-
1
-
-
19944429289
-
Prospective evaluation of estrogen receptor-β in predicting response to neoadjuvant antiestrogen therapy in elderly breast cancer patients
-
Cappelletti V, Celio L, Bajetta E, Allevi A, Longarini R, Miodini P, Villa R, Fabbri A, Mariani L, Giovanazzi R et al. 2004 Prospective evaluation of estrogen receptor-β in predicting response to neoadjuvant antiestrogen therapy in elderly breast cancer patients. Endocrine-Related Cancer 11 761-770.
-
(2004)
Endocrine-Related Cancer
, vol.11
, pp. 761-770
-
-
Cappelletti, V.1
Celio, L.2
Bajetta, E.3
Allevi, A.4
Longarini, R.5
Miodini, P.6
Villa, R.7
Fabbri, A.8
Mariani, L.9
Giovanazzi, R.10
-
2
-
-
7944231119
-
Gene expression profiling of advanced ovarian cancer: Characterization of a molecular signature involving fibroblast growth factor 2
-
De Cecco L, Marchionni L, Gariboldi M, Reid JF, Lagonigro MS, Caramuta S, Ferrario C, Bussani E, Mezzanzanica D, Turatti F et al. 2004 Gene expression profiling of advanced ovarian cancer: characterization of a molecular signature involving fibroblast growth factor 2. Oncogene 23 8171-8183.
-
(2004)
Oncogene
, vol.23
, pp. 8171-8183
-
-
De Cecco, L.1
Marchionni, L.2
Gariboldi, M.3
Reid, J.F.4
Lagonigro, M.S.5
Caramuta, S.6
Ferrario, C.7
Bussani, E.8
Mezzanzanica, D.9
Turatti, F.10
-
3
-
-
0042125511
-
Gene profiling for the prediction of therapeutic response to docetaxel in patients with breast cancer
-
Chang JC, Wooten EC, Tsimelzon A, Hilsenbeck SG, Gutierrez MC, Elledge R, Mohsin S, Osborne CK, Chamness GC, Allred DC et al. 2003 Gene profiling for the prediction of therapeutic response to docetaxel in patients with breast cancer. Lancet 362 362-369.
-
(2003)
Lancet
, vol.362
, pp. 362-369
-
-
Chang, J.C.1
Wooten, E.C.2
Tsimelzon, A.3
Hilsenbeck, S.G.4
Gutierrez, M.C.5
Elledge, R.6
Mohsin, S.7
Osborne, C.K.8
Chamness, G.C.9
Allred, D.C.10
-
4
-
-
20044390359
-
Patterns of resistance and incomplete response to docetaxel by gene expression profiling in breast cancer patients
-
Chang JC, Wooten EC, Tsimelzon A, Hilsenbeck SG, Gutierrez MC, Tham YL, Kalidas M, Elledge R, Mohsin S, Osborne CK et al. 2005 Patterns of resistance and incomplete response to docetaxel by gene expression profiling in breast cancer patients. Journal of Clinical Oncology 23 1169-1177.
-
(2005)
Journal of Clinical Oncology
, vol.23
, pp. 1169-1177
-
-
Chang, J.C.1
Wooten, E.C.2
Tsimelzon, A.3
Hilsenbeck, S.G.4
Gutierrez, M.C.5
Tham, Y.L.6
Kalidas, M.7
Elledge, R.8
Mohsin, S.9
Osborne, C.K.10
-
5
-
-
0038005018
-
DAVID: Database for annotation, visualization, and integrated discovery
-
Dennis G Jr, Sherman BT, Hosack DA, Yang J, Gao W, Lane HC & Lempicki RA 2003 DAVID: database for annotation, visualization, and integrated discovery. Genome Biology 4 P3.
-
(2003)
Genome Biology
, vol.4
-
-
Dennis Jr, G.1
Sherman, B.T.2
Hosack, D.A.3
Yang, J.4
Gao, W.5
Lane, H.C.6
Lempicki, R.A.7
-
6
-
-
0037251963
-
SOURCE: A unified genomic resource of functional annotations, ontologies, and gene expression data
-
Diehn M, Sherlock G, Binkley G, Jin H, Metese JC, Hernandez-Boussard T, Reees CA, Cherry JM, Botstein D, Brown PO et al. 2003 SOURCE: a unified genomic resource of functional annotations, ontologies, and gene expression data. Nucleic Acids Research 31 219-223.
-
(2003)
Nucleic Acids Research
, vol.31
, pp. 219-223
-
-
Diehn, M.1
Sherlock, G.2
Binkley, G.3
Jin, H.4
Metese, J.C.5
Hernandez-Boussard, T.6
Reees, C.A.7
Cherry, J.M.8
Botstein, D.9
Brown, P.O.10
-
7
-
-
0034901971
-
Influence of neoadjuvant anastrazole (Arimidex) on intratumoral estrogen levels and proliferation markers in patients with locally advanced breast cancer
-
Geisler J, Detre S, Berntsen H, Ottestad L, Lindtjorn B, Dowsett M & Eistein Lonning P 2001 Influence of neoadjuvant anastrazole (Arimidex) on intratumoral estrogen levels and proliferation markers in patients with locally advanced breast cancer. Clinical Cancer Research 7 1230-1236.
-
(2001)
Clinical Cancer Research
, vol.7
, pp. 1230-1236
-
-
Geisler, J.1
Detre, S.2
Berntsen, H.3
Ottestad, L.4
Lindtjorn, B.5
Dowsett, M.6
Eistein Lonning, P.7
-
8
-
-
20644447122
-
Changes in gene expression associated with response to neoadjuvant chemotherapy in breast cancer
-
Hannemann J, Oosterkamp HM, Bosch CA, Velds A, Wessels LF, Loo C, Rutgers EJ, Rodenhuis S & van de Vijver MJ 2005 Changes in gene expression associated with response to neoadjuvant chemotherapy in breast cancer. Journal of Clinical Oncology 23 3331-3342.
-
(2005)
Journal of Clinical Oncology
, vol.23
, pp. 3331-3342
-
-
Hannemann, J.1
Oosterkamp, H.M.2
Bosch, C.A.3
Velds, A.4
Wessels, L.F.5
Loo, C.6
Rutgers, E.J.7
Rodenhuis, S.8
van de Vijver, M.J.9
-
9
-
-
20044377912
-
Molecular classification of tamoxifen-resistant breast carcinomas by gene expression profiling
-
Jansen MP, Foekens JA, van Staveren IL, Dirkzwager-Kiel MM, Ritstier K, Look MP, Meijervan Gelder ME, Sieuwerts AM, Portengen H, Dorssers LC et al. 2005 Molecular classification of tamoxifen-resistant breast carcinomas by gene expression profiling. Journal of Clinical Oncology 23 732-740.
-
(2005)
Journal of Clinical Oncology
, vol.23
, pp. 732-740
-
-
Jansen, M.P.1
Foekens, J.A.2
van Staveren, I.L.3
Dirkzwager-Kiel, M.M.4
Ritstier, K.5
Look, M.P.6
Meijervan Gelder, M.E.7
Sieuwerts, A.M.8
Portengen, H.9
Dorssers, L.C.10
-
10
-
-
0037250168
-
The UCSC genome browser database
-
Karolchik D, Baertsch R, Diekhans M, Furey TS, Hinrichs A, Lu YT, Roskin KM, Schwartz M, Sugnet CW, Thomas DJ et al. 2003 The UCSC genome browser database. Nucleic Acids Research 31 51-54.
-
(2003)
Nucleic Acids Research
, vol.31
, pp. 51-54
-
-
Karolchik, D.1
Baertsch, R.2
Diekhans, M.3
Furey, T.S.4
Hinrichs, A.5
Lu, Y.T.6
Roskin, K.M.7
Schwartz, M.8
Sugnet, C.W.9
Thomas, D.J.10
-
11
-
-
0036226603
-
BLAT - the BLAST-Like alignment tool
-
Kent WJ 2002 BLAT - the BLAST-Like alignment tool. Genome Research 12 656-664.
-
(2002)
Genome Research
, vol.12
, pp. 656-664
-
-
Kent, W.J.1
-
12
-
-
2942578063
-
A two-gene expression ratio predicts clinical outcome in breast cancer patients treated with tamoxifen
-
Ma XJ, Wang Z, Ryan PD, Isakoff SJ, Barmettler A, Fuller A, Muir B, Mohapatra G, Salunga R, Tuggle JT et al. 2004 A two-gene expression ratio predicts clinical outcome in breast cancer patients treated with tamoxifen. Cancer Cell 5 607-616.
-
(2004)
Cancer Cell
, vol.5
, pp. 607-616
-
-
Ma, X.J.1
Wang, Z.2
Ryan, P.D.3
Isakoff, S.J.4
Barmettler, A.5
Fuller, A.6
Muir, B.7
Mohapatra, G.8
Salunga, R.9
Tuggle, J.T.10
-
13
-
-
23744455456
-
Effects of anastrazole on the intratumoral gene expression in locally advanced breast cancer
-
Nedelcheva Kristensen V, Sorlie T, Geisler J, Yoshimura N, Linegjaerde OC, Glad I, Frigessi A, Harada N, Lonning PE & Borresen-Dale AL 2005 Effects of anastrazole on the intratumoral gene expression in locally advanced breast cancer. Journal of Steroid Biochemistry and Molecular Biology 95 105-111.
-
(2005)
Journal of Steroid Biochemistry and Molecular Biology
, vol.95
, pp. 105-111
-
-
Nedelcheva Kristensen, V.1
Sorlie, T.2
Geisler, J.3
Yoshimura, N.4
Linegjaerde, O.C.5
Glad, I.6
Frigessi, A.7
Harada, N.8
Lonning, P.E.9
Borresen-Dale, A.L.10
-
14
-
-
19944422061
-
A multigene assay to predict recurrence of tamoxifen-treated, node-negative breast cancer patients
-
Paik S, Shak S, Tang G, Kim C, Baker J, Cronin M, Baehner FL, Walker MG, Watson D, Park T et al. 2004 A multigene assay to predict recurrence of tamoxifen-treated, node-negative breast cancer patients. New England Journal of Medicine 351 2817-2826.
-
(2004)
New England Journal of Medicine
, vol.351
, pp. 2817-2826
-
-
Paik, S.1
Shak, S.2
Tang, G.3
Kim, C.4
Baker, J.5
Cronin, M.6
Baehner, F.L.7
Walker, M.G.8
Watson, D.9
Park, T.10
-
15
-
-
0034690750
-
UK and USA breast cancer deaths down 25% in year 2000 at ages 20-69 years
-
Peto R, Boreham J, Clarke M, Davies C & Beral V 2000 UK and USA breast cancer deaths down 25% in year 2000 at ages 20-69 years. Lancet 355 1822.
-
(2000)
Lancet
, vol.355
, pp. 1822
-
-
Peto, R.1
Boreham, J.2
Clarke, M.3
Davies, C.4
Beral, V.5
-
17
-
-
33748324384
-
-
R Foundation for Statistical Computing, Vienna, Austria. ISBN 3-900051-07-0, URL
-
R Development Core Team 2006 R: a language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, Austria. ISBN 3-900051-07-0, URL http://www.R-project.org.
-
(2006)
R: A language and environment for statistical computing
-
-
-
18
-
-
0037099005
-
BioArray software environment (BASE): A platform for comprehensive management and analysis of microarray data
-
software0003.1-software0003.6
-
Saal LH, Troein C, Vallon-Christersson J, Gruvberger S, Borg A & Peterson C 2002 BioArray software environment (BASE): a platform for comprehensive management and analysis of microarray data. Genome Biology 3 software0003.1-software0003.6.
-
(2002)
Genome Biology
, vol.3
-
-
Saal, L.H.1
Troein, C.2
Vallon-Christersson, J.3
Gruvberger, S.4
Borg, A.5
Peterson, C.6
-
19
-
-
33644996125
-
Challenge and promise: Roles for CLU in pathogenesis, progression and therapy of cancer
-
Shannon B, Seifert M, Leskov K, Willis J, Boothman D, Tilgen W & Reichrath J 2006 Challenge and promise: roles for CLU in pathogenesis, progression and therapy of cancer. Cell Death and Differentiation 13 12-19.
-
(2006)
Cell Death and Differentiation
, vol.13
, pp. 12-19
-
-
Shannon, B.1
Seifert, M.2
Leskov, K.3
Willis, J.4
Boothman, D.5
Tilgen, W.6
Reichrath, J.7
-
20
-
-
2942652871
-
Mechanisms of tamoxifen resistance: Increased estrogen receptor-HER2/neu crosstalk in ER/HER2-positive breast cancer
-
Shou J, Massarweh S, Osborne CK, Wakeling Wakeling AE, Ali S, Weiss H & Schiff R 2004 Mechanisms of tamoxifen resistance: increased estrogen receptor-HER2/neu crosstalk in ER/HER2-positive breast cancer. Journal of the National Cancer Institute 96 926-935.
-
(2004)
Journal of the National Cancer Institute
, vol.96
, pp. 926-935
-
-
Shou, J.1
Massarweh, S.2
Osborne, C.K.3
Wakeling Wakeling, A.E.4
Ali, S.5
Weiss, H.6
Schiff, R.7
-
21
-
-
2942608807
-
-
ch 7. New York: Springer-Verlag
-
Simon R, Korn E, McShane L, Radmacher MD, Wright GW & Zhao Y 2003 In Design and Analysis of DNA Microarray Investigations, ch 7. New York: Springer-Verlag.
-
(2003)
Design and Analysis of DNA Microarray Investigations
-
-
Simon, R.1
Korn, E.2
McShane, L.3
Radmacher, M.D.4
Wright, G.W.5
Zhao, Y.6
-
22
-
-
34447560961
-
Analysis of gene expression data using BRB-Array tools
-
Simon R, Lam A, Li MC, Ngan M, Menenzes S & Zhao Y 2007 Analysis of gene expression data using BRB-Array tools. Cancer Informatics 2 11-17.
-
(2007)
Cancer Informatics
, vol.2
, pp. 11-17
-
-
Simon, R.1
Lam, A.2
Li, M.C.3
Ngan, M.4
Menenzes, S.5
Zhao, Y.6
-
23
-
-
0345549481
-
Effect of estradiol on estrogen receptor-α gene expression and activity can be modulated by the ErbB2/PI 3-K/Akt pathway
-
Stoica GE, Franke TF, Moroni M, Mueller S, Morgan E, Iann MC, Winder AD, Reiter R, Wellstein A & Martin MB 2003 Effect of estradiol on estrogen receptor-α gene expression and activity can be modulated by the ErbB2/PI 3-K/Akt pathway. Oncogene 22 7998-8011.
-
(2003)
Oncogene
, vol.22
, pp. 7998-8011
-
-
Stoica, G.E.1
Franke, T.F.2
Moroni, M.3
Mueller, S.4
Morgan, E.5
Iann, M.C.6
Winder, A.D.7
Reiter, R.8
Wellstein, A.9
Martin, M.B.10
-
24
-
-
0027301384
-
Apoptosis in toremifene-induced growth inhibition of human breast cancer cells in vivo and in vitro
-
Wärri AM, Huovinen RL, Laine AM, Martikainen PM & Harkonen PL 1993 Apoptosis in toremifene-induced growth inhibition of human breast cancer cells in vivo and in vitro. Journal of the National Cancer Institute 85 1412-1418.
-
(1993)
Journal of the National Cancer Institute
, vol.85
, pp. 1412-1418
-
-
Wärri, A.M.1
Huovinen, R.L.2
Laine, A.M.3
Martikainen, P.M.4
Harkonen, P.L.5
-
25
-
-
0348143180
-
A random variance model for detection of differential gene expression in small microarray experiments
-
Wright GW & Simon R 2003 A random variance model for detection of differential gene expression in small microarray experiments. Bioinformatics 19 2448-2455.
-
(2003)
Bioinformatics
, vol.19
, pp. 2448-2455
-
-
Wright, G.W.1
Simon, R.2
-
26
-
-
1342294092
-
Normalization for cDNA microarray data: A robust composite method addressing single and multiple slide systematic variation
-
Yang YH, Dudoit S, Luu P, Lin DM, Peng V, Ngai J & Speed TP 2002 Normalization for cDNA microarray data: a robust composite method addressing single and multiple slide systematic variation. Nucleic Acids Research 3 e15.
-
(2002)
Nucleic Acids Research
, vol.3
-
-
Yang, Y.H.1
Dudoit, S.2
Luu, P.3
Lin, D.M.4
Peng, V.5
Ngai, J.6
Speed, T.P.7
-
27
-
-
24344444819
-
Gene expression patterns and profile changes pre-and post-erlotinib treatment in patients with metastatic breast cancer
-
Yang SX, Simon RM, Tan AR, Nguyen D & Swain SM 2005 Gene expression patterns and profile changes pre-and post-erlotinib treatment in patients with metastatic breast cancer. Clinical Cancer Research 11 6226-6232.
-
(2005)
Clinical Cancer Research
, vol.11
, pp. 6226-6232
-
-
Yang, S.X.1
Simon, R.M.2
Tan, A.R.3
Nguyen, D.4
Swain, S.M.5
|