-
1
-
-
0036303543
-
The Feasibility of Using Fine Needle Aspiration from Primary Breast Cancers for cDNA Microarray Analyses
-
Assersohn L, Gangi L, Zhao Y, Dowsett M, Simon R, Powles TJ, Liu ET: The Feasibility of Using Fine Needle Aspiration from Primary Breast Cancers for cDNA Microarray Analyses Clin Cancer Res 2002, 8: 794-801.
-
(2002)
Clin. Cancer Res.
, vol.8
, pp. 794-801
-
-
Assersohn, L.1
Gangi, L.2
Zhao, Y.3
Dowsett, M.4
Simon, R.5
Powles, T.J.6
Liu, E.T.7
-
2
-
-
0025257556
-
Amplified RNA synthesized from limited quantities of heterogeneous cDNA
-
Van Gelder RN, von Zastrow ME, Yool A, Dement WC, Barchas JD, Eberwine JH: Amplified RNA synthesized from limited quantities of heterogeneous cDNA Proc Natl Acad Sci U S A 1990, 87: 1663-1667.
-
(1990)
Proc. Natl. Acad. Sci. U. S. A.
, vol.87
, pp. 1663-1667
-
-
Van Gelder, R.N.1
von Zastrow, M.E.2
Yool, A.3
Dement, W.C.4
Barchas, J.D.5
Eberwine, J.H.6
-
3
-
-
0034006464
-
High-fidelity mRNA amplification for gene profiling
-
Wang E, Miller LD, Ohnmacht GA, Liu ET, Marincola FM: High-fidelity mRNA amplification for gene profiling Nat Biotechnol 2000, 18: 457-459.
-
(2000)
Nat. Biotechnol.
, vol.18
, pp. 457-459
-
-
Wang, E.1
Miller, L.D.2
Ohnmacht, G.A.3
Liu, E.T.4
Marincola, F.M.5
-
5
-
-
0036713497
-
Representation is faithfully preserved in global cDNA amplified exponentially from sub-picogram quantities of mRNA
-
Iscove NN, Barbara M, Gu M, Gibson M, Modi C, Winegarden N: Representation is faithfully preserved in global cDNA amplified exponentially from sub-picogram quantities of mRNA Nat Biotechnol 2002.
-
(2002)
Nat. Biotechnol.
-
-
Iscove, N.N.1
Barbara, M.2
Gu, M.3
Gibson, M.4
Modi, C.5
Winegarden, N.6
-
6
-
-
0036281003
-
RNA amplification results in reproducible microarray data with slight ratio bias
-
1338, 1336, 1340
-
Puskas LG, Zvara A, Hackler L, Jr., Van Hummelen P: RNA amplification results in reproducible microarray data with slight ratio bias Biotechniques 2002, 32: 1330-1334, 1336, 1338, 1340.
-
(2002)
Biotechniques
, vol.32
, pp. 1330-1334
-
-
Puskas, L.G.1
Zvara, A.2
Hackler Jr., L.3
Van Hummelen, P.4
-
7
-
-
2142822325
-
Expression array technology in the diagnosis and treatment of breast cancer
-
Jeffrey SS, Fero MJ, Borresen-Dale AL, Botstein D: Expression array technology in the diagnosis and treatment of breast cancer Mol Interv 2002, 2: 101-109.
-
(2002)
Mol. Interv.
, vol.2
, pp. 101-109
-
-
Jeffrey, S.S.1
Fero, M.J.2
Borresen-Dale, A.L.3
Botstein, D.4
-
8
-
-
4644260058
-
Optimized RNA amplification using T7-RNA-polymerase based in vitro transcription
-
Moll PR, Duschl J, Richter K: Optimized RNA amplification using T7-RNA-polymerase based in vitro transcription Anal Biochem 2004, 334: 164-174.
-
(2004)
Anal. Biochem.
, vol.334
, pp. 164-174
-
-
Moll, P.R.1
Duschl, J.2
Richter, K.3
-
9
-
-
2442712711
-
Expression microarray reproducibility is improved by optimising purification steps in RNA amplification and labelling
-
Naderi A, Ahmed AA, Barbosa-Morais NL, Aparicio S, Brenton JD, Caldas C: Expression microarray reproducibility is improved by optimising purification steps in RNA amplification and labelling BMC Genomics 2004, 5: 9.
-
(2004)
BMC Genomics
, vol.5
, pp. 9
-
-
Naderi, A.1
Ahmed, A.A.2
Barbosa-Morais, N.L.3
Aparicio, S.4
Brenton, J.D.5
Caldas, C.6
-
10
-
-
0033004736
-
Representative cDNA libraries and their utility in gene expression profiling
-
550
-
Endege WO, Steinmann KE, Boardman LA, Thibodeau SN, Schlegel R: Representative cDNA libraries and their utility in gene expression profiling Biotechniques 1999, 26: 542-548, 550.
-
(1999)
Biotechniques
, vol.26
, pp. 542-548
-
-
Endege, W.O.1
Steinmann, K.E.2
Boardman, L.A.3
Thibodeau, S.N.4
Schlegel, R.5
-
11
-
-
85047692008
-
Amplification of RNA transcripts using terminal continuation
-
Che S, Ginsberg SD: Amplification of RNA transcripts using terminal continuation Lab invest 2004, 84: 131-137.
-
(2004)
Lab. Invest.
, vol.84
, pp. 131-137
-
-
Che, S.1
Ginsberg, S.D.2
-
12
-
-
9444293382
-
Effects of mRNA amplification on gene expression ratios in cDNA experiments estimated by analysis of variance
-
Nygaard V, Loland A, Holden M, Langaas M, Rue H, Liu F, Myklebost O, Fodstad O, Hovig E, Smith-Sorensen B: Effects of mRNA amplification on gene expression ratios in cDNA experiments estimated by analysis of variance BMC Genomics 2003, 4: 11.
-
(2003)
BMC Genomics
, vol.4
, pp. 11
-
-
Nygaard, V.1
Loland, A.2
Holden, M.3
Langaas, M.4
Rue, H.5
Liu, F.6
Myklebost, O.7
Fodstad, O.8
Hovig, E.9
Smith-Sorensen, B.10
-
13
-
-
3042748163
-
Microarray analysis in clinical oncology: Pre-clinical Optimization using needle core biopsies from xenograft tumors
-
Goley EM, Anderson SJ, Menard C, Chuang E, Lu X, Tofilon PJ, Camphausen K: Microarray analysis in clinical oncology: pre-clinical optimization using needle core biopsies from xenograft tumors BMC Cancer 2004, 4: 20.
-
(2004)
BMC Cancer
, vol.4
, pp. 20
-
-
Goley, E.M.1
Anderson, S.J.2
Menard, C.3
Chuang, E.4
Lu, X.5
Tofilon, P.J.6
Camphausen, K.7
-
14
-
-
0033623153
-
Laser capture microdissection-generated target sample for highdensity oligonucleotide array hybridization
-
Ohyama H, Zhang X, Kohno Y, Alevizos I, Posner M, Wong DT, Todd R: Laser capture microdissection-generated target sample for highdensity oligonucleotide array hybridization Biotechniques 2000, 29: 530-536.
-
(2000)
Biotechniques
, vol.29
, pp. 530-536
-
-
Ohyama, H.1
Zhang, X.2
Kohno, Y.3
Alevizos, I.4
Posner, M.5
Wong, D.T.6
Todd, R.7
-
15
-
-
1242338879
-
Evaluation of procedures for amplification of small-size samples for hybridization on microarrays
-
Klur S, Toy K, Williams MP, Certa U: Evaluation of procedures for amplification of small-size samples for hybridization on microarrays Genomics 2004, 83: 508-517.
-
(2004)
Genomics
, vol.83
, pp. 508-517
-
-
Klur, S.1
Toy, K.2
Williams, M.P.3
Certa, U.4
-
16
-
-
1342286839
-
Microdissection, mRNA amplification and microarray: A study of pleural mesothelial and malignant mesothelioma cells
-
Mohr S, Bottin MC, Lannes B, Neuville A, Bellocq JP, Keith G, Rihn BH: Microdissection, mRNA amplification and microarray: a study of pleural mesothelial and malignant mesothelioma cells Biochimie 2004, 86: 13-19.
-
(2004)
Biochimie
, vol.86
, pp. 13-19
-
-
Mohr, S.1
Bottin, M.C.2
Lannes, B.3
Neuville, A.4
Bellocq, J.P.5
Keith, G.6
Rihn, B.H.7
-
17
-
-
0034965544
-
Expression profiling of ductal carcinoma in situ by laser capture microdissection and high-density oligonucleotide arrays
-
Luzzi V, Holtschlag V, Watson MA: Expression profiling of ductal carcinoma in situ by laser capture microdissection and high-density oligonucleotide arrays Am J Pathol 2001, 158: 2005-2010.
-
(2001)
Am. J. Pathol.
, vol.158
, pp. 2005-2010
-
-
Luzzi, V.1
Holtschlag, V.2
Watson, M.A.3
-
18
-
-
0035371760
-
Profiling of gene expression in individual hematopoietic cells by global mRNA amplification and slot blot analysis
-
Theilgaard-Monch K, Cowland J, Borregaard N: Profiling of gene expression in individual hematopoietic cells by global mRNA amplification and slot blot analysis J Immunol Methods 2001, 252: 175-189.
-
(2001)
J. Immunol. Methods
, vol.252
, pp. 175-189
-
-
Theilgaard-Monch, K.1
Cowland, J.2
Borregaard, N.3
-
19
-
-
27644557097
-
Genome-wide estimation of transcript concentrations from spotted cDNA microarray data
-
Frigessi A, van de Wiel MA, Holden M, Svendsrud DH, Glad IK, Lyng H: Genome-wide estimation of transcript concentrations from spotted cDNA microarray data. Nucleic Acids Res 2005.
-
(2005)
Nucleic Acids Res.
-
-
Frigessi, A.1
van de Wiel, M.A.2
Holden, M.3
Svendsrud, D.H.4
Glad, I.K.5
Lyng, H.6
-
20
-
-
4544341015
-
Linear models and emperical bayes methods for assessing differential expression in microarray experiments
-
Article 3
-
Smyth G: Linear models and emperical bayes methods for assessing differential expression in microarray experiments Statistical Applications in Genetics and Molecular Biology 2004, 3: Article 3.
-
(2004)
Statistical Applications in Genetics and Molecular Biology
, vol.3
-
-
Smyth, G.1
-
21
-
-
0037337914
-
Optimized protocol for linear RNA amplification and application to gene expression profiling of human renal biopsies
-
552-544, 556
-
Scherer A, Krause A, Walker JR, Sutton SE, Seron D, Raulf F, Cooke MP: Optimized protocol for linear RNA amplification and application to gene expression profiling of human renal biopsies Biotechniques 2003, 34: 546-550, 552-544, 556.
-
(2003)
Biotechniques
, vol.34
, pp. 546-550
-
-
Scherer, A.1
Krause, A.2
Walker, J.R.3
Sutton, S.E.4
Seron, D.5
Raulf, F.6
Cooke, M.P.7
-
22
-
-
9444231674
-
Amplified RNA degradation in T7-amplification methods results in biased microarray hybridizations
-
Spiess AN, Mueller N, Ivell R: Amplified RNA degradation in T7-amplification methods results in biased microarray hybridizations BMC Genomics 2003, 4: 44.
-
(2003)
BMC Genomics
, vol.4
, pp. 44
-
-
Spiess, A.N.1
Mueller, N.2
Ivell, R.3
-
23
-
-
4043086987
-
Reliability of t7-based mRNA linear amplification validated by gene expression analysis of human kidney cells using cDNA microarrays
-
Rudnicki M, Eder S, Schratzberger G, Mayer B, Meyer TW, Tonko M, Mayer G: Reliability of t7-based mRNA linear amplification validated by gene expression analysis of human kidney cells using cDNA microarrays Nephron Exp Nephrol 2004,97: e86-95.
-
(2004)
Nephron Exp. Nephrol.
, vol.97
-
-
Rudnicki, M.1
Eder, S.2
Schratzberger, G.3
Mayer, B.4
Meyer, T.W.5
Tonko, M.6
Mayer, G.7
-
24
-
-
0942298218
-
High-accuracy amplification of nanogram total RNA amounts for gene profiling
-
Kenzelmann M, Klaren R, Hergenhahn M, Bonrouhi M, Grone HJ, Schmid W, Schutz G: High-accuracy amplification of nanogram total RNA amounts for gene profiling Genomics 2004, 83: 550-558.
-
(2004)
Genomics
, vol.83
, pp. 550-558
-
-
Kenzelmann, M.1
Klaren, R.2
Hergenhahn, M.3
Bonrouhi, M.4
Grone, H.J.5
Schmid, W.6
Schutz, G.7
-
25
-
-
0345732570
-
Systematic comparison of the fidelity of aRNA, mRNA and T-RNA on gene expression profiling using cDNA microarray
-
Li Y, Li T, Liu S, Qiu M, Han Z, Jiang Z, Li R, Ying K, Xie Y, Mao Y: Systematic comparison of the fidelity of aRNA, mRNA and T-RNA on gene expression profiling using cDNA microarray J Biotechnol 2004, 107: 19-28.
-
(2004)
J. Biotechnol.
, vol.107
, pp. 19-28
-
-
Li, Y.1
Li, T.2
Liu, S.3
Qiu, M.4
Han, Z.5
Jiang, Z.6
Li, R.7
Ying, K.8
Xie, Y.9
Mao, Y.10
-
26
-
-
23644439004
-
A robust method for the amplification of RNA in the sense orientation
-
Marko NF, Frank B, Quackenbush J, Lee NH: A robust method for the amplification of RNA in the sense orientation BMC Genomics 2005, 6: 27.
-
(2005)
BMC Genomics
, vol.6
, pp. 27
-
-
Marko, N.F.1
Frank, B.2
Quackenbush, J.3
Lee, N.H.4
-
27
-
-
16244404626
-
Validation and application of a high fidelity mRNA linear amplification procedure for profiling gene expression
-
Patel OV, Suchyta SP, Sipkovsky SS, Yao J, Ireland JJ, Coussens PM, Smith GW: Validation and application of a high fidelity mRNA linear amplification procedure for profiling gene expression Vet Immunol Immunopathol 2005, 105: 331-342.
-
(2005)
Vet. Immunol. Immunopathol.
, vol.105
, pp. 331-342
-
-
Patel, O.V.1
Suchyta, S.P.2
Sipkovsky, S.S.3
Yao, J.4
Ireland, J.J.5
Coussens, P.M.6
Smith, G.W.7
-
28
-
-
2442694094
-
A comparative analysis of data generated using two different target preparation methods for hybridization to high-density oligonucleotide microarrays
-
Gold D, Coombes K, Medhane D, Ramaswamy A, Ju Z, Strong L, Koo JS, Kapoor M: A comparative analysis of data generated using two different target preparation methods for hybridization to high-density oligonucleotide microarrays BMC Genomics 2004, 5: 2.
-
(2004)
BMC Genomics
, vol.5
, pp. 2
-
-
Gold, D.1
Coombes, K.2
Medhane, D.3
Ramaswamy, A.4
Ju, Z.5
Strong, L.6
Koo, J.S.7
Kapoor, M.8
-
29
-
-
9444265265
-
Obtaining reliable information from minute amounts of RNA using cDNA microarrays
-
Hu L, Wang J, Baggerly K, Wang H, Fuller GN, Hamilton SR, Coombes KR, Zhang W: Obtaining reliable information from minute amounts of RNA using cDNA microarrays BMC Genomics 2002, 3: 16.
-
(2002)
BMC Genomics
, vol.3
, pp. 16
-
-
Hu, L.1
Wang, J.2
Baggerly, K.3
Wang, H.4
Fuller, G.N.5
Hamilton, S.R.6
Coombes, K.R.7
Zhang, W.8
-
30
-
-
14644386823
-
Reproducibility, fidelity, and discriminant validity of mRNA amplification for microarray analysis from primary hematopoietic cells
-
Li L, Roden J, Shapiro BE, Wold BJ, Bhatia S, Forman SJ, Bhatia R: Reproducibility, fidelity, and discriminant validity of mRNA amplification for microarray analysis from primary hematopoietic cells J Mol Diagn 2005, 7: 48-56.
-
(2005)
J. Mol. Diagn.
, vol.7
, pp. 48-56
-
-
Li, L.1
Roden, J.2
Shapiro, B.E.3
Wold, B.J.4
Bhatia, S.5
Forman, S.J.6
Bhatia, R.7
-
31
-
-
26444612181
-
Effective transcriptome amplification for expression profiling on sense-oriented oligonucleotide microarrays
-
Schlingemann J, Thuerigen O, Ittrich C, Toedt G, Kramer H, Hahn M, Lichter P: Effective transcriptome amplification for expression profiling on sense-oriented oligonucleotide microarrays Nucleic Acids Res 2005, 33: e29.
-
(2005)
Nucleic Acids Res.
, vol.33
-
-
Schlingemann, J.1
Thuerigen, O.2
Ittrich, C.3
Toedt, G.4
Kramer, H.5
Hahn, M.6
Lichter, P.7
-
32
-
-
0003880161
-
-
3rd ed. Garland Publishing, Inc., New York
-
Alberts B, Bray D, Lewis J, Raff M, Roberts K, Watson JD. (1994) Molecular Biology of the Cell. 3rd ed. Garland Publishing, Inc., New York.
-
(1994)
Molecular Biology of the Cell
-
-
Alberts, B.1
Bray, D.2
Lewis, J.3
Raff, M.4
Roberts, K.5
Watson, J.D.6
-
33
-
-
0032706622
-
Analysis of human transcriptomes
-
Velculescu VE, Madden SL, Zhang L, Lash AE, Yu J, Rago C, Lal A, Wang CJ, Beaudry GA, Ciriello KM, Cook BP, Dufault MR, Ferguson AT, Gao Y, He TC, Hermeking H, Hiraldo SK, Hwang PM, Lopez MA, Luderer HF, Mathews B, Petroziello JM, Polyak K, Zawel L, Zhang W, Zhang X, Zhou W, Haluska FG, Jen J, Sukumar S, Landes GM, Riggins GJ, Vogelstein B, Kinzler KW: Analysis of human transcriptomes Nat Genet 1999, 23: 387-388.
-
(1999)
Nat. Genet.
, vol.23
, pp. 387-388
-
-
Velculescu, V.E.1
Madden, S.L.2
Zhang, L.3
Lash, A.E.4
Yu, J.5
Rago, C.6
Lal, A.7
Wang, C.J.8
Beaudry, G.A.9
Ciriello, K.M.10
Cook, B.P.11
Dufault, M.R.12
Ferguson, A.T.13
Gao, Y.14
He, T.C.15
Hermeking, H.16
Hiraldo, S.K.17
Hwang, P.M.18
Lopez, M.A.19
Luderer, H.F.20
Mathews, B.21
Petroziello, J.M.22
Polyak, K.23
Zawel, L.24
Zhang, W.25
Zhang, X.26
Zhou, W.27
Haluska, F.G.28
Jen, J.29
Sukumar, S.30
Landes, G.M.31
Riggins, G.J.32
Vogelstein, B.33
Kinzler, K.W.34
more..
-
34
-
-
0036124318
-
mRNA expression profiling of laser microbeam microdissected cells from slender embryonic structures
-
Scheidl SJ, Nilsson S, Kalen M, Hellstrom M, Takemoto M, Hakansson J, Lindahl P: mRNA expression profiling of laser microbeam microdissected cells from slender embryonic structures Am J Pathol 2002, 160: 801-813.
-
(2002)
Am. J. Pathol.
, vol.160
, pp. 801-813
-
-
Scheidl, S.J.1
Nilsson, S.2
Kalen, M.3
Hellstrom, M.4
Takemoto, M.5
Hakansson, J.6
Lindahl, P.7
-
35
-
-
0034758994
-
Accuracy in amplification
-
35 Stenman J, Orpana A: Accuracy in amplification Nat Biotechnol 2001, 19: 1011-1012.
-
(2001)
Nat. Biotechnol.
, vol.19
, pp. 1011-1012
-
-
Stenman, J.1
Orpana, A.2
-
36
-
-
0037227021
-
Quantitative detection of low-copy-number mRNAs differing at single nucleotide positions
-
Stenman J, Lintula S, Rissanen O, Finne P, Hedstrom J, Palotie A, Orpana A: Quantitative detection of low-copy-number mRNAs differing at single nucleotide positions Biotechniques 2003, 34: 172-177.
-
(2003)
Biotechniques
, vol.34
, pp. 172-177
-
-
Stenman, J.1
Lintula, S.2
Rissanen, O.3
Finne, P.4
Hedstrom, J.5
Palotie, A.6
Orpana, A.7
-
37
-
-
0028999769
-
In situ isolation of mRNA from individual plant cells: Creation of Cell-specific cDNA libraries
-
Karrer EE, Lincoln JE, Hogenhout S, Bennett AB, Bostock RM, Martineau B, Lucas WJ, Gilchrist DG, Alexander D: In situ isolation of mRNA from individual plant cells: creation of cell-specific cDNA libraries Proc Natl Acad Sci U S A 1995, 92: 3814-3818.
-
(1995)
Proc. Natl. Acad. Sci. U. S. A.
, vol.92
, pp. 3814-3818
-
-
Karrer, E.E.1
Lincoln, J.E.2
Hogenhout, S.3
Bennett, A.B.4
Bostock, R.M.5
Martineau, B.6
Lucas, W.J.7
Gilchrist, D.G.8
Alexander, D.9
-
38
-
-
12344315892
-
A rapid method for computationally inferring transcriptome coverage and microarray sensitivity
-
Reverter A, McWilliam SM, Barris W, Dalrymple BP: A rapid method for computationally inferring transcriptome coverage and microarray sensitivity Bioinformatics 2005, 21: 80-89.
-
(2005)
Bioinformatics
, vol.21
, pp. 80-89
-
-
Reverter, A.1
McWilliam, S.M.2
Barris, W.3
Dalrymple, B.P.4
-
39
-
-
0038702458
-
Single-cell transcriptional analysis of neuronal progenitors
-
Tietjen I, Rihel JM, Cao Y, Koentges G, Zakhary L, Dulac C: Single-cell transcriptional analysis of neuronal progenitors Neuron 2003, 38: 161-175.
-
(2003)
Neuron
, vol.38
, pp. 161-175
-
-
Tietjen, I.1
Rihel, J.M.2
Cao, Y.3
Koentges, G.4
Zakhary, L.5
Dulac, C.6
-
40
-
-
0346130924
-
Gene expression analysis using single molecule detection
-
Korn K, Gardellin P, Liao B, Amacker M, Bergstrom A, Bjorkman H, Camacho A, Dorhofer S, Dorre K, Enstrom J, Ericson T, Favez T, Gosch M, Honegger A, Jaccoud S, Lapczyna M, Litborn E, Thyberg P, Winter H, Rigler R: Gene expression analysis using single molecule detection Nucleic Acids Res 2003, 31: e89.
-
(2003)
Nucleic Acids Res.
, vol.31
-
-
Korn, K.1
Gardellin, P.2
Liao, B.3
Amacker, M.4
Bergstrom, A.5
Bjorkman, H.6
Camacho, A.7
Dorhofer, S.8
Dorre, K.9
Enstrom, J.10
Ericson, T.11
Favez, T.12
Gosch, M.13
Honegger, A.14
Jaccoud, S.15
Lapczyna, M.16
Litborn, E.17
Thyberg, P.18
Winter, H.19
Rigler, R.20
more..
-
41
-
-
0032113394
-
Expression measurement of many genes simultaneously by quantitative RT-PCR using standardized mixtures of competitive templates
-
Willey JC, Crawford EL, Jackson CM, Weaver DA, Hoban JC, Khuder SA, DeMuth JP: Expression measurement of many genes simultaneously by quantitative RT-PCR using standardized mixtures of competitive templates Am J Respir Cell Mol Biol 1998, 19: 6-17.
-
(1998)
Am. J. Respir. Cell Mol. Biol.
, vol.19
, pp. 6-17
-
-
Willey, J.C.1
Crawford, E.L.2
Jackson, C.M.3
Weaver, D.A.4
Hoban, J.C.5
Khuder, S.A.6
DeMuth, J.P.7
-
42
-
-
27744526131
-
The ProbeLibraryTM - Expression profiling 99% of all human genes using only 90 dual-labeled real-time PCR probes
-
Mouritzen P, Nielsen PS, Jacobsen N, Noerholm M, Lomholt C, Pfundheller HM, Ramsig NB, Kauppinen S, Tolstrup N: The ProbeLibraryTM - Expression profiling 99% of all human genes using only 90 dual-labeled real-time PCR probes Biotechniques 2004, 37: 492-495.
-
(2004)
Biotechniques
, vol.37
, pp. 492-495
-
-
Mouritzen, P.1
Nielsen, P.S.2
Jacobsen, N.3
Noerholm, M.4
Lomholt, C.5
Pfundheller, H.M.6
Ramsig, N.B.7
Kauppinen, S.8
Tolstrup, N.9
-
43
-
-
0028789793
-
Serial analysis of gene expression
-
Velculescu VE, Zhang L, Vogelstein B, Kinzler KW: Serial analysis of gene expression Science 1995, 270: 484-487.
-
(1995)
Science
, vol.270
, pp. 484-487
-
-
Velculescu, V.E.1
Zhang, L.2
Vogelstein, B.3
Kinzler, K.W.4
-
44
-
-
0034130561
-
Gene expression analysis by massively parallel signature sequencing (MPSS) on microbead arrays
-
Brenner S, Johnson M, Bridgham J, Golda G, Lloyd DH, Johnson D, Luo S, McCurdy S, Foy M, Ewan M, Roth R, George D, Eletr S, Albrecht G, Vermaas E, Williams SR, Moon K, Burcham T, Pallas M, DuBridge RB, Kirchner J, Fearon K, Mao J, Corcoran K: Gene expression analysis by massively parallel signature sequencing (MPSS) on microbead arrays Nat Biotechnol 2000, 18: 630-634.
-
(2000)
Nat. Biotechnol.
, vol.18
, pp. 630-634
-
-
Brenner, S.1
Johnson, M.2
Bridgham, J.3
Golda, G.4
Lloyd, D.H.5
Johnson, D.6
Luo, S.7
McCurdy, S.8
Foy, M.9
Ewan, M.10
Roth, R.11
George, D.12
Eletr, S.13
Albrecht, G.14
Vermaas, E.15
Williams, S.R.16
Moon, K.17
Burcham, T.18
Pallas, M.19
DuBridge, R.B.20
Kirchner, J.21
Fearon, K.22
Mao, J.23
Corcoran, K.24
more..
-
45
-
-
0037119587
-
Stochastic gene expression in a single cell
-
Elowitz MB, Levine AJ, Siggia ED, Swain PS: Stochastic gene expression in a single cell Science 2002, 297: 1183-1186.
-
(2002)
Science
, vol.297
, pp. 1183-1186
-
-
Elowitz, M.B.1
Levine, A.J.2
Siggia, E.D.3
Swain, P.S.4
-
46
-
-
27744533850
-
-
The Norwegian Radium Hospital Microarray Core Facility
-
The Norwegian Radium Hospital Microarray Core Facility http:// www.med.uio.no/dnr/microarray/index.html.
-
-
-
-
47
-
-
1342294092
-
Normalization for cDNA microarray data: A robust composite method addressing single and multiple slide systematic variation
-
Yang YH, Dudoit S, Luu P, Lin DM, Peng V, Ngai J, Speed TP: Normalization for cDNA microarray data: a robust composite method addressing single and multiple slide systematic variation Nucleic Acids Res 2002, 30: e15.
-
(2002)
Nucleic Acids Res.
, vol.30
-
-
Yang, Y.H.1
Dudoit, S.2
Luu, P.3
Lin, D.M.4
Peng, V.5
Ngai, J.6
Speed, T.P.7
-
48
-
-
25144456446
-
Estimating the portion of true null hypotheses, with application to DNA microarray data
-
Langaas M, Lindqvist BH, Ferkingstad E: Estimating the portion of true null hypotheses, with application to DNA microarray data J Royal Statistical Soc Series B 2005, 67: 555-572.
-
(2005)
J. Royal Statistical Soc. Series B
, vol.67
, pp. 555-572
-
-
Langaas, M.1
Lindqvist, B.H.2
Ferkingstad, E.3
-
49
-
-
0001677717
-
Controlling the false discovery rate: A practical and powerful approach to multiple testing
-
Benjamini Y, Hochberg Y: Controlling the false discovery rate: a practical and powerful approach to multiple testing. JRSS 1995, 57: 289-300.
-
(1995)
JRSS
, vol.57
, pp. 289-300
-
-
Benjamini, Y.1
Hochberg, Y.2
-
50
-
-
28744458859
-
Bioconductor: Open software development for computational biology and bioinformatics
-
Gentleman RC, Carey VJ, Bates DM, Bolstad B, Dettling M, Dudoit S, Ellis B, Gautier L, Ge Y, Gentry J, Hornik K, Hothorn T, Huber W, Iacus S, Irizarry R, Leisch F, Li C, Maechler M, Rossini AJ, Sawitzki G, Smith C, Smyth G, Tierney L, Yang JY, Zhang J: Bioconductor: open software development for computational biology and bioinformatics Genome Biol 2004, 5: R80.
-
(2004)
Genome Biol.
, vol.5
-
-
Gentleman, R.C.1
Carey, V.J.2
Bates, D.M.3
Bolstad, B.4
Dettling, M.5
Dudoit, S.6
Ellis, B.7
Gautier, L.8
Ge, Y.9
Gentry, J.10
Hornik, K.11
Hothorn, T.12
Huber, W.13
Iacus, S.14
Irizarry, R.15
Leisch, F.16
Li, C.17
Maechler, M.18
Rossini, A.J.19
Sawitzki, G.20
Smith, C.21
Smyth, G.22
Tierney, L.23
Yang, J.Y.24
Zhang, J.25
more..
-
51
-
-
0034927555
-
Analysis of variance for gene expression microarray data
-
Kerr MK, Martin M, Churchill GA: Analysis of variance for gene expression microarray data J Comput Biol 2000, 7: 819-837.
-
(2000)
J. Comput. Biol.
, vol.7
, pp. 819-837
-
-
Kerr, M.K.1
Martin, M.2
Churchill, G.A.3
-
52
-
-
0035687554
-
Assessing gene significance from cDNA microarray expression data via mixed models
-
Wolfinger RD, Gibson G, Wolfinger ED, Bennett L, Hamadeh H, Bushel P, Afshari C, Paules RS: Assessing gene significance from cDNA microarray expression data via mixed models J Comput Biol 2001, 8: 625-637.
-
(2001)
J. Comput. Biol.
, vol.8
, pp. 625-637
-
-
Wolfinger, R.D.1
Gibson, G.2
Wolfinger, E.D.3
Bennett, L.4
Hamadeh, H.5
Bushel, P.6
Afshari, C.7
Paules, R.S.8
-
53
-
-
0035733752
-
The contributions of sex, genotype and age to transcriptional variance in Drosophila melanogaster
-
Jin W, Riley RM, Wolfinger RD, White KP, Passador-Gurgel G, Gibson G: The contributions of sex, genotype and age to transcriptional variance in Drosophila melanogaster Nat Genet 2001, 29: 389-395.
-
(2001)
Nat. Genet.
, vol.29
, pp. 389-395
-
-
Jin, W.1
Riley, R.M.2
Wolfinger, R.D.3
White, K.P.4
Passador-Gurgel, G.5
Gibson, G.6
-
54
-
-
27744465713
-
Glme: A C-program for parameter estimation using Gibbs-sampling in large linear mixdeffects models, with applications to DNA microarray data
-
Research Report NO.2/2004 Norwegian Computing Center
-
Follestad T, Langaas M, Rue H, Holden M, Losland A: glme: a C-program for parameter estimation using Gibbs-sampling in large linear mixdeffects models, with applications to DNA microarray data. Research Report NO.2/2004 Norwegian Computing Center 2004, 1-20.
-
(2004)
, pp. 1-20
-
-
Follestad, T.1
Langaas, M.2
Rue, H.3
Holden, M.4
Losland, A.5
|