Mouse Dfa is a repressor of TATA-box promoters and interacts with the Abt1 activator of basal transcription

Journal of Biological Chemistry

Volumn 285, Issue 22, 2010, Pages 17218-17234

  Brower, Christopher S ^a   Veiga, Lucia ^a,b   Jones, Richard H ^a,c   Varshavsky, Alexander ^a  

^a CALIFORNIA INSTITUTE OF TECHNOLOGY   (United States)

^b Universidad de la Republica Instituto de Higiene   (Uruguay)

^c STANFORD UNIVERSITY SCHOOL OF MEDICINE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BASAL TRANSCRIPTION; BINDING PROTEINS; CELL LINES; LUCIFERASE REPORTER ASSAYS; PHYSIOLOGICAL FUNCTIONS; PRE-MRNA; RNA INTERFERENCE; TATA-BINDING PROTEINS;

CELL CULTURE; PLANTS (BOTANY); PROTEINS; RNA;

TRANSCRIPTION;

BINDING PROTEIN; DIVERGENT FROM ATE1 PROTEIN; PROTEIN ABT1; TATA BINDING PROTEIN; TRANSCRIPTION FACTOR; UNCLASSIFIED DRUG;

ANIMAL CELL; ARTICLE; CONTROLLED STUDY; GENE REPRESSION; MALE; MOUSE; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROMOTER REGION; PROTEIN BINDING; PROTEIN FUNCTION; PROTEIN PROTEIN INTERACTION; RNA INTERFERENCE; RNA SPLICING; TESTIS; TRANSCRIPTION INITIATION;

AMINO ACID SEQUENCE; AMINOACYLTRANSFERASES; ANIMALS; BASE SEQUENCE; CHROMATIN; GENE EXPRESSION REGULATION; HUMANS; MALE; MICE; MOLECULAR SEQUENCE DATA; NUCLEAR PROTEINS; PROMOTER REGIONS, GENETIC; REPRESSOR PROTEINS; SEQUENCE HOMOLOGY, AMINO ACID; TATA BOX; TATA-BOX BINDING PROTEIN; TESTIS; TRANSCRIPTION FACTORS, GENERAL;

EID: 77952747084     PISSN: 00219258     EISSN: 1083351X     Source Type: Journal    
DOI: 10.1074/jbc.M110.118638     Document Type: Article

References (55)

1. Varshavsky, A. (1996) Proc. Natl. Acad. Sci. U.S.A. 93, 12142-12149
2. Mogk, A., Schmidt, R., and Bukau, B. (2007) Trends Cell Biol. 17, 165-172
3. Tasaki, T., and Kwon, Y. T. (2007) Trends Biochem. Sci. 32, 520-528
4. Varshavsky, A. (2008) Nat. Struct. Mol. Biol. 15, 1238-1240
5. Varshavsky, A. (2008) J. Biol. Chem. 283, 34469-34489
6. Hu, R. G., Sheng, J., Qi, X., Xu, Z., Takahashi, T. T., and Varshavsky, A. (2005) Nature 437, 981-986
7. Hu, R. G., Wang, H., Xia, Z., and Varshavsky, A. (2008) Proc. Natl. Acad. Sci. U.S.A. 105, 76-81
8. Xia, Z., Webster, A., Du, F., Piatkov, K., Ghislain, M., and Varshavsky, A. (2008) J. Biol. Chem. 283, 24011-24028
9. Hwang, C. S., and Varshavsky, A. (2008) Proc. Natl. Acad. Sci. U.S.A. 105, 19188-19193
10. Hwang, C. S., Shemorry, A., and Varshavsky, A. (2009) Proc. Natl. Acad. Sci. U.S.A. 106, 2142-2147
11. Wang, H., Piatkov, K. I., Brower, C. S., and Varshavsky, A. (2009) Mol. Cell 34, 686-695
12. Brower, C. S., and Varshavsky, A. (2009) PLoS ONE 4, e7757
13. Hwang, C. S., Shemorry, A., and Varshavsky, A. (2010) Science 327, 973-977
14. Hu, R. G., Brower, C. S., Wang, H., Davydov, I. V., Sheng, J., Zhou, J., Kwon, Y. T., and Varshavsky, A. (2006) J. Biol. Chem. 281, 32559-32573
15. Kwon, Y. T., Kashina, A. S., and Varshavsky, A. (1999) Mol. Cell. Biol. 19, 182-193
16. Kwon, Y. T., Kashina, A. S., Davydov, I. V., Hu, R. G., An, J. Y., Seo, J. W., Du, F., and Varshavsky, A. (2002) Science 297, 96-99
17. Lee, M. J., Tasaki, T., Moroi, K., An, J. Y., Kimura, S., Davydov, I. V., and Kwon, Y. T. (2005) Proc. Natl. Acad. Sci. U.S.A. 102, 15030-15035
18. Varshavsky, A. (2004) Curr. Biol. 14, R181-R183
19. Graciet, E., Hu, R. G., Piatkov, K., Rhee, J. H., Schwarz, E. M., and Varshavsky, A. (2006) Proc. Natl. Acad. Sci. U.S.A. 103, 3078-3083
20. Shin, K. J., Wall, E. A., Zavzavadjian, J. R., Santat, L. A., Liu, J., Hwang, J. I., Rebres, R., Roach, T., Seaman, W., Simon, M. I., and Fraser, I. D. (2006) Proc. Natl. Acad. Sci. U.S.A. 103, 13759-13764
21. Prioleau, M. N. (2009) PLoS Genetics 5, e1000454
22. Patton, J., Block, S., Coombs, C., and Martin, M. E. (2006) Gene 369, 35-44
23. Emoto, M., Miki, M., Sarker, A. H., Nakamura, T., Seki, Y., Seki, S., and Ikeda, S. (2005) Gene 357, 47-54
24. Travers, M. T., Cambot, M., Kennedy, H. T., Lenoir, G. M., Barber, M. C., and Joulin, V. (2005) Genomics 85, 71-84
25. Saleh, A., Davies, G. E., Pascal, V., Wright, P. W., Hodge, D. L., Cho, E. H., Lockett, S. J., Abshari, M., and Anderson, S. K. (2004) Immunity 21, 55-66
26. Meier-Noorden, M., Flindt, S., Kalinke, U., and Hinz, T. (2004) Gene 338, 197-207
27. Whitehouse, C., Chambers, J., Catteau, A., and Solomon, E. (2004) Gene 326, 87-96
28. Trinklein, N. D., Aldred, S. F., Hartman, S. J., Schroeder, D. I., Otillar, R. P., and Myers, R. M. (2004) Genome Res. 14, 62-66
29. Takai, D., and Jones, P. A. (2004) Mol. Biol. Evol. 21, 463-467
30. Adachi, N., and Lieber, M. R. (2002) Cell 109, 807-809
31. West, A. B., Lockhart, P. J.,O'Farell, C., and Farrer, M. J. (2003) J. Mol. Biol. 326, 11-19
32. Li, Y. Y., Yu, H., Guo, Z. M., Guo, T. Q., Tu, K., and Li, Y. X. (2006) PLoS Comp. Biol. 2, e74
33. Seila, A. C., Calabrese, J. M., Levine, S. S., Yeo, G. W., Rahl, P. B., Flynn, R. A., Young, R. A., and Sharp, P. A. (2008) Science 322, 1849-1851
34. He, Y., Vogelstein, B., Velculescu, V. E., Papadopoulos, N., and Kinzler, K. W. (2008) Science 322, 1855-1857
35. Piontkivska, H., Yang, M. Q., Larkin, D. M., Lewin, H. A., Reecy, J., and Elnitski, L. (2009) BMC Genomics 10, 189
36. Xu, Z., Wei, W., Gagneur, J., Perocchi, F., Clauder-Münster, S., Camblong, J., Guffanti, E., Stutz, F., Huber, W., and Steinmetz, L. M. (2009) Nature 457, 1033-1037
37. Teodorovic, S., Walls, C. D., and Elmendorf, H. G. (2007) Nucleic Acids Res. 35, 2544-2553
38. Ausubel, F. M., Brent, R., Kingston, R. E., Moore, D. D., Smith, J. A., Seidman, J. G., and Struhl, K. (eds) (2006) Current Protocols in Molecular Biology, Wiley-Interscience, New York
39. Chen, M., and Manley, J. L. (2009) Nat. Rev. Mol. Cell Biol. 10, 741-754
40. Elnitski, L., Riemer, C., Burhans, R., Hardison, R., and Miller, W. (2005) Curr. Protoc. Bioinformatics, Unit 10.14
41. Elnitski, L., Riemer, C., Schwartz, S., Hardison, R., and Miller, W. (2003) Curr. Protoc. Bioinformatics, Unit 10.12
42. Scherf, M., Klingenhoff, A., and Werner, T. (2000) J. Mol. Biol. 297, 599-606
43. Coriton, O., Lepourcelet, M., Hampe, A., Galibert, F., and Mosser, J. (2000) Mamm. Genome 11, 1127-1131
44. Lepourcelet, M., Coriton, O., Hampe, A., Galibert, F., and Mosser, J. (1998) Immunogenetics 47, 491-496
45. Seibel, N. M., Eljouni, J., Nalaskowski, M. M., and Hampe, W. (2007) Anal. Biochem. 368, 95-99
46. Saitoh, N., Spahr, C. S., Patterson, S. D., Bubulya, P., Neuwald, A. F., and Spector, D. L. (2004) Mol. Biol. Cell 15, 3876-3890
47. Bregman, D. B., Du, L., van der Zee, S., and Warren, S. L. (1995) J. Cell Biol. 129, 287-298
48. Lamond, A. I., and Spector, D. L. (2003) Nat. Rev. Mol. Cell Biol. 4, 605-612
49. Wang, I. F., Chang, H. Y., and Shen, C. K. (2006) Exp. Cell Res. 312, 3796-3807
50. Zhang, J., Wang, Y., Zhou, Y., Cao, Z., Huang, P., and Lu, B. (2005) FEBS Lett. 579, 559-566
51. Zhou, Y., Zhao, Q., Bishop, C. E., Huang, P., and Lu, B. (2005) Mol. Reprod. Dev. 70, 301-307
52. Lu, B., and Bishop, C. E. (2003) J. Biol. Chem. 278, 16289-16296
53. Agoulnik, A. I., Lu, B., Zhu, Q., Truong, C., Ty, M. T., Arango, N., Chada, K. K., and Bishop, C. E. (2002) Hum. Mol. Genet. 11, 3047-3053
54. Aihara, T., Nakamura, N., Honda, S., and Hirose, S. (2009) Biol. Reprod. 80, 762-770
55. Oda, T., Kayukawa, K., Hagiwara, H., Yudate, H. T., Masuho, Y., Murakami, Y., Tamura, T. A., and Muramatsu, M. A. (2000) Mol. Cell. Biol. 20, 1407-1418