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Volumn 5, Issue 9, 2009, Pages 1415-1428

Challenges in defining predictive markers for response to endocrine therapy in breast cancer

Author keywords

Aromatase inhibitors; Breast cancer; Endocrine therapy; Genetic signatures; Letrozole; Neoadjuvant; Predictive indices

Indexed keywords

ANASTROZOLE; AROMATASE INHIBITOR; CD36 ANTIGEN; CYCLIN B1; CYCLIN D1; ESTROGEN RECEPTOR; GELATINASE A; INSULIN RECEPTOR SUBSTRATE 1; KI 67 ANTIGEN; LETROZOLE; MICRORNA; PROGESTERONE RECEPTOR; PROTEIN PS2; TAMOXIFEN; HORMONE ANTAGONIST; TUMOR MARKER;

EID: 74949101730     PISSN: 14796694     EISSN: 17448301     Source Type: Journal    
DOI: 10.2217/fon.09.113     Document Type: Review
Times cited : (26)

References (91)
  • 1
    • 50549123220 scopus 로고
    • On the treatment of inoperable cases of carcinoma of the mamma: Suggestions for a new method of treatment, with illustrative cases
    • Beatson GT: On the treatment of inoperable cases of carcinoma of the mamma: suggestions for a new method of treatment, with illustrative cases. Lancet 2, 104-107 (1896).
    • (1896) Lancet , vol.2 , pp. 104-107
    • Beatson, G.T.1
  • 2
    • 69249137029 scopus 로고    scopus 로고
    • Biological determinants of endocrine resistance in breast cancer
    • Musgrove EA, Sutherland RL: Biological determinants of endocrine resistance in breast cancer. Nat. Rev. Cancer 9, 631-643 (2009).
    • (2009) Nat. Rev. Cancer , vol.9 , pp. 631-643
    • Musgrove, E.A.1    Sutherland, R.L.2
  • 3
    • 0023519279 scopus 로고
    • The importance of local synthesis of estrogen within the breast
    • Miller WR, O'Neill J: The importance of local synthesis of estrogen within the breast. Steroids 50(4-6), 537-548 (1987).
    • (1987) Steroids , vol.50 , Issue.4-6 , pp. 537-548
    • Miller, W.R.1    O'Neill, J.2
  • 5
    • 0008552679 scopus 로고    scopus 로고
    • Prediction of estrogen sensitivity/dependence
    • Miller WR Ed, R.G. Landes Co, TX, USA
    • Miller WR: Prediction of estrogen sensitivity/dependence. In: Estrogen and breast cancer. Miller WR (Ed.). R.G. Landes Co., TX, USA, 151-170 (1996).
    • (1996) Estrogen and breast cancer , pp. 151-170
    • Miller, W.R.1
  • 6
    • 45249092092 scopus 로고    scopus 로고
    • Prospects of neoadjuvant aromatase inhibitor therapy in breast cancer
    • Dixon JM: Prospects of neoadjuvant aromatase inhibitor therapy in breast cancer. Expert Rev. Anticancer Ther. 8(3), 453-463 (2008).
    • (2008) Expert Rev. Anticancer Ther , vol.8 , Issue.3 , pp. 453-463
    • Dixon, J.M.1
  • 7
    • 37349009057 scopus 로고    scopus 로고
    • Recommendations from an international expert panel on the use of neoadjuvant (primary) systemic treatment of operable breast cancer: New perspectives 2006
    • Kaufmann M, von Minckwitz G, Bear HD et al.: Recommendations from an international expert panel on the use of neoadjuvant (primary) systemic treatment of operable breast cancer: new perspectives 2006. Ann. Oncol. 18(12), 1927-1934 (2007).
    • (2007) Ann. Oncol , vol.18 , Issue.12 , pp. 1927-1934
    • Kaufmann, M.1    von Minckwitz, G.2    Bear, H.D.3
  • 8
    • 34548416486 scopus 로고    scopus 로고
    • Neoadjuvant endocrine therapy for locally advanced breast cancer
    • Ma CX, Ellis MJ: Neoadjuvant endocrine therapy for locally advanced breast cancer. Semin. Oncol. 33(6), 650-656 (2006).
    • (2006) Semin. Oncol , vol.33 , Issue.6 , pp. 650-656
    • Ma, C.X.1    Ellis, M.J.2
  • 10
    • 34247467863 scopus 로고    scopus 로고
    • Neoadjuvant use of endocrine therapy in breast cancer
    • Macaskill EJ, Dixon JM: Neoadjuvant use of endocrine therapy in breast cancer. Breast J. 13(3), 243-250 (2007).
    • (2007) Breast J , vol.13 , Issue.3 , pp. 243-250
    • Macaskill, E.J.1    Dixon, J.M.2
  • 11
    • 63049137792 scopus 로고    scopus 로고
    • Gene expression profiles differentiating between breast cancers clinically responsive or resistant to letrozole
    • Important study describing multigene signature predicting for neoadjuvant response to letrozole, ■■
    • Miller WR, Larionov A, Renshaw L et al.: Gene expression profiles differentiating between breast cancers clinically responsive or resistant to letrozole. J. Clin. Oncol. 27(9), 1382-1387 (2009). ■■ Important study describing multigene signature predicting for neoadjuvant response to letrozole.
    • (2009) J. Clin. Oncol , vol.27 , Issue.9 , pp. 1382-1387
    • Miller, W.R.1    Larionov, A.2    Renshaw, L.3
  • 12
    • 34648858600 scopus 로고    scopus 로고
    • Changes in breast cancer transcriptional profiles after treatment with the aromatase inhibitor, letrozole
    • Paper reports genes changed after short-term treatment with letrozole. Separates tumors into four groups depending on their molecular response to letrozole, ■
    • Miller WR, Larionov AA, Renshaw L et al.: Changes in breast cancer transcriptional profiles after treatment with the aromatase inhibitor, letrozole. Pharmacogenet. Genomics 17(10), 813-826 (2007). ■ Paper reports genes changed after short-term treatment with letrozole. Separates tumors into four groups depending on their molecular response to letrozole.
    • (2007) Pharmacogenet. Genomics , vol.17 , Issue.10 , pp. 813-826
    • Miller, W.R.1    Larionov, A.A.2    Renshaw, L.3
  • 13
    • 53249154813 scopus 로고    scopus 로고
    • Outcome prediction for estrogen receptor-positive breast cancer based on postneoadjuvant endocrine therapy tumor characteristics
    • Ellis MJ, Tao Y, Luo J et al.: Outcome prediction for estrogen receptor-positive breast cancer based on postneoadjuvant endocrine therapy tumor characteristics. J. Natl Cancer Inst. 100(19), 1380-1388 (2008).
    • (2008) J. Natl Cancer Inst , vol.100 , Issue.19 , pp. 1380-1388
    • Ellis, M.J.1    Tao, Y.2    Luo, J.3
  • 14
    • 12144282230 scopus 로고    scopus 로고
    • The scientific value of preoperative studies and how they can be used
    • Dixon JM: The scientific value of preoperative studies and how they can be used. Breast Cancer Res. Treat. 87(Suppl. 1), S19-S26 (2004).
    • (2004) Breast Cancer Res. Treat , vol.87 , Issue.SUPPL. 1
    • Dixon, J.M.1
  • 16
    • 0012633719 scopus 로고    scopus 로고
    • Neoadjuvant therapy: Surgical perspectives
    • Miller WR, Ingle JN Eds, Marcel Dekker, NY, USA
    • Dixon JM: Neoadjuvant therapy: surgical perspectives. In: Endocrine Therapy in Breast Cancer. Miller WR, Ingle JN (Eds). Marcel Dekker, NY, USA, 197-212 (2002).
    • (2002) Endocrine Therapy in Breast Cancer , pp. 197-212
    • Dixon, J.M.1
  • 17
    • 63249095994 scopus 로고    scopus 로고
    • Predicting endocrine therapy responsiveness in breast cancer
    • Ma CX, Sanchez CG, Ellis MJ: Predicting endocrine therapy responsiveness in breast cancer. Oncology (Williston Park) 23(2), 133-142 (2009).
    • (2009) Oncology (Williston Park) , vol.23 , Issue.2 , pp. 133-142
    • Ma, C.X.1    Sanchez, C.G.2    Ellis, M.J.3
  • 18
    • 19944429855 scopus 로고    scopus 로고
    • Short-term changes in Ki-67 during neoadjuvant treatment of primary breast cancer with anastrozole or tamoxifen alone or combined correlate with recurrence-free survival
    • Dowsett M, Smith IE, Ebbs SR et al.: Short-term changes in Ki-67 during neoadjuvant treatment of primary breast cancer with anastrozole or tamoxifen alone or combined correlate with recurrence-free survival. Clin. Cancer Res. 11(2 Pt 2), S951-S958 (2005).
    • (2005) Clin. Cancer Res , vol.11 , Issue.2 PART 2
    • Dowsett, M.1    Smith, I.E.2    Ebbs, S.R.3
  • 19
    • 0028203658 scopus 로고
    • Ultrasonography as a method of measuring breast tumour size and monitoring response to primary systemic treatment
    • Forouhi P, Walsh JS, Anderson TJ, Chetty U: Ultrasonography as a method of measuring breast tumour size and monitoring response to primary systemic treatment. Br. J. Surg. 81(2), 223-225 (1994).
    • (1994) Br. J. Surg , vol.81 , Issue.2 , pp. 223-225
    • Forouhi, P.1    Walsh, J.S.2    Anderson, T.J.3    Chetty, U.4
  • 20
    • 0033050164 scopus 로고    scopus 로고
    • Clinical course of breast cancer patients with complete pathologic primary tumor and axillary lymph node response to doxorubicin-based neoadjuvant chemotherapy
    • Kuerer HM, Newman LA, Smith TL et al.: Clinical course of breast cancer patients with complete pathologic primary tumor and axillary lymph node response to doxorubicin-based neoadjuvant chemotherapy. J. Clin. Oncol. 17(2), 460-469 (1999).
    • (1999) J. Clin. Oncol , vol.17 , Issue.2 , pp. 460-469
    • Kuerer, H.M.1    Newman, L.A.2    Smith, T.L.3
  • 21
    • 0033008206 scopus 로고    scopus 로고
    • Lessons from the use of aromatase inhibitors in the neoadjuvant setting
    • Dixon JM, Love CD, Renshaw L et al.: Lessons from the use of aromatase inhibitors in the neoadjuvant setting. Endocr. Relat. Cancer 6(2), 227-230 (1999).
    • (1999) Endocr. Relat. Cancer , vol.6 , Issue.2 , pp. 227-230
    • Dixon, J.M.1    Love, C.D.2    Renshaw, L.3
  • 22
    • 1542294791 scopus 로고    scopus 로고
    • Pathology of breast cancer following neoadjuvant therapy
    • Miller WR, Ingle JN Eds, Marcel Dekker, NY, USA
    • Sasano H, Suzuki T, Moriya T: Pathology of breast cancer following neoadjuvant therapy. In: Endocrine Therapy in Breast Cancer. Miller WR, Ingle JN (Eds). Marcel Dekker, NY, USA, 213-222 (2002).
    • (2002) Endocrine Therapy in Breast Cancer , pp. 213-222
    • Sasano, H.1    Suzuki, T.2    Moriya, T.3
  • 23
    • 0037194407 scopus 로고    scopus 로고
    • Effect of neoadjuvant treatment with anastrozole on tumour histology in postmenopausal women with large operable breast cancer
    • Anderson TJ, Dixon JM, Stuart M, Sahmoud T, Miller WR: Effect of neoadjuvant treatment with anastrozole on tumour histology in postmenopausal women with large operable breast cancer. Br. J. Cancer 87(3), 334-338 (2002).
    • (2002) Br. J. Cancer , vol.87 , Issue.3 , pp. 334-338
    • Anderson, T.J.1    Dixon, J.M.2    Stuart, M.3    Sahmoud, T.4    Miller, W.R.5
  • 24
    • 0345314101 scopus 로고    scopus 로고
    • Pathological features of breast cancer response following neoadjuvant treatment with either letrozole or tamoxifen
    • Miller WR, Dixon JM, MacFarlane L, Cameron D, Anderson TJ: Pathological features of breast cancer response following neoadjuvant treatment with either letrozole or tamoxifen. Eur. J. Cancer 39(4), 462-468 (2003).
    • (2003) Eur. J. Cancer , vol.39 , Issue.4 , pp. 462-468
    • Miller, W.R.1    Dixon, J.M.2    MacFarlane, L.3    Cameron, D.4    Anderson, T.J.5
  • 25
  • 26
    • 33645735920 scopus 로고    scopus 로고
    • Proliferation, steroid receptors and clinical/pathological response in breast cancer treated with letrozole
    • Miller WR, White S, Dixon JM, Murray J, Renshaw L, Anderson TJ: Proliferation, steroid receptors and clinical/pathological response in breast cancer treated with letrozole. Br. J. Cancer 94(7), 1051-1056 (2006).
    • (2006) Br. J. Cancer , vol.94 , Issue.7 , pp. 1051-1056
    • Miller, W.R.1    White, S.2    Dixon, J.M.3    Murray, J.4    Renshaw, L.5    Anderson, T.J.6
  • 27
    • 23744448408 scopus 로고    scopus 로고
    • Clinical and biomarker endpoint analysis in neoadjuvant endocrine therapy trials
    • Tao Y, Klause A, Vickers A, Bae K, Ellis M: Clinical and biomarker endpoint analysis in neoadjuvant endocrine therapy trials. J. Steroid Biochem. Mol. Biol. 95(1-5), 91-95 (2005).
    • (2005) J. Steroid Biochem. Mol. Biol , vol.95 , Issue.1-5 , pp. 91-95
    • Tao, Y.1    Klause, A.2    Vickers, A.3    Bae, K.4    Ellis, M.5
  • 28
    • 0035884620 scopus 로고    scopus 로고
    • Letrozole is more effective neoadjuvant endocrine therapy than tamoxifen for ErbB-1- and/or ErbB-2-positive, estrogen receptor-positive primary breast cancer: Evidence from a Phase III randomized trial
    • Ellis MJ, Coop A, Singh B et al.: Letrozole is more effective neoadjuvant endocrine therapy than tamoxifen for ErbB-1- and/or ErbB-2-positive, estrogen receptor-positive primary breast cancer: evidence from a Phase III randomized trial. J. Clin. Oncol. 19(18), 3808-3816 (2001).
    • (2001) J. Clin. Oncol , vol.19 , Issue.18 , pp. 3808-3816
    • Ellis, M.J.1    Coop, A.2    Singh, B.3
  • 29
    • 34548445351 scopus 로고    scopus 로고
    • Molecular response to aromatase inhibitor treatment in primary breast cancer
    • Describes genes changed after short-term preoperative treatment with aromatase inhibitors. Relates changes to proliferative response, ■
    • Mackay A, Urruticoechea A, Dixon JM et al.: Molecular response to aromatase inhibitor treatment in primary breast cancer. Breast Cancer Res. 9(3), R37 (2007). ■ Describes genes changed after short-term preoperative treatment with aromatase inhibitors. Relates changes to proliferative response.
    • (2007) Breast Cancer Res , vol.9 , Issue.3
    • Mackay, A.1    Urruticoechea, A.2    Dixon, J.M.3
  • 30
    • 45849085450 scopus 로고    scopus 로고
    • Patterns and changes in gene expression following neo-adjuvant antiestrogen treatment in estrogen receptor-positive breast cancer
    • Interesting study reporting a multigene signature predictive for neoadjuvant response to tamoxifen. Additionally analyzes a small subset of paired biopsies to describe molecular changes caused by the treatment, ■
    • Cappelletti V, Gariboldi M, De Cecco L et al.: Patterns and changes in gene expression following neo-adjuvant antiestrogen treatment in estrogen receptor-positive breast cancer. Endocr. Relat. Cancer 15(2), 439-449 (2008). ■ Interesting study reporting a multigene signature predictive for neoadjuvant response to tamoxifen. Additionally analyzes a small subset of paired biopsies to describe molecular changes caused by the treatment.
    • (2008) Endocr. Relat. Cancer , vol.15 , Issue.2 , pp. 439-449
    • Cappelletti, V.1    Gariboldi, M.2    De Cecco, L.3
  • 33
    • 75649149671 scopus 로고    scopus 로고
    • Neoadjuvant therapy: Prediction of response
    • Miller WR, Ingle JN Eds, Marcel Dekker, NY, USA
    • Miller WR, Anderson TJ, Iqbal S, Dixon JM: Neoadjuvant therapy: prediction of response. In: Endocrine Therapy in Breast Cancer. Miller WR, Ingle JN (Eds). Marcel Dekker, NY, USA, 223-229 (2002).
    • (2002) Endocrine Therapy in Breast Cancer , pp. 223-229
    • Miller, W.R.1    Anderson, T.J.2    Iqbal, S.3    Dixon, J.M.4
  • 34
    • 0034688931 scopus 로고    scopus 로고
    • Estrogen receptor (ER) and progesterone receptor (PgR), by ligand-binding assay compared with ER, PgR and pS2, by immuno-histochemistry in predicting response to tamoxifen in metastatic breast cancer: A Southwest Oncology Group Study
    • Elledge RM, Green S, Pugh R et al.: Estrogen receptor (ER) and progesterone receptor (PgR), by ligand-binding assay compared with ER, PgR and pS2, by immuno-histochemistry in predicting response to tamoxifen in metastatic breast cancer: a Southwest Oncology Group Study. Int. J. Cancer 89(2), 111-117 (2000).
    • (2000) Int. J. Cancer , vol.89 , Issue.2 , pp. 111-117
    • Elledge, R.M.1    Green, S.2    Pugh, R.3
  • 35
    • 0026747130 scopus 로고
    • Prognostic significance of progesterone receptor levels in estrogen receptor-positive patients with metastatic breast cancer treated with tamoxifen: Results of a prospective Southwest Oncology Group study
    • Ravdin PM, Green S, Dorr TM et al.: Prognostic significance of progesterone receptor levels in estrogen receptor-positive patients with metastatic breast cancer treated with tamoxifen: results of a prospective Southwest Oncology Group study. J. Clin. Oncol. 10(8), 1284-1291 (1992).
    • (1992) J. Clin. Oncol , vol.10 , Issue.8 , pp. 1284-1291
    • Ravdin, P.M.1    Green, S.2    Dorr, T.M.3
  • 36
    • 33646198056 scopus 로고    scopus 로고
    • Benefit from adjuvant tamoxifen therapy in primary breast cancer patients according oestrogen receptor, progesterone receptor, EGF receptor and HER2 status
    • Dowsett M, Houghton J, Iden C et al.: Benefit from adjuvant tamoxifen therapy in primary breast cancer patients according oestrogen receptor, progesterone receptor, EGF receptor and HER2 status. Ann. Oncol. 17(5), 818-826 (2006).
    • (2006) Ann. Oncol , vol.17 , Issue.5 , pp. 818-826
    • Dowsett, M.1    Houghton, J.2    Iden, C.3
  • 37
    • 0026502860 scopus 로고
    • Relationship between c-erbB-2 protein product expression and response to endocrine therapy in advanced breast cancer
    • Wright C, Nicholson S, Angus B et al.: Relationship between c-erbB-2 protein product expression and response to endocrine therapy in advanced breast cancer. Br. J. Cancer 65(1), 118-121 (1992).
    • (1992) Br. J. Cancer , vol.65 , Issue.1 , pp. 118-121
    • Wright, C.1    Nicholson, S.2    Angus, B.3
  • 38
    • 15744401575 scopus 로고    scopus 로고
    • Correlation of HER-2 status with estrogen and progesterone receptors and histologic features in 3,655 invasive breast carcinomas
    • Lal P, Tan LK, Chen B: Correlation of HER-2 status with estrogen and progesterone receptors and histologic features in 3,655 invasive breast carcinomas. Am. J. Clin. Pathol. 123(4), 541-546 (2005).
    • (2005) Am. J. Clin. Pathol , vol.123 , Issue.4 , pp. 541-546
    • Lal, P.1    Tan, L.K.2    Chen, B.3
  • 39
    • 57149104138 scopus 로고    scopus 로고
    • Recommendations for collection and handling of specimens from group breast cancer clinical trials
    • Leyland-Jones BR, Ambrosone CB, Bartlett J et al.: Recommendations for collection and handling of specimens from group breast cancer clinical trials. J. Clin. Oncol. 26(34), 5638-5644 (2008).
    • (2008) J. Clin. Oncol , vol.26 , Issue.34 , pp. 5638-5644
    • Leyland-Jones, B.R.1    Ambrosone, C.B.2    Bartlett, J.3
  • 40
    • 37349059336 scopus 로고    scopus 로고
    • Tissue handling for genome-wide expression analysis: A review of the issues, evidence, and opportunities
    • Medeiros F, Rigl CT, Anderson GG, Becker SH, Halling KC: Tissue handling for genome-wide expression analysis: a review of the issues, evidence, and opportunities. Arch. Pathol. Lab. Med. 131(12), 1805-1816 (2007).
    • (2007) Arch. Pathol. Lab. Med , vol.131 , Issue.12 , pp. 1805-1816
    • Medeiros, F.1    Rigl, C.T.2    Anderson, G.G.3    Becker, S.H.4    Halling, K.C.5
  • 41
    • 33748325938 scopus 로고    scopus 로고
    • Real-time quantitative RT-PCR shows variable, assay-dependent sensitivity to formalin fixation: Implications for direct comparison of transcript levels in paraffin-embedded tissues
    • Koch I, Slotta-Huspenina J, Hollweck R et al.: Real-time quantitative RT-PCR shows variable, assay-dependent sensitivity to formalin fixation: implications for direct comparison of transcript levels in paraffin-embedded tissues. Diagn. Mol. Pathol. 15(3), 149-156 (2006).
    • (2006) Diagn. Mol. Pathol , vol.15 , Issue.3 , pp. 149-156
    • Koch, I.1    Slotta-Huspenina, J.2    Hollweck, R.3
  • 43
    • 57349105253 scopus 로고    scopus 로고
    • Tissue handling and specimen preparation in surgical pathology: Issues concerning the recovery of nucleic acids from formalin-fixed, paraffin-embedded tissue
    • Hewitt SM, Lewis FA, Cao Y et al.: Tissue handling and specimen preparation in surgical pathology: issues concerning the recovery of nucleic acids from formalin-fixed, paraffin-embedded tissue. Arch. Pathol. Lab. Med. 132(12), 1929-1935 (2008).
    • (2008) Arch. Pathol. Lab. Med , vol.132 , Issue.12 , pp. 1929-1935
    • Hewitt, S.M.1    Lewis, F.A.2    Cao, Y.3
  • 44
    • 84934436484 scopus 로고    scopus 로고
    • Complementary techniques: Laser capture microdissection - increasing specificity of gene expression profiling of cancer specimens
    • Esposito G: Complementary techniques: laser capture microdissection - increasing specificity of gene expression profiling of cancer specimens. Adv. Exp. Med. Biol. 593, 54-65 (2007).
    • (2007) Adv. Exp. Med. Biol , vol.593 , pp. 54-65
    • Esposito, G.1
  • 45
    • 20044377912 scopus 로고    scopus 로고
    • Jansen MP, Foekens JA, van Staveren IL et al.: Molecular classification of tamoxifen-resistant breast carcinomas by gene expression profiling. J. Clin. Oncol. 23(4), 732-740 (2005). ■ Interesting study that reports a gene-expression signature predicting for response to tamoxifen in advanced breast cancer.
    • Jansen MP, Foekens JA, van Staveren IL et al.: Molecular classification of tamoxifen-resistant breast carcinomas by gene expression profiling. J. Clin. Oncol. 23(4), 732-740 (2005). ■ Interesting study that reports a gene-expression signature predicting for response to tamoxifen in advanced breast cancer.
  • 47
    • 33644850222 scopus 로고    scopus 로고
    • Options available for profiling small samples: A review of sample amplification technology when combined with microarray profiling
    • Nygaard V, Hovig E: Options available for profiling small samples: a review of sample amplification technology when combined with microarray profiling. Nucleic Acids Res. 34(3), 996-1014 (2006).
    • (2006) Nucleic Acids Res , vol.34 , Issue.3 , pp. 996-1014
    • Nygaard, V.1    Hovig, E.2
  • 48
    • 75649138945 scopus 로고    scopus 로고
    • Product survey: DNA/RNA isolation. Spoilt for choice
    • Zahringer H: Product survey: DNA/RNA isolation. Spoilt for choice. Lab Times 5, 50-58 (2007).
    • (2007) Lab Times , vol.5 , pp. 50-58
    • Zahringer, H.1
  • 49
    • 75649150360 scopus 로고    scopus 로고
    • Ambion AB: mirVana™ miRNA Isolation Kit - Instruction Manual (2008).
    • Ambion AB: mirVana™ miRNA Isolation Kit - Instruction Manual (2008).
  • 50
    • 75649107419 scopus 로고    scopus 로고
    • Qiagen: miRNeasy Mini Handbook (2007).
    • Qiagen: miRNeasy Mini Handbook (2007).
  • 51
    • 33645241407 scopus 로고    scopus 로고
    • The RIN: An RNA integrity number for assigning integrity values to RNA measurements
    • Schroeder A, Mueller O, Stocker S et al.: The RIN: an RNA integrity number for assigning integrity values to RNA measurements. BMC Mol. Biol. 7, 3 (2006).
    • (2006) BMC Mol. Biol , vol.7 , pp. 3
    • Schroeder, A.1    Mueller, O.2    Stocker, S.3
  • 52
    • 34250308050 scopus 로고    scopus 로고
    • RNA quality in frozen breast cancer samples and the influence on gene expression analysis - a comparison of three evaluation methods using microcapillary electrophoresis traces
    • Strand C, Enell J, Hedenfalk I, Ferno M: RNA quality in frozen breast cancer samples and the influence on gene expression analysis - a comparison of three evaluation methods using microcapillary electrophoresis traces. BMC Mol. Biol. 8, 38 (2007).
    • (2007) BMC Mol. Biol , vol.8 , pp. 38
    • Strand, C.1    Enell, J.2    Hedenfalk, I.3    Ferno, M.4
  • 53
    • 2142826519 scopus 로고    scopus 로고
    • Proteinase K added to the extraction procedure markedly increases RNA yield from primary breast tumors for use in microarray studies
    • Egyhazi S, Bjohle J, Skoog L et al.: Proteinase K added to the extraction procedure markedly increases RNA yield from primary breast tumors for use in microarray studies. Clin. Chem. 50(5), 975-976 (2004).
    • (2004) Clin. Chem , vol.50 , Issue.5 , pp. 975-976
    • Egyhazi, S.1    Bjohle, J.2    Skoog, L.3
  • 54
    • 0027399391 scopus 로고
    • An improved strategy and a useful housekeeping gene for RNA analysis from formalin-fixed, paraffin-embedded tissues by PCR
    • Finke J, Fritzen R, Ternes P, Lange W, Dolken G: An improved strategy and a useful housekeeping gene for RNA analysis from formalin-fixed, paraffin-embedded tissues by PCR. Biotechniques 14(3), 448-453 (1993).
    • (1993) Biotechniques , vol.14 , Issue.3 , pp. 448-453
    • Finke, J.1    Fritzen, R.2    Ternes, P.3    Lange, W.4    Dolken, G.5
  • 55
    • 0036147870 scopus 로고    scopus 로고
    • Multiplex polymerase chain reaction: A practical approach
    • Markoulatos P, Siafakas N, Moncany M: Multiplex polymerase chain reaction: a practical approach. J. Clin. Lab. Anal. 16(1), 47-51 (2002).
    • (2002) J. Clin. Lab. Anal , vol.16 , Issue.1 , pp. 47-51
    • Markoulatos, P.1    Siafakas, N.2    Moncany, M.3
  • 56
    • 58149312870 scopus 로고    scopus 로고
    • Nanoliter high-throughput PCR for DNA and RNA profiling
    • Brenan CJ, Roberts D, Hurley J: Nanoliter high-throughput PCR for DNA and RNA profiling. Methods Mol. Biol. 496, 161-174 (2009).
    • (2009) Methods Mol. Biol , vol.496 , pp. 161-174
    • Brenan, C.J.1    Roberts, D.2    Hurley, J.3
  • 57
    • 65549147184 scopus 로고    scopus 로고
    • Real-time DNA microarrays: Reality check
    • Chagovetz A, Blair S: Real-time DNA microarrays: reality check. Biochem. Soc. Trans. 37(Pt 2), 471-475 (2009).
    • (2009) Biochem. Soc. Trans , vol.37 , Issue.PART 2 , pp. 471-475
    • Chagovetz, A.1    Blair, S.2
  • 58
    • 42549117698 scopus 로고    scopus 로고
    • From single gene to integrative molecular concept MAPS: Pitfalls and potentials of microarray technology
    • Chiorino G, Mello Grand M, Scatolini M, Ostano P: From single gene to integrative molecular concept MAPS: pitfalls and potentials of microarray technology. J. Biol. Regul. Homeost. Agents 22(1), 7-16 (2008).
    • (2008) J. Biol. Regul. Homeost. Agents , vol.22 , Issue.1 , pp. 7-16
    • Chiorino, G.1    Mello Grand, M.2    Scatolini, M.3    Ostano, P.4
  • 59
    • 33645808222 scopus 로고    scopus 로고
    • Large scale real-time PCR validation on gene expression measurements from two commercial long-oligonucleotide microarrays
    • Wang Y, Barbacioru C, Hyland F et al.: Large scale real-time PCR validation on gene expression measurements from two commercial long-oligonucleotide microarrays. BMC Genomics 7, 59 (2006).
    • (2006) BMC Genomics , vol.7 , pp. 59
    • Wang, Y.1    Barbacioru, C.2    Hyland, F.3
  • 60
    • 33847221847 scopus 로고    scopus 로고
    • Elimination of laboratory ozone leads to a dramatic improvement in the reproducibility of microarray gene expression measurements
    • Refreshing paper describing unexpected perspective for quality assurance in microarray studies, ■
    • Branham WS, Melvin CD, Han T et al.: Elimination of laboratory ozone leads to a dramatic improvement in the reproducibility of microarray gene expression measurements. BMC Biotechnol. 7, 8 (2007). ■ Refreshing paper describing unexpected perspective for quality assurance in microarray studies.
    • (2007) BMC Biotechnol , vol.7 , pp. 8
    • Branham, W.S.1    Melvin, C.D.2    Han, T.3
  • 61
    • 33748491517 scopus 로고    scopus 로고
    • Shi L, Reid LH, Jones WD et al.: The MicroArray Quality Control (MAQC) project shows inter- and intraplatform reproducibility of gene expression measurements. Nat. Biotechnol. 24(9), 1151-1161 (2006). ■ Report confirming that, despite some initial concerns, microarray technologies have reached the level sufficient for reliable assessment of gene expressions.
    • Shi L, Reid LH, Jones WD et al.: The MicroArray Quality Control (MAQC) project shows inter- and intraplatform reproducibility of gene expression measurements. Nat. Biotechnol. 24(9), 1151-1161 (2006). ■ Report confirming that, despite some initial concerns, microarray technologies have reached the level sufficient for reliable assessment of gene expressions.
  • 62
    • 48549086654 scopus 로고    scopus 로고
    • Cross-platform comparison of SYBR Green real-time PCR with TaqMan PCR, microarrays and other gene expression measurement technologies evaluated in the MicroArray Quality Control (MAQC) study
    • Arikawa E, Sun Y, Wang J et al.: Cross-platform comparison of SYBR Green real-time PCR with TaqMan PCR, microarrays and other gene expression measurement technologies evaluated in the MicroArray Quality Control (MAQC) study. BMC Genomics 9, 328 (2008).
    • (2008) BMC Genomics , vol.9 , pp. 328
    • Arikawa, E.1    Sun, Y.2    Wang, J.3
  • 63
    • 33644914709 scopus 로고    scopus 로고
    • The real-time polymerase chain reaction
    • Kubista M, Andrade JM, Bengtsson M et al.: The real-time polymerase chain reaction. Mol. Aspects Med. 27(2-3), 95-125 (2006).
    • (2006) Mol. Aspects Med , vol.27 , Issue.2-3 , pp. 95-125
    • Kubista, M.1    Andrade, J.M.2    Bengtsson, M.3
  • 64
  • 65
    • 29244448340 scopus 로고    scopus 로고
    • Microarray data analysis: From disarray to consolidation and consensus
    • Allison DB, Cui X, Page GP, Sabripour M: Microarray data analysis: from disarray to consolidation and consensus. Nat. Rev. Genet. 7(1), 55-65 (2006).
    • (2006) Nat. Rev. Genet , vol.7 , Issue.1 , pp. 55-65
    • Allison, D.B.1    Cui, X.2    Page, G.P.3    Sabripour, M.4
  • 67
    • 33747868133 scopus 로고    scopus 로고
    • Scanning microarrays: Current methods and future directions
    • Timlin JA: Scanning microarrays: current methods and future directions. Methods Enzymol. 411, 79-98 (2006).
    • (2006) Methods Enzymol , vol.411 , pp. 79-98
    • Timlin, J.A.1
  • 68
    • 33846561627 scopus 로고    scopus 로고
    • Effect of various normalization methods on Applied Biosystems expression array system data
    • Barbacioru CC, Wang Y, Canales RD et al.: Effect of various normalization methods on Applied Biosystems expression array system data. BMC Bioinformatics 7, 533 (2006).
    • (2006) BMC Bioinformatics , vol.7 , pp. 533
    • Barbacioru, C.C.1    Wang, Y.2    Canales, R.D.3
  • 69
    • 39149115688 scopus 로고    scopus 로고
    • Bioinformatics applications for pathway analysis of microarray data
    • Werner T: Bioinformatics applications for pathway analysis of microarray data. Curr. Opin. Biotechnol. 19(1), 50-54 (2008).
    • (2008) Curr. Opin. Biotechnol , vol.19 , Issue.1 , pp. 50-54
    • Werner, T.1
  • 70
    • 40749097651 scopus 로고    scopus 로고
    • Methods for handling multiple testing
    • Rice TK, Schork NJ, Rao DC: Methods for handling multiple testing. Adv. Genet. 60, 293-308 (2008).
    • (2008) Adv. Genet , vol.60 , pp. 293-308
    • Rice, T.K.1    Schork, N.J.2    Rao, D.C.3
  • 71
    • 0037245343 scopus 로고    scopus 로고
    • Pitfalls in the use of DNA microarray data for diagnostic and prognostic classification
    • Simon R, Radmacher MD, Dobbin K, McShane LM: Pitfalls in the use of DNA microarray data for diagnostic and prognostic classification. J. Natl Cancer Inst. 95(1), 14-18 (2003).
    • (2003) J. Natl Cancer Inst , vol.95 , Issue.1 , pp. 14-18
    • Simon, R.1    Radmacher, M.D.2    Dobbin, K.3    McShane, L.M.4
  • 72
    • 1942438016 scopus 로고    scopus 로고
    • Rules of evidence for cancer molecular-marker discovery and validation
    • Ransohoff DF: Rules of evidence for cancer molecular-marker discovery and validation. Nat. Rev. Cancer 4(4), 309-314 (2004).
    • (2004) Nat. Rev. Cancer , vol.4 , Issue.4 , pp. 309-314
    • Ransohoff, D.F.1
  • 73
    • 58149145635 scopus 로고    scopus 로고
    • Validation of biomarker-based risk prediction models
    • Taylor JM, Ankerst DP, Andridge RR: Validation of biomarker-based risk prediction models. Clin. Cancer Res. 14(19), 5977-5983 (2008).
    • (2008) Clin. Cancer Res , vol.14 , Issue.19 , pp. 5977-5983
    • Taylor, J.M.1    Ankerst, D.P.2    Andridge, R.R.3
  • 74
    • 25144494760 scopus 로고    scopus 로고
    • Prediction error estimation: A comparison of resampling methods
    • Molinaro AM, Simon R, Pfeiffer RM: Prediction error estimation: a comparison of resampling methods. Bioinformatics 21(15), 3301-3307 (2005).
    • (2005) Bioinformatics , vol.21 , Issue.15 , pp. 3301-3307
    • Molinaro, A.M.1    Simon, R.2    Pfeiffer, R.M.3
  • 75
    • 56949083321 scopus 로고    scopus 로고
    • Gene expression predictors in breast cancer: Current status, limitations and perspectives
    • Desmedt C, Ruiz-Garcia E, Andre F: Gene expression predictors in breast cancer: current status, limitations and perspectives. Eur. J. Cancer 44(18), 2714-2720 (2008).
    • (2008) Eur. J. Cancer , vol.44 , Issue.18 , pp. 2714-2720
    • Desmedt, C.1    Ruiz-Garcia, E.2    Andre, F.3
  • 76
    • 64149132942 scopus 로고    scopus 로고
    • MicroRNAs: Novel biomarkers for human cancer
    • Bartels CL, Tsongalis GJ: MicroRNAs: novel biomarkers for human cancer. Clin. Chem. 55(4), 623-631 (2009).
    • (2009) Clin. Chem , vol.55 , Issue.4 , pp. 623-631
    • Bartels, C.L.1    Tsongalis, G.J.2
  • 77
  • 78
    • 44949149181 scopus 로고    scopus 로고
    • Comparative genomic hybridisation arrays: High-throughput tools to determine targeted therapy in breast cancer
    • Tan DS, Reis-Filho JS: Comparative genomic hybridisation arrays: high-throughput tools to determine targeted therapy in breast cancer. Pathobiology 75(2), 63-74 (2008).
    • (2008) Pathobiology , vol.75 , Issue.2 , pp. 63-74
    • Tan, D.S.1    Reis-Filho, J.S.2
  • 79
    • 49649120960 scopus 로고    scopus 로고
    • Proteomics of cancer of hormone-dependent tissues
    • Tyson DR, Ornstein DK: Proteomics of cancer of hormone-dependent tissues. Adv. Exp. Med. Biol. 630, 133-147 (2008).
    • (2008) Adv. Exp. Med. Biol , vol.630 , pp. 133-147
    • Tyson, D.R.1    Ornstein, D.K.2
  • 80
    • 64149123778 scopus 로고    scopus 로고
    • Next-generation sequencing: From basic research to diagnostics
    • Voelkerding KV, Dames SA, Durtschi JD: Next-generation sequencing: from basic research to diagnostics. Clin. Chem. 55(4), 641-658 (2009).
    • (2009) Clin. Chem , vol.55 , Issue.4 , pp. 641-658
    • Voelkerding, K.V.1    Dames, S.A.2    Durtschi, J.D.3
  • 81
    • 57749195712 scopus 로고    scopus 로고
    • RNA-Seq: A revolutionary tool for transcriptomics
    • Wang Z, Gerstein M, Snyder M: RNA-Seq: a revolutionary tool for transcriptomics. Nat. Rev. Genet. 10(1), 57-63 (2009).
    • (2009) Nat. Rev. Genet , vol.10 , Issue.1 , pp. 57-63
    • Wang, Z.1    Gerstein, M.2    Snyder, M.3
  • 82
    • 39149113165 scopus 로고    scopus 로고
    • Development of the 21-gene assay and its application in clinical practice and clinical trials
    • Sparano JA, Paik S: Development of the 21-gene assay and its application in clinical practice and clinical trials. J. Clin. Oncol. 26(5), 721-728 (2008).
    • (2008) J. Clin. Oncol , vol.26 , Issue.5 , pp. 721-728
    • Sparano, J.A.1    Paik, S.2
  • 83
    • 33748693297 scopus 로고    scopus 로고
    • Validation and clinical utility of a 70-gene prognostic signature for women with node-negative breast cancer
    • Buyse M, Loi S, van't Veer L et al.: Validation and clinical utility of a 70-gene prognostic signature for women with node-negative breast cancer. J. Natl Cancer Inst. 98(17), 1183-1192 (2006).
    • (2006) J. Natl Cancer Inst , vol.98 , Issue.17 , pp. 1183-1192
    • Buyse, M.1    Loi, S.2    van't Veer, L.3
  • 84
    • 38749100194 scopus 로고    scopus 로고
    • Predicting response and resistance to endocrine therapy: Profiling patients on aromatase inhibitors
    • Miller WR, Larionov A, Anderson TJ et al.: Predicting response and resistance to endocrine therapy: profiling patients on aromatase inhibitors. Cancer 112(3 Suppl.), 689-694 (2008).
    • (2008) Cancer , vol.112 , Issue.3 SUPPL. , pp. 689-694
    • Miller, W.R.1    Larionov, A.2    Anderson, T.J.3
  • 85
    • 70349671243 scopus 로고    scopus 로고
    • Algorithm for in vitro diagnostic multivariate index assay
    • Kato K: Algorithm for in vitro diagnostic multivariate index assay. Breast Cancer 16(4), 248-251 (2009).
    • (2009) Breast Cancer , vol.16 , Issue.4 , pp. 248-251
    • Kato, K.1
  • 86
    • 33644688970 scopus 로고    scopus 로고
    • Roadmap for developing and validating therapeutically relevant genomic classifiers
    • Simon R: Roadmap for developing and validating therapeutically relevant genomic classifiers. J. Clin. Oncol. 23(29), 7332-7341 (2005).
    • (2005) J. Clin. Oncol , vol.23 , Issue.29 , pp. 7332-7341
    • Simon, R.1
  • 87
    • 59849127767 scopus 로고    scopus 로고
    • Recommendations from the EGAPP Working Group: Can tumor gene expression profiling improve outcomes in patients with breast cancer?
    • Berg AO, Armstrong K, Botkin J et al.: Recommendations from the EGAPP Working Group: can tumor gene expression profiling improve outcomes in patients with breast cancer? Genet. Med. 11(1), 66-73 (2009).
    • (2009) Genet. Med , vol.11 , Issue.1 , pp. 66-73
    • Berg, A.O.1    Armstrong, K.2    Botkin, J.3
  • 88
    • 34147164024 scopus 로고    scopus 로고
    • Is molecular profiling ready for use in clinical decision making?
    • Ioannidis JP: Is molecular profiling ready for use in clinical decision making? Oncologist 12(3), 301-311 (2007).
    • (2007) Oncologist , vol.12 , Issue.3 , pp. 301-311
    • Ioannidis, J.P.1
  • 91
    • 75649141066 scopus 로고    scopus 로고
    • Controlled vocabulary describing genes in terms of biological processes, molecular functions and cellular locations of their products www.geneontology.org
    • Controlled vocabulary describing genes in terms of biological processes, molecular functions and cellular locations of their products www.geneontology.org


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