메뉴 건너뛰기




Volumn 105, Issue 2, 2010, Pages 317-329

Metabolic flux analysis for recombinant protein production by Pichia pastoris using dual carbon sources: Effects of methanol feeding rate

Author keywords

Fed batch; Flux; Metabolism; Methanol; Pichia pastoris; Sorbitol

Indexed keywords

ASSIMILATORY PATHWAYS; BIOPROCESSES; CARBON SOURCE; CELL METABOLISM; DILUTION RATE; FED BATCHES; FED-BATCH; FED-BATCH OPERATION; FEEDING RATE; GLUCONEOGENESIS; HUMAN ERYTHROPOIETIN; METABOLIC EFFECTS; METABOLIC FLUX; METABOLIC FLUX ANALYSIS; METHANOL FEED; P. PASTORIS; PICHIA PASTORIS; RECOMBINANT PROTEIN PRODUCTIONS; SPECIFIC GROWTH RATE; TCA CYCLE;

EID: 74849113944     PISSN: 00063592     EISSN: 10970290     Source Type: Journal    
DOI: 10.1002/bit.22543     Document Type: Article
Times cited : (60)

References (40)
  • 1
    • 34249297627 scopus 로고    scopus 로고
    • Metabolic flux analysis in a nonstationary system: Fed-batch fermentation of a high yielding strain of E. coli producing 1,3-propanediol
    • Antoniewicz MR, Kraynie DF, Laffend LA, Gonzalez-Lergier J, Kelleher JK, Stephanopoulos G. 2007. Metabolic flux analysis in a nonstationary system: Fed-batch fermentation of a high yielding strain of E. coli producing 1,3-propanediol. Metab Eng 9:277-292.
    • (2007) Metab Eng , vol.9 , pp. 277-292
    • Antoniewicz, M.R.1    Kraynie, D.F.2    Laffend, L.A.3    Gonzalez-Lergier, J.4    Kelleher, J.K.5    Stephanopoulos, G.6
  • 2
    • 0020382853 scopus 로고
    • A simple colorimetric method for detecting cell viability in cultures of eukaryotic microorganisms
    • Bonora A, Mares D. 1982. A simple colorimetric method for detecting cell viability in cultures of eukaryotic microorganisms. Curr Microbiol 7:217-222.
    • (1982) Curr Microbiol , vol.7 , pp. 217-222
    • Bonora, A.1    Mares, D.2
  • 3
    • 0017184389 scopus 로고
    • A rapid and sensitive for the quantitation of microgram quantities of protein utilizing the principle of protein dye binding
    • Bradford MM. 1976. A rapid and sensitive for the quantitation of microgram quantities of protein utilizing the principle of protein dye binding. Anal Biochem 72:248-254.
    • (1976) Anal Biochem , vol.72 , pp. 248-254
    • Bradford, M.M.1
  • 4
    • 0025168284 scopus 로고
    • Fermentation development of recombinant Pichia pastoris expressing the heterologous gene: Bovine lysozyme
    • Brierley RA, Bussineau C, Kosson R, Melton A, Siegel RS. 1990. Fermentation development of recombinant Pichia pastoris expressing the heterologous gene: Bovine lysozyme. Ann NY Acad Sci 589:350-362.
    • (1990) Ann NY Acad Sci , vol.589 , pp. 350-362
    • Brierley, R.A.1    Bussineau, C.2    Kosson, R.3    Melton, A.4    Siegel, R.S.5
  • 5
    • 0032921045 scopus 로고    scopus 로고
    • Mass flux balance-based model and metabolic pathway analysis for serine alkaline protease synthesis by Bacillus licheniformis
    • Çalik P, Özdamar TH. 1999. Mass flux balance-based model and metabolic pathway analysis for serine alkaline protease synthesis by Bacillus licheniformis. Enzyme Microb Tech 24:621-635.
    • (1999) Enzyme Microb Tech , vol.24 , pp. 621-635
    • Çalik, P.1    Özdamar, T.H.2
  • 6
    • 0036356136 scopus 로고    scopus 로고
    • Bioreaction network flux analysis for industrial microorganisms: A review
    • Çalik P, Özdamar TH. 2002a. Bioreaction network flux analysis for industrial microorganisms: A review. Rev Chem Eng 18:553-596.
    • (2002) Rev Chem Eng , vol.18 , pp. 553-596
    • Çalik, P.1    Özdamar, T.H.2
  • 7
    • 0036256390 scopus 로고    scopus 로고
    • Metabolic flux analysis for human therapeutic protein productions and hypothesis for new therapeutical strategies in medicine
    • Çalik P, Özdamar TH. 2002b. Metabolic flux analysis for human therapeutic protein productions and hypothesis for new therapeutical strategies in medicine. Biochem Eng J 11:49-68.
    • (2002) Biochem Eng J , vol.11 , pp. 49-68
    • Çalik, P.1    Özdamar, T.H.2
  • 8
    • 0345628615 scopus 로고    scopus 로고
    • Oxygen transfer effects in serine alkaline protease fermentation by Bacillus licheniformis: Use of citric acid as the carbon source
    • Çalik P, Çalik G, Özdamar TH. 1998. Oxygen transfer effects in serine alkaline protease fermentation by Bacillus licheniformis: Use of citric acid as the carbon source. Enzyme Microb Tech 23:451-461.
    • (1998) Enzyme Microb Tech , vol.23 , pp. 451-461
    • Çalik, P.1    Çalik, G.2    Özdamar, T.H.3
  • 9
    • 0033587790 scopus 로고    scopus 로고
    • Metabolic flux analysis for serine alkaline protease fermentation by Bacillus licheniformis in a defined medium: Effects of the oxygen transfer rate
    • Çalik P, Çalik G, Takaç S, Özdamar TH. 1999. Metabolic flux analysis for serine alkaline protease fermentation by Bacillus licheniformis in a defined medium: Effects of the oxygen transfer rate. Biotechnol Bioeng 64:151-167.
    • (1999) Biotechnol Bioeng , vol.64 , pp. 151-167
    • Çalik, P.1    Çalik, G.2    Takaç, S.3    Özdamar, T.H.4
  • 10
    • 36549023117 scopus 로고    scopus 로고
    • Production of recombinant human erythropoietin from Pichia pastoris and its structural analysis
    • Çelik E, Çalik P, Halloran SM, Oliver SG. 2007. Production of recombinant human erythropoietin from Pichia pastoris and its structural analysis. J Appl Microbiol 103:2084-2094.
    • (2007) J Appl Microbiol , vol.103 , pp. 2084-2094
    • Çelik, E.1    Çalik, P.2    Halloran, S.M.3    Oliver, S.G.4
  • 11
    • 44349187955 scopus 로고    scopus 로고
    • Use of biodiesel by-product crude glycerol as the carbon source for fermentation processes by recombinant Pichia pastoris
    • Çelik E, Özbay N, Oktar N, Çalik P. 2008. Use of biodiesel by-product crude glycerol as the carbon source for fermentation processes by recombinant Pichia pastoris. Ind Eng Chem Res 47:2985-2990.
    • (2008) Ind Eng Chem Res , vol.47 , pp. 2985-2990
    • Çelik, E.1    Özbay, N.2    Oktar, N.3    Çalik, P.4
  • 12
    • 70349897510 scopus 로고    scopus 로고
    • Fed-batch methanol feeding strategy for recombinant protein production by Pichia pastoris in the presence of co-substrate sorbitol
    • Çelik E, Çalik P, Oliver SG. 2009. Fed-batch methanol feeding strategy for recombinant protein production by Pichia pastoris in the presence of co-substrate sorbitol. Yeast 26:473-484.
    • (2009) Yeast , vol.26 , pp. 473-484
    • Çelik, E.1    Çalik, P.2    Oliver, S.G.3
  • 13
    • 0033955337 scopus 로고    scopus 로고
    • Heterologous protein expression in the methylotrophic yeast Pichia pastoris
    • Cereghino JL, Cregg JM. 2000. Heterologous protein expression in the methylotrophic yeast Pichia pastoris. FEMS Microb Rev 24:45-66.
    • (2000) FEMS Microb Rev , vol.24 , pp. 45-66
    • Cereghino, J.L.1    Cregg, J.M.2
  • 14
    • 0028430975 scopus 로고
    • Intracellular expression of Vitreoscilla hemoglobin alters the aerobic metabolism of Saccharomyces cerevisiae
    • Chen W, Hughes DE, Bailey JE. 1994. Intracellular expression of Vitreoscilla hemoglobin alters the aerobic metabolism of Saccharomyces cerevisiae. Biotechnol Prog 10:308-313.
    • (1994) Biotechnol Prog , vol.10 , pp. 308-313
    • Chen, W.1    Hughes, D.E.2    Bailey, J.E.3
  • 17
    • 0037200931 scopus 로고    scopus 로고
    • A functional genomics approach using metabolomics and in silico pathway analysis
    • Förster J, Gombert AK, Nielsen J. 2002. A functional genomics approach using metabolomics and in silico pathway analysis. Biotechnol Bioeng 79:703-712.
    • (2002) Biotechnol Bioeng , vol.79 , pp. 703-712
    • Förster, J.1    Gombert, A.K.2    Nielsen, J.3
  • 18
    • 0037313750 scopus 로고    scopus 로고
    • Genome-scale reconstruction of the Saccharomyces cerevisiae metabolic network
    • Förster J, Famili I, Fu P, Palson BO, Nielsen J. 2003. Genome-scale reconstruction of the Saccharomyces cerevisiae metabolic network. Genome Res 13:244-253.
    • (2003) Genome Res , vol.13 , pp. 244-253
    • Förster, J.1    Famili, I.2    Fu, P.3    Palson, B.O.4    Nielsen, J.5
  • 19
    • 0037457492 scopus 로고    scopus 로고
    • Metabolic analysis of the synthesis of high levels of intracellular human SOD in Saccharomyces cerevisiae rhSOD 2060 411 SGA122
    • Gonzalez R, Andrews BA, Molitor J, Asenjo JA. 2003. Metabolic analysis of the synthesis of high levels of intracellular human SOD in Saccharomyces cerevisiae rhSOD 2060 411 SGA122. Biotechnol Bioeng 82:152-169.
    • (2003) Biotechnol Bioeng , vol.82 , pp. 152-169
    • Gonzalez, R.1    Andrews, B.A.2    Molitor, J.3    Asenjo, J.A.4
  • 20
    • 0035921173 scopus 로고    scopus 로고
    • Analysis of single chain antibody production in Pichia pastoris using on-line methanol control in fed-batch and mixed-feed fermentation
    • Hellwig S, Emde F, Raven NPG, Henke M, Van der Logt P, Fischer R. 2001. Analysis of single chain antibody production in Pichia pastoris using on-line methanol control in fed-batch and mixed-feed fermentation. Biotechnol Bioeng 74:344-352.
    • (2001) Biotechnol Bioeng , vol.74 , pp. 344-352
    • Hellwig, S.1    Emde, F.2    Raven, N.P.G.3    Henke, M.4    Van der Logt, P.5    Fischer, R.6
  • 21
    • 33646049350 scopus 로고    scopus 로고
    • Effects of pH strategy on endo- and exo-metabolome profiles and sodium potassium hydrogen ports of beta-lactamase producing Bacillus licheniformis
    • İleri N, Çalik P. 2006. Effects of pH strategy on endo- and exo-metabolome profiles and sodium potassium hydrogen ports of beta-lactamase producing Bacillus licheniformis. Biotechnol Prog 22:411-419.
    • (2006) Biotechnol Prog , vol.22 , pp. 411-419
    • İleri, N.1    Çalik, P.2
  • 22
    • 0035703883 scopus 로고    scopus 로고
    • Non-repressing carbon sources for alcohol oxidase (AOX1) promoter of Pichia pastoris
    • Inan M, Meagher MM. 2001. Non-repressing carbon sources for alcohol oxidase (AOX1) promoter of Pichia pastoris. J Biosci Bioeng 92:585-589.
    • (2001) J Biosci Bioeng , vol.92 , pp. 585-589
    • Inan, M.1    Meagher, M.M.2
  • 23
    • 0029278153 scopus 로고
    • Metabolic flux distributions in Penicillium chrysogenum during fed-batch cultivations
    • Jorgensen H, Nielsen J, Villadsen J, Mollgaard H. 1995. Metabolic flux distributions in Penicillium chrysogenum during fed-batch cultivations. Biotechnol Bioeng 46:117-131.
    • (1995) Biotechnol Bioeng , vol.46 , pp. 117-131
    • Jorgensen, H.1    Nielsen, J.2    Villadsen, J.3    Mollgaard, H.4
  • 24
    • 34447292394 scopus 로고    scopus 로고
    • A quantitative analysis of the benefits of mixed feeds of sorbitol and methanol for the production of recombinant avidin with Pichia pastoris
    • Jungo C, Schenk J, Pasquier M, Marison IW, von Stockar U. 2007. A quantitative analysis of the benefits of mixed feeds of sorbitol and methanol for the production of recombinant avidin with Pichia pastoris. J Biotechnol 131:57-66.
    • (2007) J Biotechnol , vol.131 , pp. 57-66
    • Jungo, C.1    Schenk, J.2    Pasquier, M.3    Marison, I.W.4    von Stockar, U.5
  • 25
    • 33947138087 scopus 로고    scopus 로고
    • Engineering primary metabolic pathways of industrial micro-organisms
    • Kern A, Tilley E, Hunter IS, Legisa M, Glieder A. 2007. Engineering primary metabolic pathways of industrial micro-organisms. J Biotechnol 129:6-29.
    • (2007) J Biotechnol , vol.129 , pp. 6-29
    • Kern, A.1    Tilley, E.2    Hunter, I.S.3    Legisa, M.4    Glieder, A.5
  • 26
    • 38449090607 scopus 로고    scopus 로고
    • Dynamic in vivo metabolome response of Saccharomyces cerevisiae to a stepwise perturbation of the ATP requirement for Benzoate Export
    • Kresnowati MTAP, van Winden WA, van Gulik WM, Heijnen JJ. 2008. Dynamic in vivo metabolome response of Saccharomyces cerevisiae to a stepwise perturbation of the ATP requirement for Benzoate Export. Biotechnol Bioeng 99:421-441.
    • (2008) Biotechnol Bioeng , vol.99 , pp. 421-441
    • Kresnowati, M.T.A.P.1    van Winden, W.A.2    van Gulik, W.M.3    Heijnen, J.J.4
  • 27
    • 0035014718 scopus 로고    scopus 로고
    • Central carbon metabolism of Saccharomyces cerevisiae explored by biosynthetic fractional 13C labeling of common amino acids
    • Maaheimo H, Fiaux J, Cakar ZP, Bailey JE, Sauer U, Szyperski T. 2001. Central carbon metabolism of Saccharomyces cerevisiae explored by biosynthetic fractional 13C labeling of common amino acids. Eur J Biochem 268:2464-2479.
    • (2001) Eur J Biochem , vol.268 , pp. 2464-2479
    • Maaheimo, H.1    Fiaux, J.2    Cakar, Z.P.3    Bailey, J.E.4    Sauer, U.5    Szyperski, T.6
  • 30
    • 34047177923 scopus 로고    scopus 로고
    • Metabolic flux analysis at ultra short time scale: Isotopically nonstationary 13C labeling experiments
    • Nöh K, Grönke K, Luo B, Takors R, Oldiges M, Wiechert W. 2007. Metabolic flux analysis at ultra short time scale: Isotopically nonstationary 13C labeling experiments. J Biotechnol 129:249-267.
    • (2007) J Biotechnol , vol.129 , pp. 249-267
    • Nöh, K.1    Grönke, K.2    Luo, B.3    Takors, R.4    Oldiges, M.5    Wiechert, W.6
  • 31
    • 34247347868 scopus 로고    scopus 로고
    • Sorbitol co-feeding reduces metabolic burden caused by theoverexpression of a Rhizopus oryzae lipase in Pichia pastoris
    • Ramon R, Ferrer P, Valero F. 2007. Sorbitol co-feeding reduces metabolic burden caused by theoverexpression of a Rhizopus oryzae lipase in Pichia pastoris. J Biotechnol 130:39-46.
    • (2007) J Biotechnol , vol.130 , pp. 39-46
    • Ramon, R.1    Ferrer, P.2    Valero, F.3
  • 32
    • 3042652967 scopus 로고    scopus 로고
    • Amino acid biosynthesis and metabolic flux profiling of Pichia pastoris
    • Sola A, Maaheimo H, Ylonen K, Ferrer P, Szyperski T. 2004. Amino acid biosynthesis and metabolic flux profiling of Pichia pastoris. Eur J Biochem 271:2462-2470.
    • (2004) Eur J Biochem , vol.271 , pp. 2462-2470
    • Sola, A.1    Maaheimo, H.2    Ylonen, K.3    Ferrer, P.4    Szyperski, T.5
  • 33
    • 33846268057 scopus 로고    scopus 로고
    • Metabolic flux profiling of Pichia pastoris grown on glycerol/ methanol mixtures in chemostat cultures at low and high dilution rates
    • Sola A, Jouhten P, Maaheimo H, Sanchez-Ferrando F, Szyperski T, Ferrer P. 2007. Metabolic flux profiling of Pichia pastoris grown on glycerol/ methanol mixtures in chemostat cultures at low and high dilution rates. Microbiology 153:281-290.
    • (2007) Microbiology , vol.153 , pp. 281-290
    • Sola, A.1    Jouhten, P.2    Maaheimo, H.3    Sanchez-Ferrando, F.4    Szyperski, T.5    Ferrer, P.6
  • 35
    • 0025866296 scopus 로고
    • Network rigidity and metabolic engineering in metabolite overproduction
    • Stephanopoulos G, Vallino JJ. 1991. Network rigidity and metabolic engineering in metabolite overproduction. Science 252:1675-1681.
    • (1991) Science , vol.252 , pp. 1675-1681
    • Stephanopoulos, G.1    Vallino, J.J.2
  • 36
    • 0034878314 scopus 로고    scopus 로고
    • Conversion of xylose to ethanol by recombinant Saccharomyces cerevisiae: Importance of xylulokinase (XKS1) and oxygen availability
    • Toivari MH, Aristidou A, Ruohonen L, Penttilä M. 2001. Conversion of xylose to ethanol by recombinant Saccharomyces cerevisiae: Importance of xylulokinase (XKS1) and oxygen availability. Metab Eng 3:236-249.
    • (2001) Metab Eng , vol.3 , pp. 236-249
    • Toivari, M.H.1    Aristidou, A.2    Ruohonen, L.3    Penttilä, M.4
  • 37
    • 0030051960 scopus 로고    scopus 로고
    • Effect of Vitreoscilla hemoglobin dosage on microaerobic Escherichia coli carbon and energy metabolism
    • Tsai PS, Hatzimanikatis V, Bailey JE. 1996. Effect of Vitreoscilla hemoglobin dosage on microaerobic Escherichia coli carbon and energy metabolism. Biotechnol Bioeng 49:139-150.
    • (1996) Biotechnol Bioeng , vol.49 , pp. 139-150
    • Tsai, P.S.1    Hatzimanikatis, V.2    Bailey, J.E.3
  • 38
    • 0032484705 scopus 로고    scopus 로고
    • Proposed mechanism of acetate accumulation in two recombinant Escherichia coli strains during high density fermentation
    • Van De Walle M, Shiloach J. 1998. Proposed mechanism of acetate accumulation in two recombinant Escherichia coli strains during high density fermentation. Biotechnol Bioeng 57:71-78.
    • (1998) Biotechnol Bioeng , vol.57 , pp. 71-78
    • Van De Walle, M.1    Shiloach, J.2
  • 39
    • 0035811896 scopus 로고    scopus 로고
    • Metabolic and kinetic analysis of poly(3-Hydroxybutyrate) production by recombinant Escherichia coli
    • Van Wegen RJ, Lee S-Y, Middelberg APJ. 2001. Metabolic and kinetic analysis of poly(3-Hydroxybutyrate) production by recombinant Escherichia coli. Biotechnol Bioeng 74:70-80.
    • (2001) Biotechnol Bioeng , vol.74 , pp. 70-80
    • Van Wegen, R.J.1    Lee, S.-Y.2    Middelberg, A.P.J.3
  • 40
    • 11144283607 scopus 로고    scopus 로고
    • Use of different carbon sources in cultivation of recombinant Pichia pastoris for angiostatin production
    • Xie J, Zhou Q, Du P, Gan R, Ye Q. 2005. Use of different carbon sources in cultivation of recombinant Pichia pastoris for angiostatin production. Enzyme Microb Tech 36:210-216.
    • (2005) Enzyme Microb Tech , vol.36 , pp. 210-216
    • Xie, J.1    Zhou, Q.2    Du, P.3    Gan, R.4    Ye, Q.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.