1370713, 15701730.
-
(2005)
RNA
, vol.11
, pp. 241-247
-
-
Baskerville, S.1
Bartel, D.P.2
-
73
-
-
75149175703
-
Prediction of novel miRNAs and associated target genes in Glycine max
-
10.1186/1471-2105-11-S1-S14, 20122185
-
Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G. Prediction of novel miRNAs and associated target genes in Glycine max. BMC Bioinformatics 2010, 11(Suppl 1):S14. 10.1186/1471-2105-11-S1-S14, 20122185.
-
(2010)
BMC Bioinformatics
, vol.11
, Issue.SUPPL. 1
-
-
Joshi, T.1
Yan, Z.2
Libault, M.3
Jeong, D.H.4
Park, S.5
Green, P.J.6
Sherrier, D.J.7
Farmer, A.8
May, G.9
Meyers, B.C.10
Xu, D.11
Stacey, G.12
-
74
-
-
10944254152
-
Transcription and processing of human microRNA precursors
-
10.1016/j.molcel.2004.12.002, 15610730
-
Cullen BR. Transcription and processing of human microRNA precursors. Mol Cell 2004, 16:861-865. 10.1016/j.molcel.2004.12.002, 15610730.
-
(2004)
Mol Cell
, vol.16
, pp. 861-865
-
-
Cullen, B.R.1
-
75
-
-
0037772254
-
The time of appearance of the C. elegans let-7 microRNA is transcriptionally controlled utilizing a temporal regulatory element in its promoter
-
10.1016/S0012-1606(03)00202-1, 12871707
-
Johnson SM, Lin SY, Slack FJ. The time of appearance of the C. elegans let-7 microRNA is transcriptionally controlled utilizing a temporal regulatory element in its promoter. Dev Biol 2003, 259:364-379. 10.1016/S0012-1606(03)00202-1, 12871707.
-
(2003)
Dev Biol
, vol.259
, pp. 364-379
-
-
Johnson, S.M.1
Lin, S.Y.2
Slack, F.J.3
-
76
-
-
33745623128
-
Post-transcriptional regulation of microRNA expression
-
10.1261/rna.2322506, 1484437, 16738409
-
Obernosterer G, Leuschner PJ, Alenius M, Martinez J. Post-transcriptional regulation of microRNA expression. RNA 2006, 12:1161-1167. 10.1261/rna.2322506, 1484437, 16738409.
-
(2006)
RNA
, vol.12
, pp. 1161-1167
-
-
Obernosterer, G.1
Leuschner, P.J.2
Alenius, M.3
Martinez, J.4
-
77
-
-
38349169664
-
Mechanisms of post-transcriptional regulation by microRNAs: are the answers in sight?
-
10.1038/nrg2290, 18197166
-
Filipowicz W, Bhattacharyya SN, Sonenberg N. Mechanisms of post-transcriptional regulation by microRNAs: are the answers in sight?. Nat Rev Genet 2008, 9:102-114. 10.1038/nrg2290, 18197166.
-
(2008)
Nat Rev Genet
, vol.9
, pp. 102-114
-
-
Filipowicz, W.1
Bhattacharyya, S.N.2
Sonenberg, N.3
-
78
-
-
57749099102
-
P53-Responsive micrornas 192 and 215 are capable of inducing cell cycle arrest
-
10.1158/0008-5472.CAN-08-1569, 2836584, 19074875
-
Braun CJ, Zhang X, Savelyeva I, Wolff S, Moll UM, Schepeler T, Ørntoft TF, Andersen CL, Dobbelstein M. p53-Responsive micrornas 192 and 215 are capable of inducing cell cycle arrest. Cancer Res 2008, 68:10094-10104. 10.1158/0008-5472.CAN-08-1569, 2836584, 19074875.
-
(2008)
Cancer Res
, vol.68
, pp. 10094-10104
-
-
Braun, C.J.1
Zhang, X.2
Savelyeva, I.3
Wolff, S.4
Moll, U.M.5
Schepeler, T.6
Ørntoft, T.F.7
Andersen, C.L.8
Dobbelstein, M.9
-
79
-
-
55749099505
-
Distinct microRNA expression profiles in acute myeloid leukemia with common translocations
-
10.1073/pnas.0808266105, 2563085, 18832181
-
Li Z, Lu J, Sun M, Mi S, Zhang H, Luo RT, Chen P, Wang Y, Yan M, Qian Z, Neilly MB, Jin J, Zhang Y, Bohlander SK, Zhang DE, Larson RA, Le Beau MM, Thirman MJ, Golub TR, Rowley JD, Chen J. Distinct microRNA expression profiles in acute myeloid leukemia with common translocations. Proc Natl Acad Sci USA 2008, 105:15535-15540. 10.1073/pnas.0808266105, 2563085, 18832181.
-
(2008)
Proc Natl Acad Sci USA
, vol.105
, pp. 15535-15540
-
-
Li, Z.1
Lu, J.2
Sun, M.3
Mi, S.4
Zhang, H.5
Luo, R.T.6
Chen, P.7
Wang, Y.8
Yan, M.9
Qian, Z.10
Neilly, M.B.11
Jin, J.12
Zhang, Y.13
Bohlander, S.K.14
Zhang, D.E.15
Larson, R.A.16
Le Beau, M.M.17
Thirman, M.J.18
Golub, T.R.19
Rowley, J.D.20
Chen, J.21
more..
-
80
-
-
58649107855
-
MicroRNA and cancer--focus on apoptosis
-
10.1111/j.1582-4934.2008.00510.x, 19175697
-
Wang Y, Lee CG. MicroRNA and cancer--focus on apoptosis. J Cell Mol Med 2009, 13:12-23. 10.1111/j.1582-4934.2008.00510.x, 19175697.
-
(2009)
J Cell Mol Med
, vol.13
, pp. 12-23
-
-
Wang, Y.1
Lee, C.G.2
-
81
-
-
66049138420
-
Functional profiling reveals critical role for miRNA in differentiation of human mesenchymal stem cells
-
10.1371/journal.pone.0005605, 2680014, 19440384
-
Schoolmeesters A, Eklund T, Leake D, Vermeulen A, Smith Q, Force Aldred S, Fedorov Y. Functional profiling reveals critical role for miRNA in differentiation of human mesenchymal stem cells. PLoS One 2009, 4:e5605. 10.1371/journal.pone.0005605, 2680014, 19440384.
-
(2009)
PLoS One
, vol.4
-
-
Schoolmeesters, A.1
Eklund, T.2
Leake, D.3
Vermeulen, A.4
Smith, Q.5
Force Aldred, S.6
Fedorov, Y.7
-
82
-
-
33644779735
-
The microRNA miR-181 targets the homeobox protein Hox-A11 during mammalian myoblast differentiation
-
10.1038/ncb1373, 16489342
-
Naguibneva I, Ameyar-Zazoua M, Polesskaya A, Ait-Si-Ali S, Groisman R, Souidi M, Cuvellier S, Harel-Bellan A. The microRNA miR-181 targets the homeobox protein Hox-A11 during mammalian myoblast differentiation. Nat Cell Biol 2006, 8:278-284. 10.1038/ncb1373, 16489342.
-
(2006)
Nat Cell Biol
, vol.8
, pp. 278-284
-
-
Naguibneva, I.1
Ameyar-Zazoua, M.2
Polesskaya, A.3
Ait-Si-Ali, S.4
Groisman, R.5
Souidi, M.6
Cuvellier, S.7
Harel-Bellan, A.8
-
83
-
-
67349240823
-
A new molecular network comprising PU.1, interferon regulatory factor proteins and miR-342 stimulates ATRA-mediated granulocytic differentiation of acute promyelocytic leukemia cells
-
10.1038/leu.2008.372, 19151778
-
De Marchis ML, Ballarino M, Salvatori B, Puzzolo MC, Bozzoni I, Fatica A. A new molecular network comprising PU.1, interferon regulatory factor proteins and miR-342 stimulates ATRA-mediated granulocytic differentiation of acute promyelocytic leukemia cells. Leukemia 2009, 23:856-862. 10.1038/leu.2008.372, 19151778.
-
(2009)
Leukemia
, vol.23
, pp. 856-862
-
-
De Marchis, M.L.1
Ballarino, M.2
Salvatori, B.3
Puzzolo, M.C.4
Bozzoni, I.5
Fatica, A.6
-
84
-
-
66149157349
-
MiR-24-mediated downregulation of H2AX suppresses DNA repair in terminally differentiated blood cells
-
10.1038/nsmb.1589, 2853019, 19377482
-
Lal A, Pan Y, Navarro F, Dykxhoorn DM, Moreau L, Meire E, Bentwich Z, Lieberman J, Chowdhury D. miR-24-mediated downregulation of H2AX suppresses DNA repair in terminally differentiated blood cells. Nat Struct Mol Biol 2009, 16:492-498. 10.1038/nsmb.1589, 2853019, 19377482.
-
(2009)
Nat Struct Mol Biol
, vol.16
, pp. 492-498
-
-
Lal, A.1
Pan, Y.2
Navarro, F.3
Dykxhoorn, D.M.4
Moreau, L.5
Meire, E.6
Bentwich, Z.7
Lieberman, J.8
Chowdhury, D.9
-
85
-
-
59149091637
-
MicroRNA regulation of DNA repair gene expression in hypoxic stress
-
10.1158/0008-5472.CAN-08-2516, 19141645
-
Crosby ME, Kulshreshtha R, Ivan M, Glazer PM. MicroRNA regulation of DNA repair gene expression in hypoxic stress. Cancer Res 2009, 69:1221-1229. 10.1158/0008-5472.CAN-08-2516, 19141645.
-
(2009)
Cancer Res
, vol.69
, pp. 1221-1229
-
-
Crosby, M.E.1
Kulshreshtha, R.2
Ivan, M.3
Glazer, P.M.4
-
86
-
-
60549090858
-
Breast cancer metastasis suppressor 1 up-regulates miR-146, which suppresses breast cancer metastasis
-
10.1158/0008-5472.CAN-08-3559, 2754225, 19190326
-
Hurst DR, Edmonds MD, Scott GK, Benz CC, Vaidya KS, Welch DR. Breast cancer metastasis suppressor 1 up-regulates miR-146, which suppresses breast cancer metastasis. Cancer Res 2009, 69:1279-1283. 10.1158/0008-5472.CAN-08-3559, 2754225, 19190326.
-
(2009)
Cancer Res
, vol.69
, pp. 1279-1283
-
-
Hurst, D.R.1
Edmonds, M.D.2
Scott, G.K.3
Benz, C.C.4
Vaidya, K.S.5
Welch, D.R.6
-
87
-
-
33947286842
-
MicroRNA expression profiling during human cord blood-derived CD34 cell erythropoiesis
-
10.1016/j.exphem.2006.12.002, 17379065
-
Choong ML, Yang HH, McNiece I. MicroRNA expression profiling during human cord blood-derived CD34 cell erythropoiesis. Exp Hematol 2007, 35:551-564. 10.1016/j.exphem.2006.12.002, 17379065.
-
(2007)
Exp Hematol
, vol.35
, pp. 551-564
-
-
Choong, M.L.1
Yang, H.H.2
McNiece, I.3
-
88
-
-
38349146518
-
MicroRNA miR-24 inhibits erythropoiesis by targeting activin type I receptor ALK4
-
10.1182/blood-2007-05-092718, 17906079
-
Wang Q, Huang Z, Xue H, Jin C, Ju XL, Han JD, Chen YG. MicroRNA miR-24 inhibits erythropoiesis by targeting activin type I receptor ALK4. Blood 2008, 111:588-595. 10.1182/blood-2007-05-092718, 17906079.
-
(2008)
Blood
, vol.111
, pp. 588-595
-
-
Wang, Q.1
Huang, Z.2
Xue, H.3
Jin, C.4
Ju, X.L.5
Han, J.D.6
Chen, Y.G.7
-
89
-
-
0346727524
-
MicroRNAs modulate hematopoietic lineage differentiation
-
10.1126/science.1091903, 14657504
-
Chen CZ, Li L, Lodish HF, Bartel DP. MicroRNAs modulate hematopoietic lineage differentiation. Science 2004, 303:83-86. 10.1126/science.1091903, 14657504.
-
(2004)
Science
, vol.303
, pp. 83-86
-
-
Chen, C.Z.1
Li, L.2
Lodish, H.F.3
Bartel, D.P.4
-
90
-
-
14344257055
-
MicroRNAs as regulators of mammalian hematopoiesis
-
10.1016/j.smim.2005.01.001, 15737576
-
Chen CZ, Lodish HF. MicroRNAs as regulators of mammalian hematopoiesis. Semin Immunol 2005, 17:155-165. 10.1016/j.smim.2005.01.001, 15737576.
-
(2005)
Semin Immunol
, vol.17
, pp. 155-165
-
-
Chen, C.Z.1
Lodish, H.F.2
-
91
-
-
38349016948
-
MiRNA profiling of naïve, effector and memory CD8 T cells
-
10.1371/journal.pone.0001020, 2000354, 17925868
-
Wu H, Neilson JR, Kumar P, Manocha M, Shankar P, Sharp PA, Manjunath N. miRNA profiling of naïve, effector and memory CD8 T cells. PLoS One 2007, 2:e1020. 10.1371/journal.pone.0001020, 2000354, 17925868.
-
(2007)
PLoS One
, vol.2
-
-
Wu, H.1
Neilson, J.R.2
Kumar, P.3
Manocha, M.4
Shankar, P.5
Sharp, P.A.6
Manjunath, N.7
-
92
-
-
33750499991
-
A role for Dicer in immune regulation
-
10.1084/jem.20061692, 2118134, 17060477
-
Cobb BS, Hertweck A, Smith J, O'Connor E, Graf D, Cook T, Smale ST, Sakaguchi S, Livesey FJ, Fisher AG, Merkenschlager M. A role for Dicer in immune regulation. J Exp Med 2006, 203:2519-2527. 10.1084/jem.20061692, 2118134, 17060477.
-
(2006)
J Exp Med
, vol.203
, pp. 2519-2527
-
-
Cobb, B.S.1
Hertweck, A.2
Smith, J.3
O'Connor, E.4
Graf, D.5
Cook, T.6
Smale, S.T.7
Sakaguchi, S.8
Livesey, F.J.9
Fisher, A.G.10
Merkenschlager, M.11
-
93
-
-
33144460031
-
Beyond the cell cycle: a new role for Cdk6 in differentiation
-
10.1002/jcb.20712, 16294322
-
Grossel MJ, Hinds PW. Beyond the cell cycle: a new role for Cdk6 in differentiation. J Cell Biochem 2006, 97:485-493. 10.1002/jcb.20712, 16294322.
-
(2006)
J Cell Biochem
, vol.97
, pp. 485-493
-
-
Grossel, M.J.1
Hinds, P.W.2
-
94
-
-
33748884332
-
Expression of leukemia inhibitory factor and its receptors is increased during differentiation of human embryonic stem cells
-
10.1016/j.fertnstert.2005.12.081, 16949591
-
Aghajanova L, Skottman H, Strömberg AM, Inzunza J, Lahesmaa R, Hovatta O. Expression of leukemia inhibitory factor and its receptors is increased during differentiation of human embryonic stem cells. Fertil Steril 2006, 86:1193-1209. 10.1016/j.fertnstert.2005.12.081, 16949591.
-
(2006)
Fertil Steril
, vol.86
, pp. 1193-1209
-
-
Aghajanova, L.1
Skottman, H.2
Strömberg, A.M.3
Inzunza, J.4
Lahesmaa, R.5
Hovatta, O.6
-
95
-
-
61549096257
-
Proviral integration site for Moloney murine leukemia virus 1, but not phosphatidylinositol-3 kinase, is essential in the antiapoptotic signaling cascade initiated by IL-5 in eosinophils
-
10.1016/j.jaci.2008.12.004, 19152965
-
Andina N, Didichenko S, Schmidt-Mende J, Dahinden CA, Simon HU. Proviral integration site for Moloney murine leukemia virus 1, but not phosphatidylinositol-3 kinase, is essential in the antiapoptotic signaling cascade initiated by IL-5 in eosinophils. J Allergy Clin Immunol 2009, 123:603-611. 10.1016/j.jaci.2008.12.004, 19152965.
-
(2009)
J Allergy Clin Immunol
, vol.123
, pp. 603-611
-
-
Andina, N.1
Didichenko, S.2
Schmidt-Mende, J.3
Dahinden, C.A.4
Simon, H.U.5
-
96
-
-
12344282813
-
Gene expression regulation and domain function of hematopoietic GATA factors
-
10.1016/j.semcdb.2004.11.001, 15659347
-
Shimizu R, Yamamoto M. Gene expression regulation and domain function of hematopoietic GATA factors. Semin Cell Dev Biol 2005, 16:129-136. 10.1016/j.semcdb.2004.11.001, 15659347.
-
(2005)
Semin Cell Dev Biol
, vol.16
, pp. 129-136
-
-
Shimizu, R.1
Yamamoto, M.2
-
97
-
-
67649834041
-
LSD1-mediated epigenetic modification is required for TAL1 function and hematopoiesis
-
10.1073/pnas.0900437106, 2700898, 19497860
-
Hu X, Li X, Valverde K, Fu X, Noguchi C, Qiu Y, Huang S. LSD1-mediated epigenetic modification is required for TAL1 function and hematopoiesis. Proc Natl Acad Sci USA 2009, 106:10141-10146. 10.1073/pnas.0900437106, 2700898, 19497860.
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, pp. 10141-10146
-
-
Hu, X.1
Li, X.2
Valverde, K.3
Fu, X.4
Noguchi, C.5
Qiu, Y.6
Huang, S.7
-
98
-
-
22844440427
-
Identification of hundreds of conserved and nonconserved human microRNAs
-
10.1038/ng1590, 15965474
-
Bentwich I, Avniel A, Karov Y, Aharonov R, Gilad S, Barad O, Barzilai A, Einat P, Einav U, Meiri E, Sharon E, Spector Y, Bentwich Z. Identification of hundreds of conserved and nonconserved human microRNAs. Nature Genetics 2005, 37:766-770. 10.1038/ng1590, 15965474.
-
(2005)
Nature Genetics
, vol.37
, pp. 766-770
-
-
Bentwich, I.1
Avniel, A.2
Karov, Y.3
Aharonov, R.4
Gilad, S.5
Barad, O.6
Barzilai, A.7
Einat, P.8
Einav, U.9
Meiri, E.10
Sharon, E.11
Spector, Y.12
Bentwich, Z.13
-
99
-
-
45449113138
-
CID-miRNA: a web server for prediction of novel miRNA precursors in human genome
-
10.1016/j.bbrc.2008.05.134, 18522801
-
Tyagi S, Vaz C, Gupta V, Bhatia R, Maheshwari S, Srinivasan A, Bhattacharya A. CID-miRNA: a web server for prediction of novel miRNA precursors in human genome. Biochem Biophys Res Commun 2008, 372:831-834. 10.1016/j.bbrc.2008.05.134, 18522801.
-
(2008)
Biochem Biophys Res Commun
, vol.372
, pp. 831-834
-
-
Tyagi, S.1
Vaz, C.2
Gupta, V.3
Bhatia, R.4
Maheshwari, S.5
Srinivasan, A.6
Bhattacharya, A.7
-
100
-
-
75149197426
-
Prediction of novel precursor miRNAs using a context-sensitive hidden Markov Model (CSHMM)
-
10.1186/1471-2105-11-S1-S29, 20122201
-
Agarwal S, Vaz C, Bhattacharya A, Srinivasan A. Prediction of novel precursor miRNAs using a context-sensitive hidden Markov Model (CSHMM). BMC Bioinformatics 2010, 11(Suppl 1):S29. 10.1186/1471-2105-11-S1-S29, 20122201.
-
(2010)
BMC Bioinformatics
, vol.11
, Issue.SUPPL. 1
-
-
Agarwal, S.1
Vaz, C.2
Bhattacharya, A.3
Srinivasan, A.4
-
101
-
-
34547596338
-
MiPred: classification of real and pseudo microRNA precursors using random forest prediction model with combined features
-
10.1093/nar/gkm368, 1933124, 17553836, Web Server
-
Jiang P, Wu H, Wang W, Ma W, Sun X, Lu Z. MiPred: classification of real and pseudo microRNA precursors using random forest prediction model with combined features. Nucleic Acids Res 2007, (35 Web Server):W339-344. 10.1093/nar/gkm368, 1933124, 17553836.
-
(2007)
Nucleic Acids Res
, Issue.35
-
-
Jiang, P.1
Wu, H.2
Wang, W.3
Ma, W.4
Sun, X.5
Lu, Z.6
|