Algorithm for in vitro diagnostic multivariate index assay

Breast Cancer

Volumn 16, Issue 4, 2009, Pages 248-251

  Kato, Kikuya ^a  

^a OSAKA MEDICAL CENTER FOR CANCER AND CARDIOVASCULAR DISEASES   (Japan)

Author keywords

Gene expression profiling; Linear classifier; Prognostic factor

Indexed keywords

BREAST CANCER; CONFERENCE PAPER; DIAGNOSTIC PROCEDURE; FOOD AND DRUG ADMINISTRATION; GENE EXPRESSION; GENE EXPRESSION PROFILING; IN VITRO STUDY; MATHEMATICAL MODEL; PRIORITY JOURNAL; PROGNOSIS; SCORING SYSTEM;

ALGORITHMS; BREAST NEOPLASMS; FEMALE; GENE EXPRESSION PROFILING; HUMANS; MOLECULAR DIAGNOSTIC TECHNIQUES;

EID: 70349671243     PISSN: 13406868     EISSN: None     Source Type: Journal    
DOI: 10.1007/s12282-009-0141-9     Document Type: Conference Paper

References (16)

1. LJ van't Veer H Dai MJ van de Vijver YD He AA Hart M Mao HL Peterse, et al. 2002 Gene expression profiling predicts clinical outcome of breast cancer Nature 415 530 536 10.1038/415530a (Pubitemid 34130608)
2. MJ van de Vijver YD He LJ van't Veer H Dai AA Hart DW Voskuil GJ Schreiber, et al. 2002 A gene-expression signature as a predictor of survival in breast cancer N Engl J Med 347 1999 2009 12490681 10.1056/NEJMoa021967 (Pubitemid 35461656)
3. S Paik S Shak G Tang C Kim J Baker M Cronin FL Baehner, et al. 2004 A multigene assay to predict recurrence of tamoxifen-treated, node-negative breast cancer N Engl J Med 351 2817 2826 15591335 10.1056/NEJMoa041588 1:CAS:528:DC%2BD2MXhslymsw%3D%3D (Pubitemid 40051905)
4. A Dupuy RM Simon 2007 Critical review of published microarray studies for cancer outcome and guidelines on statistical analysis and reporting J Natl Cancer Inst 99 147 157 17227998 10.1093/jnci/djk018
5. K Kato S Ishii 2003 Statistical analysis of gene expression profiles Tanpakushitsu Kakusan Koso 48 2300 2309 14661588 1:CAS:528:DC%2BD3sXptl2js7k%3D
6. TR Golub DK Slonim P Tamayo C Huard M Gaasenbeek JP Mesirov H Coller, et al. 1999 Molecular classification of cancer: class discovery and class prediction by gene expression monitoring Science 286 531 537 10521349 10.1126/science.286.5439.531 1:CAS:528:DyaK1MXmvVOhu7g%3D
7. Hastie T, Tibshirani R, Friedman J. The elements of statistical learning; data mining, inference and prediction. New York: Springer; 2001.
8. J Khan JS Wei M Ringner LH Saal M Ladanyi F Westermann F Berthold, et al. 2001 Classification and diagnostic prediction of cancers using gene expression profiling and artificial neural networks Nat Med 7 673 679 11385503 10.1038/89044 1:CAS:528:DC%2BD3MXktlGkurk%3D (Pubitemid 32588022)
9. EF Petricoin AM Ardekani BA Hitt PJ Levine VA Fusaro SM Steinberg GB Mills, et al. 2002 Use of proteomic patterns in serum to identify ovarian cancer Lancet 359 572 577 11867112 10.1016/S0140-6736(02)07746-2 1:CAS:528: DC%2BD38XhsFansbw%3D (Pubitemid 34178440)
10. RF Service 2008 Proteomics. Will biomarkers take off at last? Science 321 1760 18818333 10.1126/science.321.5897.1760
11. RF Service 2008 Proteomics. Proteomics ponders prime time Science 321 1758 1761 18818332 10.1126/science.321.5897.1758 1:CAS:528:DC%2BD1cXhtF2it7jK
12. JC Chang EC Wooten A Tsimelzon SG Hilsenbeck MC Gutierrez R Elledge S Mohsin, et al. 2003 Gene expression profiling for the prediction of therapeutic response to docetaxel in patients with breast cancer Lancet 362 362 369 12907009 10.1016/S0140-6736(03)14023-8 1:CAS:528:DC%2BD3sXlvFGnsLo%3D (Pubitemid 36957839)
13. K Iwao-Koizumi R Matoba N Ueno SJ Kim A Ando Y Miyoshi E Maeda, et al. 2005 Prediction of docetaxel response in human breast cancer by gene expression profiling J Clin Oncol 23 422 431 15659489 10.1200/JCO.2005.09.078 1:CAS:528:DC%2BD2MXitVarsbw%3D (Pubitemid 46224217)
14. KR Hess K Anderson WF Symmans V Valero N Ibrahim JA Mejia D Booser, et al. 2006 Pharmacogenomic predictor of sensitivity to preoperative chemotherapy with paclitaxel and fluorouracil, doxorubicin, and cyclophosphamide in breast cancer J Clin Oncol 24 4236 4244 16896004 10.1200/JCO.2006.05.6861 1:CAS:528:DC%2BD28XhtVGju7vJ (Pubitemid 46630780)
15. M Shirahata K Iwao-Koizumi S Saito N Ueno M Oda N Hashimoto JA Takahashi, et al. 2007 Gene expression-based molecular diagnostic system for malignant gliomas is superior to histological diagnosis Clin Cancer Res 13 7341 7356 18094416 10.1158/1078-0432.CCR-06-2789 1:CAS:528:DC%2BD2sXhsVCktrzK
16. Shirahata M, Oba S, Iwao-Koizumi K, Saito S, Ueno N, Oda M, Hashimoto N, et al. Using gene expression profiling to identify a prognostic molecular spectrum in gliomas. Cancer Sci. 2009;100:165-72.